>ref|XM_493742.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1404

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 142/175 (81%)
 Strand = Plus / Minus

                                                                        
Query: 245  tcagatccagtcagcaatcttgctctactctnnnnnnntcttggttgcgactgcaggcag 304
            |||||||||||||||  |||||||||| |||       ||||||||| || ||| || ||
Sbjct: 1202 tcagatccagtcagcgttcttgctctattctaagtaaatcttggttgtgattgcgggaag 1143

                                                                        
Query: 305  cttcctgccagatgcctcattcaattcataggtgatatccatatccataagacggtgatt 364
            || | ||||||||| ||||| ||||||||| ||||  ||||||||||| || || |||||
Sbjct: 1142 ctgcttgccagatgactcatgcaattcatatgtgaactccatatccatgagccgatgatt 1083

                                                                   
Query: 365  ctctttcgagcgaaccatcgagaacgaaacattgatactgtccccttcatttact 419
            |||||| ||||||||||| | ||| ||||| || | | |||||||||| ||||||
Sbjct: 1082 ctcttttgagcgaaccattgtgaaagaaactttaacattgtccccttcgtttact 1028

>dbj|AK103971.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C05, full
            insert sequence
          Length = 1420

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 142/175 (81%)
 Strand = Plus / Minus

                                                                        
Query: 245  tcagatccagtcagcaatcttgctctactctnnnnnnntcttggttgcgactgcaggcag 304
            |||||||||||||||  |||||||||| |||       ||||||||| || ||| || ||
Sbjct: 1198 tcagatccagtcagcgttcttgctctattctaagtaaatcttggttgtgattgcgggaag 1139

                                                                        
Query: 305  cttcctgccagatgcctcattcaattcataggtgatatccatatccataagacggtgatt 364
            || | ||||||||| ||||| ||||||||| ||||  ||||||||||| || || |||||
Sbjct: 1138 ctgcttgccagatgactcatgcaattcatatgtgaactccatatccatgagccgatgatt 1079

                                                                   
Query: 365  ctctttcgagcgaaccatcgagaacgaaacattgatactgtccccttcatttact 419
            |||||| ||||||||||| | ||| ||||| || | | |||||||||| ||||||
Sbjct: 1078 ctcttttgagcgaaccattgtgaaagaaactttaacattgtccccttcgtttact 1024

>dbj|AK073269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028C20, full
            insert sequence
          Length = 1404

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 142/175 (81%)
 Strand = Plus / Minus

                                                                        
Query: 245  tcagatccagtcagcaatcttgctctactctnnnnnnntcttggttgcgactgcaggcag 304
            |||||||||||||||  |||||||||| |||       ||||||||| || ||| || ||
Sbjct: 1202 tcagatccagtcagcgttcttgctctattctaagtaaatcttggttgtgattgcgggaag 1143

                                                                        
Query: 305  cttcctgccagatgcctcattcaattcataggtgatatccatatccataagacggtgatt 364
            || | ||||||||| ||||| ||||||||| ||||  ||||||||||| || || |||||
Sbjct: 1142 ctgcttgccagatgactcatgcaattcatatgtgaactccatatccatgagccgatgatt 1083

                                                                   
Query: 365  ctctttcgagcgaaccatcgagaacgaaacattgatactgtccccttcatttact 419
            |||||| ||||||||||| | ||| ||||| || | | |||||||||| ||||||
Sbjct: 1082 ctcttttgagcgaaccattgtgaaagaaactttaacattgtccccttcgtttact 1028

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 114/137 (83%)
 Strand = Plus / Minus

                                                                           
Query: 283     tcttggttgcgactgcaggcagcttcctgccagatgcctcattcaattcataggtgatat 342
               ||||||||| || ||| || |||| | ||||||||| ||||| ||||||||| ||||  |
Sbjct: 2249369 tcttggttgtgattgcgggaagctgcttgccagatgactcatgcaattcatatgtgaact 2249310

                                                                           
Query: 343     ccatatccataagacggtgattctctttcgagcgaaccatcgagaacgaaacattgatac 402
               |||||||||| || || ||||||||||| ||||||||||| | ||| ||||| || | | 
Sbjct: 2249309 ccatatccatgagccgatgattctcttttgagcgaaccattgtgaaagaaactttaacat 2249250

                                
Query: 403     tgtccccttcatttact 419
               |||||||||| ||||||
Sbjct: 2249249 tgtccccttcgtttact 2249233

>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              clone:P0535G04
          Length = 154180

