ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast57a03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transfe... 874 0.0
2dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase,... 470 e-129
3gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome... 299 4e-78
4gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome... 299 4e-78
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 299 4e-78
6dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 4e-78
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 299 4e-78
8dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 1e-75
9gb|AY104207.1| Zea mays PCO111099 mRNA sequence 242 8e-61
10dbj|AB196974.1| Sagittaria pygmaea SpXTH1 mRNA for xyloglucan en... 96 1e-16
11gb|AF052194.1|AF052194 Actinidia deliciosa xyloglucan endotransg... 94 5e-16
12emb|AJ811689.1| Pyrus communis xet gene for xyloglucan endotrans... 88 3e-14
13dbj|AB095368.1| Pyrus communis PC-XET1 mRNA for xyloglucan endot... 88 3e-14
14gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase... 88 3e-14
15gb|AF515607.1| Populus tremula x Populus tremuloides xyloglucan ... 72 2e-09
16gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase... 66 1e-07
17ref|XM_478514.1| Oryza sativa (japonica cultivar-group), mRNA 64 4e-07
18dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
19dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
20dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
21gb|L46792.1|ACTXET Actinidia deliciosa clone AdXET-5 xyloglucan ... 64 4e-07
22gb|AY103891.1| Zea mays PCO065722 mRNA sequence 58 3e-05
23gb|BT017470.1| Zea mays clone EL01N0408C10.c mRNA sequence 56 1e-04
24ref|XM_480875.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-04
25dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
26dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
27gb|AY105365.1| Zea mays PCO092487 mRNA sequence 54 4e-04
28gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase h... 54 4e-04
29gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase h... 54 4e-04
30emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosyla... 50 0.006
31gb|BT014685.1| Oryza sativa AK104912 mRNA sequence 48 0.024
32dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.024
33dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.024
34dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.024
35dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.024
36dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.024
37gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence 46 0.096
38gb|AY106744.1| Zea mays PCO111647 mRNA sequence 46 0.096
39gb|AY105107.1| Zea mays PCO140468 mRNA sequence 46 0.096
40ref|NM_121390.3| Arabidopsis thaliana EXGT-A4 (ENDOXYLOGLUCAN TR... 44 0.38
41gb|AY043238.1| Vitis vinifera xyloglucan endotransglycosylase XE... 44 0.38
42dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
43emb|BX830569.1|CNS0A1EU Arabidopsis thaliana Full-length cDNA Co... 44 0.38
44emb|BX831074.1|CNS0A0QQ Arabidopsis thaliana Full-length cDNA Co... 44 0.38
45dbj|AK176228.1| Arabidopsis thaliana mRNA for endoxyloglucan tra... 44 0.38
46dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
47dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
48dbj|AB005230.2| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.38
49gb|AF163822.1|AF163822 Arabidopsis thaliana endoxyloglucan trans... 44 0.38
50dbj|AB086395.1| Vigna angularis VaXTH1 gene for xyloglucan endot... 44 0.38
51dbj|D16458.1|VIREXT5 V.angularis mRNA for endo-xyloglucan transf... 44 0.38
52dbj|D16455.1|SOYEXT2 Soybean mRNA for endo-xyloglucan transferas... 44 0.38
53dbj|AB026486.1| Arabidopsis thaliana EXGT-A4 mRNA for endoxylogl... 44 0.38
54gb|AY841854.1| Vigna radiata xyloglucan endotransglucosylase/hyd... 42 1.5
55emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein 42 1.5
56emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransgly... 42 1.5
57emb|BX640418.1| Bordetella pertussis strain Tohama I, complete g... 42 1.5
58emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4,... 42 1.5
59gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 1.5
60dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
61dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan en... 42 1.5
62gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase ... 42 1.5
63dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
64dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
65dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
66dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
67gb|AY107002.1| Zea mays PCO111646 mRNA sequence 42 1.5
68gb|AY103775.1| Zea mays PCO076979 mRNA sequence 42 1.5
69dbj|AB086396.1| Vigna angularis VaXTH2 gene for xyloglucan endot... 42 1.5
70ref|XM_480898.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.9
71ref|XM_527961.1| PREDICTED: Pan troglodytes similar to Sonic hed... 40 5.9
72ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predic... 40 5.9
73ref|XM_362730.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 5.9
74gb|AC140216.3| Mus musculus BAC clone RP23-276B20 from chromosom... 40 5.9
75gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.9
76gb|AC078834.5| Homo sapiens BAC clone RP11-69O3 from 7, complete... 40 5.9
77gb|AY422195.1| Homo sapiens sonic hedgehog homolog (Drosophila) ... 40 5.9
78gb|DQ439862.1| Capsicum annuum xyloglucan endotransglucosylase X... 40 5.9
79emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4,... 40 5.9
80gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 5.9
81dbj|AK140479.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 40 5.9
82gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosyl... 40 5.9
83gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold 40 5.9
84gb|AC161058.2| Mus musculus BAC clone RP23-205J6 from chromosome... 40 5.9
85gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 5.9
86dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
87gb|AC147335.2| Pan troglodytes BAC clone RP43-4C1 from chromosom... 40 5.9
88dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
89dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
90dbj|AK110771.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
91dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
92dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
93gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.9
94gb|AC122201.4| Mus musculus BAC clone RP23-64I9 from 6, complete... 40 5.9
95gb|AC002484.1|AC002484 Human cosmid clone LL157A05 from 7q36, co... 40 5.9

>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase
          Length = 1175

 Score =  874 bits (441), Expect = 0.0
 Identities = 441/441 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    agaagaataataaagcacgcatgagcatacagacacgtagggatacaaattcctcgtact 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 agaagaataataaagcacgcatgagcatacagacacgtagggatacaaattcctcgtact 1062

                                                                        
Query: 61   agtacatctcatcgaccgcaccgcgaccggtggtacaacaacaactactgtagtagcggt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 agtacatctcatcgaccgcaccgcgaccggtggtacaacaacaactactgtagtagcggt 1002

                                                                        
Query: 121  cctttacatcagtagtagtaagtaaagtatatcacgctcagacgtcgcggtcgcgtttgc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 cctttacatcagtagtagtaagtaaagtatatcacgctcagacgtcgcggtcgcgtttgc 942

