>LKH1_SCHPO (Q10156) Dual specificity protein kinase lkh1 (EC 2.7.12.1)|
          Length = 575

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -1

Query: 165 ILDAGWRSQCDELHVYSCGCRLLNAVGSRGLHP*HLNLLHFCLLSTVGG 19
           IL  GW   CD   V+S GC L+     + L   H +  H C++  + G
Sbjct: 436 ILGLGWSYPCD---VWSIGCILVELFTGQALFQTHEDSEHLCMMEKILG 481

>RET_HUMAN (P07949) Proto-oncogene tyrosine-protein kinase receptor ret|
           precursor (EC 2.7.10.1) (C-ret)
          Length = 1114

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 95  FNNLQPHEYTCSSSHCDLHPASKIRLQPKEC 187
           F+   P   TC   HCD+     I + P++C
Sbjct: 555 FSTCSPSTKTCPDGHCDVVETQDINICPQDC 585

>Y1178_SYNY3 (P74178) Hypothetical protein sll1178|
          Length = 615

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +3

Query: 147 SIQRLKFGYNQRSAPFPPSSY*VLLGDSIYL--PSPLRLVVQLIR 275
           S+  LK  Y +   PF PS     +GD   L  PSP  L+V  +R
Sbjct: 446 SVMNLKIKYRESFRPFAPSVLAEKVGDYFELDQPSPYMLIVADVR 490

>PHO85_ASHGO (Q751E8) Negative regulator of the PHO system (EC 2.7.11.22)|
           (Serine/threonine-protein kinase PHO85)
          Length = 303

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 153 GWRSQCDELHVYSCGCRLLNAVGSRGLHP 67
           G R+ C  + ++SCGC L   +  + L P
Sbjct: 184 GSRTYCTSIDIWSCGCILAEMIMGKALFP 212

>DP2L_PYRAB (Q9V2F4) DNA polymerase II large subunit (EC 2.7.7.7) (Pol II)|
           [Contains: Pab polC intein (Pab pol II intein)]
          Length = 1455

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +2

Query: 62  CYGCNPRLPTAFNNLQPHEYTCSSSHCDLHPASKIRLQPKE 184
           C  CN   P +    + + YTC   +  L P +K +++P E
Sbjct: 731 CPRCNAEYPES--QAEGYNYTCPKCNVKLRPYAKRKIRPSE 769

>PHO85_KLULA (Q92241) Negative regulator of the PHO system (EC 2.7.11.22)|
           (Serine/threonine-protein kinase PHO85)
          Length = 304

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 153 GWRSQCDELHVYSCGCRLLNAVGSRGLHP 67
           G R+ C  + ++SCGC L   +  + L P
Sbjct: 182 GSRNYCTSIDIWSCGCILAEMIMGKPLFP 210

>RL9_ANASP (Q8YZA0) 50S ribosomal protein L9|
          Length = 152

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +3

Query: 36  VNRSGAS*GATDVIPGYQQRSTTCNHMNTHAVHRIVTSIQRLKFGYNQR 182
           V++ G S    DV PGY +       + THA   I+  ++R +    QR
Sbjct: 13  VSKLGRSGDLVDVAPGYARNYLIPQSLATHATPGILKQVERRREQERQR 61

>KR101_HUMAN (P60331) Keratin-associated protein 10-1 (Keratin-associated|
           protein 10.1) (High sulfur keratin-associated protein
           10.1) (Keratin-associated protein 18-1)
           (Keratin-associated protein 18.1)
          Length = 282

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 292 QTGIHQVWHFSSPCQLSCCWDSRC 363
           Q+  H     SSPCQ +CC   RC
Sbjct: 166 QSSCHPACCTSSPCQQACCVPVRC 189

>FBN1_MOUSE (Q61554) Fibrillin-1 precursor|
          Length = 2871

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -3

Query: 94  RCW*PGITSVAPQLAPLLFT 35
           RCW PG+T VAP++ P+  T
Sbjct: 364 RCWSPGVT-VAPEMCPIRST 382

>FBN1_HUMAN (P35555) Fibrillin-1 precursor|
          Length = 2871

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -3

Query: 94  RCW*PGITSVAPQLAPLLFT 35
           RCW PG+T VAP++ P+  T
Sbjct: 364 RCWSPGVT-VAPEMCPIRAT 382

>FBN1_BOVIN (P98133) Fibrillin-1 precursor (MP340)|
          Length = 2871

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -3

Query: 94  RCW*PGITSVAPQLAPLLFT 35
           RCW PG+T VAP++ P+  T
Sbjct: 364 RCWSPGVT-VAPEMCPIRAT 382


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,876,625
Number of Sequences: 219361
Number of extensions: 1137504
Number of successful extensions: 2352
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2352
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)