ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast56g12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY082963.1| Hordeum vulgare clone HV_CEb0009E08f CONSTANS-lik... 656 0.0
2gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 46 0.075
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.075
4emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 46 0.075
5gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare str... 46 0.075
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.075
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.075
8dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.075
9dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.075
10dbj|AK109630.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.075
11ref|XM_480077.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.30
12ref|XM_465703.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.30
13ref|XM_473803.1| Oryza sativa (japonica cultivar-group), predic... 44 0.30
14emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4,... 44 0.30
15emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4,... 44 0.30
16dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.30
17dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.30
18gb|AC066694.7| Homo sapiens BAC clone RP11-655A7 from 2, complet... 44 0.30
19dbj|AP004998.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.30
20dbj|AP005526.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.30
21dbj|AP004302.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.30
22emb|BX649097.1|HSM809248 Homo sapiens mRNA; cDNA DKFZp686M0856 (... 44 0.30
23dbj|AK105836.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.30
24dbj|AK073495.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.30
25gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 44 0.30
26ref|NM_187516.1| Oryza sativa (japonica cultivar-group), predic... 42 1.2
27ref|XM_467170.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.2
28gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.2
29gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosom... 42 1.2
30gb|AY574278.1| Ralstonia sp. SJ98 putative aldehyde dehydrogenas... 42 1.2
31emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.2
32emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 42 1.2
33gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.2
34gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
35gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.2
36dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
37dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
38dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
39dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
40dbj|AP005745.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
41dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
42dbj|AK109149.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
43dbj|AK107208.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
44gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 1.2
45gb|L27208.1|RICRCC3 Oryza sativa root-specific RCc3 mRNA, comple... 42 1.2
46gb|BC088739.1| Mus musculus RIKEN cDNA D630040G17 gene, mRNA (cD... 40 4.6
47ref|XM_549965.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.6
48ref|XM_467559.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.6
49ref|XM_464184.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.6
50ref|XM_506721.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 4.6
51ref|XM_463770.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.6
52ref|XM_450526.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.6
53gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 4.6
54ref|XM_469487.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.6
55ref|XM_477166.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.6
56gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome... 40 4.6
57gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 4.6
58gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete seq... 40 4.6
59ref|XM_984040.1| PREDICTED: Mus musculus RIKEN cDNA D630040G17 g... 40 4.6
60ref|XM_906348.2| PREDICTED: Mus musculus RIKEN cDNA D630040G17 g... 40 4.6
61ref|XM_891788.2| PREDICTED: Mus musculus similar to zinc finger ... 40 4.6
62gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.6
63ref|XM_753894.1| Ustilago maydis 521 hypothetical protein (UM028... 40 4.6
64ref|XM_803126.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 4.6
65emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 4.6
66gb|BC057076.1| Mus musculus RIKEN cDNA D630040G17 gene, mRNA (cD... 40 4.6
67gb|BC041776.1| Mus musculus RIKEN cDNA D630040G17 gene, mRNA (cD... 40 4.6
68gb|AC133216.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.6
69emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete ... 40 4.6
70gb|AC113617.5| Homo sapiens BAC clone RP11-610B19 from 4, comple... 40 4.6
71gb|AC101790.5| Mus musculus chromosome 8, clone RP24-163M14, com... 40 4.6
72dbj|AK033589.1| Mus musculus adult male cecum cDNA, RIKEN full-l... 40 4.6
73dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
74dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
75dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
76dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
77dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
78dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
79dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 4.6
80dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 4.6
81dbj|AP003046.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
82dbj|AP005686.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
83dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
84dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
85dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
86dbj|AP005593.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
87dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
88gb|AE005124.1| Halobacterium sp. NRC-1 section 155 of 170 of the... 40 4.6
89gb|AE005007.1| Halobacterium sp. NRC-1 section 38 of 170 of the ... 40 4.6
90dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
91dbj|AK119771.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.6
92dbj|AK110224.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.6
93dbj|AK103602.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.6
94dbj|AK101516.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.6
95dbj|AK070615.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.6
96dbj|AK068481.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.6
97dbj|AK065631.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.6
98dbj|AK062483.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.6
99gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 4.6
100gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 4.6
101gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.6
102dbj|AP006851.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
103gb|M95794.1|BOVEF1APSI Bovine psi transcription factor EF1(A) ge... 40 4.6
104dbj|AB042262.1| Corynebacterium aquaticum lvr gene for levodione... 40 4.6 
>gb|AY082963.1| Hordeum vulgare clone HV_CEb0009E08f CONSTANS-like protein CO7
           (CO7) mRNA, partial cds
          Length = 1056

