ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbast55g10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108989.1| Zea mays PCO108745 mRNA sequence Length = 625 Score = 204 bits (103), Expect = 2e-49 Identities = 204/237 (86%), Gaps = 3/237 (1%) Strand = Plus / Plus Query: 173 ggtctcgtcgatgggcaccaccttgggcacgtcgacggggagcaggtggaggtcctgcat 232 |||||||||||||||| |||| ||||||||| || |||||||| ||||| ||| || | Sbjct: 295 ggtctcgtcgatgggcgacaccctgggcacgtggatggggagcacgtggacctccggcgt 354 Query: 233 ccacgggtt---ctcgccggcgtcgtcgacggtacgcagcgccctccagacggcgctgtt 289 ||||||||| ||| || | |||| || || || |||||| |||||||||||||||| Sbjct: 355 ccacgggttgccctcctcgctggcgtccaccgtgcggagcgccttccagacggcgctgtt 414 Query: 290 gcatttgaagcctgagccgaatgcgatctgccagacgcggtctcccttcttgatccggcg 349 ||| |||||||| |||||||| |||||||||||||||||||| |||||| ||| |||| Sbjct: 415 gcacttgaagccggagccgaaggcgatctgccagacgcggtcgcccttccggatgcggcc 474 Query: 350 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaa 406 ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 475 cttggcctcgcagtaggcgagctcgtaccagagcgagctgctggaggtgttgccgaa 531
>ref|NM_196495.1| Oryza sativa (japonica cultivar-group) putative beta-ketoacyl-CoA synthase (OSJNBa0032I20.8), mRNA Length = 1572 Score = 163 bits (82), Expect = 6e-37 Identities = 145/166 (87%) Strand = Plus / Minus Query: 253 cgtcgacggtacgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatg 312 |||||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| | Sbjct: 1459 cgtcgacggtgcgcagcgccctccacacggcgctgttgcacttgaacccggagccgaagg 1400 Query: 313 cgatctgccagacgcggtctcccttcttgatccggcgcttggcctcgcagtatgcgagct 372 |||||||||| || ||||| || |||||||| | ||||||||||||||| ||||||| Sbjct: 1399 cgatctgccacacccggtcgccgcgcttgatcctccccttggcctcgcagtaggcgagct 1340 Query: 373 cgtaccagagggagctgctggaggtgttgccgaacctgtagagcgt 418 ||||||| || ||||||||||| ||||||||||| | ||||||||| Sbjct: 1339 cgtaccacagcgagctgctggacgtgttgccgaagcggtagagcgt 1294 Score = 99.6 bits (50), Expect = 7e-18 Identities = 80/90 (88%) Strand = Plus / Minus Query: 165 tggtaagaggtctcgtcgatgggcaccaccttgggcacgtcgacggggagcaggtggagg 224 ||||| |||||||| ||||||||| ||||||||||||||||||||||||||| || | Sbjct: 1559 tggtaggaggtctcatcgatgggcgccaccttgggcacgtcgacggggagcatgtccacc 1500 Query: 225 tcctgcatccacgggttctcgccggcgtcg 254 |||| |||||||||||| |||||||||||| Sbjct: 1499 tccttcatccacgggttgtcgccggcgtcg 1470
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 163 bits (82), Expect = 6e-37 Identities = 145/166 (87%) Strand = Plus / Plus Query: 253 cgtcgacggtacgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatg 312 |||||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| | Sbjct: 14046760 cgtcgacggtgcgcagcgccctccacacggcgctgttgcacttgaacccggagccgaagg 14046819 Query: 313 cgatctgccagacgcggtctcccttcttgatccggcgcttggcctcgcagtatgcgagct 372 |||||||||| || ||||| || |||||||| | ||||||||||||||| ||||||| Sbjct: 14046820 cgatctgccacacccggtcgccgcgcttgatcctccccttggcctcgcagtaggcgagct 14046879 Query: 373 cgtaccagagggagctgctggaggtgttgccgaacctgtagagcgt 418 ||||||| || ||||||||||| ||||||||||| | ||||||||| Sbjct: 14046880 cgtaccacagcgagctgctggacgtgttgccgaagcggtagagcgt 14046925 Score = 99.6 bits (50), Expect = 7e-18 Identities = 80/90 (88%) Strand = Plus / Plus Query: 165 tggtaagaggtctcgtcgatgggcaccaccttgggcacgtcgacggggagcaggtggagg 224 ||||| |||||||| ||||||||| ||||||||||||||||||||||||||| || | Sbjct: 14046660 tggtaggaggtctcatcgatgggcgccaccttgggcacgtcgacggggagcatgtccacc 14046719 Query: 225 tcctgcatccacgggttctcgccggcgtcg 254 |||| |||||||||||| |||||||||||| Sbjct: 14046720 tccttcatccacgggttgtcgccggcgtcg 14046749 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 330 |||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| Sbjct: 11266872 ccagacggcgctgttgcacttgaagcctgagccgaagccgatctgccagacacggt 11266927 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 330 |||||||||||||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 3639004 ccagacggcgctgttgcacttgaagccggagccgaagccgatctgccagacgcggt 3639059 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 351 ttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacctg 410 ||||||||| ||| ||||||||||||||||| ||||||||| |||||| ||||||||| Sbjct: 3639080 ttggcctcggcgtaggcgagctcgtaccagagcgagctgctgctggtgttcccgaacctg 3639139 Query: 411 t 411 | Sbjct: 3639140 t 3639140
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 163 bits (82), Expect = 6e-37 Identities = 145/166 (87%) Strand = Plus / Plus Query: 253 cgtcgacggtacgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatg 312 |||||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| | Sbjct: 62889 cgtcgacggtgcgcagcgccctccacacggcgctgttgcacttgaacccggagccgaagg 62948 Query: 313 cgatctgccagacgcggtctcccttcttgatccggcgcttggcctcgcagtatgcgagct 372 |||||||||| || ||||| || |||||||| | ||||||||||||||| ||||||| Sbjct: 62949 cgatctgccacacccggtcgccgcgcttgatcctccccttggcctcgcagtaggcgagct 63008 Query: 373 cgtaccagagggagctgctggaggtgttgccgaacctgtagagcgt 418 ||||||| || ||||||||||| ||||||||||| | ||||||||| Sbjct: 63009 cgtaccacagcgagctgctggacgtgttgccgaagcggtagagcgt 63054 Score = 99.6 bits (50), Expect = 7e-18 Identities = 80/90 (88%) Strand = Plus / Plus Query: 165 tggtaagaggtctcgtcgatgggcaccaccttgggcacgtcgacggggagcaggtggagg 224 ||||| |||||||| ||||||||| ||||||||||||||||||||||||||| || | Sbjct: 62789 tggtaggaggtctcatcgatgggcgccaccttgggcacgtcgacggggagcatgtccacc 62848 Query: 225 tcctgcatccacgggttctcgccggcgtcg 254 |||| |||||||||||| |||||||||||| Sbjct: 62849 tccttcatccacgggttgtcgccggcgtcg 62878
>dbj|AK073016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149L14, full insert sequence Length = 1040 Score = 163 bits (82), Expect = 6e-37 Identities = 145/166 (87%) Strand = Plus / Minus Query: 253 cgtcgacggtacgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatg 312 |||||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| | Sbjct: 731 cgtcgacggtgcgcagcgccctccacacggcgctgttgcacttgaacccggagccgaagg 672 Query: 313 cgatctgccagacgcggtctcccttcttgatccggcgcttggcctcgcagtatgcgagct 372 |||||||||| || ||||| || |||||||| | ||||||||||||||| ||||||| Sbjct: 671 cgatctgccacacccggtcgccgcgcttgatcctccccttggcctcgcagtaggcgagct 612 Query: 373 cgtaccagagggagctgctggaggtgttgccgaacctgtagagcgt 418 ||||||| || ||||||||||| ||||||||||| | ||||||||| Sbjct: 611 cgtaccacagcgagctgctggacgtgttgccgaagcggtagagcgt 566 Score = 99.6 bits (50), Expect = 7e-18 Identities = 80/90 (88%) Strand = Plus / Minus Query: 165 tggtaagaggtctcgtcgatgggcaccaccttgggcacgtcgacggggagcaggtggagg 224 ||||| |||||||| ||||||||| ||||||||||||||||||||||||||| || | Sbjct: 831 tggtaggaggtctcatcgatgggcgccaccttgggcacgtcgacggggagcatgtccacc 772 Query: 225 tcctgcatccacgggttctcgccggcgtcg 254 |||| |||||||||||| |||||||||||| Sbjct: 771 tccttcatccacgggttgtcgccggcgtcg 742
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 163 bits (82), Expect = 6e-37 Identities = 145/166 (87%) Strand = Plus / Plus Query: 253 cgtcgacggtacgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatg 312 |||||||||| |||||||||||||| |||||||||||||| ||||| || |||||||| | Sbjct: 14055002 cgtcgacggtgcgcagcgccctccacacggcgctgttgcacttgaacccggagccgaagg 14055061 Query: 313 cgatctgccagacgcggtctcccttcttgatccggcgcttggcctcgcagtatgcgagct 372 |||||||||| || ||||| || |||||||| | ||||||||||||||| ||||||| Sbjct: 14055062 cgatctgccacacccggtcgccgcgcttgatcctccccttggcctcgcagtaggcgagct 14055121 Query: 373 cgtaccagagggagctgctggaggtgttgccgaacctgtagagcgt 418 ||||||| || ||||||||||| ||||||||||| | ||||||||| Sbjct: 14055122 cgtaccacagcgagctgctggacgtgttgccgaagcggtagagcgt 14055167 Score = 99.6 bits (50), Expect = 7e-18 Identities = 80/90 (88%) Strand = Plus / Plus Query: 165 tggtaagaggtctcgtcgatgggcaccaccttgggcacgtcgacggggagcaggtggagg 224 ||||| |||||||| ||||||||| ||||||||||||||||||||||||||| || | Sbjct: 14054902 tggtaggaggtctcatcgatgggcgccaccttgggcacgtcgacggggagcatgtccacc 14054961 Query: 225 tcctgcatccacgggttctcgccggcgtcg 254 |||| |||||||||||| |||||||||||| Sbjct: 14054962 tccttcatccacgggttgtcgccggcgtcg 14054991 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 330 |||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| Sbjct: 11273312 ccagacggcgctgttgcacttgaagcctgagccgaagccgatctgccagacacggt 11273367 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 330 |||||||||||||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 3638925 ccagacggcgctgttgcacttgaagccggagccgaagccgatctgccagacgcggt 3638980 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 351 ttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacctg 410 ||||||||| ||| ||||||||||||||||| ||||||||| |||||| ||||||||| Sbjct: 3639001 ttggcctcggcgtaggcgagctcgtaccagagcgagctgctgctggtgttcccgaacctg 3639060 Query: 411 t 411 | Sbjct: 3639061 t 3639061
>ref|XM_475915.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1563 Score = 129 bits (65), Expect = 8e-27 Identities = 125/145 (86%) Strand = Plus / Minus Query: 267 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 326 ||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 1463 agcgccctccacacggcgctgttgcacttgaagccggagccgaaggcgatctgccacgtc 1404 Query: 327 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 386 | ||| |||||||||||||| | |||||||||| ||| |||||||||||||| || ||| Sbjct: 1403 ctgtcccccttcttgatccgccccttggcctcggcgtaggcgagctcgtaccacagcgag 1344 Query: 387 ctgctggaggtgttgccgaacctgt 411 ||||| || ||||| |||||||||| Sbjct: 1343 ctgctcgacgtgttcccgaacctgt 1319
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 129 bits (65), Expect = 8e-27 Identities = 125/145 (86%) Strand = Plus / Plus Query: 267 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 326 ||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 40133 agcgccctccacacggcgctgttgcacttgaagccggagccgaaggcgatctgccacgtc 40192 Query: 327 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 386 | ||| |||||||||||||| | |||||||||| ||| |||||||||||||| || ||| Sbjct: 40193 ctgtcccccttcttgatccgccccttggcctcggcgtaggcgagctcgtaccacagcgag 40252 Query: 387 ctgctggaggtgttgccgaacctgt 411 ||||| || ||||| |||||||||| Sbjct: 40253 ctgctcgacgtgttcccgaacctgt 40277
