ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast57d11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009126.1| Triticum aestivum clone wl1n.pk0019.b5:fis, full ... 387 e-104
2gb|AY103666.1| Zea mays PCO119463 mRNA sequence 161 2e-36
3gb|AY530961.1| Zea mays dTDP-glucose 4,6-dehydratase mRNA, compl... 159 9e-36
4ref|NM_189435.1| Oryza sativa (japonica cultivar-group), predic... 125 1e-25
5dbj|AK070623.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
6gb|BT016798.1| Zea mays clone Contig631 mRNA sequence 88 3e-14
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
8dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
9gb|AY448013.1|AY448010S4 Ipomoea trifida haplotype S1 self-incom... 70 7e-09
10gb|BT013113.1| Lycopersicon esculentum clone 114400R, mRNA sequence 64 4e-07
11gb|AY391715.1| Nicotiana benthamiana UDP-D-apiose/UDP-D-xylose s... 58 2e-05
12gb|DQ345778.1| Solanum tuberosum UDP-apiose/xylose synthase (UAX... 56 1e-04
13gb|AC144731.15| Medicago truncatula clone mth2-5g18, complete se... 52 0.002
14ref|NM_128345.2| Arabidopsis thaliana AXS1 (UDP-D-APIOSE/UDP-D-X... 50 0.006
15gb|AY735589.1| Arabidopsis thaliana hypothetical protein AT2G278... 50 0.006
16gb|AY442191.1| Arabidopsis thaliana UDP-D-apiose/UDP-D-xylose sy... 50 0.006
17gb|BT001016.1| Arabidopsis thaliana At2g27860/F15K20.4 mRNA, com... 50 0.006
18gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 ma... 50 0.006
19gb|AF361574.1| Arabidopsis thaliana At2g27860/F15K20.4 mRNA, com... 50 0.006
20gb|AY086830.1| Arabidopsis thaliana clone 28205 mRNA, complete s... 50 0.006
21gb|AY924751.1| Arabidopsis thaliana hypothetical protein (At2g27... 50 0.006
22ref|NM_100694.2| Arabidopsis thaliana AXS2 (UDP-D-APIOSE/UDP-D-X... 44 0.38
23gb|AY042880.1| Arabidopsis thaliana similar to dihydroflavonol r... 44 0.38
24gb|AC011438.3|AC011438 Genomic sequence for Arabidopsis thaliana... 44 0.38
25gb|AY088462.1| Arabidopsis thaliana clone 6892 mRNA, complete se... 44 0.38
26gb|BT001220.1| Arabidopsis thaliana similar to dihydroflavonol r... 44 0.38
27ref|NM_129791.2| Arabidopsis thaliana ATP binding / kinase/ prot... 42 1.5
28gb|AC158976.14| Mus musculus chromosome 15, clone RP24-71M3, com... 42 1.5
29gb|AC116525.24| Mus musculus chromosome 15, clone RP24-352I18, c... 42 1.5
30ref|XM_751274.1| Ustilago maydis 521 hypothetical protein (UM002... 42 1.5
31gb|AC005956.4| Arabidopsis thaliana chromosome 2 clone MHK10 map... 42 1.5
32gb|AC010250.7| Homo sapiens chromosome 5 clone CTC-425H14, compl... 42 1.5
33gb|AC008447.8| Homo sapiens chromosome 5 clone CTC-340K5, comple... 42 1.5
34emb|BX820539.1|CNS0A9L9 Arabidopsis thaliana Full-length cDNA Co... 42 1.5
35emb|BX820275.1|CNS0A9OX Arabidopsis thaliana Full-length cDNA Co... 42 1.5
36gb|AC152823.3| Mus musculus BAC clone RP24-302N10 from chromosom... 42 1.5
37gb|AC025463.5|AC025463 Homo sapiens chromosome 5 clone CTD-2252L... 42 1.5
38dbj|BS000099.1| Pan troglodytes chromosome 22 clone:PTB-047E13, ... 42 1.5
39gb|AC154852.2| Mus musculus BAC clone RP23-33B19 from 16, comple... 42 1.5
40gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 5.9
41gb|M81719.1|WHTGBL1A Triticum aestivu storage protein (Gbl1) gen... 40 5.9
42ref|XM_322306.1| Neurospora crassa OR74A predicted protein (NCU0... 40 5.9
43ref|XM_951513.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.9
44gb|AC125014.8| Mus musculus chromosome 16, clone RP24-149C21, co... 40 5.9
45gb|AY317283.1| Mus musculus olfactory receptor Olfr198 (Olfr198)... 40 5.9
46gb|AC121290.6| Mus musculus chromosome 16, clone RP23-84N4, comp... 40 5.9
47ref|XM_382305.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 5.9
48ref|XM_567736.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 5.9
49ref|XM_805570.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.9
50ref|XM_808875.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.9
51gb|AY074074.1| Mus musculus olfactory receptor MOR182-8 pseudoge... 40 5.9
52gb|AC109630.2| Homo sapiens chromosome 15, clone RP11-624L4, com... 40 5.9
53gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 5.9
54gb|AC109219.13| Mus musculus chromosome 1, clone RP23-429I18, co... 40 5.9
55ref|NM_001011808.1| Mus musculus olfactory receptor 198 (Olfr198... 40 5.9
56gb|AC110232.15| Mus musculus chromosome 1, clone RP23-67H24, com... 40 5.9
57gb|M64372.1|BLYBEG1 Barley embryo globulin (BEG1) mRNA, complete... 40 5.9 
>gb|BT009126.1| Triticum aestivum clone wl1n.pk0019.b5:fis, full insert mRNA
           sequence
          Length = 692

