| Clone Name | rbast55e09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009294.1| Triticum aestivum clone wlm1.pk0005.c5:fis, full insert mRNA sequence Length = 919 Score = 567 bits (286), Expect = e-159 Identities = 360/382 (94%), Gaps = 7/382 (1%) Strand = Plus / Plus Query: 1 gttcataacagtagtgttcactggtatccactcaactctagttctatgtagacacataac 60 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 113 gttcataacagtagtgttcaccggtatccactcaactctagttctatgtagacacataac 172 Query: 61 ccatacaattcagtaagccaagaacctgacaagtaaaaggttttgttgtcccttgaacat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 173 ccatacaattcagtaagccaagaacctgacaagtaaaaggttttgttgtcccttgaacat 232 Query: 121 a--gtagcacaaaaagcaggaacgtaggggcatccttcaaatttcatgttgaaaatatca 178 | |||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||| Sbjct: 233 atagtagcacaaaaagcgggaacaaaggggcacccttcaaatttcatgttgaa--tatca 290 Query: 179 acactgcaaagatgtcgacttattcgttggtctgcatcggcgccgcaccctgggcatggt 238 || ||||||||||||||| ||||||| ||||||||||||||| || |||||| ||||||| Sbjct: 291 acgctgcaaagatgtcgatttattcggtggtctgcatcggcgtcgtaccctgtgcatggt 350 Query: 239 acttctccaactcagcatcaagttcttcagcagaccttggctgactacgctctttcccac 298 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 351 acttctccaactcagcatcaagttcttcagcagaccttggctggctacgctctttcccac 410 Query: 299 gacgaccgccagatccactgcctccgccgccgccaccaccacgacccctcccaccccttg 358 ||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| Sbjct: 411 gacgaccgccagatccactgcct---ccgccaccaccacgacgacccctcccaccccttg 467 Query: 359 cacggggcctgttctgtggcaa 380 ||||||| |||||||||||||| Sbjct: 468 cacggggtctgttctgtggcaa 489
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcagaccttggctgactacgctct 291 |||||||| |||||||| |||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 9422861 gcatggtatttctccaagtcagcatcaagttcttcagcagactttggctggctacgctct 9422920 Query: 292 ttcccacgacgaccgccagatccac 316 || ||||| ||||| || ||||||| Sbjct: 9422921 ttgccacggcgaccaccggatccac 9422945 Score = 81.8 bits (41), Expect = 1e-12 Identities = 113/132 (85%), Gaps = 5/132 (3%) Strand = Plus / Plus Query: 13 agtgttcactggtatccactcaactctagttctatgtagacacat-aacccatacaattc 71 ||||||||| | ||||||| |||||||||||||||||||||||| || || |||||||| Sbjct: 9422656 agtgttcaccagcatccacttaactctagttctatgtagacacataaaaccgtacaattc 9422715 Query: 72 agtaagccaagaacctgacaagtaaaaggttttgttgt--cccttgaacatagtagcaca 129 ||||| ||||| ||| ||||| |||||||||||||| || ||||||| |||||||| Sbjct: 9422716 agtaaaccaag-acccgacaa-acaaaggttttgttgttgccactgaacatggtagcaca 9422773 Query: 130 aaaagcaggaac 141 || ||||||||| Sbjct: 9422774 aatagcaggaac 9422785 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Minus Query: 322 ccgccgccgccaccaccacgacc 344 ||||||||||||||||||||||| Sbjct: 27171768 ccgccgccgccaccaccacgacc 27171746 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 22436753 cctccgccgccgccaccaccac 22436774 Score = 44.1 bits (22), Expect = 0.32 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 149 catccttcaaatttcatgttgaaaatatcaacac 182 ||||||||| ||||||||||| |||||||||||| Sbjct: 9422797 catccttcagatttcatgttg-aaatatcaacac 9422829 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 313 ccactgcctccgccgccgccaccac 337 |||| |||||||||||||||||||| Sbjct: 32342210 ccaccgcctccgccgccgccaccac 32342186 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 21020679 ctccgccgccgccaccaccac 21020699 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 cgccgccgccaccaccacgac 343 ||||||||||||||||||||| Sbjct: 17501295 cgccgccgccaccaccacgac 17501315 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccacc 335 |||||||||||||||||||| Sbjct: 27332391 ctgcctccgccgccgccacc 27332410 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 316 ctgcctccgccgccgccaccacca 339 ||||| |||||||||||||||||| Sbjct: 19056170 ctgccgccgccgccgccaccacca 19056147
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcagaccttggctgactacgctct 291 |||||||| |||||||| |||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 120261 gcatggtatttctccaagtcagcatcaagttcttcagcagactttggctggctacgctct 120320 Query: 292 ttcccacgacgaccgccagatccac 316 || ||||| ||||| || ||||||| Sbjct: 120321 ttgccacggcgaccaccggatccac 120345 Score = 81.8 bits (41), Expect = 1e-12 Identities = 113/132 (85%), Gaps = 5/132 (3%) Strand = Plus / Plus Query: 13 agtgttcactggtatccactcaactctagttctatgtagacacat-aacccatacaattc 71 ||||||||| | ||||||| |||||||||||||||||||||||| || || |||||||| Sbjct: 120056 agtgttcaccagcatccacttaactctagttctatgtagacacataaaaccgtacaattc 120115 Query: 72 agtaagccaagaacctgacaagtaaaaggttttgttgt--cccttgaacatagtagcaca 129 ||||| ||||| ||| ||||| |||||||||||||| || ||||||| |||||||| Sbjct: 120116 agtaaaccaag-acccgacaa-acaaaggttttgttgttgccactgaacatggtagcaca 120173 Query: 130 aaaagcaggaac 141 || ||||||||| Sbjct: 120174 aatagcaggaac 120185 Score = 44.1 bits (22), Expect = 0.32 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 149 catccttcaaatttcatgttgaaaatatcaacac 182 ||||||||| ||||||||||| |||||||||||| Sbjct: 120197 catccttcagatttcatgttg-aaatatcaacac 120229
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcagaccttggctgactacgctct 291 |||||||| |||||||| |||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 9420982 gcatggtatttctccaagtcagcatcaagttcttcagcagactttggctggctacgctct 9421041 Query: 292 ttcccacgacgaccgccagatccac 316 || ||||| ||||| || ||||||| Sbjct: 9421042 ttgccacggcgaccaccggatccac 9421066 Score = 81.8 bits (41), Expect = 1e-12 Identities = 113/132 (85%), Gaps = 5/132 (3%) Strand = Plus / Plus Query: 13 agtgttcactggtatccactcaactctagttctatgtagacacat-aacccatacaattc 71 ||||||||| | ||||||| |||||||||||||||||||||||| || || |||||||| Sbjct: 9420777 agtgttcaccagcatccacttaactctagttctatgtagacacataaaaccgtacaattc 9420836 Query: 72 agtaagccaagaacctgacaagtaaaaggttttgttgt--cccttgaacatagtagcaca 129 ||||| ||||| ||| ||||| |||||||||||||| || ||||||| |||||||| Sbjct: 9420837 agtaaaccaag-acccgacaa-acaaaggttttgttgttgccactgaacatggtagcaca 9420894 Query: 130 aaaagcaggaac 141 || ||||||||| Sbjct: 9420895 aatagcaggaac 9420906 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Minus Query: 322 ccgccgccgccaccaccacgacc 344 ||||||||||||||||||||||| Sbjct: 27263091 ccgccgccgccaccaccacgacc 27263069 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 22429782 cctccgccgccgccaccaccac 22429803 Score = 44.1 bits (22), Expect = 0.32 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 149 catccttcaaatttcatgttgaaaatatcaacac 182 ||||||||| ||||||||||| |||||||||||| Sbjct: 9420918 catccttcagatttcatgttg-aaatatcaacac 9420950 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 313 ccactgcctccgccgccgccaccac 337 |||| |||||||||||||||||||| Sbjct: 32432720 ccaccgcctccgccgccgccaccac 32432696 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 21013708 ctccgccgccgccaccaccac 21013728 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 cgccgccgccaccaccacgac 343 ||||||||||||||||||||| Sbjct: 17494836 cgccgccgccaccaccacgac 17494856 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccacc 335 |||||||||||||||||||| Sbjct: 27423714 ctgcctccgccgccgccacc 27423733 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 316 ctgcctccgccgccgccaccacca 339 ||||| |||||||||||||||||| Sbjct: 19050211 ctgccgccgccgccgccaccacca 19050188
>dbj|AK119667.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-D05, full insert sequence Length = 1176 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcagaccttggctgactacgctct 291 |||||||| |||||||| |||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 944 gcatggtatttctccaagtcagcatcaagttcttcagcagactttggctggctacgctct 885 Query: 292 ttcccacgacgaccgccagatccac 316 || ||||| ||||| || ||||||| Sbjct: 884 ttgccacggcgaccaccggatccac 860 Score = 81.8 bits (41), Expect = 1e-12 Identities = 113/132 (85%), Gaps = 5/132 (3%) Strand = Plus / Minus Query: 13 agtgttcactggtatccactcaactctagttctatgtagacacat-aacccatacaattc 71 ||||||||| | ||||||| |||||||||||||||||||||||| || || |||||||| Sbjct: 1149 agtgttcaccagcatccacttaactctagttctatgtagacacataaaaccgtacaattc 1090 Query: 72 agtaagccaagaacctgacaagtaaaaggttttgttgt--cccttgaacatagtagcaca 129 ||||| ||||| ||| ||||| |||||||||||||| || ||||||| |||||||| Sbjct: 1089 agtaaaccaag-acccgacaa-acaaaggttttgttgttgccactgaacatggtagcaca 1032 Query: 130 aaaagcaggaac 141 || ||||||||| Sbjct: 1031 aatagcaggaac 1020 Score = 44.1 bits (22), Expect = 0.32 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 149 catccttcaaatttcatgttgaaaatatcaacac 182 ||||||||| ||||||||||| |||||||||||| Sbjct: 1008 catccttcagatttcatgttg-aaatatcaacac 976
>dbj|AK072759.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140G09, full insert sequence Length = 2139 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcagaccttggctgactacgctct 291 |||||||| |||||||| |||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 618 gcatggtatttctccaagtcagcatcaagttcttcagcagactttggctggctacgctct 559 Query: 292 ttcccacgacgaccgccagatccac 316 || ||||| ||||| || ||||||| Sbjct: 558 ttgccacggcgaccaccggatccac 534 Score = 81.8 bits (41), Expect = 1e-12 Identities = 113/132 (85%), Gaps = 5/132 (3%) Strand = Plus / Minus Query: 13 agtgttcactggtatccactcaactctagttctatgtagacacat-aacccatacaattc 71 ||||||||| | ||||||| |||||||||||||||||||||||| || || |||||||| Sbjct: 823 agtgttcaccagcatccacttaactctagttctatgtagacacataaaaccgtacaattc 764 Query: 72 agtaagccaagaacctgacaagtaaaaggttttgttgt--cccttgaacatagtagcaca 129 ||||| ||||| ||| ||||| |||||||||||||| || ||||||| |||||||| Sbjct: 763 agtaaaccaag-acccgacaa-acaaaggttttgttgttgccactgaacatggtagcaca 706 Query: 130 aaaagcaggaac 141 || ||||||||| Sbjct: 705 aatagcaggaac 694 Score = 44.1 bits (22), Expect = 0.32 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 149 catccttcaaatttcatgttgaaaatatcaacac 182 ||||||||| ||||||||||| |||||||||||| Sbjct: 682 catccttcagatttcatgttg-aaatatcaacac 650
