ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast50c09 |
|---|---|
| Clone Library Name | barley_pub |
>MUC1_MOUSE (Q02496) Mucin-1 precursor (Polymorphic epithelial mucin) (PEMT)| (Episialin) Length = 630 Score = 33.1 bits (74), Expect = 0.19 Identities = 22/74 (29%), Positives = 34/74 (45%) Frame = +2 Query: 23 RALADEALSLVLLGSTDENASVPLQQKRTASSPPILSARSPPLKAEAQQDHRADQNHHGS 202 RA D + VL G++ + P+ +ASSP S P + + + + H G+ Sbjct: 78 RAPEDSTSTAVLSGTSSPATTAPVN---SASSPVAHGDTSSPATSPLKDSNSSPVVHSGT 134 Query: 203 TPLATPAPTDSAPS 244 + AT AP DS S Sbjct: 135 SSAATTAPVDSTSS 148
>IMMT_HUMAN (Q16891) Mitochondrial inner membrane protein (Mitofilin) (p87/89)| (Proliferation-inducing gene 4 protein) Length = 758 Score = 31.6 bits (70), Expect = 0.57 Identities = 19/52 (36%), Positives = 29/52 (55%) Frame = +2 Query: 83 SVPLQQKRTASSPPILSARSPPLKAEAQQDHRADQNHHGSTPLATPAPTDSA 238 +VPL +K S P +S+ S +K E++Q Q G TP + APT++A Sbjct: 96 NVPLPKKSIQSGPLKISSVSEVMK-ESKQPASQLQKQKGDTPASATAPTEAA 146
>VP40_HCMVA (P16753) Capsid protein P40 [Contains: Assemblin (Protease) (EC| 3.4.21.97); Capsid assembly protein; Gene UL80 protein; Gene UL80.5 protein; C-terminal peptide] Length = 708 Score = 30.8 bits (68), Expect = 0.97 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +2 Query: 89 PLQQKRTASSPPILSARSPPLKAEAQQDHRADQNHHGSTPLATPAPTDSAP 241 P+Q +SP +L A SPP + ++ A +H PL+ P +AP Sbjct: 304 PVQPPALPASPSVLPAESPPSLSPSEPAEAASMSH----PLSAAVPAATAP 350
>M4K4_MOUSE (P97820) Mitogen-activated protein kinase kinase kinase kinase 4| (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 4) (MEK kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK) (Nck-interacting kinase) Length = 1233 Score = 30.8 bits (68), Expect = 0.97 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = +2 Query: 68 TDENASVPLQQKRTASSPPILSARSPPLKAEAQQDHRADQNHHGST 205 +D + P RT S P+LS R PL+ QQ+ +A Q + S+ Sbjct: 604 SDSDEVPPRVPVRTTSRSPVLSRRDSPLQGGGQQNSQAGQRNSTSS 649
>M4K4_HUMAN (O95819) Mitogen-activated protein kinase kinase kinase kinase 4| (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 4) (MEK kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK) (Nck-interacting kinase) Length = 1239 Score = 30.0 bits (66), Expect = 1.6 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +2 Query: 104 RTASSPPILSARSPPLKAEAQQDHRADQNHHGS 202 RT S P+LS R PL+ QQ+ +A Q + S Sbjct: 626 RTTSRSPVLSRRDSPLQGSGQQNSQAGQRNSTS 658
>ZBT38_RAT (Q5EXX3) Zinc finger and BTB domain-containing protein 38 (Zinc| finger protein expressed in neurons) (Zenon) Length = 1203 Score = 29.6 bits (65), Expect = 2.2 Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 6/54 (11%) Frame = +2 Query: 65 STDENASVPL------QQKRTASSPPILSARSPPLKAEAQQDHRADQNHHGSTP 208 ST EN +PL Q+R+ PILS PP R D+N TP Sbjct: 276 STTENMPLPLVTCPEVNQERSPQPAPILSHSEPPSSEGDVHFPREDENQPSETP 329
