ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast57a12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome 48 0.015
2gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome... 48 0.015
3gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N... 48 0.015
4gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA... 48 0.015
5gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1... 48 0.015
6gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.015
7gb|AF493288.2| Uncultured bacterium clone pHS20 16S ribosomal RN... 48 0.015
8emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome 48 0.015
9emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor... 48 0.015
10gb|DQ129641.1| Uncultured bacterium clone AKIW1139 16S ribosomal... 48 0.015
11emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,... 48 0.015
12emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4,... 48 0.015
13emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4,... 48 0.015
14emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloropl... 48 0.015
15dbj|AB254251.1| Uncultured bacterium gene for 16S rRNA, partial ... 48 0.015
16gb|DQ417650.1| Festuca ovina 16S ribosomal RNA gene, partial seq... 48 0.015
17gb|DQ417649.1| Agrostis capillaris 16S ribosomal RNA gene, parti... 48 0.015
18gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.015
19gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,... 48 0.015
20dbj|AB240470.1| Uncultured bacterium gene for 16S rRNA, partial ... 48 0.015
21gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N... 48 0.015
22gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, c... 48 0.015
23dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.015
24dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.015
25dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.015
26dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.015
27dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.015
28dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.015
29dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.015
30gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 gen... 48 0.015
31gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome 48 0.015
32dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.015
33gb|DQ344624.1| Triticum aestivum vacuolar ATP synthase subunit E... 48 0.015
34gb|AF176637.1|AF176637 Plastid transformation vector pMSK49 plas... 48 0.015
35dbj|AP005760.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.015
36dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.015
37dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.015
38emb|AJ308294.1|UMA308294 Uncultured bacterium partial 16S rRNA g... 48 0.015
39dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.015
40emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon 48 0.015
41dbj|AK105027.2| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.015
42dbj|AK108725.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.015
43dbj|AK105341.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.015
44dbj|AK060799.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.015
45dbj|AK059639.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.015
46dbj|AK059310.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.015
47dbj|AK058774.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.015
48emb|AJ239003.1|TAE239003 Triticum aestivum (L.) partial chloropl... 48 0.015
49gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.015
50emb|AJ555400.1|TTU555400 Triticum turgidum subsp. dicoccum parti... 48 0.015
51emb|AJ555402.1|ATA555402 Aegilops tauschii partial chloroplast 1... 48 0.015
52emb|AJ555401.1|ASP555401 Aegilops speltoides partial chloroplast... 48 0.015
53emb|AM159498.1| Uncultured bacterium 16S rRNA gene, clone RB90b-72 48 0.015
54emb|AM159495.1| Uncultured bacterium 16S rRNA gene, clone RB90b-49 48 0.015
55emb|AM159480.1| Uncultured bacterium 16S rRNA gene, clone RB90b-43 48 0.015
56emb|AM159434.1| Uncultured bacterium 16S rRNA gene, clone RB45-28 48 0.015
57emb|AM159431.1| Uncultured bacterium 16S rRNA gene, clone RB45-25e 48 0.015
