>gb|U80806.1|HPU80806 Hydrogenophaga pseudoflava carbon monoxide dehydrogenase middle
            subunit CutM, small subunit CutS and large subunit CutL
            genes, complete cds
          Length = 4394

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 336  cggccatggcggtcttgtagtcg 358
            |||||||||||||||||||||||
Sbjct: 1332 cggccatggcggtcttgtagtcg 1310

>emb|AL355593.21| Human DNA sequence from clone RP11-99E24 on chromosome Xq21.32-22.3
            Contains the PCDH19 gene for protocadherin 19 protein and
            a CpG island, complete sequence
          Length = 168065

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 54   acatcaattttcacttattcgtatgc 79
            |||| |||||||||||||||||||||
Sbjct: 3045 acattaattttcacttattcgtatgc 3070

>emb|X77931.1|PTC2CUTAC P.thermocarboxydovorans (C2) cut A, cut B and cut C genes
          Length = 4723

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 329  atctcgacggccatggcggtcttgta 354
            |||||| |||||||||||||||||||
Sbjct: 1032 atctcggcggccatggcggtcttgta 1007

>ref|XM_478780.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1843

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 355 gtcgcggaggccatggaggtg 375
           |||||||||||||||||||||
Sbjct: 192 gtcgcggaggccatggaggtg 212

>gb|AC110023.3| Homo sapiens chromosome 15, clone RP11-739G5, complete sequence
          Length = 166975

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 103    actcttgctaatttttcttgc 123
              |||||||||||||||||||||
Sbjct: 107335 actcttgctaatttttcttgc 107315

>gb|AC090762.9| Homo sapiens chromosome 15, clone RP11-387E8, complete sequence
          Length = 192826

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 103   actcttgctaatttttcttgc 123
             |||||||||||||||||||||
Sbjct: 77783 actcttgctaatttttcttgc 77763

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 355      gtcgcggaggccatggaggtg 375
                |||||||||||||||||||||
Sbjct: 23031365 gtcgcggaggccatggaggtg 23031345

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 254      agagcaattctctcttcaaat 274
                |||||||||||||||||||||
Sbjct: 28935522 agagcaattctctcttcaaat 28935502

>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1121_A05
          Length = 172668

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 355    gtcgcggaggccatggaggtg 375
              |||||||||||||||||||||
Sbjct: 106579 gtcgcggaggccatggaggtg 106559

>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1218_D07
          Length = 114511

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 254   agagcaattctctcttcaaat 274
             |||||||||||||||||||||
Sbjct: 18580 agagcaattctctcttcaaat 18560

>dbj|AK067178.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098E20, full
           insert sequence
          Length = 1842

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 355 gtcgcggaggccatggaggtg 375
           |||||||||||||||||||||
Sbjct: 191 gtcgcggaggccatggaggtg 211

>gb|AC101970.11| Mus musculus chromosome 1, clone RP24-267G24, complete sequence
          Length = 167090

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    catgtgcctttccaccaaga 298
              ||||||||||||||||||||
Sbjct: 139360 catgtgcctttccaccaaga 139341

>gb|AC158931.4| Mus musculus chromosome 1, clone RP23-3H19, complete sequence
          Length = 212994

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   catgtgcctttccaccaaga 298
             ||||||||||||||||||||
Sbjct: 31527 catgtgcctttccaccaaga 31508

>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome
          Length = 124321

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     ttcgtatgcatatgcatgca 90
              ||||||||||||||||||||
Sbjct: 104835 ttcgtatgcatatgcatgca 104816

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 71       ttcgtatgcatatgcatgca 90
                ||||||||||||||||||||
Sbjct: 35208218 ttcgtatgcatatgcatgca 35208237

>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete
             sequence
          Length = 82895

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    ttcgtatgcatatgcatgca 90
             ||||||||||||||||||||
Sbjct: 52212 ttcgtatgcatatgcatgca 52231

>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24,
            complete sequence
          Length = 173770

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 71   ttcgtatgcatatgcatgca 90
            ||||||||||||||||||||
Sbjct: 4064 ttcgtatgcatatgcatgca 4083

>emb|AL806534.3| Mouse DNA sequence from clone RP23-334A11 on chromosome X, complete
             sequence
          Length = 130689

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   atcaccaattcaacatatac 148
             ||||||||||||||||||||
Sbjct: 71862 atcaccaattcaacatatac 71843


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,159,658
Number of Sequences: 3902068
Number of extensions: 3159658
Number of successful extensions: 60595
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60519
Number of HSP's gapped (non-prelim): 76
length of query: 379
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 357
effective length of database: 17,147,199,772
effective search space: 6121550318604
effective search space used: 6121550318604
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)