 Score =  387 bits (195), Expect = e-104
 Identities = 222/231 (96%)
 Strand = Plus / Minus

                                                                       
Query: 206 gccgtcgtcgtctagcttgacggcgtcgccgtggccagacacatctgcgtcttgacagct 265
           |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||| 
Sbjct: 475 gccgtcatcgtctagcttgaaggcgtcgccgtggccagacacatctgcgtcttcacagcc 416

                                                                       
Query: 266 tccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttgagaggggtc 325
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 415 tccttgtaggtcttgtgctggtaggtcagcgtcgtctccagcaggtccttgagaggggtc 356

                                                                       
Query: 326 ttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttgtcactg 385
           ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 355 ttggggttccaccctagctgcttgttgatcagggtcatgtcagggatcctcttgtcgctg 296

                                                              
Query: 386 tcgtcgtacccttcgccgtagaattctttcgcactcacgtcgatcacaggc 436
           |||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 295 tcgtcgtacccttcgccgtagaattctttcgcgctcacgtcgaccacaggc 245



 Score =  153 bits (77), Expect = 6e-34
 Identities = 161/186 (86%), Gaps = 11/186 (5%)
 Strand = Plus / Minus

                                                                       
Query: 1   aacaaacactgccaccacaggtatgatagatactcagatactcggtcccttttgcccgat 60
           |||||||||||||||||||||||| |||||||||||| |        || ||||||| ||
Sbjct: 664 aacaaacactgccaccacaggtataatagatactcagtt--------ccctttgcccaat 613

                                                                       
Query: 61  atagggttacacaacgacgaatctaggtaagataaga-gatgggtgg-tgggatctagag 118
           |||||||||||||| |||||||||||||| | ||||| ||||||||| || |||||||||
Sbjct: 612 atagggttacacaatgacgaatctaggtagg-taagaagatgggtgggtgtgatctagag 554

                                                                       
Query: 119 gcgcgacaaaaacgacgacggtggtttcactatgacatccgtatccggcttccaaaagat 178
           ||||||||||||||||||||  |||||||||| || ||  ||||| ||||||||||||||
Sbjct: 553 gcgcgacaaaaacgacgacgacggtttcactacgatataagtatctggcttccaaaagat 494

                 
Query: 179 caagag 184
           ||||||
Sbjct: 493 caagag 488
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>gb|AY103666.1| Zea mays PCO119463 mRNA sequence
          Length = 1518

 Score =  161 bits (81), Expect = 2e-36
 Identities = 132/149 (88%)
 Strand = Plus / Minus