58emb|AM159430.1| Uncultured bacterium 16S rRNA gene, clone RB45-24e 48 0.015
59emb|AM159428.1| Uncultured bacterium 16S rRNA gene, clone RB45-22e 48 0.015
60emb|AM159403.1| Uncultured bacterium 16S rRNA gene, clone RB45-20 48 0.015
61dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ... 48 0.015
62dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome 48 0.015
63dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome 48 0.015
64emb|AJ431195.1|ZMA431195 Zea mays partial 16S rRNA gene, clone 1_42 48 0.015
65emb|AM039608.1| Pinus taeda partial 16S rRNA gene, clone 3A 48 0.015
66gb|AE014827.1| Plasmodium falciparum 3D7 chromosome 14 section 1... 46 0.060
67dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.060
68dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.060
69gb|AC141644.6| Mus musculus BAC clone RP23-115F21 from chromosom... 46 0.060
70ref|XM_469143.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.24
71gb|AC131079.11| Mus musculus chromosome 14, clone RP23-434L17, c... 44 0.24
72gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.24
73gb|AC137991.3| Oryza sativa chromosome 3 BAC OSJNBa0034D21 genom... 44 0.24
74dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.24
75dbj|AK110704.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.24
76gb|U35602.1|UEU35602 Unidentified embryophyte clone 94R6 from Wi... 42 0.93
77gb|AY952420.1| Asarum caudigerum tRNA-Lys (trnK) gene, partial s... 42 0.93
78gb|AE014846.1| Plasmodium falciparum 3D7 chromosome 12, section ... 42 0.93
79ref|XM_452594.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C08866g ... 40 3.7
80gb|AY387369.1| Uncultured eukaryote clone OT124 16S ribosomal RN... 40 3.7
81gb|AY795633.2| Uncultured Oscillatoriales cyanobacterium clone V... 40 3.7
82emb|AM086239.1| Pinus thunbergii plastid 16S rRNA gene, isolate ... 40 3.7
83emb|AJ889116.1| Uncultured cyanobacterium partial 16S rRNA gene,... 40 3.7
84emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 3.7
85emb|BX530077.4| Zebrafish DNA sequence from clone CH211-22D5 in ... 40 3.7
86dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.7
87gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome 40 3.7
88gb|DQ004284.1| Uncultured cyanobacterium clone AEN23 16S ribosom... 40 3.7
89gb|AC008171.3| Homo sapiens BAC clone RP11-326D7 from 2, complet... 40 3.7
90gb|AF393602.1| Mesotaenium caldariorum small subunit ribosomal R... 40 3.7
91gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.7
92emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510... 40 3.7
93gb|U47845.1|CRU47845 Cytinus ruber 16S ribosomal RNA gene, chlor... 40 3.7
94emb|AJ867654.1| Uncultured phototrophic eukaryote partial 16S rR... 40 3.7
95emb|AJ867653.1| Uncultured phototrophic eukaryote partial 16S rR... 40 3.7
96emb|AJ867652.1| Uncultured phototrophic eukaryote partial 16S rR... 40 3.7
97emb|AJ867651.1| Uncultured phototrophic eukaryote partial 16S rR... 40 3.7
98emb|AJ867649.1| Uncultured phototrophic eukaryote partial 16S rR... 40 3.7
99emb|AJ867648.1| Uncultured phototrophic eukaryote partial 16S rR... 40 3.7
100emb|AM039622.1| Pinus taeda partial 16S rRNA gene, clone 87A 40 3.7
101emb|AM039621.1| Pinus taeda partial 16S rRNA gene, clone 73A 40 3.7
102emb|AM039620.1| Pinus taeda partial 16S rRNA gene, clone 67A 40 3.7
103emb|AM039619.1| Pinus taeda partial 16S rRNA gene, clone 63A 40 3.7
104emb|AM039618.1| Pinus taeda partial 16S rRNA gene, clone 61S 40 3.7
105emb|AM039617.1| Pinus taeda partial 16S rRNA gene, clone 55A 40 3.7
106emb|AM039616.1| Pinus taeda partial 16S rRNA gene, clone 54A 40 3.7
107emb|AM039615.1| Pinus taeda partial 16S rRNA gene, clone 45A 40 3.7
108emb|AM039614.1| Pinus taeda partial 16S rRNA gene, clone 47A 40 3.7
109emb|AM039613.1| Pinus taeda partial 16S rRNA gene, clone 44A 40 3.7
110emb|AM039612.1| Pinus taeda partial 16S rRNA gene, clone 41A 40 3.7
111emb|AM039611.1| Pinus taeda partial 16S rRNA gene, clone 31A 40 3.7
112emb|AM039610.1| Pinus taeda partial 16S rRNA gene, clone 29A 40 3.7
113dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complet... 40 3.7 
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome
          Length = 569630