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 114/137 (83%)
 Strand = Plus / Minus

                                                                          
Query: 283    tcttggttgcgactgcaggcagcttcctgccagatgcctcattcaattcataggtgatat 342
              ||||||||| || ||| || |||| | ||||||||| ||||| ||||||||| ||||  |
Sbjct: 108826 tcttggttgtgattgcgggaagctgcttgccagatgactcatgcaattcatatgtgaact 108767

                                                                          
Query: 343    ccatatccataagacggtgattctctttcgagcgaaccatcgagaacgaaacattgatac 402
              |||||||||| || || ||||||||||| ||||||||||| | ||| ||||| || | | 
Sbjct: 108766 ccatatccatgagccgatgattctcttttgagcgaaccattgtgaaagaaactttaacat 108707

                               
Query: 403    tgtccccttcatttact 419
              |||||||||| ||||||
Sbjct: 108706 tgtccccttcgtttact 108690

>gb|AY109451.1| Zea mays CL17271_1 mRNA sequence
          Length = 1019

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 94/112 (83%)
 Strand = Plus / Plus

                                                                       
Query: 283 tcttggttgcgactgcaggcagcttcctgccagatgcctcattcaattcataggtgatat 342
           ||||||||  |||||| ||  ||||||||||||||  ||| | ||||||||| ||||  |
Sbjct: 280 tcttggttttgactgctgggtgcttcctgccagataactcgtgcaattcatatgtgaact 339

                                                               
Query: 343 ccatatccataagacggtgattctctttcgagcgaaccatcgagaacgaaac 394
           ||||||||||||| || || || || |||||||||||||||||||| |||||
Sbjct: 340 ccatatccataagccgatggttttccttcgagcgaaccatcgagaaggaaac 391

>gb|AC110496.12| Mus musculus chromosome 7, clone RP23-56P3, complete sequence
          Length = 170784

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 21    aataataaattactgatacaacaaacaaaa 50
             |||||||||||| |||||||| ||||||||
Sbjct: 99417 aataataaattattgatacaaaaaacaaaa 99388

>gb|AC068759.11| Homo sapiens 3 BAC RP11-324C10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 183357

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 329   ttcataggtgatatccatatc 349
             |||||||||||||||||||||
Sbjct: 50854 ttcataggtgatatccatatc 50874

>gb|AC090961.2| Bos taurus clone RP42-552E5, complete sequence
          Length = 94444

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    aaatggcaataataaattac 33
             ||||||||||||||||||||
Sbjct: 39368 aaatggcaataataaattac 39387

>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     aaatggcaataataaattac 33
              ||||||||||||||||||||
Sbjct: 407168 aaatggcaataataaattac 407187

>gb|DP000044.2| Callithrix jacchus target 106 genomic scaffold
          Length = 574594

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     atagtatgtattacacaaag 118
              ||||||||||||||||||||
Sbjct: 407173 atagtatgtattacacaaag 407154

>emb|AL731533.8| Human DNA sequence from clone RP11-118K6 on chromosome 10 Contains a
             novel gene, the 5' end of the PFKP gene for
             phosphofructokinase platelet and a CpG island, complete
             sequence
          Length = 98398

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 13    gaaatggcaataataaattactgataca 40
             |||||||||| ||||||||||| |||||
Sbjct: 52773 gaaatggcaaaaataaattacttataca 52800

>emb|AL606923.8| Human DNA sequence from clone RP11-361F19 on chromosome 6 Contains a C2H2
              zinc finger protein pseudogene, complete sequence
          Length = 154285

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    ctgccagatgcctcattcaa 328
              ||||||||||||||||||||
Sbjct: 153427 ctgccagatgcctcattcaa 153446

>emb|AL391807.13| Human DNA sequence from clone RP3-525N10 on chromosome 6 Contains the
            5' end of the BAI3 gene for brain-specific angiogenesis
            inhibitor 3, a novel gene and a CpG island, complete
            sequence
          Length = 73228

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 309  ctgccagatgcctcattcaa 328
            ||||||||||||||||||||
Sbjct: 1142 ctgccagatgcctcattcaa 1161

>gb|AC112129.4| Homo sapiens 3 BAC RP11-25L9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163621

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     aatggcaataataaattact 34
              ||||||||||||||||||||
Sbjct: 133035 aatggcaataataaattact 133054

>emb|AL731619.3|OSJN00267 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084N21,
             complete sequence
          Length = 143093

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   ttgatgcggcagcacaatga 203
             ||||||||||||||||||||
Sbjct: 93828 ttgatgcggcagcacaatga 93809

