| Clone Name | rbast57a03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 874 bits (441), Expect = 0.0 Identities = 441/441 (100%) Strand = Plus / Minus Query: 1 agaagaataataaagcacgcatgagcatacagacacgtagggatacaaattcctcgtact 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1121 agaagaataataaagcacgcatgagcatacagacacgtagggatacaaattcctcgtact 1062 Query: 61 agtacatctcatcgaccgcaccgcgaccggtggtacaacaacaactactgtagtagcggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1061 agtacatctcatcgaccgcaccgcgaccggtggtacaacaacaactactgtagtagcggt 1002 Query: 121 cctttacatcagtagtagtaagtaaagtatatcacgctcagacgtcgcggtcgcgtttgc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1001 cctttacatcagtagtagtaagtaaagtatatcacgctcagacgtcgcggtcgcgtttgc 942 Query: 181 actcgggcgacatggcggcgtatcgttcgcggtctgtgcagtagttgtagatggtgtgct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 941 actcgggcgacatggcggcgtatcgttcgcggtctgtgcagtagttgtagatggtgtgct 882 Query: 241 ccttcctgacccaggcgaggcggcggtactgcgcggcgtccaggtcctggaactcgggct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 881 ccttcctgacccaggcgaggcggcggtactgcgcggcgtccaggtcctggaactcgggct 822 Query: 301 gatcccaccagcgggcgccctgggtggcgcacaacttggcctccgccgacgcctcgcagc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 821 gatcccaccagcgggcgccctgggtggcgcacaacttggcctccgccgacgcctcgcagc 762 Query: 361 cgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccgtcttct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 cgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccgtcttct 702 Query: 421 cccgccctccccgagtcgccc 441 ||||||||||||||||||||| Sbjct: 701 cccgccctccccgagtcgccc 681
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 470 bits (237), Expect = e-129 Identities = 273/285 (95%) Strand = Plus / Minus Query: 157 ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 216 ||||||||||||||||||| |||||||| |||| |||||||||||| || ||| |||| | Sbjct: 926 ctcagacgtcgcggtcgcgcttgcactctggcgccatggcggcgtagcggtcgtggtcgg 867 Query: 217 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 866 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 807 Query: 277 cgtccaggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaact 336 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 806 cgtccaggtcctggaactcgggctggtcccaccagcgggcgccctgggtggcgcagaact 747 Query: 337 tggcctccgccgacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagg 396 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 tggcctccgcggacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagg 687 Query: 397 gcgccttggaccagtccgtcttctcccgccctccccgagtcgccc 441 ||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 686 gcgccttggaccagtccgtcttctcccgcccgccccgggtcgccc 642 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 37 gtagggatacaaattcctcgtactagtacatctcatcgaccgcaccgcgaccggtggtac 96 ||||||||||||||||||||||||| || ||||| |||||||||||||||| | || || Sbjct: 1039 gtagggatacaaattcctcgtactactaggtctcagcgaccgcaccgcgaccagcggcac 980 Query: 97 aacaacaacta 107 ||||||||||| Sbjct: 979 aacaacaacta 969
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 299 bits (151), Expect = 4e-78 Identities = 241/271 (88%) Strand = Plus / Minus Query: 157 ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 216 ||||| ||||||||||||| | |||||||||||||||||||| ||| ||||||||||| Sbjct: 115781 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 115722 Query: 217 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 276 |||||||||||||||||||||| ||| | |||||||||||||||||||||||| ||| Sbjct: 115721 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 115662 Query: 277 cgtccaggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaact 336 |||| ||||| ||||||| ||||| |||||||| |||||||||||||||||||| || Sbjct: 115661 cgtcgaggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtacc 115602 Query: 337 tggcctccgccgacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagg 396 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 115601 gggcctccgccgacgcctcgcagccatcgacgtggaagccccggtaggaggcgacgaacg 115542 Query: 397 gcgccttggaccagtccgtcttctcccgccc 427 ||||| |||||||| |||||||||||||| Sbjct: 115541 gcgcccgcgaccagtcggtcttctcccgccc 115511
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 299 bits (151), Expect = 4e-78 Identities = 241/271 (88%) Strand = Plus / Minus Query: 157 ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 216 ||||| ||||||||||||| | |||||||||||||||||||| ||| ||||||||||| Sbjct: 15400 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 15341 Query: 217 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 276 |||||||||||||||||||||| ||| | |||||||||||||||||||||||| ||| Sbjct: 15340 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 15281 Query: 277 cgtccaggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaact 336 |||| ||||| ||||||| ||||| |||||||| |||||||||||||||||||| || Sbjct: 15280 cgtcgaggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtacc 15221 Query: 337 tggcctccgccgacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagg 396 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 15220 gggcctccgccgacgcctcgcagccatcgacgtggaagccccggtaggaggcgacgaacg 15161 Query: 397 gcgccttggaccagtccgtcttctcccgccc 427 ||||| |||||||| |||||||||||||| Sbjct: 15160 gcgcccgcgaccagtcggtcttctcccgccc 15130
