ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast57b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) ... 109 7e-21
2gb|AY641406.1| Hordeum vulgare subsp. vulgare putative NBS-LRR p... 103 4e-19
3gb|AY641407.1| Hordeum vulgare subsp. vulgare nonfunctional Muta... 60 6e-06
4gb|AC109666.7| Rattus norvegicus 4 BAC CH230-252C14 (Children's ... 46 0.084
5gb|AY945934.1| Homo sapiens solute carrier organic anion transpo... 46 0.084
6gb|AC022335.8| Homo sapiens 12p BAC RP11-125O5 (Rosewell Park Ca... 46 0.084
7gb|AY223476.1| Crimean-Congo hemorrhagic fever virus strain Hodz... 44 0.33
8gb|AY179962.1| Crimean-Congo hemorrhagic fever virus patient TAD... 44 0.33
9gb|AC163089.3| Mus musculus chromosome 5, clone RP23-346P15, com... 44 0.33
10gb|AC067964.18| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-3... 44 0.33
11gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
12gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.3
13dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
14dbj|AK121173.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
15gb|AC123942.4| Mus musculus BAC clone RP23-470C23 from 1, comple... 42 1.3
16dbj|AP002768.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.3
17emb|AL928661.10| Mouse DNA sequence from clone RP23-3E2 on chrom... 42 1.3
18gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
19emb|AL683893.26| Mouse DNA sequence from clone RP23-122N18 on ch... 42 1.3
20gb|AE008443.1| Streptococcus pneumoniae R6 section 59 of 184 of ... 40 5.2
21ref|XM_369115.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 40 5.2
22ref|XM_953474.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.2
23ref|XM_331454.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.2
24gb|AC154442.3| Mus musculus BAC clone RP24-178L2 from chromosome... 40 5.2
25gb|AC024957.9| Mus musculus chromosome 16, clone RP23-178A24, co... 40 5.2
26gb|AC115733.14| Mus musculus chromosome 16, clone RP23-466L17, c... 40 5.2
27emb|AL844184.14| Mouse DNA sequence from clone RP23-284N18 on ch... 40 5.2
28gb|AC098879.3| Mus musculus BAC clone RP23-121N21 from X, comple... 40 5.2
29emb|AL137139.9| Human DNA sequence from clone RP11-134O15 on chr... 40 5.2
30emb|AL662783.13| Mouse DNA sequence from clone RP23-378N18 on ch... 40 5.2
31gb|AC090897.4| Homo sapiens chromosome 18, clone RP11-61D1, comp... 40 5.2
32dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, comp... 40 5.2
33dbj|AB192511.1| Sus scrofa genomic DNA, chromosome 7, BAC clone:... 40 5.2
34gb|AC005037.2| Homo sapiens BAC clone RP11-469M7 from 2, complet... 40 5.2
35gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome 40 5.2
36emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 5.2
37dbj|AP001979.7| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 5.2
38gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete s... 40 5.2
39gb|AE000657.1| Aquifex aeolicus VF5, complete genome 40 5.2
40emb|CT009632.14| Mouse DNA sequence from clone RP23-5G10 on chro... 40 5.2
41emb|CT033749.8| Mouse DNA sequence from clone RP23-14N10 on chro... 40 5.2
42emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 5.2 
>gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) pseudogene,
           complete cds
          Length = 15688

 Score =  109 bits (55), Expect = 7e-21
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                       
Query: 307 acccccatccatcccgtccctcgcgccgacgctaggcggatcctgcgcgtccttgcacac 366
           ||||||||||||||  ||||||||| |||||| ||||| |||| ||||||||||||||||
Sbjct: 658 acccccatccatccaatccctcgcggcgacgcaaggcgaatccagcgcgtccttgcacac 717

                                  
Query: 367 cgccacgccggtcggcgcgccgc 389
           |||||||||||||||| ||||||
Sbjct: 718 cgccacgccggtcggcccgccgc 740



 Score =  105 bits (53), Expect = 1e-19
 Identities = 62/65 (95%)
 Strand = Plus / Plus

                                                                       
Query: 226 catccactgaaccagcaccgaccaccagagcacggtgaccatgccagccgatgaggagga 285
           |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||
Sbjct: 589 catccactgaaccagcaccgacaactggagcacggtgaccatgccagccgatgaggagga 648