                                                                        
Query: 181  actcgggcgacatggcggcgtatcgttcgcggtctgtgcagtagttgtagatggtgtgct 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941  actcgggcgacatggcggcgtatcgttcgcggtctgtgcagtagttgtagatggtgtgct 882

                                                                        
Query: 241  ccttcctgacccaggcgaggcggcggtactgcgcggcgtccaggtcctggaactcgggct 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881  ccttcctgacccaggcgaggcggcggtactgcgcggcgtccaggtcctggaactcgggct 822

                                                                        
Query: 301  gatcccaccagcgggcgccctgggtggcgcacaacttggcctccgccgacgcctcgcagc 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821  gatcccaccagcgggcgccctgggtggcgcacaacttggcctccgccgacgcctcgcagc 762

                                                                        
Query: 361  cgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccgtcttct 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761  cgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccgtcttct 702

                                 
Query: 421  cccgccctccccgagtcgccc 441
            |||||||||||||||||||||
Sbjct: 701  cccgccctccccgagtcgccc 681



to top

>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds
          Length = 1088

 Score =  470 bits (237), Expect = e-129
 Identities = 273/285 (95%)
 Strand = Plus / Minus

                                                                       
Query: 157 ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 216
           ||||||||||||||||||| |||||||| |||| |||||||||||| || ||| |||| |
Sbjct: 926 ctcagacgtcgcggtcgcgcttgcactctggcgccatggcggcgtagcggtcgtggtcgg 867

                                                                       
Query: 217 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 276
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 807

                                                                       
Query: 277 cgtccaggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaact 336
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 806 cgtccaggtcctggaactcgggctggtcccaccagcgggcgccctgggtggcgcagaact 747

                                                                       
Query: 337 tggcctccgccgacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagg 396
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tggcctccgcggacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagg 687

                                                        
Query: 397 gcgccttggaccagtccgtcttctcccgccctccccgagtcgccc 441
           ||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 686 gcgccttggaccagtccgtcttctcccgcccgccccgggtcgccc 642



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                        
Query: 37   gtagggatacaaattcctcgtactagtacatctcatcgaccgcaccgcgaccggtggtac 96
            ||||||||||||||||||||||||| ||  ||||| |||||||||||||||| | || ||
Sbjct: 1039 gtagggatacaaattcctcgtactactaggtctcagcgaccgcaccgcgaccagcggcac 980

                       
Query: 97   aacaacaacta 107
            |||||||||||
Sbjct: 979  aacaacaacta 969



to top

>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17,
              complete sequence
          Length = 148829

 Score =  299 bits (151), Expect = 4e-78
 Identities = 241/271 (88%)
 Strand = Plus / Minus

                                                                          
Query: 157    ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 216
              ||||| ||||||||||||| | |||||||||||||||||||| ||| |||||||||||  
Sbjct: 115781 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 115722

                                                                          
Query: 217    tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 276
               ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||  |||
Sbjct: 115721 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 115662

                                                                          
Query: 277    cgtccaggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaact 336
              |||| |||||  ||||||| ||||| |||||||| ||||||||||||||||||||  || 
Sbjct: 115661 cgtcgaggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtacc 115602

                                                                          
Query: 337    tggcctccgccgacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagg 396
               |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 115601 gggcctccgccgacgcctcgcagccatcgacgtggaagccccggtaggaggcgacgaacg 115542

                                             
Query: 397    gcgccttggaccagtccgtcttctcccgccc 427
              |||||   |||||||| ||||||||||||||
Sbjct: 115541 gcgcccgcgaccagtcggtcttctcccgccc 115511



to top

>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0007D07, complete sequence
          Length = 133930

 Score =  299 bits (151), Expect = 4e-78
 Identities = 241/271 (88%)
 Strand = Plus / Minus

                                                                         
Query: 157   ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 216
             ||||| ||||||||||||| | |||||||||||||||||||| ||| |||||||||||  
Sbjct: 15400 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 15341

                                                                         
Query: 217   tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 276
              ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||  |||
Sbjct: 15340 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 15281

                                                                         
Query: 277   cgtccaggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaact 336
             |||| |||||  ||||||| ||||| |||||||| ||||||||||||||||||||  || 
Sbjct: 15280 cgtcgaggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtacc 15221

                                                                         
Query: 337   tggcctccgccgacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagg 396
              |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 15220 gggcctccgccgacgcctcgcagccatcgacgtggaagccccggtaggaggcgacgaacg 15161

                                            
Query: 397   gcgccttggaccagtccgtcttctcccgccc 427
             |||||   |||||||| ||||||||||||||
Sbjct: 15160 gcgcccgcgaccagtcggtcttctcccgccc 15130



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  299 bits (151), Expect = 4e-78
 Identities = 241/271 (88%)
 Strand = Plus / Minus

                                                                            
Query: 157      ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 216
                ||||| ||||||||||||| | |||||||||||||||||||| ||| |||||||||||  
Sbjct: 19012583 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 19012524

                                                                            
Query: 217      tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 276
                 ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||  |||
Sbjct: 19012523 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 19012464

                                                                            
Query: 277      cgtccaggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaact 336
                |||| |||||  ||||||| ||||| |||||||| ||||||||||||||||||||  || 
Sbjct: 19012463 cgtcgaggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtacc 19012404

                                                                            
Query: 337      tggcctccgccgacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagg 396
                 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 19012403 gggcctccgccgacgcctcgcagccatcgacgtggaagccccggtaggaggcgacgaacg 19012344

                                               
Query: 397      gcgccttggaccagtccgtcttctcccgccc 427
                |||||   |||||||| ||||||||||||||
Sbjct: 19012343 gcgcccgcgaccagtcggtcttctcccgccc 19012313



to top

>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full
           insert sequence
          Length = 977

 Score =  299 bits (151), Expect = 4e-78
 Identities = 241/271 (88%)
 Strand = Plus / Minus

                                                                       
Query: 157 ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 216
           ||||| ||||||||||||| | |||||||||||||||||||| ||| |||||||||||  
Sbjct: 916 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 857

                                                                       
Query: 217 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 276
            ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||  |||
Sbjct: 856 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 797

                                                                       
Query: 277 cgtccaggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaact 336
           |||| |||||  ||||||| ||||| |||||||| ||||||||||||||||||||  || 
Sbjct: 796 cgtcgaggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtacc 737

                                                                       
Query: 337 tggcctccgccgacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagg 396
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 736 gggcctccgccgacgcctcgcagccatcgacgtggaagccccggtaggaggcgacgaacg 677

