| Clone Name | rbast55c07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2) | 29 | 4.1 | 2 | MRGA2_MOUSE (Q91WW4) Mas-related G-protein coupled receptor memb... | 28 | 7.1 | 3 | YFB2_YEAST (P43580) Hypothetical 17.2 kDa protein in HSP12-HXT10... | 28 | 7.1 | 4 | CT012_MOUSE (Q8C008) Protein C20orf12 homolog | 28 | 7.1 | 5 | FBXW9_HUMAN (Q5XUX1) F-box/WD-repeat protein 9 (F-box and WD-40 ... | 28 | 9.2 |
|---|
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 29.3 bits (64), Expect = 4.1 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = -3 Query: 143 CISYILLNFNSSLCGSKPSLCSIVFHVCNIMI 48 C + + N+SLC KPS+C + F V + M+ Sbjct: 4879 CCNITVCKCNTSLCKEKPSVCPLGFEVKSKMV 4910
>MRGA2_MOUSE (Q91WW4) Mas-related G-protein coupled receptor member A2| Length = 305 Score = 28.5 bits (62), Expect = 7.1 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 4/71 (5%) Frame = -3 Query: 227 GFGGNNLQLWCYEAHHCIFTHSIFFDMNCISYILLNFNSSLCGS----KPSLCSIVFHVC 60 G GN + W H S++ ++ L +S + + K S SI+FH+C Sbjct: 27 GLMGNAIVFWLLGFHLRRNAFSVYILNLALADFLFLLSSIIASTLFLLKVSYLSIIFHLC 86 Query: 59 NIMILLICYMT 27 I+++ Y+T Sbjct: 87 FNTIMMVVYIT 97
>YFB2_YEAST (P43580) Hypothetical 17.2 kDa protein in HSP12-HXT10 intergenic| region Length = 148 Score = 28.5 bits (62), Expect = 7.1 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +1 Query: 319 LVSHFVQSMNHTPGKTIPRVNLQNKTQILSPKPI 420 LVSH V +NH+P T QN ++ +P+ Sbjct: 34 LVSHIVIEINHSPTATTDETRKQNNPELKVKEPV 67
>CT012_MOUSE (Q8C008) Protein C20orf12 homolog| Length = 778 Score = 28.5 bits (62), Expect = 7.1 Identities = 13/37 (35%), Positives = 25/37 (67%) Frame = +1 Query: 310 QASLVSHFVQSMNHTPGKTIPRVNLQNKTQILSPKPI 420 ++SLVS + QS++ TP NL+ K+ +++P+P+ Sbjct: 592 RSSLVSAYSQSVSDTPESIKKMKNLKAKSFLVNPEPL 628
>FBXW9_HUMAN (Q5XUX1) F-box/WD-repeat protein 9 (F-box and WD-40 domain protein| 9) Length = 478 Score = 28.1 bits (61), Expect = 9.2 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +3 Query: 327 PFCSIDESYSWQDDSQGQSSEQNADPQPQAYIS 425 P D+S +W DDS + SE + D Q +AY++ Sbjct: 4 PLGRCDDSRTWDDDSDPE-SETDPDAQAKAYVA 35 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,966,227 Number of Sequences: 219361 Number of extensions: 1174520 Number of successful extensions: 2391 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2352 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2389 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)