ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast57d05 |
|---|---|
| Clone Library Name | barley_pub |
>PORA_WHEAT (Q41578) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 388 Score = 176 bits (447), Expect = 2e-44 Identities = 88/95 (92%), Positives = 88/95 (92%) Frame = -2 Query: 442 PGLHRHHGAVREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSW 263 PG G REHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSW Sbjct: 294 PGCIATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSW 353 Query: 262 NKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 158 NKDSASFENQLSQEASDPEKARKVWELSEKLVGLA Sbjct: 354 NKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 388
>POR_AVESA (P15904) Protochlorophyllide reductase (EC 1.3.1.33) (PCR)| (NADPH-protochlorophyllide oxidoreductase) (POR) (Fragment) Length = 313 Score = 175 bits (443), Expect = 5e-44 Identities = 87/95 (91%), Positives = 87/95 (91%) Frame = -2 Query: 442 PGLHRHHGAVREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSW 263 PG G REHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVV EPSLTKSGVYWSW Sbjct: 219 PGCIATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVGEPSLTKSGVYWSW 278 Query: 262 NKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 158 NKDSASFENQLSQEASDPEKARKVWELSEKLVGLA Sbjct: 279 NKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 313
>PORA_HORVU (P13653) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 388 Score = 174 bits (441), Expect = 9e-44 Identities = 87/95 (91%), Positives = 87/95 (91%) Frame = -2 Query: 442 PGLHRHHGAVREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSW 263 PG G REHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEP LTKSGVYWSW Sbjct: 294 PGCIATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPVLTKSGVYWSW 353 Query: 262 NKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 158 NKDSASFENQLSQEASDPEKARKVWELSEKLVGLA Sbjct: 354 NKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 388
>POR_DAUCA (Q9SDT1) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 398 Score = 167 bits (422), Expect = 1e-41 Identities = 81/95 (85%), Positives = 87/95 (91%) Frame = -2 Query: 442 PGLHRHHGAVREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSW 263 PG G REHIPLFRTLFPPFQK++TKG+VSEAESGKRLAQVV+EPSLTKSGVYWSW Sbjct: 304 PGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSEAESGKRLAQVVSEPSLTKSGVYWSW 363 Query: 262 NKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 158 NKDSASFENQLS+EASD EKARKVWE+SEKLVGLA Sbjct: 364 NKDSASFENQLSEEASDVEKARKVWEVSEKLVGLA 398
>PORA_ARATH (Q42536) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 405 Score = 162 bits (409), Expect = 4e-40 Identities = 78/95 (82%), Positives = 86/95 (90%) Frame = -2 Query: 442 PGLHRHHGAVREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSW 263 PG G REHIPLFRTLFPPFQK++TKG+VSE+E+GKRLAQVVA+PSLTKSGVYWSW Sbjct: 311 PGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSESEAGKRLAQVVADPSLTKSGVYWSW 370 Query: 262 NKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 158 NK SASFENQLSQEASD EKAR+VWE+SEKLVGLA Sbjct: 371 NKTSASFENQLSQEASDVEKARRVWEVSEKLVGLA 405