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 299 bits (151), Expect = 4e-78 Identities = 241/271 (88%) Strand = Plus / Minus Query: 157 ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 216 ||||| ||||||||||||| | |||||||||||||||||||| ||| ||||||||||| Sbjct: 19012583 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 19012524 Query: 217 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 276 |||||||||||||||||||||| ||| | |||||||||||||||||||||||| ||| Sbjct: 19012523 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 19012464 Query: 277 cgtccaggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaact 336 |||| ||||| ||||||| ||||| |||||||| |||||||||||||||||||| || Sbjct: 19012463 cgtcgaggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtacc 19012404 Query: 337 tggcctccgccgacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagg 396 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 19012403 gggcctccgccgacgcctcgcagccatcgacgtggaagccccggtaggaggcgacgaacg 19012344 Query: 397 gcgccttggaccagtccgtcttctcccgccc 427 ||||| |||||||| |||||||||||||| Sbjct: 19012343 gcgcccgcgaccagtcggtcttctcccgccc 19012313
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 299 bits (151), Expect = 4e-78 Identities = 241/271 (88%) Strand = Plus / Minus Query: 157 ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 216 ||||| ||||||||||||| | |||||||||||||||||||| ||| ||||||||||| Sbjct: 916 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 857 Query: 217 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 276 |||||||||||||||||||||| ||| | |||||||||||||||||||||||| ||| Sbjct: 856 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 797 Query: 277 cgtccaggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaact 336 |||| ||||| ||||||| ||||| |||||||| |||||||||||||||||||| || Sbjct: 796 cgtcgaggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtacc 737 Query: 337 tggcctccgccgacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagg 396 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 736 gggcctccgccgacgcctcgcagccatcgacgtggaagccccggtaggaggcgacgaacg 677 Query: 397 gcgccttggaccagtccgtcttctcccgccc 427 ||||| |||||||| |||||||||||||| Sbjct: 676 gcgcccgcgaccagtcggtcttctcccgccc 646
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 299 bits (151), Expect = 4e-78 Identities = 241/271 (88%) Strand = Plus / Minus Query: 157 ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 216 ||||| ||||||||||||| | |||||||||||||||||||| ||| ||||||||||| Sbjct: 19171232 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 19171173 Query: 217 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 276 |||||||||||||||||||||| ||| | |||||||||||||||||||||||| ||| Sbjct: 19171172 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 19171113 Query: 277 cgtccaggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaact 336 |||| ||||| ||||||| ||||| |||||||| |||||||||||||||||||| || Sbjct: 19171112 cgtcgaggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtacc 19171053 Query: 337 tggcctccgccgacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagg 396 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 19171052 gggcctccgccgacgcctcgcagccatcgacgtggaagccccggtaggaggcgacgaacg 19170993 Query: 397 gcgccttggaccagtccgtcttctcccgccc 427 ||||| |||||||| |||||||||||||| Sbjct: 19170992 gcgcccgcgaccagtcggtcttctcccgccc 19170962
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 291 bits (147), Expect = 1e-75 Identities = 240/271 (88%) Strand = Plus / Minus Query: 157 ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 216 ||||| ||||||||||||| | |||||||||||||||||||| ||| ||||||||||| Sbjct: 913 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 854 Query: 217 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 276 |||||||||||||||||||||| ||| | |||||||||||||||||||||||| ||| Sbjct: 853 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 794 Query: 277 cgtccaggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaact 336 |||| ||||| ||||||| ||||| |||||||| |||||||||||||||||||| || Sbjct: 793 cgtcgaggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtacc 734 Query: 337 tggcctccgccgacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagg 396 | |||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 733 ggtcctccgccgacgcctcgcagccatcgacgtggaagccccggtaggaggcgacgaacg 674 Query: 397 gcgccttggaccagtccgtcttctcccgccc 427 ||||| |||||||| |||||||||||||| Sbjct: 673 gcgcccgcgaccagtcggtcttctcccgccc 643