>M3K11_HUMAN (Q16584) Mitogen-activated protein kinase kinase kinase 11 (EC| 2.7.11.25) (Mixed lineage kinase 3) (Src-homology 3 domain-containing proline-rich kinase) Length = 847 Score = 29.6 bits (65), Expect = 2.2 Identities = 22/66 (33%), Positives = 31/66 (46%) Frame = +2 Query: 8 QNGRRRALADEALSLVLLGSTDENASVPLQQKRTASSPPILSARSPPLKAEAQQDHRADQ 187 QNGRRR+ DEA + D + S PL + S+PP L+ P E ++ R Sbjct: 577 QNGRRRSRMDEATWYL-----DSDDSSPL---GSPSTPPALNGNPPRPSLEPEEPKRPVP 628 Query: 188 NHHGST 205 GS+ Sbjct: 629 AERGSS 634
>ILV6_YEAST (P25605) Acetolactate synthase small subunit, mitochondrial| precursor (EC 2.2.1.6) (AHAS) (Acetohydroxy-acid synthase small subunit) (ALS) Length = 309 Score = 29.3 bits (64), Expect = 2.8 Identities = 15/52 (28%), Positives = 26/52 (50%) Frame = +2 Query: 8 QNGRRRALADEALSLVLLGSTDENASVPLQQKRTASSPPILSARSPPLKAEA 163 Q+G RR +A ++V S+ +A Q R A+ PP+ + +P A + Sbjct: 7 QSGHRRVVASSCATMVRCSSSSTSALAYKQMHRHATRPPLPTLDTPSWNANS 58
>VNUC_EBOG4 (Q9QCE9) Nucleoprotein (Nucleocapsid protein)| Length = 739 Score = 29.3 bits (64), Expect = 2.8 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Frame = +2 Query: 35 DEALSLVLLGSTDENASVPLQQKRTAS-SPPILSARSPPLKAEAQQDHRADQNH 193 DE SL L S DE RT + +PP R K E QD R DQ+H Sbjct: 577 DETSSLPPLESDDEEQDRDGTSNRTPTVAPPAPVYRDHSEKKELPQDERQDQDH 630
>ZEP2_HUMAN (P31629) Human immunodeficiency virus type I enhancer-binding protein| 2 (HIV-EP2) (MHC-binding protein 2) (MBP-2) Length = 2446 Score = 28.9 bits (63), Expect = 3.7 Identities = 13/28 (46%), Positives = 20/28 (71%) Frame = -2 Query: 93 SGTEAFSSVDPSSTRDRASSANARRLPF 10 SG+ +FSS+ PSS++D S + + R PF Sbjct: 1510 SGSSSFSSLSPSSSQDYPSVSPSSREPF 1537
>SNUT1_MOUSE (Q9Z315) U4/U6.U5 tri-snRNP-associated protein 1 (Squamous cell| carcinoma antigen recognized by T-cells 1) (SART-1) (mSART-1) (Hypoxia-associated factor) Length = 806 Score = 28.9 bits (63), Expect = 3.7 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = +1 Query: 1 SKPKWKTTGIGRRGS-VSCTAGIHGRERLRATPAK 102 S+ + G GRRG+ +G HGRER +A P++ Sbjct: 56 SRERGSERGSGRRGAEAEARSGAHGRERSQAEPSE 90
>PODXL_RABIT (Q28645) Podocalyxin-like protein 1 precursor| Length = 551 Score = 28.9 bits (63), Expect = 3.7 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%) Frame = +2 Query: 20 RRALADEALSLVLLG----STDENASVPLQQKRTASSPPILSARSPPLKAEAQQDHRADQ 187 R ALA AL L+LL S +++ T++S A +P K+ A+Q Sbjct: 2 RSALALAALLLLLLSPPSLSQEKSPQPGPTPMATSTSTRPAPASAPAPKSSVAASVPAEQ 61 Query: 188 NHHGSTPLATPAPTDSAPS 244 N +TP+ T AP +PS Sbjct: 62 N---TTPMTTKAPATQSPS 77
>VGLZ_EHV1K (P32515) Glycoprotein precursor| Length = 383 Score = 28.9 bits (63), Expect = 3.7 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 7/70 (10%) Frame = +2 Query: 62 GSTDENASVPLQQKRTASSPPILSARSPPLKAEAQQ---DHRADQNHHGSTPL----ATP 220 G+T+ ++S T+SSPP + S P A AQ+ HR +P TP Sbjct: 45 GTTNSSSSPTTSPPTTSSSPPTSTHTSSPSTANAQKHAGHHRGRAGGRRGSPQGGSHTTP 104 Query: 221 APTDSAPS*D 250 P PS D Sbjct: 105 HPDRLTPSPD 114
>VGLG_HHV2H (P13290) Glycoprotein G| Length = 699 Score = 28.9 bits (63), Expect = 3.7 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 5/59 (8%) Frame = +2 Query: 83 SVPLQQKRTASSPPILSARSPPLKAEAQQDHRADQNHHGS-----TPLATPAPTDSAPS 244 +V ++ AS P S S PL A A A + S TP TPAPT P+ Sbjct: 401 AVTPEETAVASPPATASVESSPLPAAAAATPGAGHTNTSSASAAKTPPTTPAPTTPPPT 459