                                          
Query: 397 gcgccttggaccagtccgtcttctcccgccc 427
           |||||   |||||||| ||||||||||||||
Sbjct: 676 gcgcccgcgaccagtcggtcttctcccgccc 646



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  299 bits (151), Expect = 4e-78
 Identities = 241/271 (88%)
 Strand = Plus / Minus

                                                                            
Query: 157      ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 216
                ||||| ||||||||||||| | |||||||||||||||||||| ||| |||||||||||  
Sbjct: 19171232 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 19171173

                                                                            
Query: 217      tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 276
                 ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||  |||
Sbjct: 19171172 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 19171113

                                                                            
Query: 277      cgtccaggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaact 336
                |||| |||||  ||||||| ||||| |||||||| ||||||||||||||||||||  || 
Sbjct: 19171112 cgtcgaggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtacc 19171053

                                                                            
Query: 337      tggcctccgccgacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagg 396
                 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 19171052 gggcctccgccgacgcctcgcagccatcgacgtggaagccccggtaggaggcgacgaacg 19170993

                                               
Query: 397      gcgccttggaccagtccgtcttctcccgccc 427
                |||||   |||||||| ||||||||||||||
Sbjct: 19170992 gcgcccgcgaccagtcggtcttctcccgccc 19170962



to top

>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full
           insert sequence
          Length = 1053

 Score =  291 bits (147), Expect = 1e-75
 Identities = 240/271 (88%)
 Strand = Plus / Minus

                                                                       
Query: 157 ctcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcgtatcgttcgcggtctg 216
           ||||| ||||||||||||| | |||||||||||||||||||| ||| |||||||||||  
Sbjct: 913 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 854

                                                                       
Query: 217 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 276
            ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||  |||
Sbjct: 853 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 794

                                                                       
Query: 277 cgtccaggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcacaact 336
           |||| |||||  ||||||| ||||| |||||||| ||||||||||||||||||||  || 
Sbjct: 793 cgtcgaggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtacc 734

                                                                       
Query: 337 tggcctccgccgacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagg 396
            | |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 733 ggtcctccgccgacgcctcgcagccatcgacgtggaagccccggtaggaggcgacgaacg 674

                                          
Query: 397 gcgccttggaccagtccgtcttctcccgccc 427
           |||||   |||||||| ||||||||||||||
Sbjct: 673 gcgcccgcgaccagtcggtcttctcccgccc 643



to top

>gb|AY104207.1| Zea mays PCO111099 mRNA sequence
          Length = 1202

 Score =  242 bits (122), Expect = 8e-61
 Identities = 249/288 (86%), Gaps = 5/288 (1%)
 Strand = Plus / Minus

                                                                       
Query: 158 tcagacgtcgcggtcgcgtttgcactcgggcgacatggcggcg---tatcgttcgcggtc 214
           ||||||||||||||||||   ||||||||||| || |||||||   || || ||||| ||
Sbjct: 941 tcagacgtcgcggtcgcgggcgcactcgggcggcacggcggcgccgtagcggtcgcgatc 882

                                                                       
Query: 215 tgtgcagtagttgtagatggtgt-gctccttcctgacccaggcgaggcggcggtactgcg 273
            |||||||||||||||||||||| ||  |  |||||||  ||| ||||||||||||||||
Sbjct: 881 ggtgcagtagttgtagatggtgtagcggcg-cctgacctcggccaggcggcggtactgcg 823

                                                                       
Query: 274 cggcgtccaggtcctggaactcgggctgatcccaccagcgggcgccctgggtggcgcaca 333
           ||||||| ||||||  |||||| ||||| ||||||||||| ||||||||||||||||| |
Sbjct: 822 cggcgtcgaggtccctgaactccggctggtcccaccagcgcgcgccctgggtggcgcaga 763

                                                                       
Query: 334 acttggcctccgccgacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacga 393
           |    |||||||| || |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 762 agcgcgcctccgcggaggcctcgcagccgtcgacgtggaagccgcggtaggaggcgacga 703

                                                           
Query: 394 agggcgccttggaccagtccgtcttctcccgccctccccgagtcgccc 441
           ||||||| |||||||||||||||||||| ||||| || || |||||||
Sbjct: 702 agggcgcgttggaccagtccgtcttctcgcgcccgccgcgggtcgccc 655



to top

>dbj|AB196974.1| Sagittaria pygmaea SpXTH1 mRNA for xyloglucan
           endotransglucosylase/hydrolase, complete cds
          Length = 1101

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                       
Query: 318 ccctgggtggcgcacaacttggcctccgccgacgcctcgcagccgtcgacgtggaagccc 377
           ||||| |||||||| |||| |||  || | |||| |||||| ||||||| |||||||| |
Sbjct: 858 ccctgcgtggcgcagaactgggctgccactgacgactcgcacccgtcgatgtggaagctc 799

                                                       
Query: 378 cggtaggaggcgacgaagggcgccttggaccagtccgtcttctc 421
           ||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 798 cggtacgacgcgacgaagggcgccttggaccagtcggtcttctc 755



to top

>gb|AF052194.1|AF052194 Actinidia deliciosa xyloglucan endotransglycosylase precursor (XET)
           mRNA, partial cds
          Length = 789

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 104/123 (84%)
 Strand = Plus / Minus

                                                                       
Query: 299 ctgatcccaccagcgggcgccctgggtggcgcacaacttggcctccgccgacgcctcgca 358
           |||||||||||||||   ||||||||||||||| |||||||||||| |||| || |||||
Sbjct: 720 ctgatcccaccagcgcttgccctgggtggcgcagaacttggcctccaccgaggcttcgca 661

                                                                       
Query: 359 gccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccgtctt 418
            |||||||  ||||| | |  ||||| ||| |||||||| |||||||||||||| || ||
Sbjct: 660 accgtcgatatggaaactcttgtaggcggccacgaagggggccttggaccagtctgtttt 601

              
Query: 419 ctc 421
           |||
Sbjct: 600 ctc 598



to top

>emb|AJ811689.1| Pyrus communis xet gene for xyloglucan endotransglycosilase, exon 1
          Length = 1007

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 104/124 (83%)
 Strand = Plus / Minus

                                                                       
Query: 318 ccctgggtggcgcacaacttggcctccgccgacgcctcgcagccgtcgacgtggaagccc 377
           ||||||||||| || |||||||| ||  | || |||||||||||||||| ||||||||||
Sbjct: 824 ccctgggtggcacaaaacttggcttcgacggaggcctcgcagccgtcgatgtggaagccc 765

