| Clone Name | rbast55b04 |
|---|---|
| Clone Library Name | barley_pub |
>ARNT_HUMAN (P27540) Aryl hydrocarbon receptor nuclear translocator (ARNT| protein) (Dioxin receptor, nuclear translocator) (Hypoxia-inducible factor 1 beta) (HIF-1 beta) Length = 789 Score = 33.5 bits (75), Expect = 0.20 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = -3 Query: 383 SPSVTASPSWLPTSASGYSATRIAXXXXPKASKE*TGVQYYE 258 +P+ A+P+W PT+ SG+SA ++A K GV ++ Sbjct: 630 NPTQGATPTWTPTTRSGFSAQQVATQATAKTRTSQFGVGSFQ 671
>TAGB_DICDI (P54683) Prestalk-specific protein tagB precursor (EC 3.4.21.-)| Length = 1905 Score = 30.4 bits (67), Expect = 1.7 Identities = 17/53 (32%), Positives = 28/53 (52%) Frame = +2 Query: 98 IAETDGKGDNKKE*HYTNNQGNFSSSKTLDNYVAIALSVGGLTKKKARSRPPK 256 + ++GK D+ + NN GN S+ LD +A S GLTK++ + + K Sbjct: 1434 VENSNGKQDDPN--NNNNNIGNLDYSEQLDGVSTVADSTVGLTKRELKKQKEK 1484
>FZO1_CAEEL (Q23424) Transmembrane GTPase fzo-1 (EC 3.6.5.-)| Length = 774 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 Query: 44 KELEDPDLYIQQSNWDVRIAETDGKGDNKKE 136 K+L P+++I + WD AET+ D KK+ Sbjct: 258 KKLSKPNVFILNNRWDASAAETENIEDVKKQ 288
>CORIN_MOUSE (Q9Z319) Atrial natriuteric peptide-converting enzyme (EC 3.4.21.-)| (pro-ANP-converting enzyme) (Corin) (Low density lipoprotein receptor-related protein 4) Length = 1113 Score = 29.6 bits (65), Expect = 2.9 Identities = 19/93 (20%), Positives = 39/93 (41%) Frame = -3 Query: 395 GSPRSPSVTASPSWLPTSASGYSATRIAXXXXPKASKE*TGVQYYEILVACF*LSSWLIP 216 G+P P ++P+W P + S + + + Y +A L+P Sbjct: 175 GAPSLPPSQSTPAWTPRAPSPEDQSHRNTSTCMNITHSQCQILPYHSTLAP------LLP 228 Query: 215 LLTELWPRSCREFYYY*NYLGCWCNVILFCCRL 117 ++ + +F+ Y + L C+ +++LF C L Sbjct: 229 IVKNMDMEKFLKFFTYLHRLSCYQHILLFGCSL 261
>ARNT_RABIT (O02748) Aryl hydrocarbon receptor nuclear translocator (ARNT| protein) (Dioxin receptor, nuclear translocator) (Hypoxia-inducible factor 1 beta) (HIF-1 beta) Length = 790 Score = 29.3 bits (64), Expect = 3.7 Identities = 11/42 (26%), Positives = 23/42 (54%) Frame = -3 Query: 383 SPSVTASPSWLPTSASGYSATRIAXXXXPKASKE*TGVQYYE 258 +P+ +P+W P++ G+SA ++A K+ GV ++ Sbjct: 631 NPTQGTAPTWTPSTRPGFSAQQVASQATTKSRSSQFGVGNFQ 672
>FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) Length = 347 Score = 28.1 bits (61), Expect = 8.3 Identities = 9/12 (75%), Positives = 12/12 (100%) Frame = -2 Query: 399 GWEPKIALRDGL 364 GWEP++ALRDG+ Sbjct: 317 GWEPRVALRDGI 328 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,908,839 Number of Sequences: 219361 Number of extensions: 841870 Number of successful extensions: 2348 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2316 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2347 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)