>MVP_HUMAN (Q14764) Major vault protein (MVP) (Lung resistance-related| protein) Length = 892 Score = 28.9 bits (63), Expect = 3.7 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = -3 Query: 101 FAGVARRRSRPWIPAVQETEPRLP 30 F GV+RR W+ VQ+TE +P Sbjct: 237 FRGVSRRTGEEWLVTVQDTEAHVP 260
>TOR_CAEEL (Q95Q95) Target of rapamycin homolog (EC 2.7.11.1) (CeTOR) (Lethal| protein 363) Length = 2697 Score = 25.4 bits (54), Expect(2) = 4.3 Identities = 10/32 (31%), Positives = 17/32 (53%) Frame = +2 Query: 143 PPLKAEAQQDHRADQNHHGSTPLATPAPTDSA 238 PP+ A + HH +PL+ +P++SA Sbjct: 2009 PPMPAYLSSNSSLPPQHHHVSPLSNDSPSNSA 2040 Score = 21.6 bits (44), Expect(2) = 4.3 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = +2 Query: 95 QQKRTASSPPILSARSPPLKAE 160 QQ + PP+ A SPP A+ Sbjct: 1954 QQPKKMHIPPVTRATSPPPPAQ 1975
>SNUT1_RAT (Q5XIW8) U4/U6.U5 tri-snRNP-associated protein 1 (Squamous cell| carcinoma antigen recognized by T-cells 1) (SART-1) (rSART-1) Length = 806 Score = 28.5 bits (62), Expect = 4.8 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = +1 Query: 1 SKPKWKTTGIGRRGS-VSCTAGIHGRERLRATPAK 102 S+ + G GRRG+ +G HGRER +A P++ Sbjct: 56 SRERGAERGSGRRGAEAEARSGAHGRERSQAEPSE 90
>ENAH_HUMAN (Q8N8S7) Protein enabled homolog| Length = 591 Score = 28.5 bits (62), Expect = 4.8 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Frame = +2 Query: 65 STDENASVPLQQKRT--ASSPPILSARSPPLKAEAQQDHRADQNHH--GSTPLATPA 223 ST E P ++ T S P++S R P K + D+R+ + H STPL+ P+ Sbjct: 488 STPEPTRKPWERTNTMNGSKSPVISRRDSPRKNQIVFDNRSYDSLHRPKSTPLSQPS 544
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 28.5 bits (62), Expect = 4.8 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%) Frame = +2 Query: 14 GRRRALADEALS-LVLLGSTDENASVPLQQKRTASSPPILSARSPPLKAEAQQDHRADQN 190 GRRR + +LS S+ + S P + + SSPP + R P + ++ HR Sbjct: 343 GRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRP--- 399 Query: 191 HHGSTPLATPAPTDSAPS 244 S+P P T +P+ Sbjct: 400 ---SSPATPPPKTRHSPT 414
>TERT_HUMAN (O14746) Telomerase reverse transcriptase (EC 2.7.7.49) (Telomerase| catalytic subunit) (HEST2) (Telomerase-associated protein 2) (TP2) Length = 1132 Score = 28.1 bits (61), Expect = 6.3 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = -3 Query: 170 LAALQPSVAANEQTG*EVTTPSVFAGVARRRSRPWIPAVQETEPRLP 30 L++L+PS+ TG ++F G SRPW+P PRLP Sbjct: 347 LSSLRPSL-----TGARRLVETIFLG-----SRPWMPGTPRRLPRLP 383
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 28.1 bits (61), Expect = 6.3 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%) Frame = +2 Query: 17 RRRALADEALSLVLLGSTDENASVPLQQ--KRTASSPPILSARSPPLKAEAQQDHRADQN 190 RRR + +LS S+ + P ++ KRT SSPP + R P + ++ HR Sbjct: 342 RRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRLSPSASPPRRRHR---- 397 Query: 191 HHGSTPLATPAP 226 +P A+P P Sbjct: 398 ---PSPPASPPP 406