                                                                       
Query: 378 cggtaggaggcgacgaagggcgccttggaccagtccgtcttctcccgccctccccgagtc 437
           ||||||  ||||| ||| || ||||||||||| || ||||| ||| | || |||||||| 
Sbjct: 764 cggtagctggcgatgaacggggccttggaccaatcggtcttttccagaccaccccgagta 705

               
Query: 438 gccc 441
           ||||
Sbjct: 704 gccc 701



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 tgcagtagttgtagatggtg 236
           ||||||||||||||||||||
Sbjct: 925 tgcagtagttgtagatggtg 906



to top

>dbj|AB095368.1| Pyrus communis PC-XET1 mRNA for xyloglucan endotransglycosylase,
           partial cds
          Length = 1292

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 104/124 (83%)
 Strand = Plus / Minus

                                                                       
Query: 318 ccctgggtggcgcacaacttggcctccgccgacgcctcgcagccgtcgacgtggaagccc 377
           ||||||||||| || |||||||| ||  | || |||||||||||||||| ||||||||||
Sbjct: 848 ccctgggtggcacaaaacttggcttcgacggaggcctcgcagccgtcgatgtggaagccc 789

                                                                       
Query: 378 cggtaggaggcgacgaagggcgccttggaccagtccgtcttctcccgccctccccgagtc 437
           ||||||  ||||| ||| || ||||||||||| || ||||| ||| | || |||||||| 
Sbjct: 788 cggtagctggcgatgaacggggccttggaccaatcggtcttttccagaccaccccgagta 729

               
Query: 438 gccc 441
           ||||
Sbjct: 728 gccc 725



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 tgcagtagttgtagatggtg 236
           ||||||||||||||||||||
Sbjct: 949 tgcagtagttgtagatggtg 930



to top

>gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase hydrolase mRNA,
           complete cds
          Length = 1130

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                       
Query: 334 acttggcctccgccgacgcctcgcagccgtcgacgtggaagccccggtaggaggcgacga 393
           ||||||| ||| |||||||||||||||||||||  ||||||||||  |||| ||| ||||
Sbjct: 750 acttggcttccaccgacgcctcgcagccgtcgatatggaagcccctataggtggccacga 691

                                       
Query: 394 agggcgccttggaccagtccgtcttctc 421
           |||| ||||| |||||||| ||||||||
Sbjct: 690 agggagccttagaccagtcagtcttctc 663



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 216 gtgcagtagttgtagatggtg 236
           |||||||||||||||||||||
Sbjct: 868 gtgcagtagttgtagatggtg 848



to top

>gb|AF515607.1| Populus tremula x Populus tremuloides xyloglucan
           endotransglycosylase precursor (XET16A) mRNA, complete
           cds
          Length = 1267

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                       
Query: 318 ccctgggtggcgcacaacttggcctccgccgacgcctcgcagccgtcgacgtggaagccc 377
           ||||| |||||||| |||||||| ||| | || |||||||| || || | |||||||| |
Sbjct: 787 ccctgtgtggcgcagaacttggcttccacggaggcctcgcacccatctatgtggaagctc 728

                                                       
Query: 378 cggtaggaggcgacgaagggcgccttggaccagtccgtcttctc 421
           | ||||||||| | ||| || |||||||||||||| ||||||||
Sbjct: 727 ctgtaggaggcaatgaacggtgccttggaccagtctgtcttctc 684



to top

>gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase (XET01) mRNA,
           complete cds
          Length = 1268

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                       
Query: 318 ccctgggtggcgcacaacttggcctccgccgacgcctcgcagccgtcgacgtggaagccc 377
           ||||||||||| ||  ||||||| ||  | || |||||||| ||||||| ||||||||||
Sbjct: 782 ccctgggtggcacaatacttggcttcgacggaggcctcgcacccgtcgatgtggaagccc 723

                                                    
Query: 378 cggtaggaggcgacgaagggcgccttggaccagtccgtctt 418
           ||||||   |||| ||| || |||||||||||||| |||||
Sbjct: 722 cggtagctagcgatgaacggagccttggaccagtcggtctt 682



 Score = 46.1 bits (23), Expect = 0.096
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 210 cggtctgtgcagtagttgtagatggtg 236
           ||||| |||||||||||||||||||||
Sbjct: 890 cggtcagtgcagtagttgtagatggtg 864



to top

>ref|XM_478514.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 930

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                       
Query: 378 cggtaggaggcgacgaagggcgccttggaccagtccgtcttctcccgccctccccgagtc 437
           |||||||||| || ||| |||||||||| |||||||||||||||| |||| || || |||
Sbjct: 695 cggtaggaggagatgaacggcgccttggtccagtccgtcttctccagcccgccgcgcgtc 636

               
Query: 438 gccc 441
           ||||
Sbjct: 635 gccc 632



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                            
Query: 378      cggtaggaggcgacgaagggcgccttggaccagtccgtcttctcccgccctccccgagtc 437
                |||||||||| || ||| |||||||||| |||||||||||||||| |||| || || |||
Sbjct: 20677203 cggtaggaggagatgaacggcgccttggtccagtccgtcttctccagcccgccgcgcgtc 20677144

                    
Query: 438      gccc 441
                ||||
Sbjct: 20677143 gccc 20677140



to top

>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0681F05
          Length = 144741

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                         
Query: 378   cggtaggaggcgacgaagggcgccttggaccagtccgtcttctcccgccctccccgagtc 437
             |||||||||| || ||| |||||||||| |||||||||||||||| |||| || || |||
Sbjct: 29953 cggtaggaggagatgaacggcgccttggtccagtccgtcttctccagcccgccgcgcgtc 29894

                 
Query: 438   gccc 441
             ||||
Sbjct: 29893 gccc 29890



to top

>dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P12, full
            insert sequence
          Length = 1707

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 378  cggtaggaggcgacgaagggcgccttggaccagtccgtcttctcccgccctccccgagtc 437
            |||||||||| || ||| |||||||||| |||||||||||||||| |||| || || |||
Sbjct: 1274 cggtaggaggagatgaacggcgccttggtccagtccgtcttctccagcccgccgcgcgtc 1215

