>gb|AY106470.1| Zea mays PCO136952 mRNA sequence
          Length = 741

 Score =  139 bits (70), Expect = 9e-30
 Identities = 82/86 (95%)
 Strand = Plus / Minus

                                                                       
Query: 360 aggtccacgtcgccaggatcgggctggccaccacgtggtggtcgctggaccagacgagcc 419
           ||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 471 aggtccacgtcgccgcgatcgggctggcgaccacgtggtggtcgctggaccagacgagcc 412

                                     
Query: 420 ggccgaacccgttggtgcccgacggc 445
           | ||||||||||||||||||||||||
Sbjct: 411 gcccgaacccgttggtgcccgacggc 386



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                   
Query: 390 ccacgtggtggtcgctggaccagacgagccggccgaaccc 429
           ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 60  ccacgtggtggtcgctggaccagacgagccgcccgaaccc 21

>ref|XM_469861.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2568

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                        
Query: 376  gatcgggctggccaccacgtggtggtcgctggaccagacgagccggccgaacccgttggt 435
            |||||||||||  || |||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 2277 gatcgggctggagacgacgtggtggtcgctggaccagacgaggcggccgaacccgttcgt 2218

                      
Query: 436  gcccgacggc 445
            ||| ||||||
Sbjct: 2217 gccggacggc 2208

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                            
Query: 356      ggtcaggtccacgtcgccaggatcgggctggccaccacgtggtggtcgctggaccagacg 415
                ||||||||||| ||| |   |||||||||||  || ||||||||||||||||||||||||
Sbjct: 31184374 ggtcaggtccatgtcacggcgatcgggctggagacgacgtggtggtcgctggaccagacg 31184433

                                              
Query: 416      agccggccgaacccgttggtgcccgacggc 445
                || |||||||||||||| ||||| ||||||
Sbjct: 31184434 aggcggccgaacccgttcgtgccggacggc 31184463



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 407      gaccagacgagccggccgaacccgttggtgcccgacggct 446
                ||||||||||| |||||||| |||  ||||||||||||||
Sbjct: 22513162 gaccagacgaggcggccgaatccggcggtgcccgacggct 22513123

>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete
              sequence
          Length = 128017

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                          
Query: 356    ggtcaggtccacgtcgccaggatcgggctggccaccacgtggtggtcgctggaccagacg 415
              ||||||||||| ||| |   |||||||||||  || ||||||||||||||||||||||||
Sbjct: 105015 ggtcaggtccatgtcacggcgatcgggctggagacgacgtggtggtcgctggaccagacg 105074

                                            
Query: 416    agccggccgaacccgttggtgcccgacggc 445
              || |||||||||||||| ||||| ||||||
Sbjct: 105075 aggcggccgaacccgttcgtgccggacggc 105104

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                            
Query: 356      ggtcaggtccacgtcgccaggatcgggctggccaccacgtggtggtcgctggaccagacg 415
                ||||||||||| ||| |   |||||||||||  || ||||||||||||||||||||||||
Sbjct: 31274897 ggtcaggtccatgtcacggcgatcgggctggagacgacgtggtggtcgctggaccagacg 31274956

                                              
Query: 416      agccggccgaacccgttggtgcccgacggc 445
                || |||||||||||||| ||||| ||||||
Sbjct: 31274957 aggcggccgaacccgttcgtgccggacggc 31274986



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 407      gaccagacgagccggccgaacccgttggtgcccgacggct 446
                ||||||||||| |||||||| |||  ||||||||||||||
Sbjct: 22506191 gaccagacgaggcggccgaatccggcggtgcccgacggct 22506152

>dbj|AK103255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123P12, full
            insert sequence
          Length = 2813

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                        
Query: 376  gatcgggctggccaccacgtggtggtcgctggaccagacgagccggccgaacccgttggt 435
            |||||||||||  || |||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 2525 gatcgggctggagacgacgtggtggtcgctggaccagacgaggcggccgaacccgttcgt 2466