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 76     tttccgatctcaatgcatttcatcgctc 103
              |||||||||||||||||||||| |||||
Sbjct: 328860 tttccgatctcaatgcatttcaccgctc 328887
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>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07,
             complete sequence
          Length = 164477

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 88903 tttccgatctcaatgcatttcaccgctc 88930
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>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
              complete genome
          Length = 134551

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 76     tttccgatctcaatgcatttcatcgctc 103
              |||||||||||||||||||||| |||||
Sbjct: 123189 tttccgatctcaatgcatttcaccgctc 123216



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 91967 tttccgatctcaatgcatttcaccgctc 91940
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>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
              complete genome
          Length = 134551

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 76     tttccgatctcaatgcatttcatcgctc 103
              |||||||||||||||||||||| |||||
Sbjct: 123189 tttccgatctcaatgcatttcaccgctc 123216



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 91967 tttccgatctcaatgcatttcaccgctc 91940
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>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete
              genome
          Length = 134496

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 76     tttccgatctcaatgcatttcatcgctc 103
              |||||||||||||||||||||| |||||
Sbjct: 123138 tttccgatctcaatgcatttcaccgctc 123165



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 91912 tttccgatctcaatgcatttcaccgctc 91885
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>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
              OSJNBa0034M22, complete sequence
          Length = 149435

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 76     tttccgatctcaatgcatttcatcgctc 103
              |||||||||||||||||||||| |||||
Sbjct: 126725 tttccgatctcaatgcatttcaccgctc 126752
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>gb|AF493288.2| Uncultured bacterium clone pHS20 16S ribosomal RNA gene, partial
           sequence
          Length = 422

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 221 tttccgatctcaatgcatttcaccgctc 248
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>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 76     tttccgatctcaatgcatttcatcgctc 103
              |||||||||||||||||||||| |||||
Sbjct: 126916 tttccgatctcaatgcatttcaccgctc 126943



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 95821 tttccgatctcaatgcatttcaccgctc 95794
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>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 76     tttccgatctcaatgcatttcatcgctc 103
              |||||||||||||||||||||| |||||
Sbjct: 123159 tttccgatctcaatgcatttcaccgctc 123186



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 91959 tttccgatctcaatgcatttcaccgctc 91932
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>gb|DQ129641.1| Uncultured bacterium clone AKIW1139 16S ribosomal RNA gene, partial
           sequence
          Length = 1444

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 649 tttccgatctcaatgcatttcaccgctc 622
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>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
              complete sequence
          Length = 145980

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 76     tttccgatctcaatgcatttcatcgctc 103
              |||||||||||||||||||||| |||||
Sbjct: 119012 tttccgatctcaatgcatttcaccgctc 118985



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 87137 tttccgatctcaatgcatttcaccgctc 87110



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 10734 tttccgatctcaatgcatttcaccgctc 10707
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>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21,
              complete sequence
          Length = 167113

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 76     tttccgatctcaatgcatttcatcgctc 103
              |||||||||||||||||||||| |||||
Sbjct: 137542 tttccgatctcaatgcatttcaccgctc 137515
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>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
             complete sequence
          Length = 130273

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 62277 tttccgatctcaatgcatttcaccgctc 62304
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>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence
          Length = 163935

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 76     tttccgatctcaatgcatttcatcgctc 103
              ||||||||||||| ||||||||||||||
Sbjct: 146666 tttccgatctcaacgcatttcatcgctc 146693



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 76     tttccgatctcaatgcatttcatcgctc 103
              ||||||||||||| ||||||||||||||
Sbjct: 106662 tttccgatctcaacgcatttcatcgctc 106635
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>dbj|AB254251.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone: 3m
          Length = 617

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 550 tttccgatctcaatgcatttcaccgctc 523
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>gb|DQ417650.1| Festuca ovina 16S ribosomal RNA gene, partial sequence; plastid
          Length = 1409

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 625 tttccgatctcaatgcatttcaccgctc 598
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>gb|DQ417649.1| Agrostis capillaris 16S ribosomal RNA gene, partial sequence;
           plastid
          Length = 1406

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 625 tttccgatctcaatgcatttcaccgctc 598
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>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 90150 tttccgatctcaatgcatttcaccgctc 90123
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>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 48146 tttccgatctcaatgcatttcaccgctc 48173



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 16972 tttccgatctcaatgcatttcaccgctc 16945
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>dbj|AB240470.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:
           SRRT24
          Length = 1478

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 678 tttccgatctcaatgcatttcaccgctc 651
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>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
             chromosome 10, complete sequence
          Length = 134933

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 61869 tttccgatctcaatgcatttcaccgctc 61896
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>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 24214 tttccgatctcaatgcatttcaccgctc 24187
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 76       tttccgatctcaatgcatttcatcgctc 103
                |||||||||||||||||||||| |||||
Sbjct: 23619596 tttccgatctcaatgcatttcaccgctc 23619623



