ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast50g08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y825_PASMU (Q9CMJ9) UPF0227 protein PM0825 30 1.4
2O51V1_HUMAN (Q9H2C8) Olfactory receptor 51V1 (Odorant receptor H... 29 3.0
3SC7_SCHCO (P35794) Fruiting body protein SC7 precursor 28 4.0
4PK1_NPVHZ (P41719) Serine/threonine-protein kinase 1 (EC 2.7.11.1) 28 4.0
5LPPB_HAESO (P36685) Outer membrane antigenic lipoprotein B precu... 27 8.9

>Y825_PASMU (Q9CMJ9) UPF0227 protein PM0825|
          Length = 179

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +2

Query: 290 HDSSFVLHGVHYLVAASLNPPPAAAIVGYG 379
           HD  F+L+ VH LV+ S +P P    VG G
Sbjct: 41  HDMQFLLNEVHKLVSESKDPAPLICGVGLG 70



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>O51V1_HUMAN (Q9H2C8) Olfactory receptor 51V1 (Odorant receptor HOR3'beta1)|
           (Olfactory receptor OR11-36)
          Length = 321

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 20/48 (41%), Positives = 23/48 (47%)
 Frame = -1

Query: 166 ICMRIIGESFQFLKKHKISVPLIIFSLCHSSSAGHSFNLLSGDLRSAC 23
           I + IIG SF F+    I   L  F+ CH     HSF L    LR AC
Sbjct: 153 IGLTIIGRSFFFITPPIIC--LKFFNYCHFHILSHSFCLHQDLLRLAC 198



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>SC7_SCHCO (P35794) Fruiting body protein SC7 precursor|
          Length = 204

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +2

Query: 158 HADEP--TTAQYSAASHWDWVDFPQSGSATCTAHS 256
           +A+EP   T  YS A HW  V +  + S  C A+S
Sbjct: 127 NAEEPDYNTTTYSGAGHWTQVVWKSTTSVGCAAYS 161



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>PK1_NPVHZ (P41719) Serine/threonine-protein kinase 1 (EC 2.7.11.1)|
          Length = 267

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
 Frame = -1

Query: 148 GESFQFLKKHK----ISVPLIIFSLCHSSSAGHSFNLLSGDLR 32
           G+ F FLKKHK         I+  L  + +A HS+ ++  DL+
Sbjct: 94  GDLFDFLKKHKKVSEAETRSIVGQLTEALNALHSYKIIHNDLK 136



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>LPPB_HAESO (P36685) Outer membrane antigenic lipoprotein B precursor|
           (Fragment)
          Length = 337

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +2

Query: 89  TENNQWHRNLVFFEKLKRLAYNTHADEPTTAQYSAASHWDWVDFPQSG 232
           T N  W+ N    E++K +A  TH+  P      A S+  W+ +P +G
Sbjct: 186 TVNETWNANKPTNEQMKPVATPTHSTMPINKTPPATSNIAWI-WPTNG 232


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,000,507
Number of Sequences: 219361
Number of extensions: 1067997
Number of successful extensions: 3127
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3127
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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