>dbj|AK071965.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013081B11, full insert sequence Length = 1182 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcagaccttggctgactacgctct 291 |||||||| |||||||| |||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 947 gcatggtatttctccaagtcagcatcaagttcttcagcagactttggctggctacgctct 888 Query: 292 ttcccacgacgaccgccagatccac 316 || ||||| ||||| || ||||||| Sbjct: 887 ttgccacggcgaccaccggatccac 863 Score = 81.8 bits (41), Expect = 1e-12 Identities = 113/132 (85%), Gaps = 5/132 (3%) Strand = Plus / Minus Query: 13 agtgttcactggtatccactcaactctagttctatgtagacacat-aacccatacaattc 71 ||||||||| | ||||||| |||||||||||||||||||||||| || || |||||||| Sbjct: 1152 agtgttcaccagcatccacttaactctagttctatgtagacacataaaaccgtacaattc 1093 Query: 72 agtaagccaagaacctgacaagtaaaaggttttgttgt--cccttgaacatagtagcaca 129 ||||| ||||| ||| ||||| |||||||||||||| || ||||||| |||||||| Sbjct: 1092 agtaaaccaag-acccgacaa-acaaaggttttgttgttgccactgaacatggtagcaca 1035 Query: 130 aaaagcaggaac 141 || ||||||||| Sbjct: 1034 aatagcaggaac 1023 Score = 44.1 bits (22), Expect = 0.32 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 149 catccttcaaatttcatgttgaaaatatcaacac 182 ||||||||| ||||||||||| |||||||||||| Sbjct: 1011 catccttcagatttcatgttg-aaatatcaacac 979
>dbj|AK064165.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-H02, full insert sequence Length = 1559 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcagaccttggctgactacgctct 291 |||||||| |||||||| |||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 748 gcatggtatttctccaagtcagcatcaagttcttcagcagactttggctggctacgctct 689 Query: 292 ttcccacgacgaccgccagatccac 316 || ||||| ||||| || ||||||| Sbjct: 688 ttgccacggcgaccaccggatccac 664 Score = 81.8 bits (41), Expect = 1e-12 Identities = 113/132 (85%), Gaps = 5/132 (3%) Strand = Plus / Minus Query: 13 agtgttcactggtatccactcaactctagttctatgtagacacat-aacccatacaattc 71 ||||||||| | ||||||| |||||||||||||||||||||||| || || |||||||| Sbjct: 953 agtgttcaccagcatccacttaactctagttctatgtagacacataaaaccgtacaattc 894 Query: 72 agtaagccaagaacctgacaagtaaaaggttttgttgt--cccttgaacatagtagcaca 129 ||||| ||||| ||| ||||| |||||||||||||| || ||||||| |||||||| Sbjct: 893 agtaaaccaag-acccgacaa-acaaaggttttgttgttgccactgaacatggtagcaca 836 Query: 130 aaaagcaggaac 141 || ||||||||| Sbjct: 835 aatagcaggaac 824 Score = 44.1 bits (22), Expect = 0.32 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 149 catccttcaaatttcatgttgaaaatatcaacac 182 ||||||||| ||||||||||| |||||||||||| Sbjct: 812 catccttcagatttcatgttg-aaatatcaacac 780
>dbj|AK060280.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-B02, full insert sequence Length = 1170 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcagaccttggctgactacgctct 291 |||||||| |||||||| |||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 942 gcatggtatttctccaagtcagcatcaagttcttcagcagactttggctggctacgctct 883 Query: 292 ttcccacgacgaccgccagatccac 316 || ||||| ||||| || ||||||| Sbjct: 882 ttgccacggcgaccaccggatccac 858 Score = 81.8 bits (41), Expect = 1e-12 Identities = 113/132 (85%), Gaps = 5/132 (3%) Strand = Plus / Minus Query: 13 agtgttcactggtatccactcaactctagttctatgtagacacat-aacccatacaattc 71 ||||||||| | ||||||| |||||||||||||||||||||||| || || |||||||| Sbjct: 1147 agtgttcaccagcatccacttaactctagttctatgtagacacataaaaccgtacaattc 1088 Query: 72 agtaagccaagaacctgacaagtaaaaggttttgttgt--cccttgaacatagtagcaca 129 ||||| ||||| ||| ||||| |||||||||||||| || ||||||| |||||||| Sbjct: 1087 agtaaaccaag-acccgacaa-acaaaggttttgttgttgccactgaacatggtagcaca 1030 Query: 130 aaaagcaggaac 141 || ||||||||| Sbjct: 1029 aatagcaggaac 1018 Score = 44.1 bits (22), Expect = 0.32 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 149 catccttcaaatttcatgttgaaaatatcaacac 182 ||||||||| ||||||||||| |||||||||||| Sbjct: 1006 catccttcagatttcatgttg-aaatatcaacac 974
>dbj|AK100762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119I24, full insert sequence Length = 1290 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcagaccttggctgactacgctct 291 |||||||| |||||||| ||||||||||||||||| |||||| ||||||| ||||||||| Sbjct: 940 gcatggtatttctccaagtcagcatcaagttcttcggcagactttggctggctacgctct 881 Query: 292 ttcccacgacgaccgccagatccac 316 || ||||| ||||| || ||||||| Sbjct: 880 ttgccacggcgaccaccggatccac 856 Score = 81.8 bits (41), Expect = 1e-12 Identities = 113/132 (85%), Gaps = 5/132 (3%) Strand = Plus / Minus Query: 13 agtgttcactggtatccactcaactctagttctatgtagacacat-aacccatacaattc 71 ||||||||| | ||||||| |||||||||||||||||||||||| || || |||||||| Sbjct: 1145 agtgttcaccagcatccacttaactctagttctatgtagacacataaaaccgtacaattc 1086 Query: 72 agtaagccaagaacctgacaagtaaaaggttttgttgt--cccttgaacatagtagcaca 129 ||||| ||||| ||| ||||| |||||||||||||| || ||||||| |||||||| Sbjct: 1085 agtaaaccaag-acccgacaa-acaaaggttttgttgttgccactgaacatggtagcaca 1028 Query: 130 aaaagcaggaac 141 || ||||||||| Sbjct: 1027 aatagcaggaac 1016 Score = 44.1 bits (22), Expect = 0.32 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 149 catccttcaaatttcatgttgaaaatatcaacac 182 ||||||||| ||||||||||| |||||||||||| Sbjct: 1004 catccttcagatttcatgttg-aaatatcaacac 972
>gb|AY104617.1| Zea mays PCO146523 mRNA sequence Length = 1085 Score = 60.0 bits (30), Expect = 5e-06 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand = Plus / Minus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcagaccttggctgactacgctct 291 ||||| ||||||||||| |||||||| |||||||||| ||| |||||| || |||||| Sbjct: 882 gcatgatacttctccaaatcagcatcgagttcttcagtcgactttggct-tctgcgctct 824 Query: 292 ttcccacgacgacc 305 || ||||||||||| Sbjct: 823 ttgccacgacgacc 810 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 102 tttgttgtcccttgaacatagtagcaca 129 ||||||||||| ||||||| |||||||| Sbjct: 998 tttgttgtcccctgaacatggtagcaca 971
>gb|BT014097.1| Lycopersicon esculentum clone 133201F, mRNA sequence Length = 1298 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Minus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcaga 272 ||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 790 gcatgatacttctccaattcagcatcaagatcttctgcaga 750
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Minus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcaga 272 ||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 4066 gcatggtacttgtccaagtcagcatccaggtcttcagcaga 4026 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 319 cctccgccgccgccaccacca 339 ||||||||||||||||||||| Sbjct: 16641879 cctccgccgccgccaccacca 16641899 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 4741681 ctccgccgccgccaccaccac 4741701 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccacc 335 |||||||||||||||||||| Sbjct: 6433281 ctgcctccgccgccgccacc 6433300
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Minus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcaga 272 ||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 5688 gcatggtacttgtccaagtcagcatccaggtcttcagcaga 5648 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccac 340 |||||||||||||||||||| Sbjct: 25060335 tccgccgccgccaccaccac 25060316 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccacc 335 |||||||||||||||||||| Sbjct: 16234433 ctgcctccgccgccgccacc 16234452
>ref|XM_341857.2| PREDICTED: Rattus norvegicus U1 small nuclear ribonucleoprotein polypeptide A (predicted) (Snrp70_predicted), mRNA Length = 1685 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 312 tccactgcctccgccgccgccaccaccac 340 ||||| ||||||||||||||||||||||| Sbjct: 1177 tccaccgcctccgccgccgccaccaccac 1149
>dbj|BS000243.1| Pan troglodytes chromosome 22 clone:CH251-388O03, map 22, complete sequences Length = 182350 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||||||||||||||||||||||| Sbjct: 145823 ctgcctccgccgccgccaccaccac 145847
>dbj|AK068452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153E18, full insert sequence Length = 1144 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Minus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcaga 272 ||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 782 gcatggtacttgtccaagtcagcatccaggtcttcagcaga 742
>dbj|AK061492.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B07, full insert sequence Length = 1044 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Minus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcaga 272 ||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 682 gcatggtacttgtccaagtcagcatccaggtcttcagcaga 642
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Minus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcaga 272 ||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 5688 gcatggtacttgtccaagtcagcatccaggtcttcagcaga 5648 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccac 340 |||||||||||||||||||| Sbjct: 25371925 tccgccgccgccaccaccac 25371906 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccacc 335 |||||||||||||||||||| Sbjct: 16324415 ctgcctccgccgccgccacc 16324434
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Minus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcaga 272 ||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 4066 gcatggtacttgtccaagtcagcatccaggtcttcagcaga 4026 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 319 cctccgccgccgccaccacca 339 ||||||||||||||||||||| Sbjct: 16595112 cctccgccgccgccaccacca 16595132 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 4741662 ctccgccgccgccaccaccac 4741682 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccacc 335 |||||||||||||||||||| Sbjct: 6433156 ctgcctccgccgccgccacc 6433175