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 76      tttccgatctcaatgcatttcatcgctc 103
               |||||||||||||||||||||| |||||
Sbjct: 9264892 tttccgatctcaatgcatttcaccgctc 9264865



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 76      tttccgatctcaatgcatttcatcgctc 103
               |||||||||||||||||||||| |||||
Sbjct: 9224392 tttccgatctcaatgcatttcaccgctc 9224365



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 76      tttccgatctcaatgcatttcatcgctc 103
               |||||||||||||||||||||| |||||
Sbjct: 9206064 tttccgatctcaatgcatttcaccgctc 9206037



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 76      tttccgatctcaatgcatttcatcgctc 103
               |||||||||||||||||||||| |||||
Sbjct: 9160986 tttccgatctcaatgcatttcaccgctc 9160959



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 76      tttccgatctcaatgcatttcatcgctc 103
               |||||||||||||||||||||| |||||
Sbjct: 9129111 tttccgatctcaatgcatttcaccgctc 9129084



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 76      tttccgatctcaatgcatttcatcgctc 103
               |||||||||||||||||||||| |||||
Sbjct: 9052808 tttccgatctcaatgcatttcaccgctc 9052781
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 76       tttccgatctcaatgcatttcatcgctc 103
                |||||||||||||||||||||| |||||
Sbjct: 19934879 tttccgatctcaatgcatttcaccgctc 19934852



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 76       tttccgatctcaatgcatttcatcgctc 103
                |||||||||||||||||||||| |||||
Sbjct: 10383758 tttccgatctcaatgcatttcaccgctc 10383731



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 76       tttccgatctcaatgcatttcatcgctc 103
                |||||||||||||||||||||| |||||
Sbjct: 10280544 tttccgatctcaatgcatttcaccgctc 10280571
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 76      tttccgatctcaatgcatttcatcgctc 103
               |||||||||||||||||||||| |||||
Sbjct: 9245103 tttccgatctcaatgcatttcaccgctc 9245130
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 76       tttccgatctcaatgcatttcatcgctc 103
                |||||||||||||||||||||| |||||
Sbjct: 14179805 tttccgatctcaatgcatttcaccgctc 14179832
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 76       tttccgatctcaatgcatttcatcgctc 103
                |||||||||||||||||||||| |||||
Sbjct: 26646176 tttccgatctcaatgcatttcaccgctc 26646149
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 76       tttccgatctcaatgcatttcatcgctc 103
                |||||||||||||||||||||| |||||
Sbjct: 12829266 tttccgatctcaatgcatttcaccgctc 12829293



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 76     tttccgatctcaatgcatttcatcgctc 103
              |||||||||||||||||||||| |||||
Sbjct: 884479 tttccgatctcaatgcatttcaccgctc 884506
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 76       tttccgatctcaatgcatttcatcgctc 103
                |||||||||||||||||||||| |||||
Sbjct: 14346152 tttccgatctcaatgcatttcaccgctc 14346125



 Score = 46.1 bits (23), Expect = 0.060
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 76     tttccgatctcaatgcatttcatcgct 102
              |||||||||||||||||||||| ||||
Sbjct: 811567 tttccgatctcaatgcatttcaccgct 811593
to top
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete
             sequence
          Length = 116932

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 51164 tttccgatctcaatgcatttcaccgctc 51191
to top
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 76     tttccgatctcaatgcatttcatcgctc 103
              |||||||||||||||||||||| |||||
Sbjct: 126985 tttccgatctcaatgcatttcaccgctc 127012



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 95852 tttccgatctcaatgcatttcaccgctc 95825
to top
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 56316 tttccgatctcaatgcatttcaccgctc 56343
to top
>gb|DQ344624.1| Triticum aestivum vacuolar ATP synthase subunit E (VATE) mRNA,
            complete cds
          Length = 1970

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 76   tttccgatctcaatgcatttcatcgctc 103
            |||||||||||||||||||||| |||||
Sbjct: 1608 tttccgatctcaatgcatttcaccgctc 1581
to top
>gb|AF176637.1|AF176637 Plastid transformation vector pMSK49 plastid targeting region
          Length = 5270

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 672 tttccgatctcaatgcatttcaccgctc 699
to top
>dbj|AP005760.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:B1047G05
          Length = 145431