                
Query: 438  gccc 441
            ||||
Sbjct: 1214 gccc 1211



to top

>gb|L46792.1|ACTXET Actinidia deliciosa clone AdXET-5 xyloglucan endotransglycosylase
           precursor (XET) mRNA, complete cds
          Length = 1178

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                       
Query: 318 ccctgggtggcgcacaacttggcctccgccgacgcctcgcagccgtcgacgtggaagccc 377
           |||||||||||||| |||||||||||| | ||||||||||| || ||||  ||||| | |
Sbjct: 753 ccctgggtggcgcagaacttggcctccacagacgcctcgcaaccatcgatatggaaactc 694

                                                       
Query: 378 cggtaggaggcgacgaagggcgccttggaccagtccgtcttctc 421
             ||| |  || |||||||| |||||||||||||| || |||||
Sbjct: 693 ttgtaagcagccacgaagggggccttggaccagtctgttttctc 650



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 216 gtgcagtagttgtagatggt 235
           ||||||||||||||||||||
Sbjct: 855 gtgcagtagttgtagatggt 836



to top

>gb|AY103891.1| Zea mays PCO065722 mRNA sequence
          Length = 1280

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 382 aggaggcgacgaagggcgccttggaccagtccg 414
           |||||||||||||||| ||||||||||||||||
Sbjct: 765 aggaggcgacgaagggggccttggaccagtccg 733



to top

>gb|BT017470.1| Zea mays clone EL01N0408C10.c mRNA sequence
          Length = 878

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 390 acgaagggcgccttggaccagtccgtcttctcccgccctccccgagtcgccc 441
           ||||| |||||||||| |||||||||||||||| |||| || || |||||||
Sbjct: 509 acgaacggcgccttggcccagtccgtcttctccagcccgccgcgcgtcgccc 458



to top

>ref|XM_480875.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 906

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                       
Query: 375 ccccggtaggaggcgacgaagggcgccttggaccagtccgtcttctcccgccctccccga 434
           ||||||||| |||||| |||||| ||||  ||||||||||||||| ||| ||| ||| | 
Sbjct: 704 ccccggtagtaggcgaagaagggtgcctccgaccagtccgtcttcaccctcccgccctgc 645

                  
Query: 435 gtcgccc 441
           |||||||
Sbjct: 644 gtcgccc 638



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                           
Query: 375     ccccggtaggaggcgacgaagggcgccttggaccagtccgtcttctcccgccctccccga 434
               ||||||||| |||||| |||||| ||||  ||||||||||||||| ||| ||| ||| | 
Sbjct: 8378429 ccccggtagtaggcgaagaagggtgcctccgaccagtccgtcttcaccctcccgccctgc 8378488

                      
Query: 435     gtcgccc 441
               |||||||
Sbjct: 8378489 gtcgccc 8378495



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 396     ggcgccttggaccagtccgtcttctcccgccctccc 431
               |||||||  |||||||| |||||| |||||||||||
Sbjct: 8483219 ggcgcctgcgaccagtcagtcttcacccgccctccc 8483184



to top

>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0682A06
          Length = 142023

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                          
Query: 375    ccccggtaggaggcgacgaagggcgccttggaccagtccgtcttctcccgccctccccga 434
              ||||||||| |||||| |||||| ||||  ||||||||||||||| ||| ||| ||| | 
Sbjct: 118538 ccccggtagtaggcgaagaagggtgcctccgaccagtccgtcttcaccctcccgccctgc 118597

                     
Query: 435    gtcgccc 441
              |||||||
Sbjct: 118598 gtcgccc 118604



to top

>gb|AY105365.1| Zea mays PCO092487 mRNA sequence
          Length = 1253

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 378 cggtaggaggcgacgaagggcgccttggaccagtc 412
           ||||| || ||||||||||||||||||||||||||
Sbjct: 751 cggtacgacgcgacgaagggcgccttggaccagtc 717



to top

>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete
           cds
          Length = 1827

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 378 cggtaggaggcgacgaagggcgccttggaccagtc 412
           ||||| || ||||||||||||||||||||||||||
Sbjct: 766 cggtacgacgcgacgaagggcgccttggaccagtc 732



to top

>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete
           cds
          Length = 1221

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 378 cggtaggaggcgacgaagggcgccttggaccagtc 412
           ||||| || ||||||||||||||||||||||||||
Sbjct: 758 cggtacgacgcgacgaagggcgccttggaccagtc 724



to top

>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1
           gene), cultivated variety W64A
          Length = 1225

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 373 agccccggtaggaggcgacgaagggcgccttggaccagtcc 413
           |||||||||||||| |||||||||||||   ||||||||||
Sbjct: 748 agccccggtaggagacgacgaagggcgcggcggaccagtcc 708



to top

>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence
          Length = 807

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 355 cgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccg 414
           ||||| ||||| ||| |||| | ||| |||||||||||||||| ||||||  ||||||||
Sbjct: 655 cgcaggcgtcggcgttgaagtcgcggaaggaggcgacgaagggggccttgctccagtccg 596



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                            
Query: 355      cgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccg 414
                ||||| ||||| ||| |||| | ||| |||||||||||||||| ||||||  ||||||||
Sbjct: 28750471 cgcaggcgtcggcgttgaagtcgcggaaggaggcgacgaagggggccttgctccagtccg 28750412



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 386      ggcgacgaagggcgccttggaccagtccgtctt 418
                ||||||||| || ||||||| ||||||||||||
Sbjct: 13232771 ggcgacgaaaggggccttggtccagtccgtctt 13232739



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                            
Query: 355      cgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccg 414
                ||||| ||||| || ||||||| |||||||||||   ||||||||| |  | ||||||||
Sbjct: 28773287 cgcaggcgtcggcgcggaagccgcggtaggaggccgagaagggcgcgtgcgtccagtccg 28773346

                    
Query: 415      tctt 418
                ||||
Sbjct: 28773347 tctt 28773350



to top

>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0028E05
          Length = 157631

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                         
Query: 355   cgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccg 414
             ||||| ||||| ||| |||| | ||| |||||||||||||||| ||||||  ||||||||
Sbjct: 58246 cgcaggcgtcggcgttgaagtcgcggaaggaggcgacgaagggggccttgctccagtccg 58187



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                         
Query: 355   cgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccg 414
             ||||| ||||| || ||||||| |||||||||||   ||||||||| |  | ||||||||
Sbjct: 81062 cgcaggcgtcggcgcggaagccgcggtaggaggccgagaagggcgcgtgcgtccagtccg 81121