                                                                        
Query: 260  acagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttgaga 319
            |||||||| ||||| ||||||||||| || ||||| || ||||||||||| |||||||||
Sbjct: 1054 acagcttctttgtatgtcttgtgctgatacgtcagcgttgtctccagcagatccttgaga 995

                                                                        
Query: 320  ggggtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttg 379
            || ||||| |||||||| ||||||||||||||||| |  |||||||||||||||||||||
Sbjct: 994  ggcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttg 935

                                         
Query: 380  tcactgtcgtcgtacccttcgccgtagaa 408
            || || || ||||| ||||||||||||||
Sbjct: 934  tcgctatcatcgtatccttcgccgtagaa 906
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>gb|AY530961.1| Zea mays dTDP-glucose 4,6-dehydratase mRNA, complete cds
          Length = 1505

 Score =  159 bits (80), Expect = 9e-36
 Identities = 131/148 (88%)
 Strand = Plus / Minus

                                                                        
Query: 261  cagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttgagag 320
            ||||||| ||||| ||||||||||| || ||||| || ||||||||||| ||||||||||
Sbjct: 1278 cagcttctttgtatgtcttgtgctgatacgtcagcgttgtctccagcagatccttgagag 1219

                                                                        
Query: 321  gggtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttgt 380
            | ||||| |||||||| ||||||||||||||||| |  ||||||||||||||||||||||
Sbjct: 1218 gcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgt 1159

                                        
Query: 381  cactgtcgtcgtacccttcgccgtagaa 408
            | || || ||||| ||||||||||||||
Sbjct: 1158 cgctatcatcgtatccttcgccgtagaa 1131
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>ref|NM_189435.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1197

 Score =  125 bits (63), Expect = 1e-25
 Identities = 147/175 (84%)
 Strand = Plus / Minus

                                                                        
Query: 257  ttgacagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttg 316
            |||| |||||| ||||| |||||||||||||||||||  || ||||||||||  ||||||
Sbjct: 1163 ttgatagcttctttgtaagtcttgtgctggtaggtcaatgttgtctccagcaaatccttg 1104

                                                                        
Query: 317  agaggggtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctc 376
            ||||||||||| || ||||| || |||||||||||||| | ||||||||| || ||||||
Sbjct: 1103 agaggggtcttcggattccaaccaagctgcttgttgattatggtcatgtcaggaatcctc 1044

                                                                   
Query: 377  ttgtcactgtcgtcgtacccttcgccgtagaattctttcgcactcacgtcgatca 431
            || ||||| || || || ||||| || ||||| |  |||| ||||||||| ||||
Sbjct: 1043 ttatcactatcatcatatccttcaccatagaactgcttcgaactcacgtcaatca 989
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>dbj|AK070623.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063F13, full
            insert sequence
          Length = 1823

 Score =  125 bits (63), Expect = 1e-25
 Identities = 147/175 (84%)
 Strand = Plus / Minus

                                                                        
Query: 257  ttgacagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttg 316
            |||| |||||| ||||| |||||||||||||||||||  || ||||||||||  ||||||
Sbjct: 1331 ttgatagcttctttgtaagtcttgtgctggtaggtcaatgttgtctccagcaaatccttg 1272

                                                                        
Query: 317  agaggggtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctc 376
            ||||||||||| || ||||| || |||||||||||||| | ||||||||| || ||||||
Sbjct: 1271 agaggggtcttcggattccaaccaagctgcttgttgattatggtcatgtcaggaatcctc 1212

                                                                   
Query: 377  ttgtcactgtcgtcgtacccttcgccgtagaattctttcgcactcacgtcgatca 431
            || ||||| || || || ||||| || ||||| |  |||| ||||||||| ||||
Sbjct: 1211 ttatcactatcatcatatccttcaccatagaactgcttcgaactcacgtcaatca 1157
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>gb|BT016798.1| Zea mays clone Contig631 mRNA sequence
          Length = 1534

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 101/120 (84%)
 Strand = Plus / Minus

                                                                        
Query: 260  acagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttgaga 319
            |||||||| ||| | | |||| |||| || ||||| || ||||||||||| |||||||||
Sbjct: 1160 acagcttctttggatggcttgggctgatacgtcagcgttgtctccagcagatccttgaga 1101