>PORA_CUCSA (Q41249) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 398 Score = 161 bits (408), Expect = 6e-40 Identities = 79/95 (83%), Positives = 85/95 (89%) Frame = -2 Query: 442 PGLHRHHGAVREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSW 263 PG G REHIPLFR LFPPFQKF+T+G+VSE E+GKRLAQVV+EPSLTKSGVYWSW Sbjct: 304 PGCIATTGLFREHIPLFRILFPPFQKFITQGYVSEDEAGKRLAQVVSEPSLTKSGVYWSW 363 Query: 262 NKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 158 NK+SASFENQLSQEASD EKARKVWELSEKLVGLA Sbjct: 364 NKNSASFENQLSQEASDAEKARKVWELSEKLVGLA 398
>PORB_HORVU (Q42850) Protochlorophyllide reductase B, chloroplast precursor (EC| 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) Length = 395 Score = 161 bits (407), Expect = 8e-40 Identities = 78/95 (82%), Positives = 85/95 (89%) Frame = -2 Query: 442 PGLHRHHGAVREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSW 263 PG G REHIPLFR LFPPFQK++TKG+VSE E+GKRLAQVV+EPSLTKSGVYWSW Sbjct: 301 PGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVYWSW 360 Query: 262 NKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 158 NK+SASFENQLS+EASD EKARKVWELSEKLVGLA Sbjct: 361 NKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 395
>POR_PEA (Q01289) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 399 Score = 160 bits (405), Expect = 1e-39 Identities = 78/95 (82%), Positives = 84/95 (88%) Frame = -2 Query: 442 PGLHRHHGAVREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSW 263 PG G REHIPLFRTLFPPFQK++TKG+VSE ESGKRLAQVV++PSLTKSGVYWSW Sbjct: 305 PGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSEEESGKRLAQVVSDPSLTKSGVYWSW 364 Query: 262 NKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 158 N SASFENQLSQEASD EKARKVWE+SEKLVGLA Sbjct: 365 NNASASFENQLSQEASDAEKARKVWEVSEKLVGLA 399
>PORB_ARATH (P21218) Protochlorophyllide reductase B, chloroplast precursor (EC| 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) Length = 401 Score = 158 bits (399), Expect = 6e-39 Identities = 76/95 (80%), Positives = 83/95 (87%) Frame = -2 Query: 442 PGLHRHHGAVREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSW 263 PG G REHIPLFR LFPPFQK++TKG+VSE ESGKRLAQVV++PSLTKSGVYWSW Sbjct: 307 PGCIASTGLFREHIPLFRALFPPFQKYITKGYVSETESGKRLAQVVSDPSLTKSGVYWSW 366 Query: 262 NKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 158 N SASFENQLS+EASD EKARKVWE+SEKLVGLA Sbjct: 367 NNASASFENQLSEEASDVEKARKVWEISEKLVGLA 401
>PORC_ARATH (O48741) Protochlorophyllide reductase C, chloroplast precursor (EC| 1.3.1.33) (PCR C) (NADPH-protochlorophyllide oxidoreductase C) (POR C) Length = 401 Score = 150 bits (379), Expect = 1e-36 Identities = 71/95 (74%), Positives = 83/95 (87%) Frame = -2 Query: 442 PGLHRHHGAVREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSW 263 PG G REHIPLFR LFPPFQK++TKG+VSE E+GKRLAQVV++PSL KSGVYWSW Sbjct: 307 PGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLGKSGVYWSW 366 Query: 262 NKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 158 N +S+SFENQLS+EASD EKA+K+WE+SEKLVGLA Sbjct: 367 NNNSSSFENQLSKEASDAEKAKKLWEVSEKLVGLA 401