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 242 bits (122), Expect = 8e-61 Identities = 249/288 (86%), Gaps = 5/288 (1%) Strand = Plus / Minus Query: 158 tcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcg---tatcgttcgcggtc 214 |||||||||||||||||| ||||||||||| || ||||||| || || ||||| || Sbjct: 941 tcagacgtcgcggtcgcgggcgcactcgggcggcacggcggcgccgtagcggtcgcgatc 882 Query: 215 tgtgcagtagttgtagatggtgt-gctccttcctgacccaggcgaggcggcggtactgcg 273 |||||||||||||||||||||| || | ||||||| ||| |||||||||||||||| Sbjct: 881 ggtgcagtagttgtagatggtgtagcggcg-cctgacctcggccaggcggcggtactgcg 823 Query: 274 cggcgtccaggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcaca 333 ||||||| |||||| |||||| ||||| ||||||||||| ||||||||||||||||| | Sbjct: 822 cggcgtcgaggtccctgaactccggctggtcccaccagcgcgcgccctgggtggcgcaga 763 Query: 334 acttggcctccgccgacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacga 393 | |||||||| || |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 762 agcgcgcctccgcggaggcctcgcagccgtcgacgtggaagccgcggtaggaggcgacga 703 Query: 394 agggcgccttggaccagtccgtcttctcccgccctccccgagtcgccc 441 ||||||| |||||||||||||||||||| ||||| || || ||||||| Sbjct: 702 agggcgcgttggaccagtccgtcttctcgcgcccgccgcgggtcgccc 655
>dbj|AB196974.1| Sagittaria pygmaea SpXTH1 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1101 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 318 ccctgggtggcgcacaacttggcctccgccgacgcctcgcagccgtcgacgtggaagccc 377 ||||| |||||||| |||| ||| || | |||| |||||| ||||||| |||||||| | Sbjct: 858 ccctgcgtggcgcagaactgggctgccactgacgactcgcacccgtcgatgtggaagctc 799 Query: 378 cggtaggaggcgacgaagggcgccttggaccagtccgtcttctc 421 ||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 798 cggtacgacgcgacgaagggcgccttggaccagtcggtcttctc 755
>gb|AF052194.1|AF052194 Actinidia deliciosa xyloglucan endotransglycosylase precursor (XET) mRNA, partial cds Length = 789 Score = 93.7 bits (47), Expect = 5e-16 Identities = 104/123 (84%) Strand = Plus / Minus Query: 299 ctgatcccaccagcgggcgccctgggtggcgcacaacttggcctccgccgacgcctcgca 358 ||||||||||||||| ||||||||||||||| |||||||||||| |||| || ||||| Sbjct: 720 ctgatcccaccagcgcttgccctgggtggcgcagaacttggcctccaccgaggcttcgca 661 Query: 359 gccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccgtctt 418 ||||||| ||||| | | ||||| ||| |||||||| |||||||||||||| || || Sbjct: 660 accgtcgatatggaaactcttgtaggcggccacgaagggggccttggaccagtctgtttt 601 Query: 419 ctc 421 ||| Sbjct: 600 ctc 598
>emb|AJ811689.1| Pyrus communis xet gene for xyloglucan endotransglycosilase, exon 1 Length = 1007 Score = 87.7 bits (44), Expect = 3e-14 Identities = 104/124 (83%) Strand = Plus / Minus Query: 318 ccctgggtggcgcacaacttggcctccgccgacgcctcgcagccgtcgacgtggaagccc 377 ||||||||||| || |||||||| || | || |||||||||||||||| |||||||||| Sbjct: 824 ccctgggtggcacaaaacttggcttcgacggaggcctcgcagccgtcgatgtggaagccc 765 Query: 378 cggtaggaggcgacgaagggcgccttggaccagtccgtcttctcccgccctccccgagtc 437 |||||| ||||| ||| || ||||||||||| || ||||| ||| | || |||||||| Sbjct: 764 cggtagctggcgatgaacggggccttggaccaatcggtcttttccagaccaccccgagta 705 Query: 438 gccc 441 |||| Sbjct: 704 gccc 701 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tgcagtagttgtagatggtg 236 |||||||||||||||||||| Sbjct: 925 tgcagtagttgtagatggtg 906
>dbj|AB095368.1| Pyrus communis PC-XET1 mRNA for xyloglucan endotransglycosylase, partial cds Length = 1292 Score = 87.7 bits (44), Expect = 3e-14 Identities = 104/124 (83%) Strand = Plus / Minus Query: 318 ccctgggtggcgcacaacttggcctccgccgacgcctcgcagccgtcgacgtggaagccc 377 ||||||||||| || |||||||| || | || |||||||||||||||| |||||||||| Sbjct: 848 ccctgggtggcacaaaacttggcttcgacggaggcctcgcagccgtcgatgtggaagccc 789 Query: 378 cggtaggaggcgacgaagggcgccttggaccagtccgtcttctcccgccctccccgagtc 437 |||||| ||||| ||| || ||||||||||| || ||||| ||| | || |||||||| Sbjct: 788 cggtagctggcgatgaacggggccttggaccaatcggtcttttccagaccaccccgagta 729 Query: 438 gccc 441 |||| Sbjct: 728 gccc 725 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tgcagtagttgtagatggtg 236 |||||||||||||||||||| Sbjct: 949 tgcagtagttgtagatggtg 930
>gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase hydrolase mRNA, complete cds Length = 1130 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 334 acttggcctccgccgacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacga 393 ||||||| ||| ||||||||||||||||||||| |||||||||| |||| ||| |||| Sbjct: 750 acttggcttccaccgacgcctcgcagccgtcgatatggaagcccctataggtggccacga 691 Query: 394 agggcgccttggaccagtccgtcttctc 421 |||| ||||| |||||||| |||||||| Sbjct: 690 agggagccttagaccagtcagtcttctc 663 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 gtgcagtagttgtagatggtg 236 ||||||||||||||||||||| Sbjct: 868 gtgcagtagttgtagatggtg 848