 Score =  656 bits (331), Expect = 0.0
 Identities = 343/346 (99%), Gaps = 1/346 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtcagctagaactatctgcattattctattctagttctagcgaaacatgcgtgcgcgca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985 agtcagctagaactatctgcattattctattctagttctagcgaaacatgcgtgcgcgca 926

                                                                       
Query: 61  tgcatgtcgagcagtatactccactccagccagcgatcagccagctcgaaaaacattaca 120
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 tgcatgtc-agcagtatactccactccagccagcgatcagccagctcgaaaaacattaca 867

                                                                       
Query: 121 tgcaattatacaagagggaacacgacgcatgcacgtcggcgcgctcgtgccggccatgcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 tgcaattatacaagagggaacacgacgcatgcacgtcggcgcgctcgtgccggccatgcc 807

                                                                       
Query: 181 gcgccgggttaattaggcacgcagccggcacgttcgccggaggaagcaggacacgaagtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 gcgccgggttaattaggcacgcagccggcacgttcgccggaggaagcaggacacgaagtt 747

                                                                       
Query: 241 aggcgccgcctcagaaggtgggcaccacgccgtagccgctgaagtcgagcacgcagggac 300
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 aggcgccncctcagaaggtgggcaccacgccgtagccgctgaagtcgagcacgcagggac 687

                                                         
Query: 301 gcggcgcggtgatcgtggccgctgcgacggcgtcggcgtcggcgtc 346
           ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 686 gcggcgcggtgatcgtgcccgctgcgacggcgtcggcgtcggcgtc 641
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 324     gcgacggcgtcggcgtcggcgtc 346
               |||||||||||||||||||||||
Sbjct: 1683566 gcgacggcgtcggcgtcggcgtc 1683588
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 321     gctgcgacggcgtcggcgtcggcgtct 347
               |||||| ||||||||||||||||||||
Sbjct: 1437649 gctgcggcggcgtcggcgtcggcgtct 1437623



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 324     gcgacggcgtcggcgtcggcg 344
               |||||||||||||||||||||
Sbjct: 8568838 gcgacggcgtcggcgtcggcg 8568858



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 321      gctgcgacggcgtcggcgtcggcg 344
                |||||| |||||||||||||||||
Sbjct: 28271617 gctgcgtcggcgtcggcgtcggcg 28271640
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 324     gcgacggcgtcggcgtcggcgtc 346
               |||||||||||||||||||||||
Sbjct: 2658907 gcgacggcgtcggcgtcggcgtc 2658929
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>gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11,
             from chromosome 3, complete sequence
          Length = 147806

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 321   gctgcgacggcgtcggcgtcggcgtct 347
             |||||| ||||||||||||||||||||
Sbjct: 99152 gctgcggcggcgtcggcgtcggcgtct 99126
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 321     gctgcgacggcgtcggcgtcggcgtct 347
               |||||| ||||||||||||||||||||
Sbjct: 1437647 gctgcggcggcgtcggcgtcggcgtct 1437621



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 324     gcgacggcgtcggcgtcggcg 344
               |||||||||||||||||||||
Sbjct: 8566673 gcgacggcgtcggcgtcggcg 8566693



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 321      gctgcgacggcgtcggcgtcggcg 344
                |||||| |||||||||||||||||
Sbjct: 28362941 gctgcgtcggcgtcggcgtcggcg 28362964
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                      
Query: 253     agaaggtgggcaccacgccgtagccgctgaagtcgagca 291
               ||||||| ||||| ||||||||||||  |||||||||||
Sbjct: 4316579 agaaggtaggcacgacgccgtagccggcgaagtcgagca 4316541



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 325      cgacggcgtcggcgtcggcgtc 346
                ||||||||||||||||||||||
Sbjct: 16850255 cgacggcgtcggcgtcggcgtc 16850276



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 325      cgacggcgtcggcgtcggcgt 345
                |||||||||||||||||||||
Sbjct: 26823720 cgacggcgtcggcgtcggcgt 26823700



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 323      tgcgacggcgtcggcgtcggcgtc 346
                |||| |||||||||||||||||||
Sbjct: 35728061 tgcgtcggcgtcggcgtcggcgtc 35728038