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 129 bits (65), Expect = 8e-27 Identities = 125/145 (86%) Strand = Plus / Plus Query: 267 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 326 ||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 28405209 agcgccctccacacggcgctgttgcacttgaagccggagccgaaggcgatctgccacgtc 28405268 Query: 327 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 386 | ||| |||||||||||||| | |||||||||| ||| |||||||||||||| || ||| Sbjct: 28405269 ctgtcccccttcttgatccgccccttggcctcggcgtaggcgagctcgtaccacagcgag 28405328 Query: 387 ctgctggaggtgttgccgaacctgt 411 ||||| || ||||| |||||||||| Sbjct: 28405329 ctgctcgacgtgttcccgaacctgt 28405353 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcc 334 |||||||||||||||||| ||||| || |||||| ||||||||||||| ||||| || Sbjct: 28059211 ccagacggcgctgttgcacttgaacccgctgccgaacgcgatctgccagatgcggtggcc 28059270 Query: 335 cttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgga 394 || ||||| ||||||||| ||| |||||||||||||||| ||||||||| || Sbjct: 28059271 gcggcggacccggcccttggcctccatgtaggcgagctcgtaccagatggagctgctcga 28059330 Query: 395 ggtgttgccgaa 406 ||||||||||| Sbjct: 28059331 cgtgttgccgaa 28059342 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 330 |||| |||| |||||||| ||||||||||||||||| ||||||||||||| |||| Sbjct: 22008140 ccagtcggcactgttgcacttgaagcctgagccgaagccgatctgccagacacggt 22008195
>dbj|AK070754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067B12, full insert sequence Length = 2233 Score = 129 bits (65), Expect = 8e-27 Identities = 125/145 (86%) Strand = Plus / Minus Query: 267 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 326 ||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 1922 agcgccctccacacggcgctgttgcacttgaagccggagccgaaggcgatctgccacgtc 1863 Query: 327 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 386 | ||| |||||||||||||| | |||||||||| ||| |||||||||||||| || ||| Sbjct: 1862 ctgtcccccttcttgatccgccccttggcctcggcgtaggcgagctcgtaccacagcgag 1803 Query: 387 ctgctggaggtgttgccgaacctgt 411 ||||| || ||||| |||||||||| Sbjct: 1802 ctgctcgacgtgttcccgaacctgt 1778
>gb|AY110123.1| Zea mays CL29782_1 mRNA sequence Length = 932 Score = 125 bits (63), Expect = 1e-25 Identities = 112/130 (86%) Strand = Plus / Plus Query: 267 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 326 |||||| ||||||||||||||||||| |||||||| |||||||| ||||||||||| || Sbjct: 252 agcgccttccagacggcgctgttgcacttgaagccggagccgaaagcgatctgccatacc 311 Query: 327 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 386 |||| || |||||| | ||||||||||||||| ||||||||||||||||| ||| Sbjct: 312 cggtnnnnnttgcggatccgtcccttggcctcgcagtaggcgagctcgtaccagagcgag 371 Query: 387 ctgctggagg 396 |||||||||| Sbjct: 372 ctgctggagg 381 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 173 ggtctcgtcgatgggcaccaccttgggcacgtcgacggggagca 216 |||||| ||||||||| ||||||||||||| || |||||||| Sbjct: 155 ggtctcatcgatgggcgaaaccttgggcacgtggatggggagca 198
>ref|NM_187760.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1575 Score = 103 bits (52), Expect = 4e-19 Identities = 127/152 (83%) Strand = Plus / Minus Query: 267 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 326 |||||| ||||||||||||||||||| ||||| || |||||||| ||||||||||| || Sbjct: 1406 agcgccttccagacggcgctgttgcacttgaatccggagccgaacgcgatctgccacacc 1347 Query: 327 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 386 ||||| || | |||||| | || ||||||||||| | ||||||||||| || ||| Sbjct: 1346 cggtcgccgcgcctgatcctccctttcgcctcgcagtaggacagctcgtaccacagcgag 1287 Query: 387 ctgctggaggtgttgccgaacctgtagagcgt 418 ||||| || ||||| ||||||||||||||||| Sbjct: 1286 ctgctcgacgtgttcccgaacctgtagagcgt 1255 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 181 cgatgggcaccaccttgggcacgt 204 |||||||||||||||||||||||| Sbjct: 1501 cgatgggcaccaccttgggcacgt 1478
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 103 bits (52), Expect = 4e-19 Identities = 127/152 (83%) Strand = Plus / Minus Query: 267 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 326 |||||| ||||||||||||||||||| ||||| || |||||||| ||||||||||| || Sbjct: 3388440 agcgccttccagacggcgctgttgcacttgaatccggagccgaacgcgatctgccacacc 3388381 Query: 327 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 386 ||||| || | |||||| | || ||||||||||| | ||||||||||| || ||| Sbjct: 3388380 cggtcgccgcgcctgatcctccctttcgcctcgcagtaggacagctcgtaccacagcgag 3388321 Query: 387 ctgctggaggtgttgccgaacctgtagagcgt 418 ||||| || ||||| ||||||||||||||||| Sbjct: 3388320 ctgctcgacgtgttcccgaacctgtagagcgt 3388289 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcc 334 |||||| ||||||||||| ||||| || |||||||| |||||||||| ||||||| || Sbjct: 7656824 ccagaccgcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcggttgcc 7656883 Query: 335 cttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgga 394 || || |||| |||||||||| ||| || ||||||||||| || ||||||||| Sbjct: 7656884 gcgctggacgcggcccttggcctcggcgtacgccagctcgtaccacagcgagctgctgct 7656943 Query: 395 ggtgttgccgaacc 408 |||||||||||||| Sbjct: 7656944 ggtgttgccgaacc 7656957 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 350 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacc 408 |||||||||| ||| ||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 6271549 cttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaacc 6271607 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 274 tccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 331 ||||||||||||||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 6271473 tccagacggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtc 6271530 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 279 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 331 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||| Sbjct: 4253136 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 4253084 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 181 cgatgggcaccaccttgggcacgt 204 |||||||||||||||||||||||| Sbjct: 3388535 cgatgggcaccaccttgggcacgt 3388512
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 103 bits (52), Expect = 4e-19 Identities = 127/152 (83%) Strand = Plus / Plus Query: 267 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 326 |||||| ||||||||||||||||||| ||||| || |||||||| ||||||||||| || Sbjct: 40774 agcgccttccagacggcgctgttgcacttgaatccggagccgaacgcgatctgccacacc 40833 Query: 327 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 386 ||||| || | |||||| | || ||||||||||| | ||||||||||| || ||| Sbjct: 40834 cggtcgccgcgcctgatcctccctttcgcctcgcagtaggacagctcgtaccacagcgag 40893 Query: 387 ctgctggaggtgttgccgaacctgtagagcgt 418 ||||| || ||||| ||||||||||||||||| Sbjct: 40894 ctgctcgacgtgttcccgaacctgtagagcgt 40925 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 181 cgatgggcaccaccttgggcacgt 204 |||||||||||||||||||||||| Sbjct: 40679 cgatgggcaccaccttgggcacgt 40702
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 103 bits (52), Expect = 4e-19 Identities = 127/152 (83%) Strand = Plus / Minus Query: 267 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 326 |||||| ||||||||||||||||||| ||||| || |||||||| ||||||||||| || Sbjct: 3388551 agcgccttccagacggcgctgttgcacttgaatccggagccgaacgcgatctgccacacc 3388492 Query: 327 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 386 ||||| || | |||||| | || ||||||||||| | ||||||||||| || ||| Sbjct: 3388491 cggtcgccgcgcctgatcctccctttcgcctcgcagtaggacagctcgtaccacagcgag 3388432 Query: 387 ctgctggaggtgttgccgaacctgtagagcgt 418 ||||| || ||||| ||||||||||||||||| Sbjct: 3388431 ctgctcgacgtgttcccgaacctgtagagcgt 3388400 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcc 334 |||||| ||||||||||| ||||| || |||||||| |||||||||| ||||||| || Sbjct: 7654659 ccagaccgcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcggttgcc 7654718 Query: 335 cttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgga 394 || || |||| |||||||||| ||| || ||||||||||| || ||||||||| Sbjct: 7654719 gcgctggacgcggcccttggcctcggcgtacgccagctcgtaccacagcgagctgctgct 7654778 Query: 395 ggtgttgccgaacc 408 |||||||||||||| Sbjct: 7654779 ggtgttgccgaacc 7654792 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 350 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacc 408 |||||||||| ||| ||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 6270762 cttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaacc 6270820 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 274 tccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 331 ||||||||||||||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 6270686 tccagacggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtc 6270743 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 279 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 331 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||| Sbjct: 4253251 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 4253199 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 181 cgatgggcaccaccttgggcacgt 204 |||||||||||||||||||||||| Sbjct: 3388646 cgatgggcaccaccttgggcacgt 3388623
>dbj|AK064127.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E01, full insert sequence Length = 1408 Score = 103 bits (52), Expect = 4e-19 Identities = 127/152 (83%) Strand = Plus / Minus Query: 267 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 326 |||||| ||||||||||||||||||| ||||| || |||||||| ||||||||||| || Sbjct: 974 agcgccttccagacggcgctgttgcacttgaatccggagccgaacgcgatctgccacacc 915 Query: 327 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 386 ||||| || | |||||| | || ||||||||||| | ||||||||||| || ||| Sbjct: 914 cggtcgccgcgcctgatcctccctttcgcctcgcagtaggacagctcgtaccacagcgag 855 Query: 387 ctgctggaggtgttgccgaacctgtagagcgt 418 ||||| || ||||| ||||||||||||||||| Sbjct: 854 ctgctcgacgtgttcccgaacctgtagagcgt 823 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 181 cgatgggcaccaccttgggcacgt 204 |||||||||||||||||||||||| Sbjct: 1069 cgatgggcaccaccttgggcacgt 1046
