>SYFA_NITMU (Q2YBS2) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 344

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 149 PQAHEVTRMSNTFQVKEENNNLSPAYRRQHTVP 247
           P++H    M +TF V +EN   S    R HT P
Sbjct: 146 PESHPARAMHDTFYVDDENGGASEHLLRTHTSP 178

>SRP1_SCHPO (Q10193) Pre-mRNA-splicing factor srp1|
          Length = 275

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +2

Query: 128 GTARVRRPQAHEVTRMSNTFQVKEENNNLSPAYRRQHTVPSGK 256
           G  R R P  HE    S     + +  ++SP YR +   P G+
Sbjct: 111 GRLRSRSPSPHEARSRSPYNDERSDRRSMSPRYRSRSRSPDGR 153

>TYCB_BREPA (O30408) Tyrocidine synthetase 2 (Tyrocidine synthetase II)|
            [Includes: ATP-dependent proline adenylase (ProA)
            (Proline activase); ATP-dependent phenylalanine adenylase
            (PheA) (Phenylalanine activase); ATP-dependent
            D-phenylalanine adenylase (D
          Length = 3587

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 207  ITYHPLTGDNILSQAESELRFHLGERE 287
            + Y P   D+ L  A+ +L FHL ERE
Sbjct: 2448 LVYRPYESDSALDVAKFDLSFHLTERE 2474

>VGLE_PRVRI (P08354) Glycoprotein GI precursor|
          Length = 577

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -2

Query: 208 IVFFFHLKCIRHPCYFMCLWPPDSSSSFGSGHKIDLFSYKVFA 80
           ++++ +  CI HP    CL P D + SF S  +  L + + +A
Sbjct: 275 LLYYVYEPCIYHPRAPECLRPVDPACSFTSPARAALVARRAYA 317


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,623,268
Number of Sequences: 219361
Number of extensions: 707723
Number of successful extensions: 1280
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)