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 321      gctgcgacggcgtcggcgtcggcg 344
                |||||| |||||||||||||||||
Sbjct: 30162929 gctgcgtcggcgtcggcgtcggcg 30162952



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 328     cggcgtcggcgtcggcgtct 347
               ||||||||||||||||||||
Sbjct: 3266643 cggcgtcggcgtcggcgtct 3266662



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   gcgacggcgtcggcgtcggc 343
             ||||||||||||||||||||
Sbjct: 33681 gcgacggcgtcggcgtcggc 33662
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>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           PAC clone:P0544B02
          Length = 156339

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 253 agaaggtgggcaccacgccgtagccgctgaagtcgagca 291
           ||||||| ||||| ||||||||||||  |||||||||||
Sbjct: 143 agaaggtaggcacgacgccgtagccggcgaagtcgagca 105
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>dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0504A05
          Length = 148360

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                     
Query: 253    agaaggtgggcaccacgccgtagccgctgaagtcgagca 291
              ||||||| ||||| ||||||||||||  |||||||||||
Sbjct: 133393 agaaggtaggcacgacgccgtagccggcgaagtcgagca 133355
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>dbj|AK109630.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-D02, full
           insert sequence
          Length = 1370

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 253 agaaggtgggcaccacgccgtagccgctgaagtcgagca 291
           ||||||| ||||| ||||||||||||  |||||||||||
Sbjct: 996 agaaggtaggcacgacgccgtagccggcgaagtcgagca 958
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>ref|XM_480077.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 288

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 324 gcgacggcgtcggcgtcggcgt 345
           ||||||||||||||||||||||
Sbjct: 147 gcgacggcgtcggcgtcggcgt 168
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>ref|XM_465703.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1404

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 325 cgacggcgtcggcgtcggcgtc 346
           ||||||||||||||||||||||
Sbjct: 351 cgacggcgtcggcgtcggcgtc 372
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>ref|XM_473803.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1401

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 325 cgacggcgtcggcgtcggcgtc 346
           ||||||||||||||||||||||
Sbjct: 345 cgacggcgtcggcgtcggcgtc 366
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>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08,
              complete sequence
          Length = 129037

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 325    cgacggcgtcggcgtcggcgtc 346
              ||||||||||||||||||||||
Sbjct: 119744 cgacggcgtcggcgtcggcgtc 119723
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>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09,
             complete sequence
          Length = 152732

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 325   cgacggcgtcggcgtcggcgtc 346
             ||||||||||||||||||||||
Sbjct: 47767 cgacggcgtcggcgtcggcgtc 47746
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 325      cgacggcgtcggcgtcggcgtc 346
                ||||||||||||||||||||||
Sbjct: 30644036 cgacggcgtcggcgtcggcgtc 30644015



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 327      acggcgtcggcgtcggcgtc 346
                ||||||||||||||||||||
Sbjct: 21353342 acggcgtcggcgtcggcgtc 21353323
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 324     gcgacggcgtcggcgtcggcgt 345
               ||||||||||||||||||||||
Sbjct: 2602790 gcgacggcgtcggcgtcggcgt 2602811
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>gb|AC066694.7| Homo sapiens BAC clone RP11-655A7 from 2, complete sequence
          Length = 120381

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 108   gaaaaacattacatgcaattat 129
             ||||||||||||||||||||||
Sbjct: 80345 gaaaaacattacatgcaattat 80324
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>dbj|AP004998.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0036H07
          Length = 149797

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 325   cgacggcgtcggcgtcggcgtc 346
             ||||||||||||||||||||||
Sbjct: 51312 cgacggcgtcggcgtcggcgtc 51333
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>dbj|AP005526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0571B09
          Length = 147382

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 324    gcgacggcgtcggcgtcggcgt 345
              ||||||||||||||||||||||
Sbjct: 117147 gcgacggcgtcggcgtcggcgt 117168
to top
>dbj|AP004302.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1122_H01
          Length = 103030

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 325   cgacggcgtcggcgtcggcgtc 346
             ||||||||||||||||||||||
Sbjct: 98497 cgacggcgtcggcgtcggcgtc 98518
to top
>emb|BX649097.1|HSM809248 Homo sapiens mRNA; cDNA DKFZp686M0856 (from clone DKFZp686M0856)
          Length = 4386