                      
Query: 436  gcccgacggc 445
            ||| ||||||
Sbjct: 2465 gccggacggc 2456

>dbj|AK101646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055P14, full
            insert sequence
          Length = 2667

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                        
Query: 376  gatcgggctggccaccacgtggtggtcgctggaccagacgagccggccgaacccgttggt 435
            |||||||||||  || |||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 2330 gatcgggctggagacgacgtggtggtcgctggaccagacgaggcggccgaacccgttcgt 2271

                      
Query: 436  gcccgacggc 445
            ||| ||||||
Sbjct: 2270 gccggacggc 2261

>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete
              sequence
          Length = 157397

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                      
Query: 407    gaccagacgagccggccgaacccgttggtgcccgacggct 446
              ||||||||||| |||||||| |||  ||||||||||||||
Sbjct: 154984 gaccagacgaggcggccgaatccggcggtgcccgacggct 155023

>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete
              sequence
          Length = 145590

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                      
Query: 407    gaccagacgagccggccgaacccgttggtgcccgacggct 446
              ||||||||||| |||||||| |||  ||||||||||||||
Sbjct: 108409 gaccagacgaggcggccgaatccggcggtgcccgacggct 108370

>dbj|AK105749.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B09, full
            insert sequence
          Length = 2517

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 407  gaccagacgagccggccgaacccgttggtgcccgacggct 446
            ||||||||||| |||||||| |||  ||||||||||||||
Sbjct: 2295 gaccagacgaggcggccgaatccggcggtgcccgacggct 2256

>gb|AC090053.5| Leishmania major strain Friedlin chromosome Unknown clone P323,
             complete sequence
          Length = 66637

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 275   cggcggcgccattgctgccccgccgc 300
             |||||||||| |||||||||||||||
Sbjct: 52505 cggcggcgcctttgctgccccgccgc 52530

>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence
          Length = 285506

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 341    accgccgggcgtggtggtcag 361
              |||||||||||||||||||||
Sbjct: 104224 accgccgggcgtggtggtcag 104244

>gb|AC147028.3| Pan troglodytes BAC clone RP43-93F8 from 7, complete sequence
          Length = 170936

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     cggttccattgatctgtctgt 46
              |||||||||||||||||||||
Sbjct: 121900 cggttccattgatctgtctgt 121920

>gb|AC018646.3|AC018646 Homo sapiens chromosome 7 clone RP11-344L16, complete sequence
          Length = 184718

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    cggttccattgatctgtctgt 46
             |||||||||||||||||||||
Sbjct: 45452 cggttccattgatctgtctgt 45472

>gb|AC149694.2| Bos taurus  BAC CH240-423C21 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 186118

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     ggttccattgatctgtctgt 46
              ||||||||||||||||||||
Sbjct: 163865 ggttccattgatctgtctgt 163884

>ref|XM_993258.1| PREDICTED: Mus musculus cytochrome b reductase 1 (Cybrd1), mRNA
          Length = 5602

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 339  ctaccgccgggcgtggtggt 358
            ||||||||||||||||||||
Sbjct: 1873 ctaccgccgggcgtggtggt 1854

>ref|XM_910566.2| PREDICTED: Mus musculus cytochrome b reductase 1 (Cybrd1), mRNA
          Length = 5515

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 339  ctaccgccgggcgtggtggt 358
            ||||||||||||||||||||
Sbjct: 1786 ctaccgccgggcgtggtggt 1767

>ref|XM_130253.6| PREDICTED: Mus musculus cytochrome b reductase 1 (Cybrd1), mRNA
          Length = 5505

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 339  ctaccgccgggcgtggtggt 358
            ||||||||||||||||||||
Sbjct: 1780 ctaccgccgggcgtggtggt 1761

>emb|AL022312.7|HS1104E15 Human DNA sequence from clone RP5-1104E15 on chromosome 22q12.3-13.1
            Contains the MGAT3 gene for mannosyl
            (beta-1,4-)-glycoprotein
            beta-1,4-N-acetylglucosaminyltransferase, the gene for a
            predicted protein, the ATF4 gene for activating
            transcription factor 4 (tax-responsive enhancer element
            B67) and the 5' end of the CACNA1I gene for
            voltage-dependent calcium channel, alpha 1I subunit.
            Contains ESTs, STSs, GSSs and five putative CpG islands,
            complete sequence
          Length = 112460

