>Y1594_HAEIN (P44265) Hypothetical protein HI1594|
          Length = 223

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -1

Query: 241 VRPKDEEKNLAIMSSL*HIIGVTETSPAVAIERLYE 134
           V+P  E +N++I  S  H+I ++  +P V+I+  YE
Sbjct: 126 VKPSLEAENISIGKSSSHLINISGLNPEVSIKSEYE 161

>YEHS_ECOLI (P33355) Hypothetical protein yehS|
          Length = 156

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 9/59 (15%)
 Frame = -1

Query: 292 LLPRAAMDVFTEEIAVWVRPKDEE-----KNLAIMSSL*HII----GVTETSPAVAIER 143
           +L    ++   E+IAVW+R +DEE      ++ + S L  +I    G  E++PA+  ER
Sbjct: 24  ILALGNVEATAEQIAVWLRKEDEEGFQRCPDIVLSSFLNGLIYEKRGKDESAPALEPER 82

>PRR1_SCHPO (O14283) Transcription factor prr1 (Pombe response regulator 1)|
          Length = 539

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 195 SELIMAKFFSSSLGLTHTAISSVNTSIAALGSSIDTTG 308
           S   MAK FS     +    SSV TS++ +G+++ TTG
Sbjct: 325 SNASMAKSFSQISNDSLAKASSVATSMSQMGAAVPTTG 362


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,164,975
Number of Sequences: 219361
Number of extensions: 650915
Number of successful extensions: 1356
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 80,573,946
effective HSP length: 80
effective length of database: 63,025,066
effective search space used: 1512601584
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)