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 108 gaaaaacattacatgcaattat 129
           ||||||||||||||||||||||
Sbjct: 997 gaaaaacattacatgcaattat 976
to top
>dbj|AK105836.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E12, full
           insert sequence
          Length = 1511

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 325 cgacggcgtcggcgtcggcgtc 346
           ||||||||||||||||||||||
Sbjct: 355 cgacggcgtcggcgtcggcgtc 376
to top
>dbj|AK073495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044F12, full
           insert sequence
          Length = 1526

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 325 cgacggcgtcggcgtcggcgtc 346
           ||||||||||||||||||||||
Sbjct: 370 cgacggcgtcggcgtcggcgtc 391
to top
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 154    cgtcggcgcgctcgtgccggcc 175
              ||||||||||||||||||||||
Sbjct: 546854 cgtcggcgcgctcgtgccggcc 546875
to top
>ref|NM_187516.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3903

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 324 gcgacggcgtcggcgtcggcg 344
           |||||||||||||||||||||
Sbjct: 46  gcgacggcgtcggcgtcggcg 26
to top
>ref|XM_467170.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 833

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 325 cgacggcgtcggcgtcggcgt 345
           |||||||||||||||||||||
Sbjct: 240 cgacggcgtcggcgtcggcgt 220
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 155     gtcggcgcgctcgtgccggcc 175
               |||||||||||||||||||||
Sbjct: 1282407 gtcggcgcgctcgtgccggcc 1282387
to top
>gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosome 18, complete
             sequence
          Length = 193184

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 47    catgcgtgcgcgcatgcatgt 67
             |||||||||||||||||||||
Sbjct: 79020 catgcgtgcgcgcatgcatgt 79000
to top
>gb|AY574278.1| Ralstonia sp. SJ98 putative aldehyde dehydrogenase, maleylacetate
            reductase (pnpD), benzenetriol dioxygenase (pnpC),
            putative 4-nitrocatechol monooxygenase ferridoxin
            component protein, conserved hypothetical protein,
            putative regulatory protein, and putative ATP binding ABC
            transporter genes, complete cds
          Length = 6897

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 326  gacggcgtcggcgtcggcgtc 346
            |||||||||||||||||||||
Sbjct: 4953 gacggcgtcggcgtcggcgtc 4973
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 155     gtcggcgcgctcgtgccggcc 175
               |||||||||||||||||||||
Sbjct: 2599758 gtcggcgcgctcgtgccggcc 2599738
to top
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 302    cggcgcggtgatcgtggccgctgcgacgg 330
              |||||||||||||||||| || |||||||
Sbjct: 341781 cggcgcggtgatcgtggcagccgcgacgg 341753
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 326    gacggcgtcggcgtcggcgtc 346
              |||||||||||||||||||||
Sbjct: 626362 gacggcgtcggcgtcggcgtc 626342



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 317    ggccgctgcgacggcgtcggcgtc 340
              |||||| |||||||||||||||||
Sbjct: 985557 ggccgccgcgacggcgtcggcgtc 985580
to top
>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02,
             complete sequence
          Length = 137327

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 324   gcgacggcgtcggcgtcggcg 344
             |||||||||||||||||||||
Sbjct: 49810 gcgacggcgtcggcgtcggcg 49830
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 155    gtcggcgcgctcgtgccggcc 175
              |||||||||||||||||||||
Sbjct: 160372 gtcggcgcgctcgtgccggcc 160392
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 318     gccgctgcgacggcgtcggcgtcggcgtc 346
               ||||||||| |||||||||||||| ||||
Sbjct: 2878055 gccgctgcgtcggcgtcggcgtcgtcgtc 2878027



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 324      gcgacggcgtcggcgtcggc 343
                ||||||||||||||||||||
Sbjct: 15699068 gcgacggcgtcggcgtcggc 15699049



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 327     acggcgtcggcgtcggcgtc 346
               ||||||||||||||||||||
Sbjct: 9458983 acggcgtcggcgtcggcgtc 9459002
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 322      ctgcgacggcgtcggcgtcggcgtc 346
                ||||| |||||||||||||||||||
Sbjct: 28453206 ctgcgccggcgtcggcgtcggcgtc 28453182



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 324     gcgacggcgtcggcgtcggc 343
               ||||||||||||||||||||
Sbjct: 4240568 gcgacggcgtcggcgtcggc 4240587
to top
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0532H03
          Length = 166128