>emb|BX072548.4|CNS09S4R Oryza sativa chromosome 11, . BAC OSJNBa0029D01 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147503 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Minus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcaga 272 ||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 5688 gcatggtacttgtccaagtcagcatccaggtcttcagcaga 5648
>emb|BX000503.2|CNS08CDT Oryza sativa chromosome 12, . BAC OSJNBb0077A02 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131346 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Minus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcaga 272 ||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 4066 gcatggtacttgtccaagtcagcatccaggtcttcagcaga 4026
>emb|AL671970.9| Mouse DNA sequence from clone RP23-152A20 on chromosome 4, complete sequence Length = 166569 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Plus Query: 313 ccactgcctccgccgccgccaccaccac 340 |||||||||||||| ||||||||||||| Sbjct: 104187 ccactgcctccgccaccgccaccaccac 104214
>gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0019M20, complete sequence Length = 139421 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Minus Query: 318 gcctccgccgccgccaccaccacgaccc 345 ||||||||||||||||||||||| |||| Sbjct: 93016 gcctccgccgccgccaccaccaccaccc 92989
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Minus Query: 318 gcctccgccgccgccaccaccacgaccc 345 ||||||||||||||||||||||| |||| Sbjct: 14913238 gcctccgccgccgccaccaccaccaccc 14913211
>gb|AF289213.1|H010058S09 Mus musculus aspartyl beta-hydroxylase (ASPH) gene, exon 21 Length = 5657 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Minus Query: 313 ccactgcctccgccgccgccaccaccac 340 |||||||||||||| ||||||||||||| Sbjct: 2606 ccactgcctccgccaccgccaccaccac 2579
>dbj|AK111369.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-A03, full insert sequence Length = 587 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Plus Query: 318 gcctccgccgccgccaccaccacgaccc 345 ||||||||||||||||||||||| |||| Sbjct: 26 gcctccgccgccgccaccaccaccaccc 53
>dbj|AK108240.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-G12, full insert sequence Length = 1186 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Plus Query: 318 gcctccgccgccgccaccaccacgaccc 345 ||||||||||||||||||||||| |||| Sbjct: 26 gcctccgccgccgccaccaccaccaccc 53
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Minus Query: 318 gcctccgccgccgccaccaccacgaccc 345 ||||||||||||||||||||||| |||| Sbjct: 14921479 gcctccgccgccgccaccaccaccaccc 14921452
>gb|AC113302.13| Mus musculus chromosome 5, clone RP23-431M7, complete sequence Length = 201427 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Minus Query: 318 gcctccgccgccgccaccaccac 340 ||||||||||||||||||||||| Sbjct: 76862 gcctccgccgccgccaccaccac 76840
>gb|AC102794.8| Mus musculus chromosome 3, clone RP23-235G13, complete sequence Length = 166028 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Plus Query: 318 gcctccgccgccgccaccaccac 340 ||||||||||||||||||||||| Sbjct: 101580 gcctccgccgccgccaccaccac 101602
>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete sequence Length = 150155 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacgacc 344 ||||||||||||||||||||||| Sbjct: 132627 ccgccgccgccaccaccacgacc 132649
>gb|AC068064.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-199I14, complete sequence Length = 152776 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Minus Query: 318 gcctccgccgccgccaccaccac 340 ||||||||||||||||||||||| Sbjct: 95319 gcctccgccgccgccaccaccac 95297
>gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genomic sequence, complete sequence Length = 121849 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacgacc 344 ||||||||||||||||||||||| Sbjct: 7123 ccgccgccgccaccaccacgacc 7145
>gb|AY635179.1| Homo sapiens G protein-coupled receptor 139 (GPR139) mRNA, complete cds Length = 1167 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccaccacc 338 ||||||||||||||||||||||| Sbjct: 2 ctgcctccgccgccgccaccacc 24
>ref|XM_953143.1| Neurospora crassa OR74A hypothetical protein (NCU05925.1) partial mRNA Length = 2139 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacgacc 344 ||||||||||||||||||||||| Sbjct: 532 ccgccgccgccaccaccacgacc 554
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09, complete sequence Length = 167318 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 ctccgccgccgccaccaccacga 342 ||||||||||||||||||||||| Sbjct: 62271 ctccgccgccgccaccaccacga 62293
>ref|XM_325779.1| Neurospora crassa OR74A hypothetical protein (NCU05925.1) partial mRNA Length = 2139 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacgacc 344 ||||||||||||||||||||||| Sbjct: 532 ccgccgccgccaccaccacgacc 554
>gb|AC131669.3| Mus musculus BAC clone RP23-307E9 from chromosome 7, complete sequence Length = 189956 Score = 46.1 bits (23), Expect = 0.082 Identities = 35/39 (89%) Strand = Plus / Minus Query: 313 ccactgcctccgccgccgccaccaccacgacccctccca 351 |||||||| ||||| ||||||||||||| ||||| |||| Sbjct: 54373 ccactgccaccgccaccgccaccaccaccaccccaccca 54335
>gb|AC165944.3| Mus musculus chromosome 3, clone RP24-134A8, complete sequence Length = 175118 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Plus Query: 318 gcctccgccgccgccaccaccac 340 ||||||||||||||||||||||| Sbjct: 78759 gcctccgccgccgccaccaccac 78781
>ref|NM_001002911.2| Homo sapiens G protein-coupled receptor 139 (GPR139), mRNA Length = 1238 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccaccacc 338 ||||||||||||||||||||||| Sbjct: 73 ctgcctccgccgccgccaccacc 95
>ref|XM_390984.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG10808.1) partial mRNA Length = 1584 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Minus Query: 322 ccgccgccgccaccaccacgacc 344 ||||||||||||||||||||||| Sbjct: 1130 ccgccgccgccaccaccacgacc 1108
>gb|AC023713.4| Drosophila melanogaster X BAC RP98-24A2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181178 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Minus Query: 312 tccactgcctccgccgccgccac 334 ||||||||||||||||||||||| Sbjct: 78656 tccactgcctccgccgccgccac 78634
>ref|NM_078523.2| Drosophila melanogaster female sterile (1) homoeotic CG2252-RB, transcript variant B (fs(1)h), mRNA Length = 7790 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Minus Query: 312 tccactgcctccgccgccgccac 334 ||||||||||||||||||||||| Sbjct: 6121 tccactgcctccgccgccgccac 6099
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 ctccgccgccgccaccaccacga 342 ||||||||||||||||||||||| Sbjct: 24462280 ctccgccgccgccaccaccacga 24462302 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 319 cctccgccgccgccaccacca 339 ||||||||||||||||||||| Sbjct: 16620419 cctccgccgccgccaccacca 16620439
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 ctccgccgccgccaccaccacga 342 ||||||||||||||||||||||| Sbjct: 17802317 ctccgccgccgccaccaccacga 17802339 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 ccactgcctccgccgccgccacca 336 |||||||| ||||||||||||||| Sbjct: 17917544 ccactgccgccgccgccgccacca 17917521 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 cctccgccgccgccaccacc 338 |||||||||||||||||||| Sbjct: 4534713 cctccgccgccgccaccacc 4534732
>gb|AC021089.8| Homo sapiens chromosome 16 clone CTD-2264D9, complete sequence Length = 101882 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Minus Query: 316 ctgcctccgccgccgccaccacc 338 ||||||||||||||||||||||| Sbjct: 60205 ctgcctccgccgccgccaccacc 60183
>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1142B04 Length = 161964 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 ctccgccgccgccaccaccacga 342 ||||||||||||||||||||||| Sbjct: 77996 ctccgccgccgccaccaccacga 78018
>gb|AE003442.3| Drosophila melanogaster chromosome X, section 26 of 74 of the complete sequence Length = 316794 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Plus Query: 312 tccactgcctccgccgccgccac 334 ||||||||||||||||||||||| Sbjct: 242299 tccactgcctccgccgccgccac 242321
>gb|M15762.1|DROPENFSA D.melanogaster fs(1)h locus fsh1-pen repeat DNA Length = 150 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Minus Query: 312 tccactgcctccgccgccgccac 334 ||||||||||||||||||||||| Sbjct: 51 tccactgcctccgccgccgccac 29
>gb|M23221.1|DROFSHA D.melanogaster fsh membrane protein, 7.6 kb mRNA, complete cds Length = 7792 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Minus Query: 312 tccactgcctccgccgccgccac 334 ||||||||||||||||||||||| Sbjct: 6146 tccactgcctccgccgccgccac 6124
>gb|AC164981.2| Mus musculus BAC clone RP23-121F5 from chromosome 17, complete sequence Length = 243701 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 97891 cctccgccgccgccaccaccac 97912
>gb|AF287967.1| Homo sapiens homeobox B7 (HOXB7) gene, partial cds; and homeobox B6 (HOXB6), homeobox B5 (HOXB5), homeobox B4 (HOXB4), and homeobox B3 (HOXB3) genes, complete cds Length = 59339 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 ccactgcctccgccgccgccaccacc 338 |||||||||||||||||||| ||||| Sbjct: 56805 ccactgcctccgccgccgccgccacc 56780