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 76   tttccgatctcaatgcatttcatcgctc 103
            |||||||||||||||||||||| |||||
Sbjct: 3639 tttccgatctcaatgcatttcaccgctc 3612
to top
>dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0677B10
          Length = 134423

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 62606 tttccgatctcaatgcatttcaccgctc 62579
to top
>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0067K15
          Length = 160162

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 64686 tttccgatctcaatgcatttcaccgctc 64713
to top
>emb|AJ308294.1|UMA308294 Uncultured bacterium partial 16S rRNA gene, clone
           F99_10b_maize_chloroplast
          Length = 371

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 177 tttccgatctcaatgcatttcaccgctc 150
to top
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0022A24
          Length = 148347

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 68074 tttccgatctcaatgcatttcaccgctc 68047
to top
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon
          Length = 8862

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 76   tttccgatctcaatgcatttcatcgctc 103
            |||||||||||||||||||||| |||||
Sbjct: 2174 tttccgatctcaatgcatttcaccgctc 2147
to top
>dbj|AK105027.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-A03, full
           insert sequence
          Length = 1247

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 225 tttccgatctcaatgcatttcaccgctc 198
to top
>dbj|AK108725.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-C09, full
           insert sequence
          Length = 1602

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 322 tttccgatctcaatgcatttcaccgctc 295
to top
>dbj|AK105341.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-G10, full
           insert sequence
          Length = 1448

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 236 tttccgatctcaatgcatttcaccgctc 209
to top
>dbj|AK060799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F03, full
           insert sequence
          Length = 1769

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 73  tttccgatctcaatgcatttcaccgctc 46
to top
>dbj|AK059639.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B03, full
           insert sequence
          Length = 1569

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 606 tttccgatctcaatgcatttcaccgctc 579
to top
>dbj|AK059310.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-G07, full
           insert sequence
          Length = 1098

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 336 tttccgatctcaatgcatttcaccgctc 309
to top
>dbj|AK058774.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-A07, full
           insert sequence
          Length = 591

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 65  tttccgatctcaatgcatttcaccgctc 38
to top
>emb|AJ239003.1|TAE239003 Triticum aestivum (L.) partial chloroplast 16S rRNA gene
          Length = 1482

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 652 tttccgatctcaatgcatttcaccgctc 625
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 76       tttccgatctcaatgcatttcatcgctc 103
                |||||||||||||||||||||| |||||
Sbjct: 19946155 tttccgatctcaatgcatttcaccgctc 19946128



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 76       tttccgatctcaatgcatttcatcgctc 103
                |||||||||||||||||||||| |||||
Sbjct: 10389797 tttccgatctcaatgcatttcaccgctc 10389770



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 76       tttccgatctcaatgcatttcatcgctc 103
                |||||||||||||||||||||| |||||
Sbjct: 10286583 tttccgatctcaatgcatttcaccgctc 10286610
to top
>emb|AJ555400.1|TTU555400 Triticum turgidum subsp. dicoccum partial chloroplast 16S rRNA gene
          Length = 1483

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 653 tttccgatctcaatgcatttcaccgctc 626
to top
>emb|AJ555402.1|ATA555402 Aegilops tauschii partial chloroplast 16S rRNA gene
          Length = 1483

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 653 tttccgatctcaatgcatttcaccgctc 626
to top
>emb|AJ555401.1|ASP555401 Aegilops speltoides partial chloroplast 16S rRNA gene
          Length = 1483

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 653 tttccgatctcaatgcatttcaccgctc 626
to top
>emb|AM159498.1| Uncultured bacterium 16S rRNA gene, clone RB90b-72
          Length = 997

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 647 tttccgatctcaatgcatttcaccgctc 620
to top
>emb|AM159495.1| Uncultured bacterium 16S rRNA gene, clone RB90b-49
          Length = 1008

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 658 tttccgatctcaatgcatttcaccgctc 631
to top
>emb|AM159480.1| Uncultured bacterium 16S rRNA gene, clone RB90b-43
          Length = 1095

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 753 tttccgatctcaatgcatttcaccgctc 726
to top
>emb|AM159434.1| Uncultured bacterium 16S rRNA gene, clone RB45-28
          Length = 995

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 647 tttccgatctcaatgcatttcaccgctc 620
to top
>emb|AM159431.1| Uncultured bacterium 16S rRNA gene, clone RB45-25e
          Length = 984