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 322   ctgcgacggcgtcggcgtcggcgtc 346
             ||||| |||||||||||||||||||
Sbjct: 60239 ctgcgccggcgtcggcgtcggcgtc 60215
to top
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1001_D02
          Length = 129081

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 325  cgacggcgtcggcgtcggcgt 345
            |||||||||||||||||||||
Sbjct: 2263 cgacggcgtcggcgtcggcgt 2243
to top
>dbj|AP005745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0017O03
          Length = 180651

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 318   gccgctgcgacggcgtcggcgtcggcgtc 346
             ||||||||| |||||||||||||| ||||
Sbjct: 69047 gccgctgcgtcggcgtcggcgtcgtcgtc 69019
to top
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0516F12
          Length = 146364

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 325   cgacggcgtcggcgtcggcgt 345
             |||||||||||||||||||||
Sbjct: 89773 cgacggcgtcggcgtcggcgt 89753
to top
>dbj|AK109149.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-F07, full
           insert sequence
          Length = 833

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 325 cgacggcgtcggcgtcggcgt 345
           |||||||||||||||||||||
Sbjct: 240 cgacggcgtcggcgtcggcgt 220
to top
>dbj|AK107208.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-B11, full
           insert sequence
          Length = 2043

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 322 ctgcgacggcgtcggcgtcggcgtc 346
           ||||| |||||||||||||||||||
Sbjct: 270 ctgcgccggcgtcggcgtcggcgtc 294
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 326     gacggcgtcggcgtcggcgtc 346
               |||||||||||||||||||||
Sbjct: 3215319 gacggcgtcggcgtcggcgtc 3215299



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 322    ctgcgacggcgtcggcgtcggcgtc 346
              ||||| |||||||||||||||||||
Sbjct: 785738 ctgcgccggcgtcggcgtcggcgtc 785762
to top
>gb|L27208.1|RICRCC3 Oryza sativa root-specific RCc3 mRNA, complete cds
          Length = 715

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 325 cgacggcgtcggcgtcggcgt 345
           |||||||||||||||||||||
Sbjct: 165 cgacggcgtcggcgtcggcgt 145
to top
>gb|BC088739.1| Mus musculus RIKEN cDNA D630040G17 gene, mRNA (cDNA clone
            IMAGE:30468634), partial cds
          Length = 5254

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   catgcgtgcgcgcatgcatg 66
            ||||||||||||||||||||
Sbjct: 2813 catgcgtgcgcgcatgcatg 2794
to top
>ref|XM_549965.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 918

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 323 tgcgacggcgtcggcgtcggcgtc 346
           ||||| ||||||||||||||||||
Sbjct: 270 tgcgaaggcgtcggcgtcggcgtc 293
to top
>ref|XM_467559.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1933

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 321 gctgcgacggcgtcggcgtcggcg 344
           |||||| |||||||||||||||||
Sbjct: 179 gctgcgtcggcgtcggcgtcggcg 202
to top
>ref|XM_464184.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1754

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 328 cggcgtcggcgtcggcgtct 347
           ||||||||||||||||||||
Sbjct: 546 cggcgtcggcgtcggcgtct 565
to top
>ref|XM_506721.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ9003_G05.6 mRNA
          Length = 2040

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 328 cggcgtcggcgtcggcgtct 347
           ||||||||||||||||||||
Sbjct: 547 cggcgtcggcgtcggcgtct 566
to top
>ref|XM_463770.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 935

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 324 gcgacggcgtcggcgtcggc 343
           ||||||||||||||||||||
Sbjct: 650 gcgacggcgtcggcgtcggc 631
to top
>ref|XM_450526.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1281

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 acggcgtcggcgtcggcgtc 346
           ||||||||||||||||||||
Sbjct: 770 acggcgtcggcgtcggcgtc 751
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 327     acggcgtcggcgtcggcgtc 346
               ||||||||||||||||||||
Sbjct: 3293196 acggcgtcggcgtcggcgtc 3293215
to top
>ref|XM_469487.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 900

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 gctgcgacggcgtcggcgtcggcg 344
           |||||| |||||||||||||||||
Sbjct: 286 gctgcgtcggcgtcggcgtcggcg 263
to top
>ref|XM_477166.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2114