                
Query: 286 cgccg 290
           |||||
Sbjct: 649 cgccg 653
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>gb|AY641406.1| Hordeum vulgare subsp. vulgare putative NBS-LRR protein-like gene,
            complete sequence
          Length = 3944

 Score =  103 bits (52), Expect = 4e-19
 Identities = 61/64 (95%)
 Strand = Plus / Minus

                                                                        
Query: 226  catccactgaaccagcaccgaccaccagagcacggtgaccatgccagccgatgaggagga 285
            |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||
Sbjct: 3353 catccactgaaccagcaccgacaactggagcacggtgaccatgccagccgatgaggagga 3294

                
Query: 286  cgcc 289
            ||||
Sbjct: 3293 cgcc 3290



 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                        
Query: 309  ccccatccatcccgtccctcgcgccgacgctaggcggatcctgcgcgtccttgcacaccg 368
            ||||||||||||  |||||||||||||| | ||||| |||| ||||||||||||||||||
Sbjct: 3283 ccccatccatccaatccctcgcgccgacacaaggcgaatccagcgcgtccttgcacaccg 3224

                          
Query: 369  ccacgccggtcggc 382
            ||||||||||||||
Sbjct: 3223 ccacgccggtcggc 3210
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>gb|AY641407.1| Hordeum vulgare subsp. vulgare nonfunctional Mutator-like transposase
            gene, complete sequence
          Length = 10100

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                  
Query: 182  tatcatatcagtaaatctgaacttggtgtctacagcagcatcatcatccactga 235
            |||||||||| |||||| || |||| ||||||||||| ||||| ||||||||||
Sbjct: 4064 tatcatatcactaaatccgagcttgttgtctacagcaacatcaccatccactga 4117
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>gb|AC109666.7| Rattus norvegicus 4 BAC CH230-252C14 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 214386

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 145   aacagaaccgaacacaacaaaacacca 171
             |||||||| ||||||||||||||||||
Sbjct: 59028 aacagaacggaacacaacaaaacacca 59054
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>gb|AY945934.1| Homo sapiens solute carrier organic anion transporter family, member
             1B1 (SLCO1B1) gene, complete cds
          Length = 112510

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 158   acaacaaaacaccatctttctacctat 184
             ||||||||||||||||||||| |||||
Sbjct: 72445 acaacaaaacaccatctttctgcctat 72419
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>gb|AC022335.8| Homo sapiens 12p BAC RP11-125O5 (Rosewell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 151886

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 158   acaacaaaacaccatctttctacctat 184
             ||||||||||||||||||||| |||||
Sbjct: 57748 acaacaaaacaccatctttctgcctat 57774
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>gb|AY223476.1| Crimean-Congo hemorrhagic fever virus strain Hodzha segment M,
           complete sequence
          Length = 5356

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 143 acaacagaaccgaacacaacaaaaca 168
           ||||| ||||||||||||||||||||
Sbjct: 163 acaacggaaccgaacacaacaaaaca 188
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>gb|AY179962.1| Crimean-Congo hemorrhagic fever virus patient TADJ/HU8966 envelope
           glycoprotein precursor, gene, complete cds
          Length = 5304

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 143 acaacagaaccgaacacaacaaaaca 168
           ||||| ||||||||||||||||||||
Sbjct: 139 acaacggaaccgaacacaacaaaaca 164
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>gb|AC163089.3| Mus musculus chromosome 5, clone RP23-346P15, complete sequence
          Length = 197826

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 214   cagcagcatcatcatccactgaacca 239
             |||||||||| |||||||||||||||
Sbjct: 33255 cagcagcatcttcatccactgaacca 33230
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>gb|AC067964.18| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-337K7, complete sequence
          Length = 219769

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 214    cagcagcatcatcatccactgaacca 239
              |||||||||| |||||||||||||||
Sbjct: 176948 cagcagcatcttcatccactgaacca 176923
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>gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0041C22, complete sequence
          Length = 161172