>ref|XM_467628.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1458 Score = 101 bits (51), Expect = 2e-18 Identities = 117/139 (84%) Strand = Plus / Minus Query: 280 cggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcccttct 339 ||||||||||||| |||||||| |||||||| ||||| ||| |||||||| ||||| Sbjct: 1360 cggcgctgttgcacttgaagccggagccgaagccgatcatccacacgcggtcgcccttgc 1301 Query: 340 tgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgt 399 || |||| |||||||||| ||| ||||||||||||||||| |||||||| || |||| Sbjct: 1300 gcatgcggcccttggcctcgacgtaggcgagctcgtaccagagcgagctgctcgacgtgt 1241 Query: 400 tgccgaacctgtagagcgt 418 ||||||||| || |||||| Sbjct: 1240 tgccgaaccggtggagcgt 1222
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 101 bits (51), Expect = 2e-18 Identities = 117/139 (84%) Strand = Plus / Minus Query: 280 cggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcccttct 339 ||||||||||||| |||||||| |||||||| ||||| ||| |||||||| ||||| Sbjct: 30520192 cggcgctgttgcacttgaagccggagccgaagccgatcatccacacgcggtcgcccttgc 30520133 Query: 340 tgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgt 399 || |||| |||||||||| ||| ||||||||||||||||| |||||||| || |||| Sbjct: 30520132 gcatgcggcccttggcctcgacgtaggcgagctcgtaccagagcgagctgctcgacgtgt 30520073 Query: 400 tgccgaacctgtagagcgt 418 ||||||||| || |||||| Sbjct: 30520072 tgccgaaccggtggagcgt 30520054 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 267 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgcca 322 ||||||||||| || ||||||||||| ||||| || || ||||| ||||||||||| Sbjct: 5930662 agcgccctccacaccgcgctgttgcacttgaacccggacccgaacgcgatctgcca 5930717
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 101 bits (51), Expect = 2e-18 Identities = 117/139 (84%) Strand = Plus / Minus Query: 280 cggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcccttct 339 ||||||||||||| |||||||| |||||||| ||||| ||| |||||||| ||||| Sbjct: 32200 cggcgctgttgcacttgaagccggagccgaagccgatcatccacacgcggtcgcccttgc 32141 Query: 340 tgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgt 399 || |||| |||||||||| ||| ||||||||||||||||| |||||||| || |||| Sbjct: 32140 gcatgcggcccttggcctcgacgtaggcgagctcgtaccagagcgagctgctcgacgtgt 32081 Query: 400 tgccgaacctgtagagcgt 418 ||||||||| || |||||| Sbjct: 32080 tgccgaaccggtggagcgt 32062
>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0617A09 Length = 134804 Score = 101 bits (51), Expect = 2e-18 Identities = 117/139 (84%) Strand = Plus / Minus Query: 280 cggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcccttct 339 ||||||||||||| |||||||| |||||||| ||||| ||| |||||||| ||||| Sbjct: 126240 cggcgctgttgcacttgaagccggagccgaagccgatcatccacacgcggtcgcccttgc 126181 Query: 340 tgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgt 399 || |||| |||||||||| ||| ||||||||||||||||| |||||||| || |||| Sbjct: 126180 gcatgcggcccttggcctcgacgtaggcgagctcgtaccagagcgagctgctcgacgtgt 126121 Query: 400 tgccgaacctgtagagcgt 418 ||||||||| || |||||| Sbjct: 126120 tgccgaaccggtggagcgt 126102
>emb|AJ292770.1|ZMA292770 Zea mays mRNA for putative fatty acid longase (fae2 gene) Length = 2018 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Minus Query: 274 tccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctc 333 ||||||||||||||||||| ||||| || || || |||||||||||||||| | ||| | Sbjct: 1585 tccagacggcgctgttgcacttgaatccagaaccaaatgcgatctgccagatcctgtcgc 1526 Query: 334 ccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgg 393 |||| |||||| | ||| ||||| ||| || |||||||||||||| |||||||| | Sbjct: 1525 gcttcctgatcctaccctttgcctcagtgtacgccagctcgtaccagagtgagctgcttg 1466 Query: 394 aggtgttgccgaacctgta 412 | |||||||| |||||||| Sbjct: 1465 atgtgttgccaaacctgta 1447
>gb|AY109713.2| Zea mays CL1191_1 mRNA sequence Length = 1949 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Minus Query: 274 tccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctc 333 ||||||||||||||||||| ||||| || || || |||||||||||||||| | ||| | Sbjct: 1553 tccagacggcgctgttgcacttgaatccagaaccaaatgcgatctgccagatcctgtcgc 1494 Query: 334 ccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgg 393 |||| |||||| | ||| ||||| ||| || |||||||||||||| |||||||| | Sbjct: 1493 gcttcctgatcctaccctttgcctcagtgtacgccagctcgtaccagagtgagctgcttg 1434 Query: 394 aggtgttgccgaacctgta 412 | |||||||| |||||||| Sbjct: 1433 atgtgttgccaaacctgta 1415
>dbj|AP004939.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17M09, TM0105, complete sequence Length = 127990 Score = 85.7 bits (43), Expect = 1e-13 Identities = 118/143 (82%) Strand = Plus / Plus Query: 264 cgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccag 323 |||| |||| |||| ||||||||||| || ||||| || || || ||||||||||||||| Sbjct: 85478 cgcaccgccttccacacggcgctgttacacttgaaacccgacccaaatgcgatctgccag 85537 Query: 324 acgcggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagg 383 || ||||| || || || ||||| |||||| ||| ||| || ||||||||||||||| Sbjct: 85538 acccggtcccctttgccgacccggcccttggcttcggtgtaggcaagctcgtaccagagg 85597 Query: 384 gagctgctggaggtgttgccgaa 406 ||||| || || ||||||||||| Sbjct: 85598 gagctactagaagtgttgccgaa 85620
>ref|NM_194947.1| Oryza sativa (japonica cultivar-group) putative senescence-associated protein 15 (OSJNBa0036D19.6), mRNA Length = 1797 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 330 |||||||||||||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 1476 ccagacggcgctgttgcacttgaagccggagccgaagccgatctgccagacgcggt 1421 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 351 ttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacctg 410 ||||||||| ||| ||||||||||||||||| ||||||||| |||||| ||||||||| Sbjct: 1400 ttggcctcggcgtaggcgagctcgtaccagagcgagctgctgctggtgttcccgaacctg 1341 Query: 411 t 411 | Sbjct: 1340 t 1340
>ref|NM_196127.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OJ1341F06.20), mRNA Length = 609 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 330 |||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| Sbjct: 57 ccagacggcgctgttgcacttgaagcctgagccgaagccgatctgccagacacggt 112
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 255 tcgacggtacgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcg 314 |||||||| || ||||||||||| |||||||||||||| ||||| || |||||||| ||| Sbjct: 138166 tcgacggtgcggagcgccctccacacggcgctgttgcacttgaacccggagccgaacgcg 138225 Query: 315 atctgcca 322 |||||||| Sbjct: 138226 atctgcca 138233 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 345 cggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccg 404 |||| |||||||||| ||| ||||||||||||||||| |||||||| || |||||||| Sbjct: 138256 cggcccttggcctcggcgtacgcgagctcgtaccagagcgagctgctcgacgtgttgccc 138315 Query: 405 aacctgtagagcgt 418 ||| ||||||||| Sbjct: 138316 caccggtagagcgt 138329 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 ccaccttgggcacgtcgacgggga 213 ||||||||||||| |||||||||| Sbjct: 138095 ccaccttgggcacctcgacgggga 138118
>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02, complete sequence Length = 131922 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 330 |||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| Sbjct: 74860 ccagacggcgctgttgcacttgaagcctgagccgaagccgatctgccagacacggt 74915
>gb|AC116926.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1341F06, from chromosome 10, complete sequence Length = 102520 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 330 |||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| Sbjct: 99583 ccagacggcgctgttgcacttgaagcctgagccgaagccgatctgccagacacggt 99528
>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence Length = 144359 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 330 |||||||||||||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 71845 ccagacggcgctgttgcacttgaagccggagccgaagccgatctgccagacgcggt 71900 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 351 ttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacctg 410 ||||||||| ||| ||||||||||||||||| ||||||||| |||||| ||||||||| Sbjct: 71921 ttggcctcggcgtaggcgagctcgtaccagagcgagctgctgctggtgttcccgaacctg 71980 Query: 411 t 411 | Sbjct: 71981 t 71981
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 255 tcgacggtacgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcg 314 |||||||| || ||||||||||| |||||||||||||| ||||| || |||||||| ||| Sbjct: 21614647 tcgacggtgcggagcgccctccacacggcgctgttgcacttgaacccggagccgaacgcg 21614706 Query: 315 atctgcca 322 |||||||| Sbjct: 21614707 atctgcca 21614714 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 345 cggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccg 404 |||| |||||||||| ||| ||||||||||||||||| |||||||| || |||||||| Sbjct: 21614737 cggcccttggcctcggcgtacgcgagctcgtaccagagcgagctgctcgacgtgttgccc 21614796 Query: 405 aacctgtagagcgt 418 ||| ||||||||| Sbjct: 21614797 caccggtagagcgt 21614810 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 ccaccttgggcacgtcgacgggga 213 ||||||||||||| |||||||||| Sbjct: 21614576 ccaccttgggcacctcgacgggga 21614599 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 agaggtagctagctagcaag 136 |||||||||||||||||||| Sbjct: 655504 agaggtagctagctagcaag 655485
>dbj|AK120567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134A09, full insert sequence Length = 1536 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 255 tcgacggtacgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcg 314 |||||||| || ||||||||||| |||||||||||||| ||||| || |||||||| ||| Sbjct: 1202 tcgacggtgcggagcgccctccacacggcgctgttgcacttgaacccggagccgaacgcg 1143 Query: 315 atctgcca 322 |||||||| Sbjct: 1142 atctgcca 1135 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 345 cggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccg 404 |||| |||||||||| ||| ||||||||||||||||| |||||||| || |||||||| Sbjct: 1112 cggcccttggcctcggcgtacgcgagctcgtaccagagcgagctgctcgacgtgttgccc 1053 Query: 405 aacctgtagagcgt 418 ||| ||||||||| Sbjct: 1052 caccggtagagcgt 1039 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 ccaccttgggcacgtcgacgggga 213 ||||||||||||| |||||||||| Sbjct: 1273 ccaccttgggcacctcgacgggga 1250