>gb|AC121764.2| Homo sapiens chromosome 3 clone RP11-875H7, complete sequence
          Length = 201379

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 5     caaccaatgaaatggcaataataaatta 32
             ||||||||||| ||||||||| ||||||
Sbjct: 76379 caaccaatgaattggcaataagaaatta 76352

>gb|AC117401.3| Homo sapiens 3 BAC RP11-521J5 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 197360

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 15   aatggcaataataaattact 34
            ||||||||||||||||||||
Sbjct: 2895 aatggcaataataaattact 2914

>gb|AC109779.6| Homo sapiens 3 BAC RP11-16J16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 89162

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    atgaaatggcaataataaat 30
             ||||||||||||||||||||
Sbjct: 12689 atgaaatggcaataataaat 12708

>gb|AC010048.5| Drosophila melanogaster 3L BAC RP98-5B23 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 175316

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   aggttggccattaggccata 136
             ||||||||||||||||||||
Sbjct: 97107 aggttggccattaggccata 97126

>gb|AC090116.15| Homo sapiens 12q BAC RP11-578B16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 162004

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   catacaatgaaaaccaaaca 152
             ||||||||||||||||||||
Sbjct: 43063 catacaatgaaaaccaaaca 43082

>gb|DP000046.1| Aotus nancymaae target 106 genomic scaffold
          Length = 387541

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     atagtatgtattacacaaag 118
              ||||||||||||||||||||
Sbjct: 279087 atagtatgtattacacaaag 279068

>gb|DP000047.1| Saimiri boliviensis boliviensis target 106 genomic scaffold
          Length = 211360

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     atagtatgtattacacaaag 118
              ||||||||||||||||||||
Sbjct: 207210 atagtatgtattacacaaag 207191

>gb|AC091926.4| Homo sapiens chromosome 5 clone RP11-290G6, complete sequence
          Length = 209836

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      tcaaccaatgaaatggcaat 23
              ||||||||||||||||||||
Sbjct: 169423 tcaaccaatgaaatggcaat 169442

>gb|AF165124.1|AF165124 Homo sapiens chromosome 5q31.1-q33.1 clone BAC djn082c10 containing
              GABRG2 gene, complete sequence
          Length = 195909

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      tcaaccaatgaaatggcaat 23
              ||||||||||||||||||||
Sbjct: 105679 tcaaccaatgaaatggcaat 105698

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 184      ttgatgcggcagcacaatga 203
                ||||||||||||||||||||
Sbjct: 18877918 ttgatgcggcagcacaatga 18877899

>gb|AC141001.6| Homo sapiens X BAC RP11-1051N9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 49724

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 61    cagatcatgcctcatggtatcact 84
             ||||||||||||||||| ||||||
Sbjct: 16648 cagatcatgcctcatggcatcact 16671

>emb|BX666064.10| Zebrafish DNA sequence from clone DKEY-6N3 in linkage group 22,
             complete sequence
          Length = 156234

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    atgaaatggcaataataaat 30
             ||||||||||||||||||||
Sbjct: 58226 atgaaatggcaataataaat 58245

>gb|AE003535.3| Drosophila melanogaster chromosome 3L, section 50 of 83 of the complete
              sequence
          Length = 278708

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    aggttggccattaggccata 136
              ||||||||||||||||||||
Sbjct: 262001 aggttggccattaggccata 262020

>gb|AC140250.3| Mus musculus BAC clone RP24-288J3 from 1, complete sequence
          Length = 163490

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    tacaatgaaaaccaaacaca 154
              ||||||||||||||||||||
Sbjct: 117325 tacaatgaaaaccaaacaca 117306

>gb|AC140461.4| Mus musculus BAC clone RP23-11M24 from 1, complete sequence
          Length = 202209

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 135  tacaatgaaaaccaaacaca 154
            ||||||||||||||||||||
Sbjct: 1416 tacaatgaaaaccaaacaca 1397

>gb|AC153541.4| Mus musculus 10 BAC RP23-80P5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 222655

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 302    cagcttcctgccagatgcct 321
              ||||||||||||||||||||
Sbjct: 173987 cagcttcctgccagatgcct 173968


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,001,725
Number of Sequences: 3902068
Number of extensions: 4001725
Number of successful extensions: 72119
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72009
Number of HSP's gapped (non-prelim): 107
length of query: 430
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 408
effective length of database: 17,147,199,772
effective search space: 6996057506976
effective search space used: 6996057506976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)