>POR_MARPA (O80333) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 458 Score = 145 bits (367), Expect = 3e-35 Identities = 65/94 (69%), Positives = 81/94 (86%) Frame = -2 Query: 442 PGLHRHHGAVREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSW 263 PG G R H+ LFRTLFPPFQK++TKG+VSE E+GKR+AQVV++P L+KSGVYWSW Sbjct: 364 PGCIAETGLFRNHVTLFRTLFPPFQKYITKGYVSEEEAGKRMAQVVSDPKLSKSGVYWSW 423 Query: 262 NKDSASFENQLSQEASDPEKARKVWELSEKLVGL 161 NKDS SFEN+LS+EAS+PEKA+++WELSE+L GL Sbjct: 424 NKDSGSFENELSEEASNPEKAKRLWELSERLSGL 457
>POR_CHLRE (Q39617) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 397 Score = 129 bits (325), Expect = 2e-30 Identities = 55/95 (57%), Positives = 75/95 (78%) Frame = -2 Query: 442 PGLHRHHGAVREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSW 263 PG G REH+PLF+TLFPPFQK++TKG+VSE E+G+RLA V+++P L KSG YWSW Sbjct: 302 PGCIAETGLFREHVPLFKTLFPPFQKYITKGYVSEEEAGRRLAAVISDPKLNKSGAYWSW 361 Query: 262 NKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 158 + + SF+NQ+S+E +D KA K+W++S KLVGL+ Sbjct: 362 SSTTGSFDNQVSEEVADDSKASKLWDISAKLVGLS 396
>POR_SYNY3 (Q59987) Light-dependent protochlorophyllide reductase (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) (LPOR) Length = 322 Score = 94.7 bits (234), Expect = 9e-20 Identities = 49/98 (50%), Positives = 67/98 (68%), Gaps = 4/98 (4%) Frame = -2 Query: 442 PGLHRHHGAVREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSW 263 PG R H LFRT+FP FQK VTKG+VS+ +G+R+A VVA+ SGV+WSW Sbjct: 224 PGCVADTPLFRNHYSLFRTIFPWFQKNVTKGYVSQELAGERVAMVVADDKFKDSGVHWSW 283 Query: 262 -NKDSA---SFENQLSQEASDPEKARKVWELSEKLVGL 161 N+ A +F +LS++ SD +KA+++W+LSEKLVGL Sbjct: 284 GNRQQAGREAFVQELSEQGSDAQKAQRMWDLSEKLVGL 321
>POR_PLEBO (O66148) Light-dependent protochlorophyllide reductase (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) (LPOR) Length = 322 Score = 92.4 bits (228), Expect = 4e-19 Identities = 46/99 (46%), Positives = 66/99 (66%), Gaps = 4/99 (4%) Frame = -2 Query: 442 PGLHRHHGAVREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSW 263 PG R +P+F+ +FP FQK +T G+VS+ +G+R AQVVA+P +SGV+WSW Sbjct: 224 PGCVADTPLFRNSLPVFQKVFPWFQKNITGGYVSQELAGERTAQVVADPEFKQSGVHWSW 283 Query: 262 ----NKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 158 + SF +LS++ +D KA+++WELSEKLVGLA Sbjct: 284 GNRQKEGRESFVQELSEKVTDDAKAKRMWELSEKLVGLA 322
>FIG2_YEAST (P25653) Factor-induced gene 2 precursor (Cell wall adhesin FIG2)| Length = 1609 Score = 37.4 bits (85), Expect = 0.017 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 2/103 (1%) Frame = +3 Query: 120 RCMHASMGFAVDHASPTSFSLSSQTLRAFSGSLASWESWFSKDAESLFQLQYTPDFV--R 293 R H+S F + +P+S SL S T F+ S+ +SW S ++E L T DF Sbjct: 140 RTSHSSSSFELPVTAPSSSSLPSSTSLTFT-SVNPSQSWTSFNSEKSSALSSTIDFTSSE 198 Query: 294 LGSATTCASLLPDSASDTNPLVTNFWNGGKRVRNSGMCSRTAP 422 + +T+ SL + DT +T+ ++ +NS S +P Sbjct: 199 ISGSTSPKSL---ESFDTTGTITSSYSPSPSSKNSNQTSLLSP 238
>RDH14_HUMAN (Q9HBH5) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol| dehydrogenase PAN2) Length = 336 Score = 35.0 bits (79), Expect = 0.082 Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 2/96 (2%) Frame = -2 Query: 442 PGLHRHHGAVREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTK--SGVYW 269 PG+ R + HIPL L P V+ F G + + +A + SG Y+ Sbjct: 247 PGIVRTNLGRHIHIPL---LVKPLFNLVSWAFFKTPVEGAQTSIYLASSPEVEGVSGRYF 303 Query: 268 SWNKDSASFENQLSQEASDPEKARKVWELSEKLVGL 161 K E +L +A D ARK+W++SE +VGL Sbjct: 304 GDCK-----EEELLPKAMDESVARKLWDISEVMVGL 334