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 255 tcgacggtacgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcg 314 |||||||| || ||||||||||| |||||||||||||| ||||| || |||||||| ||| Sbjct: 21924846 tcgacggtgcggagcgccctccacacggcgctgttgcacttgaacccggagccgaacgcg 21924905 Query: 315 atctgcca 322 |||||||| Sbjct: 21924906 atctgcca 21924913 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 345 cggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccg 404 |||| |||||||||| ||| ||||||||||||||||| |||||||| || |||||||| Sbjct: 21924936 cggcccttggcctcggcgtacgcgagctcgtaccagagcgagctgctcgacgtgttgccc 21924995 Query: 405 aacctgtagagcgt 418 ||| ||||||||| Sbjct: 21924996 caccggtagagcgt 21925009 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 ccaccttgggcacgtcgacgggga 213 ||||||||||||| |||||||||| Sbjct: 21924775 ccaccttgggcacctcgacgggga 21924798 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 agaggtagctagctagcaag 136 |||||||||||||||||||| Sbjct: 655504 agaggtagctagctagcaag 655485
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Minus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcc 334 |||||| ||||||||||| ||||| || |||||||| |||||||||| ||||||| || Sbjct: 58466 ccagaccgcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcggttgcc 58407 Query: 335 cttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgga 394 || || |||| |||||||||| ||| || ||||||||||| || ||||||||| Sbjct: 58406 gcgctggacgcggcccttggcctcggcgtacgccagctcgtaccacagcgagctgctgct 58347 Query: 395 ggtgttgccgaacc 408 |||||||||||||| Sbjct: 58346 ggtgttgccgaacc 58333
>dbj|AK119222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E03, full insert sequence Length = 2098 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Minus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcc 334 |||||| ||||||||||| ||||| || |||||||| |||||||||| ||||||| || Sbjct: 1616 ccagaccgcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcggttgcc 1557 Query: 335 cttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgga 394 || || |||| |||||||||| ||| || ||||||||||| || ||||||||| Sbjct: 1556 gcgctggacgcggcccttggcctcggcgtacgccagctcgtaccacagcgagctgctgct 1497 Query: 395 ggtgttgccgaacc 408 |||||||||||||| Sbjct: 1496 ggtgttgccgaacc 1483
>dbj|AK112059.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A11, full insert sequence Length = 2025 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Minus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcc 334 |||||| ||||||||||| ||||| || |||||||| |||||||||| ||||||| || Sbjct: 1616 ccagaccgcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcggttgcc 1557 Query: 335 cttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgga 394 || || |||| |||||||||| ||| || ||||||||||| || ||||||||| Sbjct: 1556 gcgctggacgcggcccttggcctcggcgtacgccagctcgtaccacagcgagctgctgct 1497 Query: 395 ggtgttgccgaacc 408 |||||||||||||| Sbjct: 1496 ggtgttgccgaacc 1483
>gb|AY105739.1| Zea mays PCO084555 mRNA sequence Length = 962 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 345 cggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccg 404 |||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 338 cggcccttggcctccatgtaggcgagctcgtaccagatggagctgctggaggtgttgccg 279 Query: 405 aa 406 || Sbjct: 278 aa 277 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 279 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 330 |||||||||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 404 acggcgctgttgcacttgaacccgctgccgaaggcgatctgccagacgcggt 353
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcc 334 |||||||||||||||||| ||||| || |||||| ||||||||||||| ||||| || Sbjct: 139376 ccagacggcgctgttgcacttgaacccgctgccgaacgcgatctgccagatgcggtggcc 139435 Query: 335 cttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgga 394 || ||||| ||||||||| ||| |||||||||||||||| ||||||||| || Sbjct: 139436 gcggcggacccggcccttggcctccatgtaggcgagctcgtaccagatggagctgctcga 139495 Query: 395 ggtgttgccgaa 406 ||||||||||| Sbjct: 139496 cgtgttgccgaa 139507
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Minus Query: 265 gcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccaga 324 |||||||| ||||||| ||||||||||| ||||| || || || ||||| |||||||||| Sbjct: 23226975 gcagcgccttccagactgcgctgttgcacttgaaaccagatccaaatgcaatctgccaga 23226916 Query: 325 cgcggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagaggg 384 | ||| | |||| |||||| | ||| |||||| ||| || ||||| |||||||| | Sbjct: 23226915 tcctgtcccgcttcctgatcctccccttcgcctcggtgtacgccagctcataccagagtg 23226856 Query: 385 agctgctggaggtgttgccgaacc 408 ||||||| || |||||||| |||| Sbjct: 23226855 agctgctcgatgtgttgccaaacc 23226832 Score = 50.1 bits (25), Expect = 0.006 Identities = 103/129 (79%) Strand = Plus / Plus Query: 280 cggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcccttct 339 ||||||||||||| |||||||| |||||||| ||||| ||| |||||||| || Sbjct: 8419685 cggcgctgttgcacttgaagccggagccgaacccgatcatccacacgcggtcgccggggc 8419744 Query: 340 tgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgt 399 || |||| |||||||||| ||| || ||||||||||| | |||||||| || |||| Sbjct: 8419745 gcatgcggcccttggcctcgatgtaggccagctcgtaccacaccgagctgctcgacgtgt 8419804 Query: 400 tgccgaacc 408 ||||||||| Sbjct: 8419805 tgccgaacc 8419813 Score = 48.1 bits (24), Expect = 0.023 Identities = 57/68 (83%) Strand = Plus / Plus Query: 350 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacct 409 |||||||||| ||| || ||||||||||| | |||||||| || ||||||||||||| Sbjct: 8656282 cttggcctcgacgtacgccagctcgtaccacaccgagctgctcgacgtgttgccgaaccg 8656341 Query: 410 gtagagcg 417 || ||||| Sbjct: 8656342 gtggagcg 8656349 Score = 48.1 bits (24), Expect = 0.023 Identities = 54/64 (84%) Strand = Plus / Minus Query: 345 cggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccg 404 |||| |||||||||| ||| || ||||||||||| | |||||||| || ||||||||| Sbjct: 8523443 cggcccttggcctcgatgtaggccagctcgtaccacaccgagctgctcgacgtgttgccg 8523384 Query: 405 aacc 408 |||| Sbjct: 8523383 aacc 8523380
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 330 |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 19951171 ccagacggtgctgttgcacttgaagcctgagccgaagctgatctgccagacgcggt 19951116
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24 Length = 148362 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 330 |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 54080 ccagacggtgctgttgcacttgaagcctgagccgaagctgatctgccagacgcggt 54025
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Minus Query: 265 gcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccaga 324 |||||||| ||||||| ||||||||||| ||||| || || || ||||| |||||||||| Sbjct: 61737 gcagcgccttccagactgcgctgttgcacttgaaaccagatccaaatgcaatctgccaga 61678 Query: 325 cgcggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagaggg 384 | ||| | |||| |||||| | ||| |||||| ||| || ||||| |||||||| | Sbjct: 61677 tcctgtcccgcttcctgatcctccccttcgcctcggtgtacgccagctcataccagagtg 61618 Query: 385 agctgctggaggtgttgccgaacc 408 ||||||| || |||||||| |||| Sbjct: 61617 agctgctcgatgtgttgccaaacc 61594
>dbj|AK119596.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D11, full insert sequence Length = 2378 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Minus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcc 334 |||||||||||||||||| ||||| || |||||| ||||||||||||| ||||| || Sbjct: 1699 ccagacggcgctgttgcacttgaacccgctgccgaacgcgatctgccagatgcggtggcc 1640 Query: 335 cttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgga 394 || ||||| ||||||||| ||| |||||||||||||||| ||||||||| || Sbjct: 1639 gcggcggacccggcccttggcctccatgtaggcgagctcgtaccagatggagctgctcga 1580 Query: 395 ggtgttgccgaa 406 ||||||||||| Sbjct: 1579 cgtgttgccgaa 1568
>dbj|AK101103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025C07, full insert sequence Length = 2356 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Minus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcc 334 |||||||||||||||||| ||||| || |||||| ||||||||||||| ||||| || Sbjct: 1700 ccagacggcgctgttgcacttgaacccgctgccgaacgcgatctgccagatgcggtggcc 1641 Query: 335 cttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctgga 394 || ||||| ||||||||| ||| |||||||||||||||| ||||||||| || Sbjct: 1640 gcggcggacccggcccttggcctccatgtaggcgagctcgtaccagatggagctgctcga 1581 Query: 395 ggtgttgccgaa 406 ||||||||||| Sbjct: 1580 cgtgttgccgaa 1569
>gb|AC140006.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0090D11, complete sequence Length = 115403 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 350 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacc 408 |||||||||| ||| ||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 110160 cttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaacc 110218 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 274 tccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 331 ||||||||||||||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 110084 tccagacggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtc 110141
>gb|AC104474.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024O21, complete sequence Length = 155651 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 350 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacc 408 |||||||||| ||| ||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 84757 cttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaacc 84815 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 274 tccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 331 ||||||||||||||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 84681 tccagacggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtc 84738