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 317 ggccgctgcgacggcgtcggcgtcggcg 344
           |||||| |||||||||||||||| ||||
Sbjct: 76  ggccgcggcgacggcgtcggcgttggcg 49
to top
>gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0018H01
              map R1538, complete sequence
          Length = 142712

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 321    gctgcgacggcgtcggcgtcggcg 344
              |||||| |||||||||||||||||
Sbjct: 141425 gctgcgtcggcgtcggcgtcggcg 141402
to top
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 326     gacggcgtcggcgtcggcgtcttc 349
               |||||| |||||||||||||||||
Sbjct: 1404644 gacggcttcggcgtcggcgtcttc 1404621
to top
>gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete sequence
          Length = 138518

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 328    cggcgtcggcgtcggcgtct 347
              ||||||||||||||||||||
Sbjct: 115873 cggcgtcggcgtcggcgtct 115854
to top
>ref|XM_984040.1| PREDICTED: Mus musculus RIKEN cDNA D630040G17 gene (D630040G17Rik),
            mRNA
          Length = 7706

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   catgcgtgcgcgcatgcatg 66
            ||||||||||||||||||||
Sbjct: 5281 catgcgtgcgcgcatgcatg 5262
to top
>ref|XM_906348.2| PREDICTED: Mus musculus RIKEN cDNA D630040G17 gene, transcript
            variant 1 (D630040G17Rik), mRNA
          Length = 7611

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   catgcgtgcgcgcatgcatg 66
            ||||||||||||||||||||
Sbjct: 5186 catgcgtgcgcgcatgcatg 5167
to top
>ref|XM_891788.2| PREDICTED: Mus musculus similar to zinc finger protein 64
            (predicted), transcript variant 1 (LOC622675), mRNA
          Length = 7937

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   catgcgtgcgcgcatgcatg 66
            ||||||||||||||||||||
Sbjct: 5512 catgcgtgcgcgcatgcatg 5493
to top
>gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0682E05,
              complete sequence
          Length = 162223

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    acggcgtcggcgtcggcgtc 346
              ||||||||||||||||||||
Sbjct: 129140 acggcgtcggcgtcggcgtc 129159
to top
>ref|XM_753894.1| Ustilago maydis 521 hypothetical protein (UM02840.1) partial mRNA
          Length = 1524

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 328  cggcgtcggcgtcggcgtct 347
            ||||||||||||||||||||
Sbjct: 1447 cggcgtcggcgtcggcgtct 1428
to top
>ref|XM_803126.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053507827.10) partial mRNA
          Length = 10383

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 323  tgcgacggcgtcggcgtcggcgtc 346
            |||| |||||||||||||||||||
Sbjct: 8609 tgcgtcggcgtcggcgtcggcgtc 8586
to top
>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10,
            complete sequence
          Length = 144811

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  acggcgtcggcgtcggcgtc 346
            ||||||||||||||||||||
Sbjct: 3092 acggcgtcggcgtcggcgtc 3073
to top
>gb|BC057076.1| Mus musculus RIKEN cDNA D630040G17 gene, mRNA (cDNA clone
            IMAGE:5697783), partial cds
          Length = 3731

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   catgcgtgcgcgcatgcatg 66
            ||||||||||||||||||||
Sbjct: 1284 catgcgtgcgcgcatgcatg 1265
to top
>gb|BC041776.1| Mus musculus RIKEN cDNA D630040G17 gene, mRNA (cDNA clone
            IMAGE:4239743), partial cds
          Length = 4512

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   catgcgtgcgcgcatgcatg 66
            ||||||||||||||||||||
Sbjct: 2652 catgcgtgcgcgcatgcatg 2633
to top
>gb|AC133216.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
            OSJNBb0049B20, complete sequence
          Length = 131337

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 325  cgacggcgtcggcgtcggcg 344
            ||||||||||||||||||||
Sbjct: 7986 cgacggcgtcggcgtcggcg 8005
to top
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29
          Length = 283100

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    cgtcggcgcgctcgtgccgg 173
              ||||||||||||||||||||
Sbjct: 167469 cgtcggcgcgctcgtgccgg 167488
to top
>gb|AC113617.5| Homo sapiens BAC clone RP11-610B19 from 4, complete sequence
          Length = 152306

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    tatctgcattattctattct 33
             ||||||||||||||||||||
Sbjct: 85897 tatctgcattattctattct 85878
to top
>gb|AC101790.5| Mus musculus chromosome 8, clone RP24-163M14, complete sequence
          Length = 202651