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 112   cctctcttctgttctttcttc 132
             |||||||||||||||||||||
Sbjct: 92412 cctctcttctgttctttcttc 92392
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 289     cgcctcgggcttcctcccaccccca 313
               |||||||||||||||||| ||||||
Sbjct: 2453983 cgcctcgggcttcctcccgccccca 2453959
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 112      cctctcttctgttctttcttc 132
                |||||||||||||||||||||
Sbjct: 14869346 cctctcttctgttctttcttc 14869326
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>dbj|AK121173.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081K07, full
           insert sequence
          Length = 689

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 112 cctctcttctgttctttcttc 132
           |||||||||||||||||||||
Sbjct: 541 cctctcttctgttctttcttc 561
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>gb|AC123942.4| Mus musculus BAC clone RP23-470C23 from 1, complete sequence
          Length = 170567

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 169   ccatctttctacctatcatat 189
             |||||||||||||||||||||
Sbjct: 68710 ccatctttctacctatcatat 68690
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>dbj|AP002768.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-673F18, complete
              sequence
          Length = 186084

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 296    ggcttcctcccacccccatccatcc 320
              ||||||||||||||||||| |||||
Sbjct: 126254 ggcttcctcccacccccattcatcc 126278
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>emb|AL928661.10| Mouse DNA sequence from clone RP23-3E2 on chromosome 4, complete sequence
          Length = 221208

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 145    aacagaaccgaacacaacaaaacac 169
              ||||||||||||||||||| |||||
Sbjct: 127036 aacagaaccgaacacaacagaacac 127060
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 112      cctctcttctgttctttcttc 132
                |||||||||||||||||||||
Sbjct: 14949313 cctctcttctgttctttcttc 14949293
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>emb|AL683893.26| Mouse DNA sequence from clone RP23-122N18 on chromosome 4, complete
             sequence
          Length = 204841

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 111   gcctctcttctgttctttctt 131
             |||||||||||||||||||||
Sbjct: 75326 gcctctcttctgttctttctt 75346
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>gb|AE008443.1| Streptococcus pneumoniae R6 section 59 of 184 of the complete genome
          Length = 11402

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 111  gcctctcttctgttctttcttcac 134
            ||||||||||||||| ||||||||
Sbjct: 1241 gcctctcttctgttcattcttcac 1264
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>ref|XM_369115.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00129.4) partial mRNA
          Length = 1095

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 284 gacgccgcctcgggcttcct 303
           ||||||||||||||||||||
Sbjct: 416 gacgccgcctcgggcttcct 397
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>ref|XM_953474.1| Neurospora crassa OR74A hypothetical protein (NCU09063.1) partial
           mRNA
          Length = 4935

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 214 cagcagcatcatcatccactgaaccagcaccg 245
           |||||||||||||||| |||| ||| ||||||
Sbjct: 224 cagcagcatcatcatcaactgcaccggcaccg 255
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>ref|XM_331454.1| Neurospora crassa OR74A hypothetical protein (NCU09063.1) partial
           mRNA
          Length = 4935

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 214 cagcagcatcatcatccactgaaccagcaccg 245
           |||||||||||||||| |||| ||| ||||||
Sbjct: 224 cagcagcatcatcatcaactgcaccggcaccg 255
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>gb|AC154442.3| Mus musculus BAC clone RP24-178L2 from chromosome 17, complete sequence
          Length = 177231

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 113    ctctcttctgttctttcttc 132
              ||||||||||||||||||||
Sbjct: 134449 ctctcttctgttctttcttc 134468
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>gb|AC024957.9| Mus musculus chromosome 16, clone RP23-178A24, complete sequence
          Length = 229563

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   cctcccacccccatccatcc 320
             ||||||||||||||||||||
Sbjct: 94030 cctcccacccccatccatcc 94011
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>gb|AC115733.14| Mus musculus chromosome 16, clone RP23-466L17, complete sequence
          Length = 203973

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    ggcttcctcccacccccatc 315
              ||||||||||||||||||||
Sbjct: 108764 ggcttcctcccacccccatc 108783
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>emb|AL844184.14| Mouse DNA sequence from clone RP23-284N18 on chromosome X, complete
              sequence
          Length = 148500

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 295    gggcttcctcccacccccat 314
              ||||||||||||||||||||
Sbjct: 116701 gggcttcctcccacccccat 116682
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>gb|AC098879.3| Mus musculus BAC clone RP23-121N21 from X, complete sequence
          Length = 195929