>dbj|AK106150.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-H08, full insert sequence Length = 1892 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 350 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacc 408 |||||||||| ||| ||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 1489 cttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaacc 1431 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 274 tccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 331 ||||||||||||||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 1565 tccagacggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtc 1508
>dbj|AK104714.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H10, full insert sequence Length = 1892 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 350 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacc 408 |||||||||| ||| ||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 1489 cttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaacc 1431 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 274 tccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 331 ||||||||||||||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 1565 tccagacggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtc 1508
>dbj|AK066587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074H08, full insert sequence Length = 1966 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 350 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacc 408 |||||||||| ||| ||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 1490 cttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaacc 1432 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 274 tccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 331 ||||||||||||||||||| ||||| || |||||| ||||||||||||||||||| Sbjct: 1566 tccagacggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcggtc 1509
>gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1576_F01, complete sequence Length = 119525 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 275 ccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggt 330 |||| |||| |||||||| ||||||||||||||||| ||||||||||||| |||| Sbjct: 56626 ccagtcggcactgttgcacttgaagcctgagccgaagccgatctgccagacacggt 56681
>ref|XM_464563.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1929 Score = 63.9 bits (32), Expect = 4e-07 Identities = 122/152 (80%) Strand = Plus / Minus Query: 267 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 326 ||||||||||| || ||||||||||| ||||| || || ||||| ||||||||||| || Sbjct: 1565 agcgccctccacaccgcgctgttgcacttgaacccggacccgaacgcgatctgccacacc 1506 Query: 327 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 386 | ||| | | || | | || | ||| ||||||| ||| || ||||||||||| || ||| Sbjct: 1505 ctgtccctcctcctcaccctccccttcgcctcgctgtacgccagctcgtaccacagcgag 1446 Query: 387 ctgctggaggtgttgccgaacctgtagagcgt 418 ||||| || ||||| || |||||||| ||||| Sbjct: 1445 ctgctcgacgtgttcccaaacctgtacagcgt 1414
>dbj|AK101377.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033036C04, full insert sequence Length = 2134 Score = 63.9 bits (32), Expect = 4e-07 Identities = 116/144 (80%) Strand = Plus / Minus Query: 265 gcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccaga 324 |||||||| ||||||| ||||||||||| ||||| || || || ||||| |||||||||| Sbjct: 1665 gcagcgccttccagactgcgctgttgcacttgaaaccagatccaaatgcaatctgccaga 1606 Query: 325 cgcggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagaggg 384 | ||| | |||| |||||| | ||| |||||| ||| || ||||| |||||||| | Sbjct: 1605 tcctgtcccgcttcctgatcctccccttcgcctcggtgtacgccagctcataccagagtg 1546 Query: 385 agctgctggaggtgttgccgaacc 408 ||||||| || || ||||| |||| Sbjct: 1545 agctgctcgatgttttgccaaacc 1522
>dbj|AK067907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127I02, full insert sequence Length = 1929 Score = 63.9 bits (32), Expect = 4e-07 Identities = 122/152 (80%) Strand = Plus / Minus Query: 267 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacg 326 ||||||||||| || ||||||||||| ||||| || || ||||| ||||||||||| || Sbjct: 1565 agcgccctccacaccgcgctgttgcacttgaacccggacccgaacgcgatctgccacacc 1506 Query: 327 cggtctcccttcttgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggag 386 | ||| | | || | | || | ||| ||||||| ||| || ||||||||||| || ||| Sbjct: 1505 ctgtccctcctcctcaccctccccttcgcctcgctgtacgccagctcgtaccacagcgag 1446 Query: 387 ctgctggaggtgttgccgaacctgtagagcgt 418 ||||| || ||||| || |||||||| ||||| Sbjct: 1445 ctgctcgacgtgttcccaaacctgtacagcgt 1414
>gb|AY308830.1| Marchantia polymorpha FAE3 gene, complete cds Length = 10158 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 369 agctcgtaccagagggagctgctggaggtgttgccgaacctgtagag 415 ||||||||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 5468 agctcgtaccacagagagctgctggacgtgtttccgaacctgtagag 5422
>gb|AY108343.1| Zea mays PCO065510 mRNA sequence Length = 1496 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 282 gcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 331 ||||||||||| |||||||| || ||||| |||| ||||||||||||||| Sbjct: 458 gcgctgttgcacttgaagcccgacccgaaggcgagctgccagacgcggtc 507
>ref|XM_470547.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1788 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 279 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 331 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||| Sbjct: 1700 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 1648
>dbj|AK119228.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-A08, full insert sequence Length = 1912 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 279 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 331 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||| Sbjct: 1595 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 1543
>dbj|AK100798.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121F20, full insert sequence Length = 662 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 279 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 331 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||| Sbjct: 345 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 293
>dbj|AK099232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094M20, full insert sequence Length = 1903 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 279 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 331 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||| Sbjct: 1586 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 1534
>dbj|AK061335.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-B10, full insert sequence Length = 1909 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 279 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 331 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||| Sbjct: 1595 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 1543
>dbj|AK060840.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D04, full insert sequence Length = 1907 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 279 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 331 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||| Sbjct: 1590 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 1538
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 279 acggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtc 331 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||| Sbjct: 81751 acggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcggtc 81699
>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056C19 Length = 147739 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 267 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgcca 322 ||||||||||| || ||||||||||| ||||| || || ||||| ||||||||||| Sbjct: 108883 agcgccctccacaccgcgctgttgcacttgaacccggacccgaacgcgatctgcca 108938
>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544H11 Length = 178376 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 267 agcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgcca 322 ||||||||||| || ||||||||||| ||||| || || ||||| ||||||||||| Sbjct: 160464 agcgccctccacaccgcgctgttgcacttgaacccggacccgaacgcgatctgcca 160519
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence Length = 183990 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 366 gcgagctcgtaccagagggagctgctggaggtgttgccgaacctgtagagcgt 418 |||||||| ||||| || ||||||||||||||||| || ||| ||||||||| Sbjct: 5318 gcgagctcataccacagcgagctgctggaggtgttcccccaccggtagagcgt 5266 Score = 46.1 bits (23), Expect = 0.091 Identities = 56/67 (83%) Strand = Plus / Minus Query: 264 cgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccag 323 |||||||| | ||| || ||||||||||| ||||| ||||| || || |||||||| || Sbjct: 5420 cgcagcgcgcgccacacagcgctgttgcacttgaaccctgacccaaaggcgatctggcac 5361 Query: 324 acgcggt 330 ||||||| Sbjct: 5360 acgcggt 5354
>gb|AF527808.1| Sorghum bicolor clone BAC SBTXS_0040L6 php200725 orthologous region Length = 90923 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 366 gcgagctcgtaccagagggagctgctggaggtgttgccgaacctgtagagcgt 418 |||||||| ||||| || ||||||||||||||||| || ||| ||||||||| Sbjct: 10329 gcgagctcataccacagcgagctgctggaggtgttcccccaccggtagagcgt 10381 Score = 46.1 bits (23), Expect = 0.091 Identities = 56/67 (83%) Strand = Plus / Plus Query: 264 cgcagcgccctccagacggcgctgttgcatttgaagcctgagccgaatgcgatctgccag 323 |||||||| | ||| || ||||||||||| ||||| ||||| || || |||||||| || Sbjct: 10227 cgcagcgcgcgccacacagcgctgttgcacttgaaccctgacccaaaggcgatctggcac 10286 Query: 324 acgcggt 330 ||||||| Sbjct: 10287 acgcggt 10293
>dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0092H22 Length = 165194 Score = 50.1 bits (25), Expect = 0.006 Identities = 103/129 (79%) Strand = Plus / Plus Query: 280 cggcgctgttgcatttgaagcctgagccgaatgcgatctgccagacgcggtctcccttct 339 ||||||||||||| |||||||| |||||||| ||||| ||| |||||||| || Sbjct: 34386 cggcgctgttgcacttgaagccggagccgaacccgatcatccacacgcggtcgccggggc 34445 Query: 340 tgatccggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgt 399 || |||| |||||||||| ||| || ||||||||||| | |||||||| || |||| Sbjct: 34446 gcatgcggcccttggcctcgatgtaggccagctcgtaccacaccgagctgctcgacgtgt 34505 Query: 400 tgccgaacc 408 ||||||||| Sbjct: 34506 tgccgaacc 34514 Score = 48.1 bits (24), Expect = 0.023 Identities = 54/64 (84%) Strand = Plus / Minus Query: 345 cggcgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccg 404 |||| |||||||||| ||| || ||||||||||| | |||||||| || ||||||||| Sbjct: 138144 cggcccttggcctcgatgtaggccagctcgtaccacaccgagctgctcgacgtgttgccg 138085 Query: 405 aacc 408 |||| Sbjct: 138084 aacc 138081