                                                                        
Query: 320  ggggtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttg 379
            |||||||| ||| |||| |||||||| ||| |||| |  |||||| ||||||||||||||
Sbjct: 1100 ggggtctttggggtccaacctagctggttggtgattatagtcatggcggggatcctcttg 1041
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                            
Query: 257      ttgacagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttg 316
                |||| |||||| ||||| |||||||||||||||||||  || ||||||||||  ||||||
Sbjct: 42731615 ttgatagcttctttgtaagtcttgtgctggtaggtcaatgttgtctccagcaaatccttg 42731674

                                          
Query: 317      agaggggtcttggggttccaccctag 342
                ||||||||||| || ||||| |||||
Sbjct: 42731675 agaggggtcttcggattccaacctag 42731700



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 75/91 (82%)
 Strand = Plus / Plus

                                                                            
Query: 341      agctgcttgttgatcagggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcg 400
                |||||||||||||| | ||||||||| || |||||||| ||||| || || || ||||| 
Sbjct: 42731793 agctgcttgttgattatggtcatgtcaggaatcctcttatcactatcatcatatccttca 42731852

                                               
Query: 401      ccgtagaattctttcgcactcacgtcgatca 431
                || ||||| |  |||| ||||||||| ||||
Sbjct: 42731853 ccatagaactgcttcgaactcacgtcaatca 42731883
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>dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1656_A11
          Length = 148887

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                         
Query: 257   ttgacagcttccttgtaggtcttgtgctggtaggtcagagtcgtctccagcaggtccttg 316
             |||| |||||| ||||| |||||||||||||||||||  || ||||||||||  ||||||
Sbjct: 64380 ttgatagcttctttgtaagtcttgtgctggtaggtcaatgttgtctccagcaaatccttg 64439

                                       
Query: 317   agaggggtcttggggttccaccctag 342
             ||||||||||| || ||||| |||||
Sbjct: 64440 agaggggtcttcggattccaacctag 64465



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 75/91 (82%)
 Strand = Plus / Plus

                                                                         
Query: 341   agctgcttgttgatcagggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcg 400
             |||||||||||||| | ||||||||| || |||||||| ||||| || || || ||||| 
Sbjct: 64558 agctgcttgttgattatggtcatgtcaggaatcctcttatcactatcatcatatccttca 64617

                                            
Query: 401   ccgtagaattctttcgcactcacgtcgatca 431
             || ||||| |  |||| ||||||||| ||||
Sbjct: 64618 ccatagaactgcttcgaactcacgtcaatca 64648
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>gb|AY448013.1|AY448010S4 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig
             SR4
          Length = 87724

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                         
Query: 348   tgttgatcagggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgtaga 407
             ||||||| | ||||||||| || || |||||||||||||| || ||||| ||||||||||
Sbjct: 14313 tgttgattatggtcatgtctggaattctcttgtcactgtcatcatacccctcgccgtaga 14254

                    
Query: 408   attcttt 414
             |||||||
Sbjct: 14253 attcttt 14247
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>gb|BT013113.1| Lycopersicon esculentum clone 114400R, mRNA sequence
          Length = 1541

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                        
Query: 323  gtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttgtca 382
            ||||| |||||||| || |||||  ||||||| | ||||||||| || |||| |||||||
Sbjct: 1124 gtctttgggttccaaccgagctgtctgttgattatggtcatgtctggaatccgcttgtca 1065

                                            
Query: 383  ctgtcgtcgtacccttcgccgtagaattcttt 414
            ||||| || ||||| ||||| || ||||||||
Sbjct: 1064 ctgtcatcatacccctcgccataaaattcttt 1033
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>gb|AY391715.1| Nicotiana benthamiana UDP-D-apiose/UDP-D-xylose synthase (AXS1) mRNA,
            complete cds
          Length = 1164

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                     
Query: 358  ggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgtagaattcttt 414
            ||||||||| || || | |||||||||||| |||||||| |||||||| ||||||||
Sbjct: 1032 ggtcatgtctggaattcgcttgtcactgtcatcgtacccctcgccgtaaaattcttt 976
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>gb|DQ345778.1| Solanum tuberosum UDP-apiose/xylose synthase (UAXs) mRNA, complete
            cds
          Length = 1375