>ref|XM_867606.1| PREDICTED: Bos taurus similar to dual specificity phosphatase 8 (LOC615727), mRNA Length = 1311 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 ccactgcctccgccgccgccaccacc 338 |||||||| ||||||||||||||||| Sbjct: 736 ccactgccgccgccgccgccaccacc 761
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 32000 cctccgccgccgccaccaccac 32021
>ref|NM_002146.4| Homo sapiens homeobox B3 (HOXB3), mRNA Length = 3627 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 ccactgcctccgccgccgccaccacc 338 |||||||||||||||||||| ||||| Sbjct: 1355 ccactgcctccgccgccgccgccacc 1330
>gb|AC146113.3| Pan troglodytes BAC clone RP43-5I6 from 7, complete sequence Length = 223155 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 151 tccttcaaatttcatgttgaaa 172 |||||||||||||||||||||| Sbjct: 128695 tccttcaaatttcatgttgaaa 128716
>emb|CR954189.2| Medicago truncatula chromosome 5 clone mte1-73d17, COMPLETE SEQUENCE Length = 110556 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccaccacgacc 344 |||| ||||||||||||||||||||| Sbjct: 8194 cctctgccgccgccaccaccacgacc 8169
>gb|AC015983.7| Homo sapiens BAC clone RP11-560I19 from 7, complete sequence Length = 177476 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 151 tccttcaaatttcatgttgaaa 172 |||||||||||||||||||||| Sbjct: 7430 tccttcaaatttcatgttgaaa 7409
>gb|AC146068.2| Pan troglodytes BAC clone RP43-60N22 from 7, complete sequence Length = 143042 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 151 tccttcaaatttcatgttgaaa 172 |||||||||||||||||||||| Sbjct: 128689 tccttcaaatttcatgttgaaa 128710
>emb|X16667.1|HSHOX2G Human HOX2G mRNA from the Hox2 locus Length = 1935 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 ccactgcctccgccgccgccaccacc 338 |||||||||||||||||||| ||||| Sbjct: 860 ccactgcctccgccgccgccgccacc 835
>ref|NM_001006918.1| Xenopus tropicalis splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor) (sfrs1), mRNA Length = 2055 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 577 cctccgccgccgccaccaccac 556
>emb|AJ401159.1|LFL401159 Lampetra fluviatilis mRNA for keratin type II Lfl-K 1 (keratin gene) Length = 1903 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 315 actgcctccgccgccgccaccaccac 340 |||||| ||||||||||||||||||| Sbjct: 1420 actgccgccgccgccgccaccaccac 1395
>emb|AJ721094.1| Gallus gallus partial mRNA for hypothetical protein, clone 34p17 Length = 592 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 240 cctccgccgccgccaccaccac 219
>gb|AC103702.3| Homo sapiens chromosome 17, clone RP11-357H14, complete sequence Length = 187386 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 ccactgcctccgccgccgccaccacc 338 |||||||||||||||||||| ||||| Sbjct: 138366 ccactgcctccgccgccgccgccacc 138341
>dbj|AK027609.1| Homo sapiens cDNA FLJ14703 fis, clone NT2RP3000512, highly similar to Human HOX2G mRNA from the Hox2 locus Length = 2641 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 ccactgcctccgccgccgccaccacc 338 |||||||||||||||||||| ||||| Sbjct: 1393 ccactgcctccgccgccgccgccacc 1368
>ref|NM_206140.1| Drosophila melanogaster P-element somatic inhibitor CG8912-RC, transcript variant C (Psi), mRNA Length = 3966 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 597 cctccgccgccgccaccaccac 576
>ref|NM_166200.2| Drosophila melanogaster P-element somatic inhibitor CG8912-RA, transcript variant A (Psi), mRNA Length = 3967 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 601 cctccgccgccgccaccaccac 580
>ref|NM_057775.3| Drosophila melanogaster P-element somatic inhibitor CG8912-RB, transcript variant B (Psi), mRNA Length = 3963 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 597 cctccgccgccgccaccaccac 576
>gb|AC099030.1| Drosophila melanogaster, chromosome 2R, region 53F-54X, BAC clone BACR09M08, complete sequence Length = 179283 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 16214 cctccgccgccgccaccaccac 16235
>gb|AC099021.1| Drosophila melanogaster, chromosome 2R, region 53E-54X, BAC clone BACR03E17, complete sequence Length = 160338 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 120863 cctccgccgccgccaccaccac 120884
>gb|BC075558.1| Xenopus tropicalis splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor), mRNA (cDNA clone MGC:89508 IMAGE:6992553), complete cds Length = 2055 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 577 cctccgccgccgccaccaccac 556
>gb|S75666.1| PSI=P element somatic inhibitor {alternatively spliced, clone B-1} [Drosophila, mRNA, 3961 nt] Length = 3961 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 597 cctccgccgccgccaccaccac 576
>gb|S75665.1| PSI {clone M-1} [Drosophila, mRNA, 3882 nt] Length = 3882 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 518 cctccgccgccgccaccaccac 497
>gb|AC009789.21|AC009789 Homo sapiens chromosome 17, clone RP11-361K8, complete sequence Length = 168215 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 ccactgcctccgccgccgccaccacc 338 |||||||||||||||||||| ||||| Sbjct: 142245 ccactgcctccgccgccgccgccacc 142220
>emb|BX934124.1| Gallus gallus finished cDNA, clone ChEST29o12 Length = 937 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 24 cctccgccgccgccaccaccac 3
>ref|XM_341852.2| PREDICTED: Rattus norvegicus similar to KIAA1205 protein (predicted) (LOC361569), mRNA Length = 5083 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 2011 cctccgccgccgccaccaccac 2032
>dbj|AK174023.1| Ciona intestinalis cDNA, clone:ciad020i18, full insert sequence Length = 720 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 375 cctccgccgccgccaccaccac 354
>emb|AL772166.15| Mouse DNA sequence from clone RP23-413I12 on chromosome 2, complete sequence Length = 184547 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 316 ctgcctccgccgccgccaccaccacg 341 ||||| |||||||||||||||||||| Sbjct: 67099 ctgccgccgccgccgccaccaccacg 67074
>gb|AC153492.5| Mus musculus 10 BAC RP23-292N5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195237 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 315 actgcctccgccgccgccaccaccac 340 ||||||||||||||| |||||||||| Sbjct: 62118 actgcctccgccgccaccaccaccac 62143
>gb|U59298.1|HSU59298 Human hox homeobox transcription factor (HOXB3) mRNA, complete cds Length = 3103 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 ccactgcctccgccgccgccaccacc 338 |||||||||||||||||||| ||||| Sbjct: 1946 ccactgcctccgccgccgccgccacc 1921
>gb|AE003805.3| Drosophila melanogaster chromosome 2R, section 45 of 73 of the complete sequence Length = 272948 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 134711 cctccgccgccgccaccaccac 134732
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 315 actgcctccgccgccgccaccaccac 340 |||||| ||||||||||||||||||| Sbjct: 1522136 actgccgccgccgccgccaccaccac 1522111
>gb|AC004641.1|AC004641 Drosophila melanogaster DNA sequence (P1s DS07321 (D175), DS05993 (D241), and DS06306 (D173)), complete sequence Length = 154985 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 89583 cctccgccgccgccaccaccac 89562
>dbj|AP004929.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT06J16, TM0083, complete sequence Length = 120016 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 319 cctccgccgccgccaccaccac 340 |||||||||||||||||||||| Sbjct: 835 cctccgccgccgccaccaccac 856
>emb|AL627072.17| Mouse DNA sequence from clone RP23-432B19 on chromosome 4, complete sequence Length = 208805 Score = 44.1 bits (22), Expect = 0.32 Identities = 34/38 (89%) Strand = Plus / Minus Query: 316 ctgcctccgccgccgccaccaccacgacccctcccacc 353 ||||| ||||||||||||||||||| ||| || ||||| Sbjct: 34058 ctgccgccgccgccgccaccaccaccaccactgccacc 34021
>emb|AL626786.11| Mouse DNA sequence from clone RP23-269L6 on chromosome X, complete sequence Length = 156879 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 315 actgcctccgccgccgccaccaccac 340 |||||| ||||||||||||||||||| Sbjct: 48041 actgccgccgccgccgccaccaccac 48016
>gb|AY796223.1| Weissia controversa isolate 1651 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 773 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 ccgccgccgccaccaccacga 342 ||||||||||||||||||||| Sbjct: 112 ccgccgccgccaccaccacga 92
>ref|XM_549848.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1023 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 312 tccactgcctccgccgccgccaccaccac 340 ||||| |||||||||||||||||| |||| Sbjct: 125 tccaccgcctccgccgccgccaccgccac 153
>ref|NM_190301.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2079 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 84 ctccgccgccgccaccaccac 104
>ref|XM_468748.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1470 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 cgccgccgccaccaccacgac 343 ||||||||||||||||||||| Sbjct: 1130 cgccgccgccaccaccacgac 1110
>ref|XM_525966.1| PREDICTED: Pan troglodytes similar to Homeobox even-skipped homolog protein 2 (EVX-2) (LOC470585), mRNA Length = 2250 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 ccgccgccgccaccaccacgacccc 346 ||||||||||||||||||| ||||| Sbjct: 2093 ccgccgccgccaccaccaccacccc 2069
>gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0032H19 map E30331S, complete sequence Length = 164820 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 cgccgccgccaccaccacgac 343 ||||||||||||||||||||| Sbjct: 62448 cgccgccgccaccaccacgac 62428
>gb|BC083784.1| Rattus norvegicus cDNA clone IMAGE:7096594, partial cds Length = 3386 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||| ||||||||||||||||||| Sbjct: 578 ctgccgccgccgccgccaccaccac 602