>gb|AY183914.1| Marchantia polymorpha beta-ketoacyl-CoA-synthase gene, complete cds Length = 9798 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 384 gagctgctggaggtgttgccgaacctgtagag 415 |||||||| ||||||||||| ||||||||||| Sbjct: 6481 gagctgctcgaggtgttgccaaacctgtagag 6450
>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0037N01 Length = 174085 Score = 48.1 bits (24), Expect = 0.023 Identities = 57/68 (83%) Strand = Plus / Plus Query: 350 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacct 409 |||||||||| ||| || ||||||||||| | |||||||| || ||||||||||||| Sbjct: 71264 cttggcctcgacgtacgccagctcgtaccacaccgagctgctcgacgtgttgccgaaccg 71323 Query: 410 gtagagcg 417 || ||||| Sbjct: 71324 gtggagcg 71331
>dbj|AP004630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0031A09 Length = 162511 Score = 48.1 bits (24), Expect = 0.023 Identities = 57/68 (83%) Strand = Plus / Plus Query: 350 cttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaacct 409 |||||||||| ||| || ||||||||||| | |||||||| || ||||||||||||| Sbjct: 131101 cttggcctcgacgtacgccagctcgtaccacaccgagctgctcgacgtgttgccgaaccg 131160 Query: 410 gtagagcg 417 || ||||| Sbjct: 131161 gtggagcg 131168
>ref|XM_450594.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1737 Score = 44.1 bits (22), Expect = 0.36 Identities = 52/62 (83%) Strand = Plus / Minus Query: 348 cgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaac 407 ||||||||||| |||| ||||||||||| ||| | |||||| || |||||||||||| Sbjct: 1266 cgcttggcctcaaagtaggcgagctcgtagaagacgaggctgctcgacgtgttgccgaac 1207 Query: 408 ct 409 || Sbjct: 1206 ct 1205
>gb|BT009560.1| Triticum aestivum clone wre1n.pk0001.h6:fis, full insert mRNA sequence Length = 1565 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 128 gctagcaagctagagctagagctaga 153 |||||| ||||||||||||||||||| Sbjct: 1443 gctagctagctagagctagagctaga 1468
>emb|BX901898.15| Zebrafish DNA sequence from clone DKEY-148E3 in linkage group 1, complete sequence Length = 249378 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 50 ctaattaaaataaattaaataa 71 |||||||||||||||||||||| Sbjct: 15934 ctaattaaaataaattaaataa 15913
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.36 Identities = 52/62 (83%) Strand = Plus / Plus Query: 348 cgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaac 407 ||||||||||| |||| ||||||||||| ||| | |||||| || |||||||||||| Sbjct: 11690577 cgcttggcctcaaagtaggcgagctcgtagaagacgaggctgctcgacgtgttgccgaac 11690636 Query: 408 ct 409 || Sbjct: 11690637 ct 11690638
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 44.1 bits (22), Expect = 0.36 Identities = 52/62 (83%) Strand = Plus / Plus Query: 348 cgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaac 407 ||||||||||| |||| ||||||||||| ||| | |||||| || |||||||||||| Sbjct: 125211 cgcttggcctcaaagtaggcgagctcgtagaagacgaggctgctcgacgtgttgccgaac 125270 Query: 408 ct 409 || Sbjct: 125271 ct 125272
>dbj|AK105487.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-B09, full insert sequence Length = 1737 Score = 44.1 bits (22), Expect = 0.36 Identities = 52/62 (83%) Strand = Plus / Minus Query: 348 cgcttggcctcgcagtatgcgagctcgtaccagagggagctgctggaggtgttgccgaac 407 ||||||||||| |||| ||||||||||| ||| | |||||| || |||||||||||| Sbjct: 1266 cgcttggcctcaaagtaggcgagctcgtagaagacgaggctgctcgacgtgttgccgaac 1207 Query: 408 ct 409 || Sbjct: 1206 ct 1205
>gb|AC147163.2| Mus musculus BAC clone RP24-317B17 from chromosome Y, complete sequence Length = 208700 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 122 tagctagctagcaagctagagctag 146 |||||||||||| |||||||||||| Sbjct: 32894 tagctagctagctagctagagctag 32870
>gb|BT013651.1| Lycopersicon esculentum clone 132458F, mRNA sequence Length = 2126 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 372 tcgtaccagagggagctgctggaggtgtt 400 |||||||| ||||||||||| |||||||| Sbjct: 1662 tcgtaccaaagggagctgcttgaggtgtt 1634
>gb|AC145593.3| Mus musculus BAC clone RP24-186P6 from chromosome Y, complete sequence Length = 162710 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 tagctagctagcaagctagagctag 146 |||||||||||| |||||||||||| Sbjct: 125255 tagctagctagctagctagagctag 125279
>gb|AC132341.4| Mus musculus BAC clone RP24-168C11 from chromosome Y, complete sequence Length = 142720 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 tagctagctagcaagctagagctag 146 |||||||||||| |||||||||||| Sbjct: 63389 tagctagctagctagctagagctag 63413
>gb|AC140427.3| Mus musculus BAC clone RP24-173G7 from chromosome Y, complete sequence Length = 182766 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 122 tagctagctagcaagctagagctag 146 |||||||||||| |||||||||||| Sbjct: 135033 tagctagctagctagctagagctag 135009
>gb|AC139196.4| Mus musculus BAC clone RP24-189L24 from chromosome Y, complete sequence Length = 143221 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 tagctagctagcaagctagagctag 146 |||||||||||| |||||||||||| Sbjct: 109963 tagctagctagctagctagagctag 109987
>gb|AC144409.3| Mus musculus BAC clone RP24-302I24 from chromosome Y, complete sequence Length = 148555 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 tagctagctagcaagctagagctag 146 |||||||||||| |||||||||||| Sbjct: 5043 tagctagctagctagctagagctag 5067
>emb|CR376773.7| Zebrafish DNA sequence from clone CH211-23E22 in linkage group 17, complete sequence Length = 167088 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 taattaaaataaattaaataa 71 ||||||||||||||||||||| Sbjct: 33892 taattaaaataaattaaataa 33872
>gb|AY126293.1| Mus musculus isolate 0070.HH58 M-MuLV retroviral integration site Length = 568 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 13 ttattaatcaaaacatagagtaaaa 37 ||||||| ||||||||||||||||| Sbjct: 437 ttattaagcaaaacatagagtaaaa 413
>gb|AC117574.7| Mus musculus chromosome 5, clone RP23-32E20, complete sequence Length = 255008 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 13 ttattaatcaaaacatagagtaaaa 37 ||||||| ||||||||||||||||| Sbjct: 39496 ttattaagcaaaacatagagtaaaa 39472
>emb|AL512426.9| Human DNA sequence from clone RP11-94K8 on chromosome 6 Contains the 3' end of a novel gene, complete sequence Length = 55224 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 122 tagctagctagcaagctagagctag 146 |||||||||||| |||||||||||| Sbjct: 33915 tagctagctagctagctagagctag 33891
>emb|AL390840.17| Human DNA sequence from clone RP13-213K19 on chromosome X Contains a tubulin beta polypeptide pseudogene, complete sequence Length = 197611 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 taattaaaataaattaaataa 71 ||||||||||||||||||||| Sbjct: 6240 taattaaaataaattaaataa 6220
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 cggcgtcgtcgacggtacgca 267 ||||||||||||||||||||| Sbjct: 381106 cggcgtcgtcgacggtacgca 381086
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 acgtcgacggggagcaggtgg 221 ||||||||||||||||||||| Sbjct: 1305626 acgtcgacggggagcaggtgg 1305606
>emb|CR382400.1| Plasmodium falciparum chromosome 6, complete sequence; segment 3/5 Length = 348034 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 taattaaaataaattaaataa 71 ||||||||||||||||||||| Sbjct: 146876 taattaaaataaattaaataa 146856 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 taattaaaataaattaaataa 71 ||||||||||||||||||||| Sbjct: 146519 taattaaaataaattaaataa 146499
>gb|AC100873.2| Homo sapiens chromosome 8, clone RP11-978P4, complete sequence Length = 153581 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 taattaaaataaattaaataa 71 ||||||||||||||||||||| Sbjct: 31182 taattaaaataaattaaataa 31202
>gb|AC132294.4| Mus musculus BAC clone RP24-324F17 from chromosome y, complete sequence Length = 174347 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 tagctagctagcaagctagagctag 146 |||||||||||| |||||||||||| Sbjct: 144078 tagctagctagctagctagagctag 144102
>gb|AC182730.2| Mus musculus BAC clone RP24-254G5 from chromosome y, complete sequence Length = 162064 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 tagctagctagcaagctagagctag 146 |||||||||||| |||||||||||| Sbjct: 78768 tagctagctagctagctagagctag 78792
>gb|AC027287.21| Homo sapiens 12 BAC RP11-616L12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 202703 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 taattaaaataaattaaataa 71 ||||||||||||||||||||| Sbjct: 194673 taattaaaataaattaaataa 194653
>gb|AC021500.6| Homo sapiens chromosome 8, clone RP11-135K1, complete sequence Length = 160348 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 taattaaaataaattaaataa 71 ||||||||||||||||||||| Sbjct: 110529 taattaaaataaattaaataa 110509
>gb|AC175381.3| Mus musculus BAC clone RP24-195K22 from chromosome y, complete sequence Length = 159477 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 tagctagctagcaagctagagctag 146 |||||||||||| |||||||||||| Sbjct: 91592 tagctagctagctagctagagctag 91616
>emb|BX664625.12| Zebrafish DNA sequence from clone DKEY-286J17 in linkage group 22, complete sequence Length = 142350 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 taattaaaataaattaaataa 71 ||||||||||||||||||||| Sbjct: 110283 taattaaaataaattaaataa 110263
>emb|BX649547.7| Zebrafish DNA sequence from clone DKEY-19E10 in linkage group 3, complete sequence Length = 237569 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 taattaaaataaattaaataa 71 ||||||||||||||||||||| Sbjct: 182928 taattaaaataaattaaataa 182908
>emb|BX548032.5| Zebrafish DNA sequence from clone CH211-145G9 in linkage group 17, complete sequence Length = 161483 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 taattaaaataaattaaataa 71 ||||||||||||||||||||| Sbjct: 85874 taattaaaataaattaaataa 85854