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                        
Query: 323  gtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttgtca 382
            ||||| |||||||| || |||||  ||||||| | ||||||||| || || | |||||||
Sbjct: 1105 gtctttgggttccaaccaagctgtctgttgattatggtcatgtctggaattcgcttgtca 1046

                                            
Query: 383  ctgtcgtcgtacccttcgccgtagaattcttt 414
            ||||| || ||||| ||||| || ||||||||
Sbjct: 1045 ctgtcatcatacccctcgccataaaattcttt 1014
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>gb|AC144731.15| Medicago truncatula clone mth2-5g18, complete sequence
          Length = 115175

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 77/94 (81%)
 Strand = Plus / Minus

                                                                         
Query: 323   gtcttggggttccaccctagctgcttgttgatcagggtcatgtcggggatcctcttgtca 382
             ||||| || ||||| || |||||||||||||| | |||||| || || || |||||||||
Sbjct: 13412 gtcttcggattccatccaagctgcttgttgatgatggtcatatcaggaattctcttgtca 13353

                                               
Query: 383   ctgtcgtcgtacccttcgccgtagaattctttcg 416
             || || || || || || ||||| ||||||||||
Sbjct: 13352 ctatcatcatatccctcaccgtaaaattctttcg 13319
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>ref|NM_128345.2| Arabidopsis thaliana AXS1 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 1)
            AT2G27860 (AXS1) mRNA, complete cds
          Length = 1516

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 358  ggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgtagaattcttt 414
            ||||||||| ||||| |||||||||||||| || || ||||| ||||| || |||||
Sbjct: 1093 ggtcatgtctgggattctcttgtcactgtcatcataaccttccccgtaaaactcttt 1037
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>gb|AY735589.1| Arabidopsis thaliana hypothetical protein AT2G27860 mRNA, complete
            cds
          Length = 1514

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 358  ggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgtagaattcttt 414
            ||||||||| ||||| |||||||||||||| || || ||||| ||||| || |||||
Sbjct: 1102 ggtcatgtctgggattctcttgtcactgtcatcataaccttccccgtaaaactcttt 1046
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>gb|AY442191.1| Arabidopsis thaliana UDP-D-apiose/UDP-D-xylose synthase (AXS1) mRNA,
            complete cds
          Length = 1170

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 358  ggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgtagaattcttt 414
            ||||||||| ||||| |||||||||||||| || || ||||| ||||| || |||||
Sbjct: 1038 ggtcatgtctgggattctcttgtcactgtcatcataaccttccccgtaaaactcttt 982
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>gb|BT001016.1| Arabidopsis thaliana At2g27860/F15K20.4 mRNA, complete cds
          Length = 1170

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 358  ggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgtagaattcttt 414
            ||||||||| ||||| |||||||||||||| || || ||||| ||||| || |||||
Sbjct: 1038 ggtcatgtctgggattctcttgtcactgtcatcataaccttccccgtaaaactcttt 982
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>gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 map B68, complete
             sequence
          Length = 118196

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                      
Query: 358   ggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgtagaattcttt 414
             ||||||||| ||||| |||||||||||||| || || ||||| ||||| || |||||
Sbjct: 14770 ggtcatgtctgggattctcttgtcactgtcatcataaccttccccgtaaaactcttt 14714
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>gb|AF361574.1| Arabidopsis thaliana At2g27860/F15K20.4 mRNA, complete cds
          Length = 1386

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 358  ggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgtagaattcttt 414
            ||||||||| ||||| |||||||||||||| || || ||||| ||||| || |||||
Sbjct: 1090 ggtcatgtctgggattctcttgtcactgtcatcataaccttccccgtaaaactcttt 1034
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>gb|AY086830.1| Arabidopsis thaliana clone 28205 mRNA, complete sequence
          Length = 1496