>IF2_RHOPA (Q6NCN5) Translation initiation factor IF-2| Length = 883 Score = 28.1 bits (61), Expect = 6.3 Identities = 17/60 (28%), Positives = 24/60 (40%) Frame = +2 Query: 65 STDENASVPLQQKRTASSPPILSARSPPLKAEAQQDHRADQNHHGSTPLATPAPTDSAPS 244 ST + P + T + P + R P + AEA D A + A PAP P+ Sbjct: 187 STTTTTAAPARPATTTTRTPTPAGRPPAVAAEAGDDDEAPRMIRRPGGPARPAPPPKQPA 246
>PALA_EMENI (P79020) pH-response regulator protein palA/RIM20| Length = 847 Score = 28.1 bits (61), Expect = 6.3 Identities = 19/59 (32%), Positives = 22/59 (37%), Gaps = 6/59 (10%) Frame = +2 Query: 83 SVPLQQKRTASSP------PILSARSPPLKAEAQQDHRADQNHHGSTPLATPAPTDSAP 241 S P+ AS P P+ PP +A Q Q TPL P PT S P Sbjct: 751 SAPVSVSAAASVPAPTHFNPVKPQPQPPSQAIPPQSQPQPQPQPLRTPLTAPQPTRSVP 809
>HUNB_DROTA (O46260) Protein hunchback (Fragments)| Length = 192 Score = 28.1 bits (61), Expect = 6.3 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +2 Query: 161 AQQDHRADQNHHGSTPLATPAPTDSAPS 244 A H AD N + S+P +P P+ + PS Sbjct: 24 AHHSHHADSNSNASSPHQSPLPSPNPPS 51
>PHAR2_HUMAN (O75167) Phosphatase and actin regulator 2| Length = 634 Score = 28.1 bits (61), Expect = 6.3 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = +2 Query: 128 LSARSPPLKAEAQQDHRADQNHHGSTPLATPAPTDSAP 241 +S ++PPL+ +A +D + + +H TP A PA SAP Sbjct: 125 VSEKTPPLEEQA-EDKKENTENHSETP-AAPALPPSAP 160
>DREB_MOUSE (Q9QXS6) Drebrin (Developmentally-regulated brain protein)| Length = 705 Score = 27.7 bits (60), Expect = 8.2 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 6/58 (10%) Frame = +2 Query: 83 SVPLQQKRTASSPP------ILSARSPPLKAEAQQDHRADQNHHGSTPLATPAPTDSA 238 S P ++SSPP I R+P L + H TP+ T +P+DS+ Sbjct: 332 SGPSSSSSSSSSPPRTPFPYITCHRTPNLSSSLPCSHLDSHRRMAPTPIPTRSPSDSS 389
>RLM1_YEAST (Q12224) Transcription factor RLM1| Length = 676 Score = 27.7 bits (60), Expect = 8.2 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = +2 Query: 74 ENASVPLQQKRTASSPPILSARSPPLKAEAQQDHRADQNHHGST-PLATPAPTDSAPS 244 ENA PLQ + P+ +R+P + QQ + +H S L P+ + S+PS Sbjct: 183 ENALPPLQHLKRLKPDPLQISRTP----QQQQQQNISRPYHSSMYNLNQPSSSSSSPS 236
>DREB_RAT (Q07266) Drebrin (Developmentally-regulated brain protein)| Length = 706 Score = 27.7 bits (60), Expect = 8.2 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 6/58 (10%) Frame = +2 Query: 83 SVPLQQKRTASSPP------ILSARSPPLKAEAQQDHRADQNHHGSTPLATPAPTDSA 238 S P ++SSPP I R+P L + H TP+ T +P+DS+ Sbjct: 330 SGPSSSSSSSSSPPRTPFPYITCHRTPNLSSSLPCSHLDSHRRMAPTPIPTRSPSDSS 387
>RD23B_MOUSE (P54728) UV excision repair protein RAD23 homolog B (mHR23B) (XP-C| repair-complementing complex 58 kDa protein) (p58) Length = 416 Score = 27.7 bits (60), Expect = 8.2 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = +2 Query: 110 ASSPPILSARSPPLKAEAQQDHRADQNHHGSTPLATPAPTDSAP 241 +++P +A S P A A Q + + + L +PAP DS P Sbjct: 125 STTPASTTASSEPAPAGATQPEKPAEKPAQTPVLTSPAPADSTP 168
>PACC_CEPAC (Q96X49) pH-response transcription factor pacC/RIM101| Length = 621 Score = 27.7 bits (60), Expect = 8.2 Identities = 17/60 (28%), Positives = 29/60 (48%) Frame = +2 Query: 65 STDENASVPLQQKRTASSPPILSARSPPLKAEAQQDHRADQNHHGSTPLATPAPTDSAPS 244 +T S ++R S + AR+ P ++ +H + NH STP A +P ++PS Sbjct: 464 TTTLGPSFESNERRRYSGGMLQRARAAPPRSTDNHNH--NHNHGASTPKAPVSPALASPS 521