>gb|AF515607.1| Populus tremula x Populus tremuloides xyloglucan endotransglycosylase precursor (XET16A) mRNA, complete cds Length = 1267 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 318 ccctgggtggcgcacaacttggcctccgccgacgcctcgcagccgtcgacgtggaagccc 377 ||||| |||||||| |||||||| ||| | || |||||||| || || | |||||||| | Sbjct: 787 ccctgtgtggcgcagaacttggcttccacggaggcctcgcacccatctatgtggaagctc 728 Query: 378 cggtaggaggcgacgaagggcgccttggaccagtccgtcttctc 421 | ||||||||| | ||| || |||||||||||||| |||||||| Sbjct: 727 ctgtaggaggcaatgaacggtgccttggaccagtctgtcttctc 684
>gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase (XET01) mRNA, complete cds Length = 1268 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 318 ccctgggtggcgcacaacttggcctccgccgacgcctcgcagccgtcgacgtggaagccc 377 ||||||||||| || ||||||| || | || |||||||| ||||||| |||||||||| Sbjct: 782 ccctgggtggcacaatacttggcttcgacggaggcctcgcacccgtcgatgtggaagccc 723 Query: 378 cggtaggaggcgacgaagggcgccttggaccagtccgtctt 418 |||||| |||| ||| || |||||||||||||| ||||| Sbjct: 722 cggtagctagcgatgaacggagccttggaccagtcggtctt 682 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 210 cggtctgtgcagtagttgtagatggtg 236 ||||| ||||||||||||||||||||| Sbjct: 890 cggtcagtgcagtagttgtagatggtg 864
>ref|XM_478514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 378 cggtaggaggcgacgaagggcgccttggaccagtccgtcttctcccgccctccccgagtc 437 |||||||||| || ||| |||||||||| |||||||||||||||| |||| || || ||| Sbjct: 695 cggtaggaggagatgaacggcgccttggtccagtccgtcttctccagcccgccgcgcgtc 636 Query: 438 gccc 441 |||| Sbjct: 635 gccc 632
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 378 cggtaggaggcgacgaagggcgccttggaccagtccgtcttctcccgccctccccgagtc 437 |||||||||| || ||| |||||||||| |||||||||||||||| |||| || || ||| Sbjct: 20677203 cggtaggaggagatgaacggcgccttggtccagtccgtcttctccagcccgccgcgcgtc 20677144 Query: 438 gccc 441 |||| Sbjct: 20677143 gccc 20677140
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 378 cggtaggaggcgacgaagggcgccttggaccagtccgtcttctcccgccctccccgagtc 437 |||||||||| || ||| |||||||||| |||||||||||||||| |||| || || ||| Sbjct: 29953 cggtaggaggagatgaacggcgccttggtccagtccgtcttctccagcccgccgcgcgtc 29894 Query: 438 gccc 441 |||| Sbjct: 29893 gccc 29890
>dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P12, full insert sequence Length = 1707 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 378 cggtaggaggcgacgaagggcgccttggaccagtccgtcttctcccgccctccccgagtc 437 |||||||||| || ||| |||||||||| |||||||||||||||| |||| || || ||| Sbjct: 1274 cggtaggaggagatgaacggcgccttggtccagtccgtcttctccagcccgccgcgcgtc 1215 Query: 438 gccc 441 |||| Sbjct: 1214 gccc 1211
>gb|L46792.1|ACTXET Actinidia deliciosa clone AdXET-5 xyloglucan endotransglycosylase precursor (XET) mRNA, complete cds Length = 1178 Score = 63.9 bits (32), Expect = 4e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 318 ccctgggtggcgcacaacttggcctccgccgacgcctcgcagccgtcgacgtggaagccc 377 |||||||||||||| |||||||||||| | ||||||||||| || |||| ||||| | | Sbjct: 753 ccctgggtggcgcagaacttggcctccacagacgcctcgcaaccatcgatatggaaactc 694 Query: 378 cggtaggaggcgacgaagggcgccttggaccagtccgtcttctc 421 ||| | || |||||||| |||||||||||||| || ||||| Sbjct: 693 ttgtaagcagccacgaagggggccttggaccagtctgttttctc 650 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gtgcagtagttgtagatggt 235 |||||||||||||||||||| Sbjct: 855 gtgcagtagttgtagatggt 836
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 382 aggaggcgacgaagggcgccttggaccagtccg 414 |||||||||||||||| |||||||||||||||| Sbjct: 765 aggaggcgacgaagggggccttggaccagtccg 733
>gb|BT017470.1| Zea mays clone EL01N0408C10.c mRNA sequence Length = 878 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 390 acgaagggcgccttggaccagtccgtcttctcccgccctccccgagtcgccc 441 ||||| |||||||||| |||||||||||||||| |||| || || ||||||| Sbjct: 509 acgaacggcgccttggcccagtccgtcttctccagcccgccgcgcgtcgccc 458
>ref|XM_480875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 375 ccccggtaggaggcgacgaagggcgccttggaccagtccgtcttctcccgccctccccga 434 ||||||||| |||||| |||||| |||| ||||||||||||||| ||| ||| ||| | Sbjct: 704 ccccggtagtaggcgaagaagggtgcctccgaccagtccgtcttcaccctcccgccctgc 645 Query: 435 gtcgccc 441 ||||||| Sbjct: 644 gtcgccc 638
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 375 ccccggtaggaggcgacgaagggcgccttggaccagtccgtcttctcccgccctccccga 434 ||||||||| |||||| |||||| |||| ||||||||||||||| ||| ||| ||| | Sbjct: 8378429 ccccggtagtaggcgaagaagggtgcctccgaccagtccgtcttcaccctcccgccctgc 8378488 Query: 435 gtcgccc 441 ||||||| Sbjct: 8378489 gtcgccc 8378495 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 396 ggcgccttggaccagtccgtcttctcccgccctccc 431 ||||||| |||||||| |||||| ||||||||||| Sbjct: 8483219 ggcgcctgcgaccagtcagtcttcacccgccctccc 8483184