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 650 tttccgatctcaatgcatttcaccgctc 623
to top
>emb|AM159430.1| Uncultured bacterium 16S rRNA gene, clone RB45-24e
          Length = 991

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 649 tttccgatctcaatgcatttcaccgctc 622
to top
>emb|AM159428.1| Uncultured bacterium 16S rRNA gene, clone RB45-22e
          Length = 997

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 651 tttccgatctcaatgcatttcaccgctc 624
to top
>emb|AM159403.1| Uncultured bacterium 16S rRNA gene, clone RB45-20
          Length = 993

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 647 tttccgatctcaatgcatttcaccgctc 620
to top
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 76     tttccgatctcaatgcatttcatcgctc 103
              |||||||||||||||||||||| |||||
Sbjct: 127702 tttccgatctcaatgcatttcaccgctc 127729



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 96529 tttccgatctcaatgcatttcaccgctc 96502
to top
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 76     tttccgatctcaatgcatttcatcgctc 103
              |||||||||||||||||||||| |||||
Sbjct: 123132 tttccgatctcaatgcatttcaccgctc 123159



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 91907 tttccgatctcaatgcatttcaccgctc 91880
to top
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 76     tttccgatctcaatgcatttcatcgctc 103
              |||||||||||||||||||||| |||||
Sbjct: 123182 tttccgatctcaatgcatttcaccgctc 123209



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||||||||||||||||||||| |||||
Sbjct: 91712 tttccgatctcaatgcatttcaccgctc 91685
to top
>emb|AJ431195.1|ZMA431195 Zea mays partial 16S rRNA gene, clone 1_42
          Length = 371

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 177 tttccgatctcaatgcatttcaccgctc 150
to top
>emb|AM039608.1| Pinus taeda partial 16S rRNA gene, clone 3A
          Length = 566

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           |||||||||||||||||||||| |||||
Sbjct: 352 tttccgatctcaatgcatttcaccgctc 325
to top
>gb|AE014827.1| Plasmodium falciparum 3D7 chromosome 14 section 12 of 13 of the complete
              sequence
          Length = 254436

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 187    gaatatataataagataacaaaa 209
              |||||||||||||||||||||||
Sbjct: 228108 gaatatataataagataacaaaa 228130
to top
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1442_E05
          Length = 162407

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 76    tttccgatctcaatgcatttcatcgct 102
             |||||||||||||||||||||| ||||
Sbjct: 20775 tttccgatctcaatgcatttcaccgct 20801
to top
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0036E06
          Length = 137926

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 76    tttccgatctcaatgcatttcatcgct 102
             |||||||||||||||||||||| ||||
Sbjct: 89698 tttccgatctcaatgcatttcaccgct 89724
to top
>gb|AC141644.6| Mus musculus BAC clone RP23-115F21 from chromosome 6, complete sequence
          Length = 187643

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 186   tgaatatataataagataacaaa 208
             |||||||||||||||||||||||
Sbjct: 72174 tgaatatataataagataacaaa 72196
to top
>ref|XM_469143.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 456

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 76 tttccgatctcaatgcatttca 97
          ||||||||||||||||||||||
Sbjct: 62 tttccgatctcaatgcatttca 41
to top
>gb|AC131079.11| Mus musculus chromosome 14, clone RP23-434L17, complete sequence
          Length = 203276

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 192    tataataagataacaaaagaat 213
              ||||||||||||||||||||||
Sbjct: 119342 tataataagataacaaaagaat 119321
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 76       tttccgatctcaatgcatttca 97
                ||||||||||||||||||||||
Sbjct: 25722670 tttccgatctcaatgcatttca 25722649
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>gb|AC137991.3| Oryza sativa chromosome 3 BAC OSJNBa0034D21 genomic sequence, complete
              sequence
          Length = 190834

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 76     tttccgatctcaatgcatttca 97
              ||||||||||||||||||||||
Sbjct: 122226 tttccgatctcaatgcatttca 122247
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 76       tttccgatctcaatgcatttca 97
                ||||||||||||||||||||||
Sbjct: 25813979 tttccgatctcaatgcatttca 25813958
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>dbj|AK110704.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-C05,
          full insert sequence
          Length = 694