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     catgcgtgcgcgcatgcatg 66
              ||||||||||||||||||||
Sbjct: 150069 catgcgtgcgcgcatgcatg 150088
to top
>dbj|AK033589.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched
            library, clone:9130017F21 product:unclassifiable, full
            insert sequence
          Length = 2962

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   catgcgtgcgcgcatgcatg 66
            ||||||||||||||||||||
Sbjct: 1038 catgcgtgcgcgcatgcatg 1019
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 325      cgacggcgtcggcgtcggcg 344
                ||||||||||||||||||||
Sbjct: 26954698 cgacggcgtcggcgtcggcg 26954717



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 327      acggcgtcggcgtcggcgtc 346
                ||||||||||||||||||||
Sbjct: 25639093 acggcgtcggcgtcggcgtc 25639112
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 317     ggccgctgcgacggcgtcggcgtcggcg 344
               |||||| |||||||||||||||| ||||
Sbjct: 7233988 ggccgcggcgacggcgtcggcgttggcg 7234015
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 323     tgcgacggcgtcggcgtcggcgtc 346
               ||||| ||||||||||||||||||
Sbjct: 1263625 tgcgaaggcgtcggcgtcggcgtc 1263648
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>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0554A06
          Length = 165311

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   gcgacggcgtcggcgtcggc 343
             ||||||||||||||||||||
Sbjct: 85789 gcgacggcgtcggcgtcggc 85808
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>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0685G12
          Length = 149155

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 321    gctgcgacggcgtcggcgtcggcg 344
              |||||| |||||||||||||||||
Sbjct: 142526 gctgcgtcggcgtcggcgtcggcg 142549
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>dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1124_G07
          Length = 93240

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 321   gctgcgacggcgtcggcgtcggcg 344
             |||||| |||||||||||||||||
Sbjct: 35633 gctgcgtcggcgtcggcgtcggcg 35656
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 157     cggcgcgctcgtgccggcca 176
               ||||||||||||||||||||
Sbjct: 2205663 cggcgcgctcgtgccggcca 2205682
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 165     tcgtgccggccatgccgcgc 184
               ||||||||||||||||||||
Sbjct: 4041297 tcgtgccggccatgccgcgc 4041316
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>dbj|AP003046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0445D12
          Length = 140952

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 323   tgcgacggcgtcggcgtcggcgtc 346
             ||||| ||||||||||||||||||
Sbjct: 57279 tgcgaaggcgtcggcgtcggcgtc 57302
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>dbj|AP005686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0016E03
          Length = 152934

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   gcgacggcgtcggcgtcggc 343
             ||||||||||||||||||||
Sbjct: 90375 gcgacggcgtcggcgtcggc 90356
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>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1103G11
          Length = 182931

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 328    cggcgtcggcgtcggcgtct 347
              ||||||||||||||||||||
Sbjct: 138830 cggcgtcggcgtcggcgtct 138849
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>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0016A21
          Length = 144076

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 317   ggccgctgcgacggcgtcggcgtcggcg 344
             |||||| |||||||||||||||| ||||
Sbjct: 74472 ggccgcggcgacggcgtcggcgttggcg 74499
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>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ9003_G05
          Length = 141860

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 328   cggcgtcggcgtcggcgtct 347
             ||||||||||||||||||||
Sbjct: 15503 cggcgtcggcgtcggcgtct 15522
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>dbj|AP005593.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0692F07
          Length = 141544

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   acggcgtcggcgtcggcgtc 346
             ||||||||||||||||||||
Sbjct: 22619 acggcgtcggcgtcggcgtc 22638
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>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1124_D06
          Length = 102239

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 323   tgcgacggcgtcggcgtcggcgtc 346
             |||| |||||||||||||||||||
Sbjct: 88675 tgcgtcggcgtcggcgtcggcgtc 88652
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>gb|AE005124.1| Halobacterium sp. NRC-1 section 155 of 170 of the complete genome
          Length = 12016

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 325  cgacggcgtcggcgtcggcg 344
            ||||||||||||||||||||
Sbjct: 8351 cgacggcgtcggcgtcggcg 8332
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>gb|AE005007.1| Halobacterium sp. NRC-1 section 38 of 170 of the complete genome
          Length = 10293