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 375 ccccggtaggaggcgacgaagggcgccttggaccagtccgtcttctcccgccctccccga 434 ||||||||| |||||| |||||| |||| ||||||||||||||| ||| ||| ||| | Sbjct: 118538 ccccggtagtaggcgaagaagggtgcctccgaccagtccgtcttcaccctcccgccctgc 118597 Query: 435 gtcgccc 441 ||||||| Sbjct: 118598 gtcgccc 118604
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 378 cggtaggaggcgacgaagggcgccttggaccagtc 412 ||||| || |||||||||||||||||||||||||| Sbjct: 751 cggtacgacgcgacgaagggcgccttggaccagtc 717
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 378 cggtaggaggcgacgaagggcgccttggaccagtc 412 ||||| || |||||||||||||||||||||||||| Sbjct: 766 cggtacgacgcgacgaagggcgccttggaccagtc 732
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 378 cggtaggaggcgacgaagggcgccttggaccagtc 412 ||||| || |||||||||||||||||||||||||| Sbjct: 758 cggtacgacgcgacgaagggcgccttggaccagtc 724
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 373 agccccggtaggaggcgacgaagggcgccttggaccagtcc 413 |||||||||||||| ||||||||||||| |||||||||| Sbjct: 748 agccccggtaggagacgacgaagggcgcggcggaccagtcc 708
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Minus Query: 355 cgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccg 414 ||||| ||||| ||| |||| | ||| |||||||||||||||| |||||| |||||||| Sbjct: 655 cgcaggcgtcggcgttgaagtcgcggaaggaggcgacgaagggggccttgctccagtccg 596
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Minus Query: 355 cgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccg 414 ||||| ||||| ||| |||| | ||| |||||||||||||||| |||||| |||||||| Sbjct: 28750471 cgcaggcgtcggcgttgaagtcgcggaaggaggcgacgaagggggccttgctccagtccg 28750412 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 386 ggcgacgaagggcgccttggaccagtccgtctt 418 ||||||||| || ||||||| |||||||||||| Sbjct: 13232771 ggcgacgaaaggggccttggtccagtccgtctt 13232739 Score = 40.1 bits (20), Expect = 5.9 Identities = 53/64 (82%) Strand = Plus / Plus Query: 355 cgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccg 414 ||||| ||||| || ||||||| ||||||||||| ||||||||| | | |||||||| Sbjct: 28773287 cgcaggcgtcggcgcggaagccgcggtaggaggccgagaagggcgcgtgcgtccagtccg 28773346 Query: 415 tctt 418 |||| Sbjct: 28773347 tctt 28773350
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Minus Query: 355 cgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccg 414 ||||| ||||| ||| |||| | ||| |||||||||||||||| |||||| |||||||| Sbjct: 58246 cgcaggcgtcggcgttgaagtcgcggaaggaggcgacgaagggggccttgctccagtccg 58187 Score = 40.1 bits (20), Expect = 5.9 Identities = 53/64 (82%) Strand = Plus / Plus Query: 355 cgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccg 414 ||||| ||||| || ||||||| ||||||||||| ||||||||| | | |||||||| Sbjct: 81062 cgcaggcgtcggcgcggaagccgcggtaggaggccgagaagggcgcgtgcgtccagtccg 81121 Query: 415 tctt 418 |||| Sbjct: 81122 tctt 81125
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Minus Query: 355 cgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccg 414 ||||| ||||| ||| |||| | ||| |||||||||||||||| |||||| |||||||| Sbjct: 151037 cgcaggcgtcggcgttgaagtcgcggaaggaggcgacgaagggggccttgctccagtccg 150978
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Minus Query: 355 cgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccg 414 ||||| ||||| ||| |||| | ||| |||||||||||||||| |||||| |||||||| Sbjct: 763 cgcaggcgtcggcgttgaagtcgcggaaggaggcgacgaagggggccttgctccagtccg 704
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Minus Query: 355 cgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccg 414 ||||| ||||| ||| |||| | ||| |||||||||||||||| |||||| |||||||| Sbjct: 763 cgcaggcgtcggcgttgaagtcgcggaaggaggcgacgaagggggccttgctccagtccg 704
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Minus Query: 378 cggtaggaggcgacgaagggcgccttggaccagtc 412 ||||||||| ||||||||||||| |||||||||| Sbjct: 599 cggtaggagacgacgaagggcgcgctggaccagtc 565
>gb|AY106744.1| Zea mays PCO111647 mRNA sequence Length = 1267 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Minus Query: 378 cggtaggaggcgacgaagggcgccttggaccagtc 412 ||||||||| ||||||||||||| | ||||||||| Sbjct: 739 cggtaggagacgacgaagggcgcgtcggaccagtc 705
>gb|AY105107.1| Zea mays PCO140468 mRNA sequence Length = 1297 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Minus Query: 378 cggtaggaggcgacgaagggcgccttggaccagtc 412 ||||||||| ||||||||||||| |||||||||| Sbjct: 763 cggtaggagacgacgaagggcgcgctggaccagtc 729
>ref|NM_121390.3| Arabidopsis thaliana EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT5G13870 (EXGT-A4) mRNA, complete cds Length = 1386 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 208 cgcggtctgtgcagtagttgtagatggtgt 237 ||||||| ||||| |||||||||||||||| Sbjct: 1229 cgcggtcagtgcaatagttgtagatggtgt 1200