>gb|AC008356.6| Drosophila melanogaster clone BACR43K14, complete sequence Length = 162593 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 68444 ctccgccgccgccaccaccac 68424
>gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genomic sequence, complete sequence Length = 167239 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 64599 ctccgccgccgccaccaccac 64579
>gb|AC110261.25| Mus musculus chromosome 1, clone RP23-289I3, complete sequence Length = 213116 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||| ||||||||||||||||||| Sbjct: 111050 ctgccgccgccgccgccaccaccac 111074
>gb|AC069541.5| Homo sapiens chromosome 10 clone RP11-389O2, complete sequence Length = 158568 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ccttcaaatttcatgttgaaa 172 ||||||||||||||||||||| Sbjct: 116754 ccttcaaatttcatgttgaaa 116734
>gb|AC166937.2| Mus musculus BAC clone RP24-121A12 from chromosome 10, complete sequence Length = 183115 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||| ||||||||||||||||||| Sbjct: 97483 ctgccgccgccgccgccaccaccac 97507 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 313 ccactgcctccgccgccgccaccaccac 340 |||||||| |||||||||||||| |||| Sbjct: 40699 ccactgccaccgccgccgccaccgccac 40672
>ref|XM_983044.1| PREDICTED: Mus musculus coiled-coil domain containing 6, transcript variant 4 (Ccdc6), mRNA Length = 5510 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 318 gcctccgccgccgccaccacc 338 ||||||||||||||||||||| Sbjct: 1478 gcctccgccgccgccaccacc 1498
>ref|XM_908442.2| PREDICTED: Mus musculus coiled-coil domain containing 6, transcript variant 5 (Ccdc6), mRNA Length = 5332 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 318 gcctccgccgccgccaccacc 338 ||||||||||||||||||||| Sbjct: 1299 gcctccgccgccgccaccacc 1319
>ref|XM_618775.3| PREDICTED: Mus musculus coiled-coil domain containing 6, transcript variant 1 (Ccdc6), mRNA Length = 5511 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 318 gcctccgccgccgccaccacc 338 ||||||||||||||||||||| Sbjct: 1478 gcctccgccgccgccaccacc 1498
>gb|BC014859.1| Homo sapiens hypothetical protein FLJ10159, mRNA (cDNA clone IMAGE:3875312), with apparent retained intron Length = 3981 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 312 tccactgcctccgccgccgccaccaccac 340 ||||| ||| ||||||||||||||||||| Sbjct: 173 tccaccgccgccgccgccgccaccaccac 201
>ref|XM_752195.1| Ustilago maydis 521 hypothetical protein (UM01141.1) partial mRNA Length = 6588 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccaccaccac 340 |||| |||||||||||||||||||| Sbjct: 4573 ctgcttccgccgccgccaccaccac 4597
>gb|AC132427.4| Mus musculus BAC clone RP23-326N11 from chromosome 18, complete sequence Length = 192806 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||| ||||||||||||||||||| Sbjct: 120096 ctgccgccgccgccgccaccaccac 120120
>ref|XM_814557.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510463.140) partial mRNA Length = 1125 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 312 tccactgcctccgccgccgccacca 336 |||||||||||| |||||||||||| Sbjct: 510 tccactgcctccaccgccgccacca 486
>ref|XM_814558.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510463.150) partial mRNA Length = 939 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 312 tccactgcctccgccgccgccacca 336 |||||||||||| |||||||||||| Sbjct: 453 tccactgcctccaccgccgccacca 429
>gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complete sequence Length = 242112 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 gcctccgccgccgccaccacc 338 ||||||||||||||||||||| Sbjct: 195548 gcctccgccgccgccaccacc 195528
>ref|XM_547074.2| PREDICTED: Canis familiaris similar to SH3-binding domain kinase 1 (LOC489954), mRNA Length = 1254 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||| ||||||||||||||||||| Sbjct: 1195 ctgccgccgccgccgccaccaccac 1219
>gb|AC084386.2| Mus musculus BAC clone RP23-61O2 from 17, complete sequence Length = 209523 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||| ||||||||||||||||||| Sbjct: 151650 ctgccgccgccgccgccaccaccac 151674
>emb|AL450284.6| Human DNA sequence from clone RP11-555L24 on chromosome 1 Contains part of the DISC1 gene for disrupted in schizophrenia 1, complete sequence Length = 66208 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 ccttcaaatttcatgttgaaa 172 ||||||||||||||||||||| Sbjct: 21139 ccttcaaatttcatgttgaaa 21159
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 313 ccactgcctccgccgccgccaccac 337 |||| |||||||||||||||||||| Sbjct: 75977 ccaccgcctccgccgccgccaccac 75953
>gb|BT009970.1| Drosophila melanogaster RE63138 full insert cDNA Length = 5869 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 1352 ctccgccgccgccaccaccac 1332
>gb|AC093711.3| Sus scrofa clone RP44-453O1, complete sequence Length = 178791 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 18598 ctccgccgccgccaccaccac 18578
>emb|AL133282.15| Human DNA sequence from clone RP11-264C15 on chromosome 9q32-34.11 Contains part of the ASTN2 gene for astrotactin2 (KIAA0634) and a novel gene, complete sequence Length = 130526 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccacca 339 ||||||||||||||||||||| Sbjct: 36922 cctccgccgccgccaccacca 36902
>emb|AL121957.15|HSDJ67A8 Human DNA sequence from clone RP1-67A8 on chromosome 6q16.2-21 Contains the 5' end of a novel gene, a novel gene, the 5' end of the C6orf210 gene for chromosome 6 open reading frame 210 and two CpG islands, complete sequence Length = 154918 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 312 tccactgcctccgccgccgccaccaccac 340 ||||| ||| ||||||||||||||||||| Sbjct: 49180 tccaccgccgccgccgccgccaccaccac 49152
>gb|AC091772.5| Homo sapiens chromosome 10 clone RP11-257L6, complete sequence Length = 158559 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 ccttcaaatttcatgttgaaa 172 ||||||||||||||||||||| Sbjct: 41815 ccttcaaatttcatgttgaaa 41835
>emb|X62589.1|DMPUMI D.melanogaster mRNA for pumilio protein Length = 6120 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 805 ctccgccgccgccaccaccac 785
>emb|AL606995.3|OSJN00131 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085H11, complete sequence Length = 132394 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 313 ccactgcctccgccgccgccaccac 337 |||||||| |||||||||||||||| Sbjct: 95169 ccactgccaccgccgccgccaccac 95145
>emb|AL035655.1|SPBC405 S.pombe chromosome II cosmid c405 Length = 14425 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 152 ccttcaaatttcatgttgaaaatat 176 |||||||| |||||||||||||||| Sbjct: 10635 ccttcaaaattcatgttgaaaatat 10659
>emb|AJ296178.1|DLI296178 Drosophila littoralis mRNA for NONA protein Length = 2097 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 705 tccgccgccgccaccaccacg 685
>emb|AJ131899.1|RNO131899 Rattus norvegicus mRNA for Proline Rich Synapse Associated Protein 1/Cortactin binding protein 1 (ProSAP1/CortBP1 gene) Length = 7688 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||||| ||||||||||||||||| Sbjct: 228 ctgcctctgccgccgccaccaccac 252
>emb|AL732401.6| Mouse DNA sequence from clone RP23-405K20 on chromosome 11 Contains part of the Slit3 gene for slit homolog 3 (Drosophila), complete sequence Length = 89624 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||| ||||||||||||||||||| Sbjct: 60925 ctgccaccgccgccgccaccaccac 60949
>gb|AC068780.31| Homo sapiens 12 BAC RP11-163B7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 105836 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 ccttcaaatttcatgttgaaa 172 ||||||||||||||||||||| Sbjct: 25554 ccttcaaatttcatgttgaaa 25574
>ref|NM_205792.1| Bos taurus small conductance potassium channel type 2 (KCNN2), transcript variant 1, mRNA Length = 2105 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||| ||||||||||||||||||| Sbjct: 340 ctgccgccgccgccgccaccaccac 316
>ref|NM_205814.1| Bos taurus small conductance potassium channel type 2 (KCNN2), transcript variant 2, mRNA Length = 2096 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||| ||||||||||||||||||| Sbjct: 340 ctgccgccgccgccgccaccaccac 316
>emb|CR857721.1| Pongo pygmaeus mRNA; cDNA DKFZp469B0435 (from clone DKFZp469B0435) Length = 1524 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacgacccc 346 ||||||||||||||||||| ||||| Sbjct: 702 ccgccgccgccaccaccaccacccc 726
>emb|CR753844.7| Zebrafish DNA sequence from clone DKEY-193H7 in linkage group 5, complete sequence Length = 172761 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 133902 ctccgccgccgccaccaccac 133882
>gb|AC103993.8| Homo sapiens chromosome 8, clone RP11-67H2, complete sequence Length = 147742 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 ccttcaaatttcatgttgaaa 172 ||||||||||||||||||||| Sbjct: 85364 ccttcaaatttcatgttgaaa 85384
>gb|AC026745.8| Homo sapiens chromosome 5 clone RP11-245L6, complete sequence Length = 128963 Score = 42.1 bits (21), Expect = 1.3 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 322 ccgccgccgccaccaccacgacccc-tcccaccccttgcac 361 ||||| ||||||||||||| ||||| |||||||||| |||| Sbjct: 61184 ccgcccccgccaccaccaccaccccttcccacccctggcac 61144
>gb|AY680453.1| Macaca mulatta clone ds2_b02_t7_055 survival of motor neuron 1 (SMN1) mRNA, partial cds Length = 489 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacgacccc 346 ||||||||||||||||||| ||||| Sbjct: 343 ccgccgccgccaccaccaccacccc 367
>gb|AY062180.1| Oryza sativa ovule development aintegumenta-like protein BNM3 (BNM3) gene, complete cds Length = 4024 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 217 ctccgccgccgccaccaccac 237