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 224  taaatcaccacgccaaatcgacacacacgcac 255
            ||||| ||||||||||||| |||||| |||||
Sbjct: 9391 taaatgaccacgccaaatccacacacccgcac 9360

>emb|BX005453.13| Zebrafish DNA sequence from clone CH211-160E19 in linkage group 19,
              complete sequence
          Length = 185541

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    acaggctgcactggcaagca 191
              ||||||||||||||||||||
Sbjct: 145149 acaggctgcactggcaagca 145168

>gb|AC008483.7| Homo sapiens chromosome 5 clone CTC-406I6, complete sequence
          Length = 152533

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 28    gttccattgatctgtctgtgttta 51
             ||||||||||||||||||| ||||
Sbjct: 49274 gttccattgatctgtctgtcttta 49297

>dbj|AK029112.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
            library, clone:4732493J20 product:hypothetical protein,
            full insert sequence
          Length = 3833

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 339  ctaccgccgggcgtggtggt 358
            ||||||||||||||||||||
Sbjct: 1486 ctaccgccgggcgtggtggt 1467

>gb|AC010423.8| Homo sapiens chromosome 5 clone CTD-2193G5, complete sequence
          Length = 183787

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 28    gttccattgatctgtctgtgttta 51
             ||||||||||||||||||| ||||
Sbjct: 45420 gttccattgatctgtctgtcttta 45397

>emb|AL929228.5| Mouse DNA sequence from clone RP23-359E23 on chromosome 2, complete
              sequence
          Length = 212717

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    ctaccgccgggcgtggtggt 358
              ||||||||||||||||||||
Sbjct: 183823 ctaccgccgggcgtggtggt 183804

>emb|AJ336280.1|HSA336280 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ-EG7RS
          Length = 727

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 370 cgccaggatcgggctggccaccac 393
           ||||||||||||| ||||||||||
Sbjct: 309 cgccaggatcggggtggccaccac 332

>emb|AJ333865.1|HSA333865 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ-EO12RS
          Length = 714

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 370 cgccaggatcgggctggccaccac 393
           ||||||||||||| ||||||||||
Sbjct: 309 cgccaggatcggggtggccaccac 332

>gb|AC117584.11| Mus musculus chromosome 3, clone RP23-151D16, complete sequence
          Length = 242832

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    gttccattgatctgtctgtg 47
             ||||||||||||||||||||
Sbjct: 57654 gttccattgatctgtctgtg 57673

>gb|AC122433.5| Mus musculus BAC clone RP24-194G3 from chromosome 1, complete sequence
          Length = 170341

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 334   agcacctaccgccgggcgtggtgg 357
             |||||| |||||||||||||||||
Sbjct: 23759 agcaccaaccgccgggcgtggtgg 23782

>emb|AL671741.9| Mouse DNA sequence from clone RP23-336M6 on chromosome 3, complete
              sequence
          Length = 179909

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     gttccattgatctgtctgtg 47
              ||||||||||||||||||||
Sbjct: 148296 gttccattgatctgtctgtg 148277

>emb|AL627166.6| Mouse DNA sequence from clone RP23-59N8 on chromosome 4, complete
             sequence
          Length = 237007

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   ggcaaatcagtaaatcacca 233
             ||||||||||||||||||||
Sbjct: 82639 ggcaaatcagtaaatcacca 82620

>emb|AL663106.18| Mouse DNA sequence from clone CT7-314H19 on chromosome 3, complete
              sequence
          Length = 177223

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     gttccattgatctgtctgtg 47
              ||||||||||||||||||||
Sbjct: 118267 gttccattgatctgtctgtg 118286


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,457,161
Number of Sequences: 3902068
Number of extensions: 3457161
Number of successful extensions: 169892
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 169706
Number of HSP's gapped (non-prelim): 186
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)