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 358  ggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgtagaattcttt 414
            ||||||||| ||||| |||||||||||||| || || ||||| ||||| || |||||
Sbjct: 1096 ggtcatgtctgggattctcttgtcactgtcatcataaccttccccgtaaaactcttt 1040
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>gb|AY924751.1| Arabidopsis thaliana hypothetical protein (At2g27860) mRNA, complete
            cds
          Length = 1170

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 358  ggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgtagaattcttt 414
            ||||||||| ||||| |||||||||||||| || || ||||| ||||| || |||||
Sbjct: 1038 ggtcatgtctgggattctcttgtcactgtcatcataaccttccccgtaaaactcttt 982
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>ref|NM_100694.2| Arabidopsis thaliana AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2)
            AT1G08200 (AXS2) mRNA, complete cds
          Length = 1672

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                        
Query: 349  gttgatcagggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgtagaa 408
            |||||| | ||||||||| ||||| |||||||| ||||| || || ||||| || || ||
Sbjct: 1150 gttgatgatggtcatgtctgggattctcttgtcgctgtcatcataaccttctccataaaa 1091

                                  
Query: 409  ttctttcgcactcacgtcgatc 430
             ||||| |  ||||||||||||
Sbjct: 1090 ctctttggagctcacgtcgatc 1069
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>gb|AY042880.1| Arabidopsis thaliana similar to dihydroflavonol reductase (T23G18.6)
            mRNA, complete cds
          Length = 1561

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                        
Query: 349  gttgatcagggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgtagaa 408
            |||||| | ||||||||| ||||| |||||||| ||||| || || ||||| || || ||
Sbjct: 1131 gttgatgatggtcatgtctgggattctcttgtcgctgtcatcataaccttctccataaaa 1072

                                  
Query: 409  ttctttcgcactcacgtcgatc 430
             ||||| |  ||||||||||||
Sbjct: 1071 ctctttggagctcacgtcgatc 1050
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>gb|AC011438.3|AC011438 Genomic sequence for Arabidopsis thaliana BAC T23G18 from chromosome I,
             complete sequence
          Length = 91470

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 67/82 (81%)
 Strand = Plus / Plus

                                                                         
Query: 349   gttgatcagggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgtagaa 408
             |||||| | ||||||||| ||||| |||||||| ||||| || || ||||| || || ||
Sbjct: 32386 gttgatgatggtcatgtctgggattctcttgtcgctgtcatcataaccttctccataaaa 32445

                                   
Query: 409   ttctttcgcactcacgtcgatc 430
              ||||| |  ||||||||||||
Sbjct: 32446 ctctttggagctcacgtcgatc 32467
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>gb|AY088462.1| Arabidopsis thaliana clone 6892 mRNA, complete sequence
          Length = 1573

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                        
Query: 349  gttgatcagggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgtagaa 408
            |||||| | ||||||||| ||||| |||||||| ||||| || || ||||| || || ||
Sbjct: 1149 gttgatgatggtcatgtctgggattctcttgtcgctgtcatcataaccttctccataaaa 1090

                                  
Query: 409  ttctttcgcactcacgtcgatc 430
             ||||| |  ||||||||||||
Sbjct: 1089 ctctttggagctcacgtcgatc 1068
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>gb|BT001220.1| Arabidopsis thaliana similar to dihydroflavonol reductase (At1g08200)
            mRNA, complete cds
          Length = 1212

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                        
Query: 349  gttgatcagggtcatgtcggggatcctcttgtcactgtcgtcgtacccttcgccgtagaa 408
            |||||| | ||||||||| ||||| |||||||| ||||| || || ||||| || || ||
Sbjct: 1047 gttgatgatggtcatgtctgggattctcttgtcgctgtcatcataaccttctccataaaa 988

                                  
Query: 409  ttctttcgcactcacgtcgatc 430
             ||||| |  ||||||||||||
Sbjct: 987  ctctttggagctcacgtcgatc 966
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>ref|NM_129791.2| Arabidopsis thaliana ATP binding / kinase/ protein serine/threonine
            kinase AT2G42290 mRNA, complete cds
          Length = 2213

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 123  gacaaaaacgacgacggtggtttca 147
            |||||| ||||||||||||||||||
Sbjct: 1051 gacaaagacgacgacggtggtttca 1075
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>gb|AC158976.14| Mus musculus chromosome 15, clone RP24-71M3, complete sequence
          Length = 182465