                 
Query: 415   tctt 418
             ||||
Sbjct: 81122 tctt 81125



to top

>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0622F03
          Length = 170064

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                          
Query: 355    cgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccg 414
              ||||| ||||| ||| |||| | ||| |||||||||||||||| ||||||  ||||||||
Sbjct: 151037 cgcaggcgtcggcgttgaagtcgcggaaggaggcgacgaagggggccttgctccagtccg 150978



to top

>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full
           insert sequence
          Length = 1208

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 355 cgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccg 414
           ||||| ||||| ||| |||| | ||| |||||||||||||||| ||||||  ||||||||
Sbjct: 763 cgcaggcgtcggcgttgaagtcgcggaaggaggcgacgaagggggccttgctccagtccg 704



to top

>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full
           insert sequence
          Length = 1208

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 355 cgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccg 414
           ||||| ||||| ||| |||| | ||| |||||||||||||||| ||||||  ||||||||
Sbjct: 763 cgcaggcgtcggcgttgaagtcgcggaaggaggcgacgaagggggccttgctccagtccg 704



to top

>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence
          Length = 1156

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 378 cggtaggaggcgacgaagggcgccttggaccagtc 412
           ||||||||| |||||||||||||  ||||||||||
Sbjct: 599 cggtaggagacgacgaagggcgcgctggaccagtc 565



to top

>gb|AY106744.1| Zea mays PCO111647 mRNA sequence
          Length = 1267

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 378 cggtaggaggcgacgaagggcgccttggaccagtc 412
           ||||||||| ||||||||||||| | |||||||||
Sbjct: 739 cggtaggagacgacgaagggcgcgtcggaccagtc 705



to top

>gb|AY105107.1| Zea mays PCO140468 mRNA sequence
          Length = 1297

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 378 cggtaggaggcgacgaagggcgccttggaccagtc 412
           ||||||||| |||||||||||||  ||||||||||
Sbjct: 763 cggtaggagacgacgaagggcgcgctggaccagtc 729



to top

>ref|NM_121390.3| Arabidopsis thaliana EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4);
            hydrolase, acting on glycosyl bonds / hydrolase,
            hydrolyzing O-glycosyl compounds AT5G13870 (EXGT-A4)
            mRNA, complete cds
          Length = 1386

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 208  cgcggtctgtgcagtagttgtagatggtgt 237
            ||||||| ||||| ||||||||||||||||
Sbjct: 1229 cgcggtcagtgcaatagttgtagatggtgt 1200



to top

>gb|AY043238.1| Vitis vinifera xyloglucan endotransglycosylase XET2 mRNA, partial
           cds
          Length = 478

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 399 gccttggaccagtccgtcttctcccgccctcccc 432
           |||||||||||||| ||||||||| |||| ||||
Sbjct: 309 gccttggaccagtcggtcttctccagcccacccc 276



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                            
Query: 353      ctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtc 412
                ||||||| |||||| || || |||  |||||  ||||||||| |||||||||  ||||||
Sbjct: 10359969 ctcgcagacgtcgaggtcgatgccgtggtagttggcgacgaacggcgccttgctccagtc 10359910

                      
Query: 413      cgtctt 418
                ||||||
Sbjct: 10359909 cgtctt 10359904



to top

>emb|BX830569.1|CNS0A1EU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB90ZE02 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1347

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 208  cgcggtctgtgcagtagttgtagatggtgt 237
            ||||||| ||||| ||||||||||||||||
Sbjct: 1229 cgcggtcagtgcaatagttgtagatggtgt 1200



to top

>emb|BX831074.1|CNS0A0QQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS55ZF02 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1362

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 208  cgcggtctgtgcagtagttgtagatggtgt 237
            ||||||| ||||| ||||||||||||||||
Sbjct: 1220 cgcggtcagtgcaatagttgtagatggtgt 1191



to top

>dbj|AK176228.1| Arabidopsis thaliana mRNA for endoxyloglucan transferase, complete
           cds, clone: RAFL23-11-K19
          Length = 1028

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 208 cgcggtctgtgcagtagttgtagatggtgt 237
           ||||||| ||||| ||||||||||||||||
Sbjct: 852 cgcggtcagtgcaatagttgtagatggtgt 823



to top

>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0669G10
          Length = 133372

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 353  ctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtc 412
            ||||||| |||||| || || |||  |||||  ||||||||| |||||||||  ||||||
Sbjct: 2391 ctcgcagacgtcgaggtcgatgccgtggtagttggcgacgaacggcgccttgctccagtc 2332

                  
Query: 413  cgtctt 418
            ||||||
Sbjct: 2331 cgtctt 2326



to top

>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0444A09
          Length = 125900

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                          
Query: 353    ctcgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtc 412
              ||||||| |||||| || || |||  |||||  ||||||||| |||||||||  ||||||
Sbjct: 125779 ctcgcagacgtcgaggtcgatgccgtggtagttggcgacgaacggcgccttgctccagtc 125720

                    
Query: 413    cgtctt 418
              ||||||
Sbjct: 125719 cgtctt 125714



to top

>dbj|AB005230.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAC12
          Length = 74613

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 208   cgcggtctgtgcagtagttgtagatggtgt 237
             ||||||| ||||| ||||||||||||||||
Sbjct: 25611 cgcggtcagtgcaatagttgtagatggtgt 25640



to top

>gb|AF163822.1|AF163822 Arabidopsis thaliana endoxyloglucan transferase (EXGT-A4) gene,
            complete cds
          Length = 2645

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 208  cgcggtctgtgcagtagttgtagatggtgt 237
            ||||||| ||||| ||||||||||||||||
Sbjct: 2377 cgcggtcagtgcaatagttgtagatggtgt 2348



to top

>dbj|AB086395.1| Vigna angularis VaXTH1 gene for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1913

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 216  gtgcagtagttgtagatggtgt 237
            ||||||||||||||||||||||
Sbjct: 1607 gtgcagtagttgtagatggtgt 1586



to top

>dbj|D16458.1|VIREXT5 V.angularis mRNA for endo-xyloglucan transferase, complete cds
          Length = 1319

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 216 gtgcagtagttgtagatggtgt 237
           ||||||||||||||||||||||
Sbjct: 996 gtgcagtagttgtagatggtgt 975



to top

>dbj|D16455.1|SOYEXT2 Soybean mRNA for endo-xyloglucan transferase, partial cds
          Length = 975