>gb|AF254136.3| Homo sapiens chromosome 8 clone RP11-386F22, RP11-820H12 map q24.2, complete sequence Length = 184865 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 taattaaaataaattaaataa 71 ||||||||||||||||||||| Sbjct: 22028 taattaaaataaattaaataa 22048
>emb|AL929390.14| Mouse DNA sequence from clone RP23-107J3 on chromosome 4, complete sequence Length = 146977 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 aaaaagaagttattaatcaaa 24 ||||||||||||||||||||| Sbjct: 99296 aaaaagaagttattaatcaaa 99316
>emb|BX004996.8| Zebrafish DNA sequence from clone CH211-268F23 in linkage group 6, complete sequence Length = 167320 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 taattaaaataaattaaataa 71 ||||||||||||||||||||| Sbjct: 8621 taattaaaataaattaaataa 8601
>emb|AJ486858.1|AAN486858 Anguilla anguilla mRNA for putative sodium-potassium-chloride cotransporter (nkcc1a gene) Length = 4063 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 ggtagctagctagcaagctag 140 ||||||||||||||||||||| Sbjct: 255 ggtagctagctagcaagctag 235
>dbj|AB024028.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K1G2 Length = 70952 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 cctaattaaaataaattaaat 69 ||||||||||||||||||||| Sbjct: 4815 cctaattaaaataaattaaat 4795
>emb|BX511259.14| Zebrafish DNA sequence from clone CH211-125E6 in linkage group 9, complete sequence Length = 182412 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 taattaaaataaattaaataa 71 ||||||||||||||||||||| Sbjct: 86054 taattaaaataaattaaataa 86074
>emb|AL954843.8| Zebrafish DNA sequence from clone DKEY-149K8 in linkage group 15, complete sequence Length = 204599 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 taattaaaataaattaaataa 71 ||||||||||||||||||||| Sbjct: 142247 taattaaaataaattaaataa 142267
>gb|AC138666.6| Mus musculus chromosome 5, clone RP24-140D11, complete sequence Length = 209938 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ttattaatcaaaacatagagtaaaa 37 ||||||| ||||||||||||||||| Sbjct: 36727 ttattaagcaaaacatagagtaaaa 36751
>gb|AC142490.3| Mus musculus BAC clone RP24-362J19 from Y, complete sequence Length = 184480 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 122 tagctagctagcaagctagagctag 146 |||||||||||| |||||||||||| Sbjct: 179451 tagctagctagctagctagagctag 179427
>gb|AC151298.3| Mus musculus BAC clone RP23-7F9 from chromosome 17, complete sequence Length = 198349 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 taaaataaattaaataagcct 75 ||||||||||||||||||||| Sbjct: 96984 taaaataaattaaataagcct 96964
>gb|AC104316.3| Homo sapiens chromosome 8 clone RP11-557C18 map 8q24.2, complete sequence Length = 166862 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 taattaaaataaattaaataa 71 ||||||||||||||||||||| Sbjct: 153805 taattaaaataaattaaataa 153825
>gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome 14, complete sequence Length = 200560 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cctaattaaaataaattaaa 68 |||||||||||||||||||| Sbjct: 167628 cctaattaaaataaattaaa 167609
>ref|XM_478776.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3961 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 ggagctgctggaggtgttgc 402 |||||||||||||||||||| Sbjct: 3029 ggagctgctggaggtgttgc 3048
>gb|AC163443.6| Mus musculus chromosome 15, clone RP23-284G17, complete sequence Length = 213017 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cctaattaaaataaattaaa 68 |||||||||||||||||||| Sbjct: 114753 cctaattaaaataaattaaa 114734
>gb|AC150871.4| Bos taurus BAC CH240-316E7 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 167244 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 ctaattaaaataaattaaataagc 73 |||||||||||||||||| ||||| Sbjct: 71938 ctaattaaaataaattaattaagc 71961
>gb|AC149296.1| Populus trichocarpa clone Pop1-012O23, complete sequence Length = 123280 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 gtagctagctagcaagctag 140 |||||||||||||||||||| Sbjct: 104986 gtagctagctagcaagctag 104967
>gb|AC147258.2| Mus musculus BAC clone RP24-297K13 from chromosome 9, complete sequence Length = 156497 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cctaattaaaataaattaaa 68 |||||||||||||||||||| Sbjct: 31315 cctaattaaaataaattaaa 31334
>ref|XM_849525.1| PREDICTED: Canis familiaris similar to Transcription initiation factor TFIID subunit 12 (Transcription initiation factor TFIID 20/15 kDa subunits) (TAFII-20/TAFII-15) (TAFII20/TAFII15) (LOC612995), mRNA Length = 1034 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 aaagaagttattaatcaaaa 25 |||||||||||||||||||| Sbjct: 1008 aaagaagttattaatcaaaa 1027
>gb|AC122252.4| Mus musculus BAC clone RP23-170E7 from chromosome 17, complete sequence Length = 219695 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cagagggagctgctggaggt 397 |||||||||||||||||||| Sbjct: 114554 cagagggagctgctggaggt 114573
>gb|AC121793.3| Mus musculus BAC clone RP23-407B23 from chromosome 9, complete sequence Length = 194815 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 agctagagctagagctagat 154 |||||||||||||||||||| Sbjct: 45577 agctagagctagagctagat 45558
>gb|AC069564.34| Mus musculus strain C57BL/6J chromosome 17 clone rp23-435n13, complete sequence Length = 185784 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 cagagggagctgctggaggt 397 |||||||||||||||||||| Sbjct: 5315 cagagggagctgctggaggt 5296
>emb|BX897746.7| Zebrafish DNA sequence from clone DKEY-112E1 in linkage group 14, complete sequence Length = 98532 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 1356 aattaaaataaattaaataa 1375
>emb|BX897686.8| Zebrafish DNA sequence from clone DKEY-145M5 in linkage group 15, complete sequence Length = 115533 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ctaattaaaataaattaaat 69 |||||||||||||||||||| Sbjct: 91228 ctaattaaaataaattaaat 91209
>emb|CR855267.20| Zebrafish DNA sequence from clone DKEY-220L13, complete sequence Length = 142801 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 140160 aattaaaataaattaaataa 140179
>emb|AL391994.28| Human DNA sequence from clone RP11-382D8 on chromosome 1 Contains the 5' end of the ARID4B gene for AT rich interactive domain 4B (RBP1- like), a ribosomal protein L23a (RPL23A) pseudogene, ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans) (UBE2G10 pseudogene, the GGPS1 gene for geranylgeranyl diphosphate synthase 1 and two CpG islands, complete sequence Length = 142273 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 132325 aattaaaataaattaaataa 132344
>gb|AC018977.9| Homo sapiens chromosome 10 clone RP11-386C23, complete sequence Length = 222810 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 187213 aattaaaataaattaaataa 187194
>emb|AL136091.6| Human DNA sequence from clone RP1-80E10 on chromosome 6 Contains the 3' end of a ribosomal protein S15a (RPS15A) pseudogene, complete sequence Length = 16242 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cctaattaaaataaattaaa 68 |||||||||||||||||||| Sbjct: 14746 cctaattaaaataaattaaa 14727
>emb|X73282.1|CPGPD Claviceps purpurea GPD 1 gene for glyceraldehyde-3-phosphate dehydrogenase Length = 3495 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 aagctagagctagagctaga 153 |||||||||||||||||||| Sbjct: 1705 aagctagagctagagctaga 1686
>gb|DQ431198.1| Homo sapiens interleukin 9 receptor (IL9Rps) pseudogene, complete sequence; and DNA-directed RNA polymerases III 12.5 kDa polypeptide (POLR3K), U11/U12 snRNP 25 kDa protein (C16orf33), RHBDG1 (C16orf8), DNA-3-methyladenine glycosylase (MPG), -14 gene protein (C16orf35), hemoglobin zeta subunit (HBZ), HBD (HBD), alpha globin (HBA2), alpha globin (HBA1), theta globin (HBQ1), and putative RNA-binding protein Luc7-like 1 (LUC7L) genes, complete cds Length = 214426 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 189107 aattaaaataaattaaataa 189126
>emb|CR854914.10| Zebrafish DNA sequence from clone DKEY-256M11 in linkage group 5, complete sequence Length = 103750 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 5173 aattaaaataaattaaataa 5154
>emb|AL646056.18| Mouse DNA sequence from clone RP23-412O18 on chromosome 11, complete sequence Length = 111791 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 aagctagagctagagctaga 153 |||||||||||||||||||| Sbjct: 25251 aagctagagctagagctaga 25232
>gb|AE006462.1| Homo sapiens 16p13.3 sequence section 1 of 8 Length = 258002 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 209408 aattaaaataaattaaataa 209427
>emb|AL731821.10| Mouse DNA sequence from clone RP23-81G15 on chromosome 4, complete sequence Length = 126671 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 agctagagctagagctagat 154 |||||||||||||||||||| Sbjct: 104199 agctagagctagagctagat 104180
>emb|AL627305.12| Zebrafish DNA sequence from clone RP71-1H20 in linkage group 21 Contains a part of a novel gene similar to human ADD1 (alpha adducin 1), a novel gene, three putative novel genes and five CpG islands, complete sequence Length = 150276 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 33407 aattaaaataaattaaataa 33426
>emb|AL627261.10| Zebrafish DNA sequence from clone RP71-1N11 in linkage group 9 Contains three CpG islands, complete sequence Length = 147392 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 82601 aattaaaataaattaaataa 82582
>gb|AY271630.1| Amycolatopsis lactamdurans isolate AAL14 putative NRPS gene, partial cds Length = 699 Score = 40.1 bits (20), Expect = 5.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 181 cgatgggcaccaccttgggcacgtcgacggggagcaggtg 220 ||||||||||||| | |||||||||| |||| ||| |||| Sbjct: 498 cgatgggcaccacgtcgggcacgtcgccgggcagcgggtg 459
>emb|BX649389.12| Zebrafish DNA sequence from clone DKEY-28D3 in linkage group 1, complete sequence Length = 110743 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cctaattaaaataaattaaa 68 |||||||||||||||||||| Sbjct: 16088 cctaattaaaataaattaaa 16069