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 91   gataagagatgggtggtggga 111
            |||||||||||||||||||||
Sbjct: 4675 gataagagatgggtggtggga 4695
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>gb|AC116525.24| Mus musculus chromosome 15, clone RP24-352I18, complete sequence
          Length = 149726

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 91    gataagagatgggtggtggga 111
             |||||||||||||||||||||
Sbjct: 35520 gataagagatgggtggtggga 35500
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>ref|XM_751274.1| Ustilago maydis 521 hypothetical protein (UM00220.1) partial mRNA
          Length = 531

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 367 ggggatcctcttgtcactgtc 387
           |||||||||||||||||||||
Sbjct: 278 ggggatcctcttgtcactgtc 258
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>gb|AC005956.4| Arabidopsis thaliana chromosome 2 clone MHK10 map EG05C12, complete
            sequence
          Length = 85835

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 123  gacaaaaacgacgacggtggtttca 147
            |||||| ||||||||||||||||||
Sbjct: 1799 gacaaagacgacgacggtggtttca 1775
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>gb|AC010250.7| Homo sapiens chromosome 5 clone CTC-425H14, complete sequence
          Length = 157061

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 299   gtctccagcaggtccttgaga 319
             |||||||||||||||||||||
Sbjct: 52428 gtctccagcaggtccttgaga 52448
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>gb|AC008447.8| Homo sapiens chromosome 5 clone CTC-340K5, complete sequence
          Length = 159922

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 299    gtctccagcaggtccttgaga 319
              |||||||||||||||||||||
Sbjct: 148418 gtctccagcaggtccttgaga 148438
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>emb|BX820539.1|CNS0A9L9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH45ZG12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1580

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 123 gacaaaaacgacgacggtggtttca 147
           |||||| ||||||||||||||||||
Sbjct: 418 gacaaagacgacgacggtggtttca 442
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>emb|BX820275.1|CNS0A9OX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH16ZF04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1588

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 123 gacaaaaacgacgacggtggtttca 147
           |||||| ||||||||||||||||||
Sbjct: 468 gacaaagacgacgacggtggtttca 492
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>gb|AC152823.3| Mus musculus BAC clone RP24-302N10 from chromosome 15, complete
             sequence
          Length = 211214

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 91    gataagagatgggtggtggga 111
             |||||||||||||||||||||
Sbjct: 11608 gataagagatgggtggtggga 11588
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>gb|AC025463.5|AC025463 Homo sapiens chromosome 5 clone CTD-2252L7, complete sequence
          Length = 98070

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 299   gtctccagcaggtccttgaga 319
             |||||||||||||||||||||
Sbjct: 65684 gtctccagcaggtccttgaga 65704
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>dbj|BS000099.1| Pan troglodytes chromosome 22 clone:PTB-047E13, map 22, complete
              sequences
          Length = 231583

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 269    ttgtaggtcttgtgctggtaggtca 293
              |||||||| ||||||||||||||||
Sbjct: 154461 ttgtaggttttgtgctggtaggtca 154437
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>gb|AC154852.2| Mus musculus BAC clone RP23-33B19 from 16, complete sequence
          Length = 184760

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 168    ttccaaaagatcaagagggcc 188
              |||||||||||||||||||||
Sbjct: 142718 ttccaaaagatcaagagggcc 142738
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>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    gtcgtctccagcaggtcctt 315
              ||||||||||||||||||||
Sbjct: 379067 gtcgtctccagcaggtcctt 379086
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>gb|M81719.1|WHTGBL1A Triticum aestivu storage protein (Gbl1) gene, complete cds
          Length = 4747

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 180  aagagggccgtggccgaggc 199
            ||||||||||||||||||||
Sbjct: 1909 aagagggccgtggccgaggc 1928
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>ref|XM_322306.1| Neurospora crassa OR74A predicted protein (NCU00221.1) partial mRNA
          Length = 2328

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  caaaaacgacgacggtggtt 144
            ||||||||||||||||||||
Sbjct: 1767 caaaaacgacgacggtggtt 1748
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>ref|XM_951513.1| Neurospora crassa OR74A hypothetical protein (NCU00221.1) partial
            mRNA
          Length = 2328