>gb|AY043238.1| Vitis vinifera xyloglucan endotransglycosylase XET2 mRNA, partial cds Length = 478 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 399 gccttggaccagtccgtcttctcccgccctcccc 432 |||||||||||||| ||||||||| |||| |||| Sbjct: 309 gccttggaccagtcggtcttctccagcccacccc 276
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.38 Identities = 55/66 (83%) Strand = Plus / Minus Query: 353 ctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtc 412 ||||||| |||||| || || ||| ||||| ||||||||| ||||||||| |||||| Sbjct: 10359969 ctcgcagacgtcgaggtcgatgccgtggtagttggcgacgaacggcgccttgctccagtc 10359910 Query: 413 cgtctt 418 |||||| Sbjct: 10359909 cgtctt 10359904
>emb|BX830569.1|CNS0A1EU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB90ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1347 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 208 cgcggtctgtgcagtagttgtagatggtgt 237 ||||||| ||||| |||||||||||||||| Sbjct: 1229 cgcggtcagtgcaatagttgtagatggtgt 1200
>emb|BX831074.1|CNS0A0QQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS55ZF02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1362 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 208 cgcggtctgtgcagtagttgtagatggtgt 237 ||||||| ||||| |||||||||||||||| Sbjct: 1220 cgcggtcagtgcaatagttgtagatggtgt 1191
>dbj|AK176228.1| Arabidopsis thaliana mRNA for endoxyloglucan transferase, complete cds, clone: RAFL23-11-K19 Length = 1028 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 208 cgcggtctgtgcagtagttgtagatggtgt 237 ||||||| ||||| |||||||||||||||| Sbjct: 852 cgcggtcagtgcaatagttgtagatggtgt 823
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 44.1 bits (22), Expect = 0.38 Identities = 55/66 (83%) Strand = Plus / Minus Query: 353 ctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtc 412 ||||||| |||||| || || ||| ||||| ||||||||| ||||||||| |||||| Sbjct: 2391 ctcgcagacgtcgaggtcgatgccgtggtagttggcgacgaacggcgccttgctccagtc 2332 Query: 413 cgtctt 418 |||||| Sbjct: 2331 cgtctt 2326
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 44.1 bits (22), Expect = 0.38 Identities = 55/66 (83%) Strand = Plus / Minus Query: 353 ctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtc 412 ||||||| |||||| || || ||| ||||| ||||||||| ||||||||| |||||| Sbjct: 125779 ctcgcagacgtcgaggtcgatgccgtggtagttggcgacgaacggcgccttgctccagtc 125720 Query: 413 cgtctt 418 |||||| Sbjct: 125719 cgtctt 125714
>dbj|AB005230.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAC12 Length = 74613 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 208 cgcggtctgtgcagtagttgtagatggtgt 237 ||||||| ||||| |||||||||||||||| Sbjct: 25611 cgcggtcagtgcaatagttgtagatggtgt 25640
>gb|AF163822.1|AF163822 Arabidopsis thaliana endoxyloglucan transferase (EXGT-A4) gene, complete cds Length = 2645 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 208 cgcggtctgtgcagtagttgtagatggtgt 237 ||||||| ||||| |||||||||||||||| Sbjct: 2377 cgcggtcagtgcaatagttgtagatggtgt 2348
>dbj|AB086395.1| Vigna angularis VaXTH1 gene for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1913 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 216 gtgcagtagttgtagatggtgt 237 |||||||||||||||||||||| Sbjct: 1607 gtgcagtagttgtagatggtgt 1586
>dbj|D16458.1|VIREXT5 V.angularis mRNA for endo-xyloglucan transferase, complete cds Length = 1319 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 216 gtgcagtagttgtagatggtgt 237 |||||||||||||||||||||| Sbjct: 996 gtgcagtagttgtagatggtgt 975
>dbj|D16455.1|SOYEXT2 Soybean mRNA for endo-xyloglucan transferase, partial cds Length = 975 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 216 gtgcagtagttgtagatggtgt 237 |||||||||||||||||||||| Sbjct: 829 gtgcagtagttgtagatggtgt 808
>dbj|AB026486.1| Arabidopsis thaliana EXGT-A4 mRNA for endoxyloglucan transferase, complete cds Length = 1050 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 208 cgcggtctgtgcagtagttgtagatggtgt 237 ||||||| ||||| |||||||||||||||| Sbjct: 872 cgcggtcagtgcaatagttgtagatggtgt 843
>gb|AY841854.1| Vigna radiata xyloglucan endotransglucosylase/hydrolase precursor (XTH1) mRNA, complete cds Length = 1112 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 gtgcagtagttgtagatggtg 236 ||||||||||||||||||||| Sbjct: 809 gtgcagtagttgtagatggtg 789
>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein Length = 1187 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 382 aggaggcgacgaagggcgccttggaccagtccgtctt 418 |||| |||||||||||||| | |||||||||||||| Sbjct: 760 aggacgcgacgaagggcgcgtgtgaccagtccgtctt 724
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 382 aggaggcgacgaagggcgccttggaccagtccgtctt 418 ||||||||||||| ||||||||| |||||| ||||| Sbjct: 740 aggaggcgacgaacggcgccttgctccagtcggtctt 704