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 76 tttccgatctcaatgcatttca 97
          ||||||||||||||||||||||
Sbjct: 22 tttccgatctcaatgcatttca 1
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>gb|U35602.1|UEU35602 Unidentified embryophyte clone 94R6 from Wisconsin agricultural
           soil, chloroplast gene encoding chlorplast protein, 16S
           ribosomal RNA gene, partial sequence
          Length = 305

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 76  tttccgatctcaatgcatttc 96
           |||||||||||||||||||||
Sbjct: 189 tttccgatctcaatgcatttc 169
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>gb|AY952420.1| Asarum caudigerum tRNA-Lys (trnK) gene, partial sequence; and
           maturase K (matK) gene, complete cds; chloroplast
          Length = 2613

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 189 atatataataagataacaaaagaat 213
           |||||||||||||||| ||||||||
Sbjct: 694 atatataataagataagaaaagaat 670
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>gb|AE014846.1| Plasmodium falciparum 3D7 chromosome 12, section 3 of 9 of the complete
             sequence
          Length = 253132

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 188   aatatataataagataacaaaagaa 212
             ||||||||||||||||| |||||||
Sbjct: 70926 aatatataataagataataaaagaa 70902
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>ref|XM_452594.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C08866g predicted mRNA
          Length = 1935

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 gacagacgtgatatgaatat 192
           ||||||||||||||||||||
Sbjct: 61  gacagacgtgatatgaatat 80
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>gb|AY387369.1| Uncultured eukaryote clone OT124 16S ribosomal RNA gene, partial
           sequence
          Length = 1056

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 654 tttccgatctcaacgcatttcaccgctc 627
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>gb|AY795633.2| Uncultured Oscillatoriales cyanobacterium clone Veg.-frei_9_29.07
           16S ribosomal RNA gene, partial sequence
          Length = 646

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 632 tttccgatctcaacgcatttcaccgctc 605
to top
>emb|AM086239.1| Pinus thunbergii plastid 16S rRNA gene, isolate 20 0D6
          Length = 924

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 575 tttccgatctcaacgcatttcaccgctc 548
to top
>emb|AJ889116.1| Uncultured cyanobacterium partial 16S rRNA gene, isolate DGGE band
           C
          Length = 370

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 297 tttccgatctcaacgcatttcaccgctc 270
to top
>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1753957

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    gacagacgtgatatgaatat 192
              ||||||||||||||||||||
Sbjct: 773593 gacagacgtgatatgaatat 773574
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>emb|BX530077.4| Zebrafish DNA sequence from clone CH211-22D5 in linkage group 21,
             complete sequence
          Length = 200625

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 173   gacagacgtgatatgaatatataa 196
             ||||||||||||||||| ||||||
Sbjct: 20025 gacagacgtgatatgaaaatataa 20002
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 76       tttccgatctcaatgcatttcatcgctc 103
                |||| ||||||||||||||||| |||||
Sbjct: 19234574 tttctgatctcaatgcatttcaccgctc 19234547
to top
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome
          Length = 116866

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             ||||||||||||| |||||||| |||||
Sbjct: 82911 tttccgatctcaacgcatttcaccgctc 82884
to top
>gb|DQ004284.1| Uncultured cyanobacterium clone AEN23 16S ribosomal RNA gene,
           partial sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 72  gttttttccgatctcaatgcatttcatcgctc 103
           ||||||||||||||| | |||||||| |||||
Sbjct: 321 gttttttccgatctctacgcatttcaccgctc 290
to top
>gb|AC008171.3| Homo sapiens BAC clone RP11-326D7 from 2, complete sequence
          Length = 127646

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    atatatacttatcacataac 43
             ||||||||||||||||||||
Sbjct: 85076 atatatacttatcacataac 85057
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>gb|AF393602.1| Mesotaenium caldariorum small subunit ribosomal RNA (rrs) gene,
           partial sequence; chloroplast gene for chloroplast
           product
          Length = 1461

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 637 tttccgatctcaacgcatttcaccgctc 610
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 76       tttccgatctcaatgcatttcatcgctc 103
                |||| ||||||||||||||||| |||||
Sbjct: 19160801 tttctgatctcaatgcatttcaccgctc 19160774
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>emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510_A06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 136155