>RDH13_MOUSE (Q8CEE7) Retinol dehydrogenase 13 (EC 1.1.1.-)| Length = 334 Score = 33.9 bits (76), Expect = 0.18 Identities = 22/56 (39%), Positives = 30/56 (53%) Frame = -2 Query: 307 VAEPSLTKSGVYWSWNKDSASFENQLSQEASDPEKARKVWELSEKLVGLA*STANP 140 VAE SG Y+ ++ A S EA D E AR++W S +LVGLA + +P Sbjct: 276 VAEELENVSGKYFDGLREKAP-----SPEAEDEEVARRLWTESARLVGLAMAHGSP 326
>RDH14_MOUSE (Q9ERI6) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol| dehydrogenase PAN2) Length = 334 Score = 33.1 bits (74), Expect = 0.31 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 1/95 (1%) Frame = -2 Query: 442 PGLHRHHGAVREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTK-SGVYWS 266 PG+ R + HIPL P F F + E + + P + SG Y+ Sbjct: 245 PGIVRTNLGRHIHIPLLAR--PLFNLVSWAFFKTPLEGAQTSIYLACSPDVEGVSGRYFG 302 Query: 265 WNKDSASFENQLSQEASDPEKARKVWELSEKLVGL 161 K E +L +A D ARK+W++SE +VG+ Sbjct: 303 DCK-----EEELLPKAMDESVARKLWDISEVMVGI 332
>RDH13_HUMAN (Q8NBN7) Retinol dehydrogenase 13 (EC 1.1.1.-)| Length = 331 Score = 30.8 bits (68), Expect = 1.6 Identities = 20/49 (40%), Positives = 25/49 (51%) Frame = -2 Query: 307 VAEPSLTKSGVYWSWNKDSASFENQLSQEASDPEKARKVWELSEKLVGL 161 VAE SG Y+ K A + EA D E AR++W S +LVGL Sbjct: 276 VAEELADVSGKYFDGLKQKAP-----APEAEDEEVARRLWAESARLVGL 319
>WWOX_MOUSE (Q91WL8) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 414 Score = 29.6 bits (65), Expect = 3.5 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -2 Query: 229 SQEASDPEKARKVWELSEKLV 167 S+EA E AR +WELSE+L+ Sbjct: 385 SEEAQSEETARALWELSERLI 405
>VKGC_RAT (O88496) Vitamin K-dependent gamma-carboxylase (EC 6.4.-.-)| (Gamma-glutamyl carboxylase) (Vitamin K gamma glutamyl carboxylase) Length = 758 Score = 29.6 bits (65), Expect = 3.5 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -2 Query: 442 PGLHRHHGAVREHIPLFRTLFPPFQKFVTKGF 347 PGL H G V + L LF P+ F+T+G+ Sbjct: 356 PGLRHHLGTVFTLLYLLEQLFLPYSHFLTQGY 387
>AMYI_SACDI (P29760) Glucoamylase S2 precursor (EC 3.2.1.3) (Glucan| 1,4-alpha-glucosidase) (1,4-alpha-D-glucan glucohydrolase) (GAII) Length = 768 Score = 29.3 bits (64), Expect = 4.5 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -2 Query: 310 VVAEPSLTKSGVYWSWNKDSASFENQLSQEASDP 209 V+A PS T ++ W +DSA N + ++DP Sbjct: 372 VIASPSQTHPDYFYQWIRDSALTINSIVSHSADP 405
>RGS16_BOVIN (O46471) Regulator of G-protein signaling 16 (RGS16) (Retinally| abundant regulator of G-protein signaling) (RGS-R) Length = 202 Score = 29.3 bits (64), Expect = 4.5 Identities = 20/80 (25%), Positives = 31/80 (38%) Frame = +3 Query: 123 CMHASMGFAVDHASPTSFSLSSQTLRAFSGSLASWESWFSKDAESLFQLQYTPDFVRLGS 302 C A +DH + + Q A A W+ + +S + +P + L + Sbjct: 123 CSEAPKEVNIDHETRELTRTNLQAATAVCFDAAQWKVRALMEKDSYPRFLKSPAYRDLAT 182 Query: 303 ATTCASLLPDSASDTNPLVT 362 T AS P S+S PL T Sbjct: 183 QATAASASPSSSSPAEPLHT 202
>AMYH_SACDI (P04065) Glucoamylase S1 precursor (EC 3.2.1.3) (Glucan| 1,4-alpha-glucosidase) (1,4-alpha-D-glucan glucohydrolase) (GAI) Length = 767 Score = 29.3 bits (64), Expect = 4.5 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -2 Query: 310 VVAEPSLTKSGVYWSWNKDSASFENQLSQEASDP 209 V+A PS T ++ W +DSA N + ++DP Sbjct: 371 VIASPSQTHPDYFYQWIRDSALTINSIVSHSADP 404