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 agcgggcgccctgggtggcgc 330 ||||||||||||||||||||| Sbjct: 311269 agcgggcgccctgggtggcgc 311249
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 405 gaccagtccgtcttctcccgccctccccgagtcgccc 441 ||||||||||||||| ||||||| ||| | ||||||| Sbjct: 76510 gaccagtccgtcttcacccgcccgccctgcgtcgccc 76474
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 263 gcggtactgcgcggcgtccaggtcc 287 ||||| ||||||||||||||||||| Sbjct: 2666683 gcggttctgcgcggcgtccaggtcc 2666707
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 405 gaccagtccgtcttctcccgccctccccgagtcgccc 441 ||||||||||||||| ||||||| ||| | ||||||| Sbjct: 32180821 gaccagtccgtcttcacccgcccgccctgcgtcgccc 32180785 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 387 gcgacgaagggcgccttggaccagtccgtctt 418 |||||||| ||||||| |||||||||||||| Sbjct: 30516565 gcgacgaacggcgcctgcgaccagtccgtctt 30516596
>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1181 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 gtctgtgcagtagttgtagat 232 ||||||||||||||||||||| Sbjct: 1065 gtctgtgcagtagttgtagat 1045
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 382 aggaggcgacgaagggcgccttggaccagtccgtctt 418 ||||||||||||| ||||||||| |||||| ||||| Sbjct: 634 aggaggcgacgaacggcgccttgctccagtcggtctt 598
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 386 ggcgacgaagggcgccttggaccagtccgtctt 418 ||||||||| || ||||||| |||||||||||| Sbjct: 149959 ggcgacgaaaggggccttggtccagtccgtctt 149927
>dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P08, full insert sequence Length = 1199 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 405 gaccagtccgtcttctcccgccctccccgagtcgccc 441 ||||||||||||||| ||||||| ||| | ||||||| Sbjct: 732 gaccagtccgtcttcacccgcccgccctgcgtcgccc 696
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 386 ggcgacgaagggcgccttggaccagtccgtctt 418 ||||||||| || ||||||| |||||||||||| Sbjct: 987 ggcgacgaaaggggccttggtccagtccgtctt 955
>dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C07, full insert sequence Length = 1279 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 405 gaccagtccgtcttctcccgccctccccgagtcgccc 441 ||||||||||||||| ||||||| ||| | ||||||| Sbjct: 736 gaccagtccgtcttcacccgcccgccctgcgtcgccc 700
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 373 agccccggtaggaggcgacgaagggcgccttggaccagtcc 413 ||||||| |||||| ||||||||||||| |||||||||| Sbjct: 775 agccccgttaggagacgacgaagggcgcggcggaccagtcc 735
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 378 cggtaggaggcgacgaagggcgccttggaccagtccgtctt 418 |||||||||||| |||||| || | ||||||||||||||| Sbjct: 787 cggtaggaggcggagaagggggcgtgggaccagtccgtctt 747
>dbj|AB086396.1| Vigna angularis VaXTH2 gene for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1712 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 gtgcagtagttgtagatggtg 236 ||||||||||||||||||||| Sbjct: 1446 gtgcagtagttgtagatggtg 1426
>ref|XM_480898.1| Oryza sativa (japonica cultivar-group), mRNA Length = 861 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 396 ggcgccttggaccagtccgtcttctcccgccctccc 431 ||||||| |||||||| |||||| ||||||||||| Sbjct: 641 ggcgcctgcgaccagtcagtcttcacccgccctccc 606
>ref|XM_527961.1| PREDICTED: Pan troglodytes similar to Sonic hedgehog protein precursor (SHH) (LOC472586), mRNA Length = 3822 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 acaacttggcctccgccgac 350 |||||||||||||||||||| Sbjct: 1322 acaacttggcctccgccgac 1341
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 387 gcgacgaagggcgccttggaccagtccgtctt 418 |||||||| ||||||| |||||||||||||| Sbjct: 635 gcgacgaacggcgcctgcgaccagtccgtctt 604
>ref|XM_362730.1| Magnaporthe grisea 70-15 hypothetical protein (MG08318.4) partial mRNA Length = 816 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 266 gtactgcgcggcgtccaggtcctggaactcgg 297 |||| |||| |||||||||||| ||||||||| Sbjct: 366 gtacagcgccgcgtccaggtccaggaactcgg 335
>gb|AC140216.3| Mus musculus BAC clone RP23-276B20 from chromosome 5, complete sequence Length = 194560 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 cacgcatgagcatacagaca 35 |||||||||||||||||||| Sbjct: 9765 cacgcatgagcatacagaca 9784
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 343 ccgccgacgcctcgcagccgtcgacgtg 370 |||||| ||||||||||||| ||||||| Sbjct: 12643798 ccgccgccgcctcgcagccggcgacgtg 12643771
>gb|AC078834.5| Homo sapiens BAC clone RP11-69O3 from 7, complete sequence Length = 154737 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 acaacttggcctccgccgac 350 |||||||||||||||||||| Sbjct: 100604 acaacttggcctccgccgac 100585
>gb|AY422195.1| Homo sapiens sonic hedgehog homolog (Drosophila) (SHH) gene, complete cds Length = 13414 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 acaacttggcctccgccgac 350 |||||||||||||||||||| Sbjct: 5477 acaacttggcctccgccgac 5496