>ref|NM_169259.1| Drosophila melanogaster pumilio CG9755-RD, transcript variant D (pum), mRNA Length = 6643 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 1330 ctccgccgccgccaccaccac 1310
>ref|NM_169258.1| Drosophila melanogaster pumilio CG9755-RA, transcript variant A (pum), mRNA Length = 6665 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 1352 ctccgccgccgccaccaccac 1332
>ref|NM_136816.1| Drosophila melanogaster CG13214-RA, transcript variant A (CG13214), mRNA Length = 1833 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccacca 339 ||||||||||||||||||||| Sbjct: 1067 cctccgccgccgccaccacca 1047
>gb|L07943.1|DROPUM Drosophila melanogaster pumilio protein (pum) mRNA, complete cds Length = 6833 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 1524 ctccgccgccgccaccaccac 1504
>ref|NM_079561.2| Drosophila melanogaster pumilio CG9755-RC, transcript variant C (pum), mRNA Length = 6809 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 1496 ctccgccgccgccaccaccac 1476
>gb|AY012599.1| Drosophila littoralis no on or off transient A (nonA) gene, exon 2 and partial cds Length = 466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 306 tccgccgccgccaccaccacg 286
>gb|AY012598.1| Drosophila americana americana no on or off transient A (nonA) gene, exon 2 and partial cds Length = 490 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 330 tccgccgccgccaccaccacg 310
>gb|AY012597.1| Drosophila americana texana strain ML97.5 no on or off transient A (nonA) gene, exon 2 and partial cds Length = 505 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 345 tccgccgccgccaccaccacg 325
>gb|AY012596.1| Drosophila lummei no on or off transient A (nonA) gene, exon 2 and partial cds Length = 490 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 330 tccgccgccgccaccaccacg 310
>gb|AY012595.1| Drosophila novamexicana no on or off transient A (nonA) gene, exon 2 and partial cds Length = 499 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 339 tccgccgccgccaccaccacg 319
>dbj|AK157183.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830206D12 product:unclassifiable, full insert sequence Length = 2730 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 tcttcagcagaccttggctga 282 ||||||||||||||||||||| Sbjct: 2109 tcttcagcagaccttggctga 2089
>gb|AC021860.6| Homo sapiens BAC clone RP11-617D20 from 4, complete sequence Length = 148045 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 ccttcaaatttcatgttgaaa 172 ||||||||||||||||||||| Sbjct: 25184 ccttcaaatttcatgttgaaa 25204
>gb|AC018991.10| Homo sapiens, clone RP11-448E20, complete sequence Length = 174049 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ccttcaaatttcatgttgaaa 172 ||||||||||||||||||||| Sbjct: 169397 ccttcaaatttcatgttgaaa 169377
>gb|AC152413.5| Mus musculus BAC clone RP23-431A21 from chromosome 10, complete sequence Length = 195951 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||| ||||||||||||||||||| Sbjct: 37331 ctgccgccgccgccgccaccaccac 37307 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 ccactgcctccgccgccgccaccaccac 340 |||||||| |||||||||||||| |||| Sbjct: 94103 ccactgccaccgccgccgccaccgccac 94130
>dbj|AB178956.1| Macaca fascicularis testis cDNA clone: QtsA-10002, similar to human survival of motor neuron 2, centromeric (SMN2),transcript variant d, mRNA, RefSeq: NM_017411.2 Length = 1164 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacgacccc 346 ||||||||||||||||||| ||||| Sbjct: 655 ccgccgccgccaccaccaccacccc 679
>gb|AC155636.3| Mus musculus BAC clone RP23-345F5 from chromosome 17, complete sequence Length = 223528 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||| ||||||||||||||||||| Sbjct: 196439 ctgccgccgccgccgccaccaccac 196415
>gb|AC155160.4| Mus musculus BAC clone RP24-510B6 from chromosome 17, complete sequence Length = 208376 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||| ||||||||||||||||||| Sbjct: 33155 ctgccgccgccgccgccaccaccac 33131
>gb|AC015866.7|AC015866 Homo sapiens, clone RP11-59A1, complete sequence Length = 150564 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ccttcaaatttcatgttgaaa 172 ||||||||||||||||||||| Sbjct: 130403 ccttcaaatttcatgttgaaa 130383
>gb|BT022850.1| Drosophila melanogaster IP13040 full insert cDNA Length = 1811 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccacca 339 ||||||||||||||||||||| Sbjct: 852 cctccgccgccgccaccacca 832
>ref|XM_392980.2| PREDICTED: Apis mellifera similar to CG14938-PA, isoform A (LOC409470), mRNA Length = 2700 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 acctgacaagtaaaaggtttt 104 ||||||||||||||||||||| Sbjct: 1109 acctgacaagtaaaaggtttt 1089
>gb|AC013423.6|AC013423 Drosophila melanogaster, chromosome 2R, region 47D-47E, BAC clone BACR09B12, complete sequence Length = 170341 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 319 cctccgccgccgccaccacca 339 ||||||||||||||||||||| Sbjct: 139284 cctccgccgccgccaccacca 139304
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 313 ccactgcctccgccgccgccaccac 337 |||||||| |||||||||||||||| Sbjct: 16434603 ccactgccaccgccgccgccaccac 16434579 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 20725828 ccgccgccgccaccaccacg 20725847
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccacca 339 ||||||||||||||||||||| Sbjct: 26106115 cctccgccgccgccaccacca 26106095 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 16545853 ccgccgccgccaccaccacg 16545872 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ctgcctccgccgccgccacc 335 |||||||||||||||||||| Sbjct: 9651685 ctgcctccgccgccgccacc 9651666
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 42182656 ctccgccgccgccaccaccac 42182676 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 39138418 ctccgccgccgccaccaccac 39138398 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacgacccctccc 350 ||||||||||||||||| ||| ||||||| Sbjct: 4215913 ccgccgccgccaccacctcgaaccctccc 4215941 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 312 tccactgcctccgccgccgccaccaccac 340 ||||| |||||||||||||||||| |||| Sbjct: 332565 tccaccgcctccgccgccgccaccgccac 332537 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 35470805 ccgccgccgccaccaccacg 35470824 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 313 ccactgcctccgccgccgccaccaccacgacc 344 |||| |||||| |||||||||||||| ||||| Sbjct: 10153373 ccaccgcctcccccgccgccaccacctcgacc 10153404
>ref|NM_018013.2| Homo sapiens hypothetical protein FLJ10159 (FLJ10159), mRNA Length = 4238 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 312 tccactgcctccgccgccgccaccaccac 340 ||||| ||| ||||||||||||||||||| Sbjct: 173 tccaccgccgccgccgccgccaccaccac 201
>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1294_F06 Length = 121088 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 55854 ctccgccgccgccaccaccac 55874
>gb|AC138331.4| Homo sapiens 12 BAC RP11-781A6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 113301 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 ccttcaaatttcatgttgaaa 172 ||||||||||||||||||||| Sbjct: 33069 ccttcaaatttcatgttgaaa 33089
>ref|NM_001004133.1| Rattus norvegicus SH3/ankyrin domain gene 2 (Shank2), transcript variant 2, mRNA Length = 4636 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||||| ||||||||||||||||| Sbjct: 122 ctgcctctgccgccgccaccaccac 146
>ref|NM_133440.1| Rattus norvegicus SH3/ankyrin domain gene 2 (Shank2), transcript variant 3, mRNA Length = 7688 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||||| ||||||||||||||||| Sbjct: 228 ctgcctctgccgccgccaccaccac 252
>ref|XM_343825.2| PREDICTED: Rattus norvegicus similar to Trim1 alpha (LOC363502), mRNA Length = 2680 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||| ||||||||||||||||||| Sbjct: 243 ctgccgccgccgccgccaccaccac 219
>ref|XM_575942.1| PREDICTED: Rattus norvegicus similar to DNA segment, Chr 4, ERATO Doi 22, expressed (LOC500575), mRNA Length = 1200 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||| ||||||||||||||||||| Sbjct: 512 ctgccgccgccgccgccaccaccac 536
>dbj|AP003313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0035F12 Length = 153439 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 14178 ctccgccgccgccaccaccac 14158
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacgacccctccc 350 ||||||||||||||||| ||| ||||||| Sbjct: 53880 ccgccgccgccaccacctcgaaccctccc 53908
>dbj|AB125201.1| Macaca fascicularis SMN1 mRNA for survival of motor neuron 1, telomeric isoform d, complete cds Length = 1511 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacgacccc 346 ||||||||||||||||||| ||||| Sbjct: 664 ccgccgccgccaccaccaccacccc 688
>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0005A05 Length = 190834 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 312 tccactgcctccgccgccgccaccaccac 340 ||||| |||||||||||||||||| |||| Sbjct: 84403 tccaccgcctccgccgccgccaccgccac 84375
>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J02 Length = 151636 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccacca 339 ||||||||||||||||||||| Sbjct: 85360 cctccgccgccgccaccacca 85340
>emb|AJ609279.1| Cicer arietinum partial mRNA for RNA and export binding protein (rrm gene) Length = 418 Score = 42.1 bits (21), Expect = 1.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 232 gcatggtacttctccaactcagcatcaagttcttcagcaga 272 ||||| ||| |||||| |||||||||||| ||||| ||||| Sbjct: 120 gcatgatacctctccagctcagcatcaagatcttctgcaga 80