>emb|BX511308.11| Zebrafish DNA sequence from clone DKEYP-118E10 in linkage group 15, complete sequence Length = 123109 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ctaattaaaataaattaaat 69 |||||||||||||||||||| Sbjct: 58923 ctaattaaaataaattaaat 58942
>emb|BX548035.8| Zebrafish DNA sequence from clone CH211-190F24 in linkage group 24, complete sequence Length = 156349 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 116714 aattaaaataaattaaataa 116733
>gb|AC112250.4| Homo sapiens BAC clone RP11-710E1 from 4, complete sequence Length = 79475 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 gggagcaggtggaggtcctg 229 |||||||||||||||||||| Sbjct: 72983 gggagcaggtggaggtcctg 72964
>gb|AF275231.1| Phloeomyzus passerinii 12S small subunit ribosomal RNA gene, partial sequence; tRNA-Val gene, complete sequence; and 16S large subunit ribosomal RNA gene, partial sequence; mitochondrial genes for mitochondrial products Length = 1635 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 971 aattaaaataaattaaataa 952
>gb|AC008846.7| Homo sapiens chromosome 5 clone CTD-2165G8, complete sequence Length = 92740 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 50835 aattaaaataaattaaataa 50816
>gb|AC024561.5| Homo sapiens chromosome 5 clone CTB-94B10, complete sequence Length = 155125 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 78261 aattaaaataaattaaataa 78280
>emb|BX323446.10| Zebrafish DNA sequence from clone DKEYP-99F11 in linkage group 17, complete sequence Length = 184290 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 128436 aattaaaataaattaaataa 128455
>emb|BX465229.7| Zebrafish DNA sequence from clone CH211-174D2 in linkage group 2, complete sequence Length = 154954 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 28708 aattaaaataaattaaataa 28689
>gb|AC123660.8| Mus musculus chromosome 3, clone RP23-196E24, complete sequence Length = 211632 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 taattaaaataaattaaata 70 |||||||||||||||||||| Sbjct: 13786 taattaaaataaattaaata 13805
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 tctcgccggcgtcgtcgacg 260 |||||||||||||||||||| Sbjct: 820360 tctcgccggcgtcgtcgacg 820379
>emb|BX248327.7| Zebrafish DNA sequence from clone CH211-206E6, complete sequence Length = 163307 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 645 aattaaaataaattaaataa 626
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 agctagagctagagctagat 154 |||||||||||||||||||| Sbjct: 15368668 agctagagctagagctagat 15368687
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 agccagaggtagctagctagcaag 136 ||||||| |||||||||||||||| Sbjct: 25392731 agccagatgtagctagctagcaag 25392754
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 ggagctgctggaggtgttgc 402 |||||||||||||||||||| Sbjct: 22997024 ggagctgctggaggtgttgc 22997005
>emb|BX005443.17| Zebrafish DNA sequence from clone CH211-167L23 in linkage group 17, complete sequence Length = 132502 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 4698 aattaaaataaattaaataa 4679
>gb|AC124420.4| Mus musculus BAC clone RP24-322N8 from chromosome 12, complete sequence Length = 164950 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cctaattaaaataaattaaa 68 |||||||||||||||||||| Sbjct: 96590 cctaattaaaataaattaaa 96609
>gb|AC009970.10| Homo sapiens BAC clone RP11-440P5 from 2, complete sequence Length = 137009 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 aagctagagctagagctaga 153 |||||||||||||||||||| Sbjct: 24679 aagctagagctagagctaga 24698
>gb|AC112666.9| Mus musculus chromosome 3, clone RP24-119D5, complete sequence Length = 193302 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 taattaaaataaattaaata 70 |||||||||||||||||||| Sbjct: 75956 taattaaaataaattaaata 75975
>gb|AC091983.3| Homo sapiens chromosome 5 clone RP11-559F22, complete sequence Length = 110999 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 28130 aattaaaataaattaaataa 28149
>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1121_A05 Length = 172668 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 ggagctgctggaggtgttgc 402 |||||||||||||||||||| Sbjct: 72238 ggagctgctggaggtgttgc 72219
>emb|BX248311.6| Zebrafish DNA sequence from clone BUSM1-71F1 in linkage group 9, complete sequence Length = 143593 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 135096 aattaaaataaattaaataa 135115
>emb|BX247871.7| Zebrafish DNA sequence from clone CH211-190P8, complete sequence Length = 145789 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 126828 aattaaaataaattaaataa 126809
>emb|BX005122.10| Zebrafish DNA sequence from clone CH211-134D11, complete sequence Length = 184142 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 118897 aattaaaataaattaaataa 118916
>dbj|BS000065.1| Pan troglodytes chromosome 22 clone:RP43-042H09, map 22, complete sequences Length = 154519 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 ccgcctaattaaaataaattaaat 69 ||||||||||||||||||| |||| Sbjct: 27259 ccgcctaattaaaataaataaaat 27236
>dbj|BS000064.1| Pan troglodytes chromosome 22 clone:RP43-044K09, map 22, complete sequences Length = 178960 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 ccgcctaattaaaataaattaaat 69 ||||||||||||||||||| |||| Sbjct: 134721 ccgcctaattaaaataaataaaat 134698
>emb|AL928618.10| Zebrafish DNA sequence from clone CH211-10O8, complete sequence Length = 103507 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 ccagagggagctgctggagg 396 |||||||||||||||||||| Sbjct: 101087 ccagagggagctgctggagg 101106
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 agccagaggtagctagctagcaag 136 ||||||| |||||||||||||||| Sbjct: 24047 agccagatgtagctagctagcaag 24070
>dbj|AK099771.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095D13, full insert sequence Length = 3961 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 ggagctgctggaggtgttgc 402 |||||||||||||||||||| Sbjct: 3029 ggagctgctggaggtgttgc 3048
>dbj|AK067380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099N15, full insert sequence Length = 1636 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 ggagctgctggaggtgttgc 402 |||||||||||||||||||| Sbjct: 929 ggagctgctggaggtgttgc 948
>emb|AL732415.9| Zebrafish DNA sequence from clone BUSM1-106A20 in linkage group 9, complete sequence Length = 112460 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 99453 aattaaaataaattaaataa 99434
>gb|AY108404.1| Zea mays PCO135296 mRNA sequence Length = 554 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 345 cggcgcttggcctcgcagtatgcgagctcgta 376 ||||||||||||||| |||| || |||||||| Sbjct: 91 cggcgcttggcctcgaagtaggccagctcgta 60
>gb|AF152064.1|AF152064 Anastrepha dryas 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 852 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 218 aattaaaataaattaaataa 199
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 tcttgatccggcgcttggcc 356 |||||||||||||||||||| Sbjct: 2025743 tcttgatccggcgcttggcc 2025762
>emb|AL662972.3|OSJN00173 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063G07, complete sequence Length = 157622 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 agctagagctagagctagat 154 |||||||||||||||||||| Sbjct: 57552 agctagagctagagctagat 57571
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 agaggtagctagctagcaag 136 |||||||||||||||||||| Sbjct: 87468 agaggtagctagctagcaag 87487
>gb|AC127691.4| Mus musculus BAC clone RP24-216M10 from 9, complete sequence Length = 153242 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cctaattaaaataaattaaa 68 |||||||||||||||||||| Sbjct: 108910 cctaattaaaataaattaaa 108929
>gb|AC135360.3| Mus musculus BAC clone RP24-396P4 from 10, complete sequence Length = 154276 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 accagagggagctgctggag 395 |||||||||||||||||||| Sbjct: 37580 accagagggagctgctggag 37561
>emb|Z69890.1|HSRJ14 Human DNA sequence from clone XX-CRJ14 on chromosome 16, complete sequence Length = 28265 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 14253 aattaaaataaattaaataa 14272
>emb|AL953906.6| Mouse DNA sequence from clone RP23-109E21 on chromosome 2, complete sequence Length = 172246 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aattaaaataaattaaataa 71 |||||||||||||||||||| Sbjct: 113414 aattaaaataaattaaataa 113433
>emb|AL845285.5| Mouse DNA sequence from clone RP23-167M2 on chromosome 2, complete sequence Length = 143280 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cctaattaaaataaattaaa 68 |||||||||||||||||||| Sbjct: 123246 cctaattaaaataaattaaa 123265
>emb|X83420.1|LEALUI L.esculentum mRNA for Alu I-fragment Length = 268 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 372 tcgtaccagagggagctgctggaggtgttgcc 403 |||||||| ||||||||||| || |||||||| Sbjct: 47 tcgtaccaaagggagctgcttgaagtgttgcc 16
>emb|AL845449.4| Mouse DNA sequence from clone RP23-211M20 on chromosome 2, complete sequence Length = 226324 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 taattaaaataaattaaata 70 |||||||||||||||||||| Sbjct: 61541 taattaaaataaattaaata 61560
>emb|AL805953.5| Mouse DNA sequence from clone RP23-189N21 on chromosome 2, complete sequence Length = 173345 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 cctccagacggcgctgttgcattt 295 |||||||| ||||||||||||||| Sbjct: 67819 cctccagagggcgctgttgcattt 67796 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,859,014 Number of Sequences: 3902068 Number of extensions: 3859014 Number of successful extensions: 118234 Number of sequences better than 10.0: 179 Number of HSP's better than 10.0 without gapping: 188 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116322 Number of HSP's gapped (non-prelim): 1893 length of query: 418 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 396 effective length of database: 17,147,199,772 effective search space: 6790291109712 effective search space used: 6790291109712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