>gb|DQ439862.1| Capsicum annuum xyloglucan endotransglucosylase XET3 mRNA, complete cds Length = 1088 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 403 tggaccagtccgtcttctcccgccctcc 430 ||||||||||||||||| ||| |||||| Sbjct: 676 tggaccagtccgtcttcacccaccctcc 649
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 387 gcgacgaagggcgccttggaccagtccgtctt 418 |||||||| ||||||| |||||||||||||| Sbjct: 149942 gcgacgaacggcgcctgcgaccagtccgtctt 149973
>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0030D15, from chromosome 3, complete sequence Length = 151972 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 343 ccgccgacgcctcgcagccgtcgacgtg 370 |||||| ||||||||||||| ||||||| Sbjct: 33191 ccgccgccgcctcgcagccggcgacgtg 33218
>dbj|AK140479.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930008M23 product:Similar to dynein heavy chain at 16F homolog [Homo sapiens], full insert sequence Length = 4389 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 tgtgctccttcctgacccag 254 |||||||||||||||||||| Sbjct: 90 tgtgctccttcctgacccag 71
>gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosylase mRNA, complete cds Length = 1162 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 387 gcgacgaagggcgccttggaccagtccgtctt 418 |||||||| ||||||| |||||||||||||| Sbjct: 707 gcgacgaacggcgcctgcgaccagtccgtctt 676
>gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold Length = 501879 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 tacagacacgtagggataca 47 |||||||||||||||||||| Sbjct: 498467 tacagacacgtagggataca 498448
>gb|AC161058.2| Mus musculus BAC clone RP23-205J6 from chromosome 5, complete sequence Length = 222180 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 cacgcatgagcatacagaca 35 |||||||||||||||||||| Sbjct: 82293 cacgcatgagcatacagaca 82274
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 ctccgccgacgcctcgcagc 360 |||||||||||||||||||| Sbjct: 5286618 ctccgccgacgcctcgcagc 5286637
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 343 ccgccgacgcctcgcagccgtcgacgtg 370 |||||| ||||||||||||| ||||||| Sbjct: 12640561 ccgccgccgcctcgcagccggcgacgtg 12640534
>gb|AC147335.2| Pan troglodytes BAC clone RP43-4C1 from chromosome 7, complete sequence Length = 186272 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 acaacttggcctccgccgac 350 |||||||||||||||||||| Sbjct: 22172 acaacttggcctccgccgac 22191
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 396 ggcgccttggaccagtccgtcttctcccgccctccc 431 ||||||| |||||||| |||||| ||||||||||| Sbjct: 98936 ggcgcctgcgaccagtcagtcttcacccgccctccc 98901
>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0031C02 Length = 138843 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 396 ggcgccttggaccagtccgtcttctcccgccctccc 431 ||||||| |||||||| |||||| ||||||||||| Sbjct: 12762 ggcgcctgcgaccagtcagtcttcacccgccctccc 12727
>dbj|AK110771.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-A12, full insert sequence Length = 852 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 343 ccgccgacgcctcgcagccgtcgacgtg 370 |||||| ||||||||||||| ||||||| Sbjct: 328 ccgccgccgcctcgcagccggcgacgtg 355
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 40.1 bits (20), Expect = 5.9 Identities = 53/64 (82%) Strand = Plus / Minus Query: 355 cgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccg 414 ||||| ||||| || ||||||| ||||||||||| ||||||||| | | |||||||| Sbjct: 770 cgcaggcgtcggcgcggaagccgcggtaggaggccgagaagggcgcgtgcgtccagtccg 711 Query: 415 tctt 418 |||| Sbjct: 710 tctt 707
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 387 gcgacgaagggcgccttggaccagtccgtctt 418 |||||||| ||||||| |||||||||||||| Sbjct: 725 gcgacgaacggcgcctgcgaccagtccgtctt 694
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 gcgcggcgtccaggtcctgg 290 |||||||||||||||||||| Sbjct: 4628592 gcgcggcgtccaggtcctgg 4628573
>gb|AC122201.4| Mus musculus BAC clone RP23-64I9 from 6, complete sequence Length = 239994 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 tgtgctccttcctgacccag 254 |||||||||||||||||||| Sbjct: 195584 tgtgctccttcctgacccag 195565
>gb|AC002484.1|AC002484 Human cosmid clone LL157A05 from 7q36, complete sequence Length = 48469 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 acaacttggcctccgccgac 350 |||||||||||||||||||| Sbjct: 14988 acaacttggcctccgccgac 14969 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,180,659 Number of Sequences: 3902068 Number of extensions: 3180659 Number of successful extensions: 52464 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51912 Number of HSP's gapped (non-prelim): 549 length of query: 441 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 419 effective length of database: 17,147,199,772 effective search space: 7184676704468 effective search space used: 7184676704468 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)