>dbj|AB114474.1| Bos taurus SK2 variant2 mRNA for small conductance potassium channel type2 variant2, complete cds Length = 2105 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||| ||||||||||||||||||| Sbjct: 340 ctgccgccgccgccgccaccaccac 316
>dbj|AB114473.1| Bos taurus SK2 mRNA for small conductance potassium channel type2, complete cds Length = 2096 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||| ||||||||||||||||||| Sbjct: 340 ctgccgccgccgccgccaccaccac 316
>dbj|AP005628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_E02 Length = 159669 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 319 cctccgccgccgccaccacca 339 ||||||||||||||||||||| Sbjct: 92243 cctccgccgccgccaccacca 92263
>gb|BT021317.1| Drosophila melanogaster RE10602 full insert cDNA Length = 6820 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 1496 ctccgccgccgccaccaccac 1476
>dbj|AK067369.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104D22, full insert sequence Length = 1208 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 313 ccactgcctccgccgccgccaccac 337 |||| |||||||||||||||||||| Sbjct: 770 ccaccgcctccgccgccgccaccac 794
>dbj|AK061314.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C12, full insert sequence Length = 1022 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 312 tccactgcctccgccgccgccaccaccac 340 ||||| |||||||||||||||||| |||| Sbjct: 125 tccaccgcctccgccgccgccaccgccac 153
>gb|AE003681.5| Drosophila melanogaster chromosome 3R, section 19 of 118 of the complete sequence Length = 306650 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 301453 ctccgccgccgccaccaccac 301473
>gb|AE003826.4| Drosophila melanogaster chromosome 2R, section 24 of 73 of the complete sequence Length = 310108 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 319 cctccgccgccgccaccacca 339 ||||||||||||||||||||| Sbjct: 113578 cctccgccgccgccaccacca 113598
>gb|AC006566.2|AC006566 Homo sapiens chromosome 18, clone hRPK.376_P_6, complete sequence Length = 189199 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 ccttcaaatttcatgttgaaa 172 ||||||||||||||||||||| Sbjct: 145003 ccttcaaatttcatgttgaaa 145023
>dbj|AP000336.2| Homo sapiens genomic DNA, chromosome 21 clone:CMP21-S588, complete sequence Length = 37459 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||||||||||| ||||||||||| Sbjct: 17560 ctgcctccgccgctgccaccaccac 17584
>dbj|AP001760.1| Homo sapiens genomic DNA, chromosome 21q, section 104/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||||||||||| ||||||||||| Sbjct: 103036 ctgcctccgccgctgccaccaccac 103060
>dbj|AP005900.1| Homo sapiens genomic DNA, chromosome 18p clone:RP11-931H21, complete sequence Length = 215253 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ccttcaaatttcatgttgaaa 172 ||||||||||||||||||||| Sbjct: 172168 ccttcaaatttcatgttgaaa 172148
>gb|AC006066.1|AC006066 Drosophila melanogaster, chromosome 2R, region 47D6-47E6, P1 clones DS00724 and DS00284, complete sequence Length = 110338 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 319 cctccgccgccgccaccacca 339 ||||||||||||||||||||| Sbjct: 81810 cctccgccgccgccaccacca 81830
>gb|AF060116.1|AF060116 Rattus norvegicus cortactin-binding protein 1 mRNA, complete cds Length = 4636 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||||| ||||||||||||||||| Sbjct: 122 ctgcctctgccgccgccaccaccac 146
>dbj|AP005355.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1189A8, complete sequence Length = 151101 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 ccttcaaatttcatgttgaaa 172 ||||||||||||||||||||| Sbjct: 97063 ccttcaaatttcatgttgaaa 97083
>gb|AC130103.4| Rattus norvegicus BAC CH230-41L20 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 224716 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||| ||||||||||||||||||| Sbjct: 99066 ctgccgccgccgccgccaccaccac 99042
>emb|AL713948.4|CNS07YPR Oryza sativa chromosome 12, . BAC OJ1008_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129944 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccacca 339 ||||||||||||||||||||| Sbjct: 28887 cctccgccgccgccaccacca 28867
>emb|AL713946.3|CNS07YPP Oryza sativa chromosome 12, . BAC OJ1005_B07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161762 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 105450 ctccgccgccgccaccaccac 105430
>emb|AL928750.3|CNS08CBN Oryza sativa chromosome 12, . BAC OSJNBa0063C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147355 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ctccgccgccgccaccaccac 340 ||||||||||||||||||||| Sbjct: 10446 ctccgccgccgccaccaccac 10426
>gb|AC132435.3| Mus musculus BAC clone RP23-223L12 from 10, complete sequence Length = 198383 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 gcctccgccgccgccaccacc 338 ||||||||||||||||||||| Sbjct: 16158 gcctccgccgccgccaccacc 16138
>emb|AL662804.18| Mouse DNA sequence from clone RP23-341C5 on chromosome 11, complete sequence Length = 223438 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 tcttcagcagaccttggctga 282 ||||||||||||||||||||| Sbjct: 215019 tcttcagcagaccttggctga 214999
>emb|AL845162.9| Mouse DNA sequence from clone RP23-35I8 on chromosome 2, complete sequence Length = 189829 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 cgccgccgccaccaccacgacccct 347 |||||||||||||||||| |||||| Sbjct: 107906 cgccgccgccaccaccaccacccct 107930
>emb|AJ304368.1|DLI304368 Drosophila littoralis partial nonA gene, exon 2, strain Ru3 Length = 469 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 309 tccgccgccgccaccaccacg 289
>emb|AJ304365.1|DLI304365 Drosophila littoralis partial nonA gene, exon 2, strain Ru2 Length = 466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 306 tccgccgccgccaccaccacg 286
>emb|AJ304362.1|DLI304362 Drosophila littoralis partial nonA gene, exon 2, strain Ru1 Length = 469 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 309 tccgccgccgccaccaccacg 289
>emb|AJ304359.1|DLI304359 Drosophila littoralis partial nonA gene, exon 2, strain Ala1 Length = 466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 306 tccgccgccgccaccaccacg 286
>emb|AJ304356.1|DLI304356 Drosophila littoralis partial nonA gene, exon 2, strain Sa6 Length = 466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 306 tccgccgccgccaccaccacg 286
>emb|AJ304353.1|DLI304353 Drosophila littoralis partial nonA gene, exon 2, strain Sa5 Length = 466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 306 tccgccgccgccaccaccacg 286
>emb|AJ304350.1|DLI304350 Drosophila littoralis partial nonA gene, exon 2, strain Sa4 Length = 472 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 312 tccgccgccgccaccaccacg 292
>emb|AJ304347.1|DLI304347 Drosophila littoralis partial nonA gene, exon 2, strain Sa3 Length = 469 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 309 tccgccgccgccaccaccacg 289
>emb|AJ304344.1|DLI304344 Drosophila littoralis partial nonA gene, exon 2, strain Sa2 Length = 466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 306 tccgccgccgccaccaccacg 286
>emb|AJ304341.1|DLI304341 Drosophila littoralis partial nonA gene, exon 2, strain Sa1 Length = 466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 306 tccgccgccgccaccaccacg 286
>emb|AJ304338.1|DLI304338 Drosophila littoralis partial nonA gene, exon 2, strain Ku6 Length = 466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 306 tccgccgccgccaccaccacg 286
>emb|AJ304335.1|DLI304335 Drosophila littoralis partial nonA gene, exon 2, strain Ku5 Length = 466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 306 tccgccgccgccaccaccacg 286
>emb|AJ304332.1|DLI304332 Drosophila littoralis partial nonA gene, exon 2, strain Ku4 Length = 466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 306 tccgccgccgccaccaccacg 286
>emb|AJ304329.1|DLI304329 Drosophila littoralis partial nonA gene, exon 2, strain Ku3 Length = 466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 306 tccgccgccgccaccaccacg 286
>emb|AJ304326.1|DLI304326 Drosophila littoralis partial nonA gene, exon 2, strain Ku2 Length = 466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 306 tccgccgccgccaccaccacg 286
>emb|AJ304323.1|DLI304323 Drosophila littoralis partial nonA gene, exon 2, strain Ku1 Length = 466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 306 tccgccgccgccaccaccacg 286
>emb|AJ304320.1|DLI304320 Drosophila littoralis partial nonA gene, exon 2, strain Ou6 Length = 466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 306 tccgccgccgccaccaccacg 286
>emb|AJ304317.1|DLI304317 Drosophila littoralis partial nonA gene, exon 2, strain Ou5 Length = 466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 306 tccgccgccgccaccaccacg 286
>emb|AJ304314.1|DLI304314 Drosophila littoralis partial nonA gene, exon 2, strain Ou4 Length = 469 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 309 tccgccgccgccaccaccacg 289
>emb|AJ304311.1|DLI304311 Drosophila littoralis partial nonA gene, exon 2, strain Ou3 Length = 466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 306 tccgccgccgccaccaccacg 286
>emb|AJ304308.1|DLI304308 Drosophila littoralis partial nonA gene, exon 2, strain Ou2 Length = 466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 306 tccgccgccgccaccaccacg 286
>emb|AJ304305.1|DLI304305 Drosophila littoralis partial nonA gene, exon 2, strain Ou1 Length = 466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tccgccgccgccaccaccacg 341 ||||||||||||||||||||| Sbjct: 306 tccgccgccgccaccaccacg 286