>RFIP3_HUMAN (O75154) Rab11 family-interacting protein 3 (Rab11-FIP3) (EF| hands-containing Rab-interacting protein) (Eferin) Length = 756 Score = 28.9 bits (63), Expect = 5.9 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = -1 Query: 437 AASPPRGCPGAHPAVPDPLPAVPE 366 A++PP PG+ P PDP P P+ Sbjct: 2 ASAPPASPPGSEPPGPDPEPGGPD 25
>TIE2_BRARE (O73791) Tyrosine-protein kinase receptor Tie-2 precursor (EC| 2.7.10.1) Length = 1116 Score = 28.9 bits (63), Expect = 5.9 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +3 Query: 111 RRPRCMHASMGFAVDHASPTSFSLSSQTLRAFSGSLASWESWFSK 245 R+ R + FA+ H T+ +LSSQ L AFS +A S+ S+ Sbjct: 907 RKSRVLETDPAFAIAHR--TASTLSSQQLLAFSADVARGMSYLSQ 949
>VGLE_HHV1F (Q703F0) Glycoprotein E precursor| Length = 552 Score = 28.9 bits (63), Expect = 5.9 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 14/69 (20%) Frame = +3 Query: 273 YTPDFV--RLGSATTCASL-----------LPDSASDTN-PLVTNFWNGGKRVRNSGMCS 410 YT D V R T+CA + LP+ S + P + W VR+ CS Sbjct: 258 YTMDVVWLRFDVPTSCAEMRIYESCLYHPQLPECLSPADAPCAASTWTSRLAVRSYAGCS 317 Query: 411 RTAPWWRCS 437 RT P RCS Sbjct: 318 RTNPPPRCS 326
>HIC1_CHICK (Q90850) Hypermethylated in cancer 1 protein (Hic-1) (GammaFBP)| (Fragment) Length = 676 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = -1 Query: 431 SPPRGCPGAHPAVPDPLPAVP 369 SPP G PG HP DP + P Sbjct: 296 SPPGGEPGGHPHATDPFRSTP 316
>NIFK_THIFE (P15052) Nitrogenase molybdenum-iron protein beta chain (EC| 1.18.6.1) (Nitrogenase component I) (Dinitrogenase) Length = 518 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = -2 Query: 247 SFENQL-SQEASDPEKARKVWELSEKLVGLA*STANPMDACMHLGR 113 +FEN+L + + + ++ K WE EK + NP AC LGR Sbjct: 30 TFENRLPADQVARGQEWTKTWEYREKNFAREALSVNPDKACQPLGR 75
>AFSK_STRCO (P54741) Serine/threonine protein kinase afsK (EC 2.7.11.1)| Length = 799 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/21 (61%), Positives = 13/21 (61%) Frame = -1 Query: 428 PPRGCPGAHPAVPDPLPAVPE 366 P G GA PAVP P PA PE Sbjct: 400 PRPGVNGADPAVPAPAPAPPE 420
>WWOX_BRARE (Q803A8) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 412 Score = 28.5 bits (62), Expect = 7.7 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = -2 Query: 229 SQEASDPEKARKVWELSEKLV 167 S +A DP A +WELSE+LV Sbjct: 382 SPQAQDPAAALSLWELSERLV 402
>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (hCOP1) Length = 731 Score = 28.5 bits (62), Expect = 7.7 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%) Frame = +3 Query: 117 PRCMHASMGFAVDHASPTSFSLSSQTLRA--FSGSLASWESWFSKDAESLFQLQYTPDFV 290 P H+S+ + +++ P FS SSQT + ++ +LAS + E L Q ++ Sbjct: 318 PSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMS 377 Query: 291 RLGSATTCASLLPD 332 R+ + AS L + Sbjct: 378 RISDDSRTASQLDE 391 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,409,968 Number of Sequences: 219361 Number of extensions: 907163 Number of successful extensions: 3488 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 3299 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3467 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