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 321  gctgcgacggcgtcggcgtcggcg 344
            |||||| |||||||||||||||||
Sbjct: 6361 gctgcgccggcgtcggcgtcggcg 6338
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>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1370C05
          Length = 148271

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   gcgacggcgtcggcgtcggc 343
             ||||||||||||||||||||
Sbjct: 28290 gcgacggcgtcggcgtcggc 28271
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>dbj|AK119771.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-F02, full
           insert sequence
          Length = 1754

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 328 cggcgtcggcgtcggcgtct 347
           ||||||||||||||||||||
Sbjct: 546 cggcgtcggcgtcggcgtct 565
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>dbj|AK110224.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-E05, full
           insert sequence
          Length = 3184

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 324 gcgacggcgtcggcgtcggc 343
           ||||||||||||||||||||
Sbjct: 688 gcgacggcgtcggcgtcggc 669
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>dbj|AK103602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133G01, full
           insert sequence
          Length = 1932

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 321 gctgcgacggcgtcggcgtcggcg 344
           |||||| |||||||||||||||||
Sbjct: 178 gctgcgtcggcgtcggcgtcggcg 201
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>dbj|AK101516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046G03, full
           insert sequence
          Length = 4213

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 acggcgtcggcgtcggcgtc 346
           ||||||||||||||||||||
Sbjct: 490 acggcgtcggcgtcggcgtc 471
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>dbj|AK070615.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063D11, full
           insert sequence
          Length = 2040

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 328 cggcgtcggcgtcggcgtct 347
           ||||||||||||||||||||
Sbjct: 547 cggcgtcggcgtcggcgtct 566
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>dbj|AK068481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152M13, full
           insert sequence
          Length = 1799

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 acggcgtcggcgtcggcgtc 346
           ||||||||||||||||||||
Sbjct: 389 acggcgtcggcgtcggcgtc 370
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>dbj|AK065631.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029M23, full
            insert sequence
          Length = 2349

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 325  cgacggcgtcggcgtcggcg 344
            ||||||||||||||||||||
Sbjct: 1280 cgacggcgtcggcgtcggcg 1299
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>dbj|AK062483.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-G07, full
           insert sequence
          Length = 935

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 324 gcgacggcgtcggcgtcggc 343
           ||||||||||||||||||||
Sbjct: 650 gcgacggcgtcggcgtcggc 631
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 268     cgccgtagccgctgaagtcg 287
               ||||||||||||||||||||
Sbjct: 5992574 cgccgtagccgctgaagtcg 5992555
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 296     gggacgcggcgcggtgatcg 315
               ||||||||||||||||||||
Sbjct: 3049472 gggacgcggcgcggtgatcg 3049453



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 324     gcgacggcgtcggcgtcggc 343
               ||||||||||||||||||||
Sbjct: 1543648 gcgacggcgtcggcgtcggc 1543667
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 325      cgacggcgtcggcgtcggcg 344
                ||||||||||||||||||||
Sbjct: 27281751 cgacggcgtcggcgtcggcg 27281770



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 327      acggcgtcggcgtcggcgtc 346
                ||||||||||||||||||||
Sbjct: 25957763 acggcgtcggcgtcggcgtc 25957782
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>dbj|AP006851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
             fosmid clone:OSJNOa183H18
          Length = 38313

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   gcgacggcgtcggcgtcggc 343
             ||||||||||||||||||||
Sbjct: 33681 gcgacggcgtcggcgtcggc 33662
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>gb|M95794.1|BOVEF1APSI Bovine psi transcription factor EF1(A) gene, complete cds
          Length = 2102

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 7    ctagaactatctgcattatt 26
            ||||||||||||||||||||
Sbjct: 1534 ctagaactatctgcattatt 1553
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>dbj|AB042262.1| Corynebacterium aquaticum lvr gene for levodione reductase,
           complete cds
          Length = 2007

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 315 gtggccgctgcgacggcgtcggcgtcggcgtc 346
           ||||||||||   |||||||||||||||||||
Sbjct: 281 gtggccgctgttgcggcgtcggcgtcggcgtc 250


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,236,117
Number of Sequences: 3902068
Number of extensions: 2236117
Number of successful extensions: 56989
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53525
Number of HSP's gapped (non-prelim): 3457
length of query: 349
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 327
effective length of database: 17,147,199,772
effective search space: 5607134325444
effective search space used: 5607134325444
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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