>dbj|AP000215.1| Homo sapiens genomic DNA, chromosome 21q22.3-ter, Ter region, clone f27E1-T1136, segment 1/4, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccaccaccac 340 ||||||||||||| ||||||||||| Sbjct: 43577 ctgcctccgccgctgccaccaccac 43601
>ref|NM_105066.1| Arabidopsis thaliana unknown protein AT1G63930 mRNA, complete cds Length = 1248 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccacc 338 |||||||||||||||||||| Sbjct: 581 cctccgccgccgccaccacc 562
>ref|NM_125743.2| Arabidopsis thaliana unknown protein AT5G63480 mRNA, complete cds Length = 1018 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 312 tccactgcctccgccgccgccaccacca 339 |||||| |||||||| |||||||||||| Sbjct: 340 tccacttcctccgcccccgccaccacca 313
>ref|NM_103725.2| Arabidopsis thaliana unknown protein AT1G48280 mRNA, complete cds Length = 1949 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 ccactgcctccgccgccgccaccaccac 340 |||| |||||||||||| |||||||||| Sbjct: 889 ccaccgcctccgccgccaccaccaccac 916
>ref|NM_122216.3| Arabidopsis thaliana unknown protein AT5G23100 mRNA, complete cds Length = 1326 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cctccgccgccgccaccacc 338 |||||||||||||||||||| Sbjct: 830 cctccgccgccgccaccacc 811
>gb|AC165229.7| Mus musculus chromosome 1, clone RP23-47K10, complete sequence Length = 218929 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 313 ccactgcctccgccgccgccaccaccac 340 |||| ||| ||||||||||||||||||| Sbjct: 196566 ccaccgccaccgccgccgccaccaccac 196539
>ref|XM_472449.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1299 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 344 ccgccgccgccaccaccacg 325
>ref|XM_468898.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3165 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 316 ctgcctccgccgccgccaccacca 339 ||||| |||||||||||||||||| Sbjct: 107 ctgccgccgccgccgccaccacca 84
>ref|XM_467295.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1254 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 tgcctccgccgccgccaccaccac 340 |||||||||| ||||||||||||| Sbjct: 283 tgcctccgccaccgccaccaccac 260
>gb|DQ213208.1| Taeniopygia guttata clone 0058P0060H09 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 7 14-like mRNA, complete sequence Length = 491 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 195 ccgccgccgccaccaccacg 176
>ref|NM_001012227.1| Rattus norvegicus XK-related protein 1 (LOC497078), mRNA Length = 2856 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 ccactgcctccgccgccgccaccaccac 340 |||||||| ||||||||||| ||||||| Sbjct: 34 ccactgccgccgccgccgccgccaccac 61
>ref|NM_190428.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 999 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 118 ccgccgccgccaccaccacg 137
>gb|BC107559.1| Rattus norvegicus XK-related protein 1, mRNA (cDNA clone MGC:124512 IMAGE:7933294), complete cds Length = 3677 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 ccactgcctccgccgccgccaccaccac 340 |||||||| ||||||||||| ||||||| Sbjct: 138 ccactgccgccgccgccgccgccaccac 165
>ref|NM_010135.1| Mus musculus enabled homolog (Drosophila) (Enah), mRNA Length = 2899 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 ccactgcctccgccgccgccaccaccac 340 |||| ||| ||||||||||||||||||| Sbjct: 1475 ccaccgccaccgccgccgccaccaccac 1502
>gb|AC114012.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0079H11, complete sequence Length = 143925 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccacc 335 |||||||||||||||||||| Sbjct: 99288 ctgcctccgccgccgccacc 99307
>gb|U90355.1|MMU90355 Mus musculus fascin (Fscn1) gene, complete cds Length = 16640 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 tgcctccgccgccgccaccaccac 340 |||| ||||||||||||||||||| Sbjct: 14084 tgccgccgccgccgccaccaccac 14061
>gb|AC124227.21| Mus musculus chromosome 1, clone RP23-118M13, complete sequence Length = 220762 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 ccactgcctccgccgccgccaccaccac 340 |||||||| ||||||||||| ||||||| Sbjct: 217363 ccactgccgccgccgccgccgccaccac 217390
>gb|AC010707.17| Drosophila melanogaster clone BACR06P10, complete sequence Length = 176969 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 tgcctccgccgccgccaccaccac 340 |||| ||||||||||||||||||| Sbjct: 133865 tgccaccgccgccgccaccaccac 133842
>gb|AC010846.13| Drosophila melanogaster clone BACR13G13, complete sequence Length = 192540 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 tgcctccgccgccgccaccaccac 340 |||| ||||||||||||||||||| Sbjct: 36429 tgccaccgccgccgccaccaccac 36406
>ref|XM_365195.1| Magnaporthe grisea 70-15 hypothetical protein (MG10040.4) partial mRNA Length = 1023 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 313 ccactgcctccgccgccgccaccaccac 340 |||| ||| ||||||||||||||||||| Sbjct: 896 ccaccgccgccgccgccgccaccaccac 869
>ref|XM_879394.1| PREDICTED: Bos taurus similar to protein kinase C binding protein 1 isoform a, transcript variant 17 (LOC506031), mRNA Length = 5135 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 2420 ccgccgccgccaccaccacg 2439
>ref|XM_879366.1| PREDICTED: Bos taurus similar to protein kinase C binding protein 1 isoform a, transcript variant 16 (LOC506031), mRNA Length = 5271 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 2415 ccgccgccgccaccaccacg 2434
>ref|XM_866938.1| PREDICTED: Bos taurus similar to protein kinase C binding protein 1 isoform a, transcript variant 2 (LOC506031), mRNA Length = 5349 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 2493 ccgccgccgccaccaccacg 2512
>ref|XM_879268.1| PREDICTED: Bos taurus similar to protein kinase C binding protein 1 isoform a, transcript variant 14 (LOC506031), mRNA Length = 5124 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 2493 ccgccgccgccaccaccacg 2512
>ref|XM_879239.1| PREDICTED: Bos taurus similar to protein kinase C binding protein 1 isoform a, transcript variant 13 (LOC506031), mRNA Length = 5496 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 2640 ccgccgccgccaccaccacg 2659
>ref|XM_879215.1| PREDICTED: Bos taurus similar to protein kinase C binding protein 1 isoform a, transcript variant 12 (LOC506031), mRNA Length = 5265 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 2493 ccgccgccgccaccaccacg 2512
>ref|XM_879190.1| PREDICTED: Bos taurus similar to protein kinase C binding protein 1 isoform a, transcript variant 11 (LOC506031), mRNA Length = 5587 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 2731 ccgccgccgccaccaccacg 2750
>ref|XM_879169.1| PREDICTED: Bos taurus similar to protein kinase C binding protein 1 isoform a, transcript variant 10 (LOC506031), mRNA Length = 5375 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 2660 ccgccgccgccaccaccacg 2679
>ref|XM_879142.1| PREDICTED: Bos taurus similar to protein kinase C binding protein 1 isoform a, transcript variant 9 (LOC506031), mRNA Length = 5127 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 2496 ccgccgccgccaccaccacg 2515
>ref|XM_879114.1| PREDICTED: Bos taurus similar to protein kinase C binding protein 1 isoform a, transcript variant 8 (LOC506031), mRNA Length = 5055 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 2199 ccgccgccgccaccaccacg 2218
>ref|XM_879087.1| PREDICTED: Bos taurus similar to protein kinase C binding protein 1 isoform a, transcript variant 7 (LOC506031), mRNA Length = 4990 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 2275 ccgccgccgccaccaccacg 2294
>ref|XM_582421.2| PREDICTED: Bos taurus similar to protein kinase C binding protein 1 isoform a, transcript variant 1 (LOC506031), mRNA Length = 2964 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 299 ccgccgccgccaccaccacg 318
>ref|XM_879021.1| PREDICTED: Bos taurus similar to protein kinase C binding protein 1 isoform a, transcript variant 6 (LOC506031), mRNA Length = 5046 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 2415 ccgccgccgccaccaccacg 2434
>ref|XM_878940.1| PREDICTED: Bos taurus similar to protein kinase C binding protein 1 isoform a, transcript variant 3 (LOC506031), mRNA Length = 5210 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgccgccgccaccaccacg 341 |||||||||||||||||||| Sbjct: 2495 ccgccgccgccaccaccacg 2514
>ref|XM_415500.1| PREDICTED: Gallus gallus similar to Cip1-interacting zinc finger protein; CDKN1A-interacting zinc finger protein 1; zinc finger protein 356; nuclear protein NP94 (LOC417216), mRNA Length = 2236 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 317 tgcctccgccgccgccaccaccac 340 |||| ||||||||||||||||||| Sbjct: 32 tgccgccgccgccgccaccaccac 55
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 cctccgccgccgccaccacc 338 |||||||||||||||||||| Sbjct: 45180 cctccgccgccgccaccacc 45199
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctgcctccgccgccgccacc 335 |||||||||||||||||||| Sbjct: 32598 ctgcctccgccgccgccacc 32617 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,014,550 Number of Sequences: 3902068 Number of extensions: 4014550 Number of successful extensions: 119875 Number of sequences better than 10.0: 435 Number of HSP's better than 10.0 without gapping: 462 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 113641 Number of HSP's gapped (non-prelim): 6105 length of query: 380 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 358 effective length of database: 17,147,199,772 effective search space: 6138697518376 effective search space used: 6138697518376 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)