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  caaaaacgacgacggtggtt 144
            ||||||||||||||||||||
Sbjct: 1767 caaaaacgacgacggtggtt 1748
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>gb|AC125014.8| Mus musculus chromosome 16, clone RP24-149C21, complete sequence
          Length = 177471

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aacaaacactgccaccacag 20
             ||||||||||||||||||||
Sbjct: 45759 aacaaacactgccaccacag 45778
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>gb|AY317283.1| Mus musculus olfactory receptor Olfr198 (Olfr198) gene, complete
          cds
          Length = 921

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 1  aacaaacactgccaccacag 20
          ||||||||||||||||||||
Sbjct: 39 aacaaacactgccaccacag 20
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>gb|AC121290.6| Mus musculus chromosome 16, clone RP23-84N4, complete sequence
          Length = 241184

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      aacaaacactgccaccacag 20
              ||||||||||||||||||||
Sbjct: 213585 aacaaacactgccaccacag 213604
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>ref|XM_382305.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02129.1)
            partial mRNA
          Length = 5295

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 346  cttgttgatcagggtcatgt 365
            ||||||||||||||||||||
Sbjct: 4032 cttgttgatcagggtcatgt 4013
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>ref|XM_567736.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNK01260) partial mRNA
          Length = 2108

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 gtcgtctccagcaggtcctt 315
           ||||||||||||||||||||
Sbjct: 231 gtcgtctccagcaggtcctt 212
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>ref|XM_805570.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508567.100) partial mRNA
          Length = 4218

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    aacaaacactgccaccacag 20
            ||||||||||||||||||||
Sbjct: 2987 aacaaacactgccaccacag 3006
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>ref|XM_808875.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053507649.100) partial mRNA
          Length = 4218

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    aacaaacactgccaccacag 20
            ||||||||||||||||||||
Sbjct: 2987 aacaaacactgccaccacag 3006
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>gb|AY074074.1| Mus musculus olfactory receptor MOR182-8 pseudogene, partial
          sequence
          Length = 919

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 1  aacaaacactgccaccacag 20
          ||||||||||||||||||||
Sbjct: 39 aacaaacactgccaccacag 20
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>gb|AC109630.2| Homo sapiens chromosome 15, clone RP11-624L4, complete sequence
          Length = 163976

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 345    gcttgttgatcagggtcatg 364
              ||||||||||||||||||||
Sbjct: 108105 gcttgttgatcagggtcatg 108124
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 186     gccgtggccgaggcagacgtgccg 209
               ||||||||||| ||||||||||||
Sbjct: 3987345 gccgtggccgatgcagacgtgccg 3987322
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>gb|AC109219.13| Mus musculus chromosome 1, clone RP23-429I18, complete sequence
          Length = 204942

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 270    tgtaggtcttgtgctggtag 289
              ||||||||||||||||||||
Sbjct: 107798 tgtaggtcttgtgctggtag 107817
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>ref|NM_001011808.1| Mus musculus olfactory receptor 198 (Olfr198), mRNA
          Length = 921

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 1  aacaaacactgccaccacag 20
          ||||||||||||||||||||
Sbjct: 39 aacaaacactgccaccacag 20
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>gb|AC110232.15| Mus musculus chromosome 1, clone RP23-67H24, complete sequence
          Length = 209668

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 270    tgtaggtcttgtgctggtag 289
              ||||||||||||||||||||
Sbjct: 179379 tgtaggtcttgtgctggtag 179360
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>gb|M64372.1|BLYBEG1 Barley embryo globulin (BEG1) mRNA, complete cds
          Length = 2122

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 180 aagagggccgtggccgaggc 199
           ||||||||||||||||||||
Sbjct: 497 aagagggccgtggccgaggc 516


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,645,470
Number of Sequences: 3902068
Number of extensions: 2645470
Number of successful extensions: 48191
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48063
Number of HSP's gapped (non-prelim): 127
length of query: 436
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 414
effective length of database: 17,147,199,772
effective search space: 7098940705608
effective search space used: 7098940705608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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