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 216 gtgcagtagttgtagatggtgt 237
           ||||||||||||||||||||||
Sbjct: 829 gtgcagtagttgtagatggtgt 808



to top

>dbj|AB026486.1| Arabidopsis thaliana EXGT-A4 mRNA for endoxyloglucan transferase,
           complete cds
          Length = 1050

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 208 cgcggtctgtgcagtagttgtagatggtgt 237
           ||||||| ||||| ||||||||||||||||
Sbjct: 872 cgcggtcagtgcaatagttgtagatggtgt 843



to top

>gb|AY841854.1| Vigna radiata xyloglucan endotransglucosylase/hydrolase precursor
           (XTH1) mRNA, complete cds
          Length = 1112

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 216 gtgcagtagttgtagatggtg 236
           |||||||||||||||||||||
Sbjct: 809 gtgcagtagttgtagatggtg 789



to top

>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein
          Length = 1187

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 382 aggaggcgacgaagggcgccttggaccagtccgtctt 418
           |||| |||||||||||||| |  ||||||||||||||
Sbjct: 760 aggacgcgacgaagggcgcgtgtgaccagtccgtctt 724



to top

>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
           (XEB)
          Length = 1226

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 382 aggaggcgacgaagggcgccttggaccagtccgtctt 418
           ||||||||||||| |||||||||  |||||| |||||
Sbjct: 740 aggaggcgacgaacggcgccttgctccagtcggtctt 704



to top

>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12
          Length = 349346

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 310    agcgggcgccctgggtggcgc 330
              |||||||||||||||||||||
Sbjct: 311269 agcgggcgccctgggtggcgc 311249



to top

>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13,
             complete sequence
          Length = 127135

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 405   gaccagtccgtcttctcccgccctccccgagtcgccc 441
             ||||||||||||||| ||||||| ||| | |||||||
Sbjct: 76510 gaccagtccgtcttcacccgcccgccctgcgtcgccc 76474



to top

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 263     gcggtactgcgcggcgtccaggtcc 287
               ||||| |||||||||||||||||||
Sbjct: 2666683 gcggttctgcgcggcgtccaggtcc 2666707



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 405      gaccagtccgtcttctcccgccctccccgagtcgccc 441
                ||||||||||||||| ||||||| ||| | |||||||
Sbjct: 32180821 gaccagtccgtcttcacccgcccgccctgcgtcgccc 32180785



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 387      gcgacgaagggcgccttggaccagtccgtctt 418
                |||||||| |||||||  ||||||||||||||
Sbjct: 30516565 gcgacgaacggcgcctgcgaccagtccgtctt 30516596



to top

>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1181

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 212  gtctgtgcagtagttgtagat 232
            |||||||||||||||||||||
Sbjct: 1065 gtctgtgcagtagttgtagat 1045



to top

>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA,
           complete cds
          Length = 1056

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 382 aggaggcgacgaagggcgccttggaccagtccgtctt 418
           ||||||||||||| |||||||||  |||||| |||||
Sbjct: 634 aggaggcgacgaacggcgccttgctccagtcggtctt 598



to top

>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0012F14
          Length = 168629

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 386    ggcgacgaagggcgccttggaccagtccgtctt 418
              ||||||||| || ||||||| ||||||||||||
Sbjct: 149959 ggcgacgaaaggggccttggtccagtccgtctt 149927



to top

>dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P08, full
           insert sequence
          Length = 1199

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 405 gaccagtccgtcttctcccgccctccccgagtcgccc 441
           ||||||||||||||| ||||||| ||| | |||||||
Sbjct: 732 gaccagtccgtcttcacccgcccgccctgcgtcgccc 696



to top

>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full
           insert sequence
          Length = 1439

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 386 ggcgacgaagggcgccttggaccagtccgtctt 418
           ||||||||| || ||||||| ||||||||||||
Sbjct: 987 ggcgacgaaaggggccttggtccagtccgtctt 955



to top

>dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C07, full
           insert sequence
          Length = 1279

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 405 gaccagtccgtcttctcccgccctccccgagtcgccc 441
           ||||||||||||||| ||||||| ||| | |||||||
Sbjct: 736 gaccagtccgtcttcacccgcccgccctgcgtcgccc 700



to top

>gb|AY107002.1| Zea mays PCO111646 mRNA sequence
          Length = 776

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 373 agccccggtaggaggcgacgaagggcgccttggaccagtcc 413
           ||||||| |||||| |||||||||||||   ||||||||||
Sbjct: 775 agccccgttaggagacgacgaagggcgcggcggaccagtcc 735



to top

>gb|AY103775.1| Zea mays PCO076979 mRNA sequence
          Length = 1495

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 378 cggtaggaggcgacgaagggcgccttggaccagtccgtctt 418
           ||||||||||||  |||||| || | |||||||||||||||
Sbjct: 787 cggtaggaggcggagaagggggcgtgggaccagtccgtctt 747



to top

>dbj|AB086396.1| Vigna angularis VaXTH2 gene for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1712

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 216  gtgcagtagttgtagatggtg 236
            |||||||||||||||||||||
Sbjct: 1446 gtgcagtagttgtagatggtg 1426



to top

>ref|XM_480898.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 861

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 396 ggcgccttggaccagtccgtcttctcccgccctccc 431
           |||||||  |||||||| |||||| |||||||||||
Sbjct: 641 ggcgcctgcgaccagtcagtcttcacccgccctccc 606



to top

>ref|XM_527961.1| PREDICTED: Pan troglodytes similar to Sonic hedgehog protein
            precursor (SHH) (LOC472586), mRNA
          Length = 3822

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 331  acaacttggcctccgccgac 350
            ||||||||||||||||||||
Sbjct: 1322 acaacttggcctccgccgac 1341



to top

>ref|XM_473788.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 822

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 387 gcgacgaagggcgccttggaccagtccgtctt 418
           |||||||| |||||||  ||||||||||||||
Sbjct: 635 gcgacgaacggcgcctgcgaccagtccgtctt 604



to top

>ref|XM_362730.1| Magnaporthe grisea 70-15 hypothetical protein (MG08318.4) partial
           mRNA
          Length = 816