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 295    gggcttcctcccacccccat 314
              ||||||||||||||||||||
Sbjct: 100556 gggcttcctcccacccccat 100537
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>emb|AL137139.9| Human DNA sequence from clone RP11-134O15 on chromosome 13 Contains the
             3' end of the CLYBL gene for citrate lyase beta like (CLB
             bA134O15.1) and a CpG island, complete sequence
          Length = 174128

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 298   cttcctcccacccccatccatccc 321
             ||||||||||||||||||| ||||
Sbjct: 43878 cttcctcccacccccatccttccc 43855
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>emb|AL662783.13| Mouse DNA sequence from clone RP23-378N18 on chromosome 11 Contains the
             5' end of a novel gene, a novel gene (4933430M04Rik) and a
             pseudogene similar to part of DEAD (Asp-Glu-Ala-Asp) box
             polypeptide 5 (Ddx5), complete sequence
          Length = 181503

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   ctctcttctgttctttcttc 132
             ||||||||||||||||||||
Sbjct: 61025 ctctcttctgttctttcttc 61044
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>gb|AC090897.4| Homo sapiens chromosome 18, clone RP11-61D1, complete sequence
          Length = 157606

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   tcatatcagtaaatctgaac 203
             ||||||||||||||||||||
Sbjct: 54412 tcatatcagtaaatctgaac 54431
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>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence
          Length = 1857073

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 7       aaggaaatttatcttatcga 26
               ||||||||||||||||||||
Sbjct: 1360932 aaggaaatttatcttatcga 1360913
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>dbj|AB192511.1| Sus scrofa genomic DNA, chromosome 7, BAC clone: L014P15, complete
              sequence
          Length = 164132

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 140    gacacaacagaaccgaacacaacaaaacacca 171
              ||||||||| |||  |||||||||||||||||
Sbjct: 119263 gacacaacaaaacaaaacacaacaaaacacca 119294
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>gb|AC005037.2| Homo sapiens BAC clone RP11-469M7 from 2, complete sequence
          Length = 190508

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    acaacaaaacaccatctttc 177
              ||||||||||||||||||||
Sbjct: 151581 acaacaaaacaccatctttc 151562
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>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome
          Length = 2160842

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 111    gcctctcttctgttctttcttcac 134
              ||||||||||||||| ||||||||
Sbjct: 702707 gcctctcttctgttcattcttcac 702730
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 364    caccgccacgccggtcggcg 383
              ||||||||||||||||||||
Sbjct: 702497 caccgccacgccggtcggcg 702516
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>dbj|AP001979.7| Homo sapiens genomic DNA, chromosome 11 clone:RP11-259P6, complete
             sequence
          Length = 147533

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 142   cacaacagaaccgaacacaacaaaacac 169
             |||||||||||  |||||||||||||||
Sbjct: 14439 cacaacagaactcaacacaacaaaacac 14412
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>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence
          Length = 1844853

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      aaggaaatttatcttatcga 26
              ||||||||||||||||||||
Sbjct: 823985 aaggaaatttatcttatcga 823966
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>gb|AE000657.1| Aquifex aeolicus VF5, complete genome
          Length = 1551335

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 104    tcctccagcctctcttctgttctt 127
              |||||||| |||||||||||||||
Sbjct: 301470 tcctccagactctcttctgttctt 301447
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>emb|CT009632.14| Mouse DNA sequence from clone RP23-5G10 on chromosome 16, complete
             sequence
          Length = 208600

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   cctcccacccccatccatcc 320
             ||||||||||||||||||||
Sbjct: 50196 cctcccacccccatccatcc 50177
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>emb|CT033749.8| Mouse DNA sequence from clone RP23-14N10 on chromosome 17, complete
             sequence
          Length = 212052

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   ctctcttctgttctttcttc 132
             ||||||||||||||||||||
Sbjct: 76293 ctctcttctgttctttcttc 76312
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 25      gacatcctgtaacttgacag 44
               ||||||||||||||||||||
Sbjct: 2112954 gacatcctgtaacttgacag 2112935


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,867,682
Number of Sequences: 3902068
Number of extensions: 3867682
Number of successful extensions: 83828
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83585
Number of HSP's gapped (non-prelim): 243
length of query: 389
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 367
effective length of database: 17,147,199,772
effective search space: 6293022316324
effective search space used: 6293022316324
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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