ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast52b05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DBNBT_TAXCA (Q8LL69) 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltrans... 36 0.038
2T5AT_TAXCH (Q8S9G6) Taxadien-5-alpha-ol O-acetyltransferase (EC ... 33 0.42
3T5AT_TAXCU (Q9M6F0) Taxadien-5-alpha-ol O-acetyltransferase (EC ... 32 0.93
4DEOB_BUCBP (Q89A57) Phosphopentomutase (EC 5.4.2.7) (Phosphodeox... 30 2.7
5SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3... 30 3.5
6DBAT_TAXCU (Q9M6E2) 10-deacetylbaccatin III 10-O-acetyltransfera... 29 4.6
7PT127_YEAST (P32606) Putative mitochondrial translation system c... 29 4.6
8TRPB2_METMA (Q8Q001) Tryptophan synthase beta chain 2 (EC 4.2.1.20) 28 7.9

>DBNBT_TAXCA (Q8LL69) 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase (EC|
           2.3.1.-) (DBTNBT)
          Length = 441

 Score = 36.2 bits (82), Expect = 0.038
 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
 Frame = -3

Query: 444 WSRVGFNEVDYGFGEPGYVFT---LNDDVNIVASVIYLKPPAPKR-GIRLMLRCV 292
           W R+GF E D+G+G P  V +   L + + + ++ +YL P   K  GI+L+L C+
Sbjct: 364 WRRLGFYEADFGWGGPLNVSSLQRLENGLPMFSTFLYLLPAKNKSDGIKLLLSCM 418



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>T5AT_TAXCH (Q8S9G6) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)|
           (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase)
           (Taxadienol acetyltransferase)
          Length = 439

 Score = 32.7 bits (73), Expect = 0.42
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = -3

Query: 444 WSRVGFNEVDYGFGEPGYVFTLNDDVNIVAS--VIYLKPPAPK-RGIRLML 301
           WSR+GF+EVD+G+G    V  +     +      ++LKP   K  GI++++
Sbjct: 364 WSRLGFDEVDFGWGNAVSVSPVQQQCELAMQNYFLFLKPSKNKPDGIKILM 414



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>T5AT_TAXCU (Q9M6F0) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)|
           (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase)
           (Taxadienol acetyltransferase)
          Length = 439

 Score = 31.6 bits (70), Expect = 0.93
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = -3

Query: 444 WSRVGFNEVDYGFGEPGYVFTLNDDVNIVAS--VIYLKPPAPK-RGIRLML 301
           WSR+GF+EVD+G+G    V  +     +      ++LKP   K  GI++++
Sbjct: 364 WSRLGFDEVDFGWGNAVSVSPVQQQSALAMQNYFLFLKPSKNKPDGIKILM 414



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>DEOB_BUCBP (Q89A57) Phosphopentomutase (EC 5.4.2.7) (Phosphodeoxyribomutase)|
          Length = 408

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +1

Query: 241 LSVLGKLVGEHSRVWLLHATEHQSDPTLGCRWLEVDHRRDNVDIVV 378
           L  L KLV  H+   L+   +H  DPT    W+  DH R+NV I++
Sbjct: 330 LPKLLKLV--HNEDLLIITADHGCDPT----WIGTDHTRENVPILI 369



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>SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3.1.150) (salAT)|
          Length = 474

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 17/66 (25%), Positives = 34/66 (51%)
 Frame = -3

Query: 444 WSRVGFNEVDYGFGEPGYVFTLNDDVNIVASVIYLKPPAPKRGIRLMLRCVEEPHAAVFA 265
           W R+G  E+D+G+G+P +V T++ ++    +  ++       GI        E  A+   
Sbjct: 407 WCRMGLYEIDFGWGKPIWV-TVDPNIKPNKNCFFMNDTKCGEGI--------EVWASFLE 457

Query: 264 DELAKY 247
           D++AK+
Sbjct: 458 DDMAKF 463



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>DBAT_TAXCU (Q9M6E2) 10-deacetylbaccatin III 10-O-acetyltransferase (EC|
           2.3.1.167) (DBAT)
          Length = 440

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
 Frame = -3

Query: 438 RVGFNEVDYGFGEPGYVFTLN---DDVNIVAS-VIYLKPP 331
           R+GF+EVD+G+G    V  +     DV++V S  ++++PP
Sbjct: 365 RLGFDEVDFGWGHADNVSLVQHGLKDVSVVQSYFLFIRPP 404



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>PT127_YEAST (P32606) Putative mitochondrial translation system component PET127|
          Length = 800

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 171 KSTVRRCYRHENMHSATAKKQYPAKRTWQARRRTQPRVAPPRNGASVGSHAW 326
           K+ +++ YRH+     T    YP +RT+  RR    R   P +     S+++
Sbjct: 99  KTNIKKEYRHDKYLERTKVGTYPGRRTYPGRRTYPARRTYPASRTYSDSNSY 150



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>TRPB2_METMA (Q8Q001) Tryptophan synthase beta chain 2 (EC 4.2.1.20)|
          Length = 442

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -3

Query: 237 DTASWPWPSACSHACNTFSLYFFFTLVCNVFI*RSHY 127
           +T +  W SA S ACN      +F L C V++ RS Y
Sbjct: 144 ETGAGQWGSALSLACN------YFDLECKVYMVRSSY 174


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,903,183
Number of Sequences: 219361
Number of extensions: 1282192
Number of successful extensions: 2969
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2967
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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