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 266 gtactgcgcggcgtccaggtcctggaactcgg 297
           |||| |||| |||||||||||| |||||||||
Sbjct: 366 gtacagcgccgcgtccaggtccaggaactcgg 335



to top

>gb|AC140216.3| Mus musculus BAC clone RP23-276B20 from chromosome 5, complete
            sequence
          Length = 194560

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   cacgcatgagcatacagaca 35
            ||||||||||||||||||||
Sbjct: 9765 cacgcatgagcatacagaca 9784



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 343      ccgccgacgcctcgcagccgtcgacgtg 370
                |||||| ||||||||||||| |||||||
Sbjct: 12643798 ccgccgccgcctcgcagccggcgacgtg 12643771



to top

>gb|AC078834.5| Homo sapiens BAC clone RP11-69O3 from 7, complete sequence
          Length = 154737

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    acaacttggcctccgccgac 350
              ||||||||||||||||||||
Sbjct: 100604 acaacttggcctccgccgac 100585



to top

>gb|AY422195.1| Homo sapiens sonic hedgehog homolog (Drosophila) (SHH) gene, complete
            cds
          Length = 13414

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 331  acaacttggcctccgccgac 350
            ||||||||||||||||||||
Sbjct: 5477 acaacttggcctccgccgac 5496



to top

>gb|DQ439862.1| Capsicum annuum xyloglucan endotransglucosylase XET3 mRNA, complete
           cds
          Length = 1088

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 403 tggaccagtccgtcttctcccgccctcc 430
           ||||||||||||||||| ||| ||||||
Sbjct: 676 tggaccagtccgtcttcacccaccctcc 649



to top

>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02,
              complete sequence
          Length = 166804

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 387    gcgacgaagggcgccttggaccagtccgtctt 418
              |||||||| |||||||  ||||||||||||||
Sbjct: 149942 gcgacgaacggcgcctgcgaccagtccgtctt 149973



to top

>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0030D15, from chromosome 3, complete sequence
          Length = 151972

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 343   ccgccgacgcctcgcagccgtcgacgtg 370
             |||||| ||||||||||||| |||||||
Sbjct: 33191 ccgccgccgcctcgcagccggcgacgtg 33218



to top

>dbj|AK140479.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:B930008M23 product:Similar to
           dynein heavy chain at 16F homolog [Homo sapiens], full
           insert sequence
          Length = 4389

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 tgtgctccttcctgacccag 254
           ||||||||||||||||||||
Sbjct: 90  tgtgctccttcctgacccag 71



to top

>gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosylase mRNA, complete cds
          Length = 1162

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 387 gcgacgaagggcgccttggaccagtccgtctt 418
           |||||||| |||||||  ||||||||||||||
Sbjct: 707 gcgacgaacggcgcctgcgaccagtccgtctt 676



to top

>gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold
          Length = 501879

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     tacagacacgtagggataca 47
              ||||||||||||||||||||
Sbjct: 498467 tacagacacgtagggataca 498448



to top

>gb|AC161058.2| Mus musculus BAC clone RP23-205J6 from chromosome 5, complete sequence
          Length = 222180

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    cacgcatgagcatacagaca 35
             ||||||||||||||||||||
Sbjct: 82293 cacgcatgagcatacagaca 82274



to top

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 341     ctccgccgacgcctcgcagc 360
               ||||||||||||||||||||
Sbjct: 5286618 ctccgccgacgcctcgcagc 5286637



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 343      ccgccgacgcctcgcagccgtcgacgtg 370
                |||||| ||||||||||||| |||||||
Sbjct: 12640561 ccgccgccgcctcgcagccggcgacgtg 12640534



to top

>gb|AC147335.2| Pan troglodytes BAC clone RP43-4C1 from chromosome 7, complete sequence
          Length = 186272

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 331   acaacttggcctccgccgac 350
             ||||||||||||||||||||
Sbjct: 22172 acaacttggcctccgccgac 22191



to top

>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1217_D10
          Length = 103188

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 396   ggcgccttggaccagtccgtcttctcccgccctccc 431
             |||||||  |||||||| |||||| |||||||||||
Sbjct: 98936 ggcgcctgcgaccagtcagtcttcacccgccctccc 98901



to top

>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0031C02
          Length = 138843

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 396   ggcgccttggaccagtccgtcttctcccgccctccc 431
             |||||||  |||||||| |||||| |||||||||||
Sbjct: 12762 ggcgcctgcgaccagtcagtcttcacccgccctccc 12727



to top

>dbj|AK110771.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-A12, full
           insert sequence
          Length = 852

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 343 ccgccgacgcctcgcagccgtcgacgtg 370
           |||||| ||||||||||||| |||||||
Sbjct: 328 ccgccgccgcctcgcagccggcgacgtg 355



to top

>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full
           insert sequence
          Length = 1253

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                       
Query: 355 cgcagccgtcgacgtggaagccccggtaggaggcgacgaagggcgccttggaccagtccg 414
           ||||| ||||| || ||||||| |||||||||||   ||||||||| |  | ||||||||
Sbjct: 770 cgcaggcgtcggcgcggaagccgcggtaggaggccgagaagggcgcgtgcgtccagtccg 711

               
Query: 415 tctt 418
           ||||
Sbjct: 710 tctt 707



to top

>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full
           insert sequence
          Length = 1109

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 387 gcgacgaagggcgccttggaccagtccgtctt 418
           |||||||| |||||||  ||||||||||||||
Sbjct: 725 gcgacgaacggcgcctgcgaccagtccgtctt 694



to top

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 271     gcgcggcgtccaggtcctgg 290
               ||||||||||||||||||||
Sbjct: 4628592 gcgcggcgtccaggtcctgg 4628573



to top

>gb|AC122201.4| Mus musculus BAC clone RP23-64I9 from 6, complete sequence
          Length = 239994

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    tgtgctccttcctgacccag 254
              ||||||||||||||||||||
Sbjct: 195584 tgtgctccttcctgacccag 195565



to top

>gb|AC002484.1|AC002484 Human cosmid clone LL157A05 from 7q36, complete sequence
          Length = 48469

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   acaacttggcctccgccgac 350
             ||||||||||||||||||||
Sbjct: 14988 acaacttggcctccgccgac 14969


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,180,659
Number of Sequences: 3902068
Number of extensions: 3180659
Number of successful extensions: 52464
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51912
Number of HSP's gapped (non-prelim): 549
length of query: 441
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 419
effective length of database: 17,147,199,772
effective search space: 7184676704468
effective search space used: 7184676704468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top