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             |||| ||||||||||||||||| |||||
Sbjct: 67904 tttctgatctcaatgcatttcaccgctc 67877
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>gb|U47845.1|CRU47845 Cytinus ruber 16S ribosomal RNA gene, chloroplast gene for
           chloroplast RNA, partial sequence
          Length = 1418

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||| |||||||| |||||||
Sbjct: 626 tttccgatctctatgcattttatcgctc 599
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>emb|AJ867654.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS
           8-Bact63
          Length = 1442

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 634 tttccgatctcaacgcatttcaccgctc 607
to top
>emb|AJ867653.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS
           8-Bact62
          Length = 1448

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 634 tttccgatctcaacgcatttcaccgctc 607
to top
>emb|AJ867652.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS
           8-Bact35
          Length = 1441

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 632 tttccgatctcaacgcatttcaccgctc 605
to top
>emb|AJ867651.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS
           8-Bact33
          Length = 1476

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 667 tttccgatctcaacgcatttcaccgctc 640
to top
>emb|AJ867649.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS
           8-Bact22
          Length = 1416

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 747 tttccgatctcaacgcatttcaccgctc 720
to top
>emb|AJ867648.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS
           8-Bact02
          Length = 1503

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 682 tttccgatctcaacgcatttcaccgctc 655
to top
>emb|AM039622.1| Pinus taeda partial 16S rRNA gene, clone 87A
          Length = 566

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 352 tttccgatctcaacgcatttcaccgctc 325
to top
>emb|AM039621.1| Pinus taeda partial 16S rRNA gene, clone 73A
          Length = 566

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 352 tttccgatctcaacgcatttcaccgctc 325
to top
>emb|AM039620.1| Pinus taeda partial 16S rRNA gene, clone 67A
          Length = 566

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 352 tttccgatctcaacgcatttcaccgctc 325
to top
>emb|AM039619.1| Pinus taeda partial 16S rRNA gene, clone 63A
          Length = 556

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 352 tttccgatctcaacgcatttcaccgctc 325
to top
>emb|AM039618.1| Pinus taeda partial 16S rRNA gene, clone 61S
          Length = 566

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 352 tttccgatctcaacgcatttcaccgctc 325
to top
>emb|AM039617.1| Pinus taeda partial 16S rRNA gene, clone 55A
          Length = 566

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 352 tttccgatctcaacgcatttcaccgctc 325
to top
>emb|AM039616.1| Pinus taeda partial 16S rRNA gene, clone 54A
          Length = 566

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 352 tttccgatctcaacgcatttcaccgctc 325
to top
>emb|AM039615.1| Pinus taeda partial 16S rRNA gene, clone 45A
          Length = 566

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 352 tttccgatctcaacgcatttcaccgctc 325
to top
>emb|AM039614.1| Pinus taeda partial 16S rRNA gene, clone 47A
          Length = 566

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 352 tttccgatctcaacgcatttcaccgctc 325
to top
>emb|AM039613.1| Pinus taeda partial 16S rRNA gene, clone 44A
          Length = 566

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 352 tttccgatctcaacgcatttcaccgctc 325
to top
>emb|AM039612.1| Pinus taeda partial 16S rRNA gene, clone 41A
          Length = 566

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 352 tttccgatctcaacgcatttcaccgctc 325
to top
>emb|AM039611.1| Pinus taeda partial 16S rRNA gene, clone 31A
          Length = 566

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 352 tttccgatctcaacgcatttcaccgctc 325
to top
>emb|AM039610.1| Pinus taeda partial 16S rRNA gene, clone 29A
          Length = 566

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 76  tttccgatctcaatgcatttcatcgctc 103
           ||||||||||||| |||||||| |||||
Sbjct: 352 tttccgatctcaacgcatttcaccgctc 325
to top
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence
          Length = 119707

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 76    tttccgatctcaatgcatttcatcgctc 103
             ||||||||||||| |||||||| |||||
Sbjct: 85000 tttccgatctcaacgcatttcaccgctc 84973


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,993,466
Number of Sequences: 3902068
Number of extensions: 1993466
Number of successful extensions: 39881
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 39507
Number of HSP's gapped (non-prelim): 375
length of query: 283
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 261
effective length of database: 17,147,199,772
effective search space: 4475419140492
effective search space used: 4475419140492
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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