>LMO6_HUMAN (O43900) LIM domain only protein 6 (Triple LIM domain protein 6)| Length = 615 Score = 27.7 bits (60), Expect = 8.2 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Frame = +2 Query: 101 KRTASSPPILSAR--SPPLKAEAQQDHRADQNHH 196 +RT S+PP R SPP +A +++ H +HH Sbjct: 487 RRTLSAPPAQRRRPRSPPPRAPSRRRHHHHNHHH 520
>VNUC_EBOZM (P18272) Nucleoprotein (Nucleocapsid protein)| Length = 739 Score = 27.7 bits (60), Expect = 8.2 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Frame = +2 Query: 35 DEALSLVLLGSTDENASVPLQQKRTAS-SPPILSARSPPLKAEAQQDHRADQNH 193 DE SL L S DE RT + +PP R K E QD + DQ+H Sbjct: 577 DETSSLPPLESDDEEQDRDGTSNRTPTVAPPAPVYRDHSEKKELPQDEQQDQDH 630
>VNUC_EBOZ5 (O72142) Nucleoprotein (Nucleocapsid protein)| Length = 739 Score = 27.7 bits (60), Expect = 8.2 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Frame = +2 Query: 35 DEALSLVLLGSTDENASVPLQQKRTAS-SPPILSARSPPLKAEAQQDHRADQNH 193 DE SL L S DE RT + +PP R K E QD + DQ+H Sbjct: 577 DETSSLPPLESDDEEQDRDGTSNRTPTVAPPAPVYRDHSEKRELPQDEQQDQDH 630
>FINC_RAT (P04937) Fibronectin precursor (FN)| Length = 2477 Score = 27.7 bits (60), Expect = 8.2 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%) Frame = -3 Query: 158 QPSVAAN---EQTG*EVTTPSVFAGVARRRSRPWIPAVQE 48 QPSV E+ G TTP A R R RP++P V E Sbjct: 2133 QPSVGQQMIFEEHGFRRTTPPTAATPVRLRPRPYLPNVDE 2172
>FINC_MOUSE (P11276) Fibronectin precursor (FN)| Length = 2477 Score = 27.7 bits (60), Expect = 8.2 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%) Frame = -3 Query: 158 QPSVAAN---EQTG*EVTTPSVFAGVARRRSRPWIPAVQE 48 QPSV E+ G TTP A R R RP++P V E Sbjct: 2133 QPSVGQQMIFEEHGFRRTTPPTAATPVRLRPRPYLPNVDE 2172
>PAK3_PONPY (Q7YQL3) Serine/threonine-protein kinase PAK 3 (EC 2.7.11.1)| (p21-activated kinase 3) (PAK-3) Length = 559 Score = 27.7 bits (60), Expect = 8.2 Identities = 11/41 (26%), Positives = 22/41 (53%) Frame = +2 Query: 104 RTASSPPILSARSPPLKAEAQQDHRADQNHHGSTPLATPAP 226 +TAS PP+ +PP+ E ++ +++ + P+ P P Sbjct: 174 KTASEPPL----APPVSEEEDEEEEEEEDENEPPPVIAPRP 210
>PAK3_PANTR (Q7YQL4) Serine/threonine-protein kinase PAK 3 (EC 2.7.11.1)| (p21-activated kinase 3) (PAK-3) Length = 559 Score = 27.7 bits (60), Expect = 8.2 Identities = 11/41 (26%), Positives = 22/41 (53%) Frame = +2 Query: 104 RTASSPPILSARSPPLKAEAQQDHRADQNHHGSTPLATPAP 226 +TAS PP+ +PP+ E ++ +++ + P+ P P Sbjct: 174 KTASEPPL----APPVSEEEDEEEEEEEDENEPPPVIAPRP 210
>PAK3_HUMAN (O75914) Serine/threonine-protein kinase PAK 3 (EC 2.7.11.1)| (p21-activated kinase 3) (PAK-3) (Beta-PAK) (Oligophrenin-3) Length = 559 Score = 27.7 bits (60), Expect = 8.2 Identities = 11/41 (26%), Positives = 22/41 (53%) Frame = +2 Query: 104 RTASSPPILSARSPPLKAEAQQDHRADQNHHGSTPLATPAP 226 +TAS PP+ +PP+ E ++ +++ + P+ P P Sbjct: 174 KTASEPPL----APPVSEEEDEEEEEEEDENEPPPVIAPRP 210
>COBIJ_MYCTU (P66877) Cobalamin biosynthesis protein cobIJ [Includes:| Precorrin-2 C(20)-methyltransferase (EC 2.1.1.130) (S-adenosyl-L-methionine--precorrin-2 methyltransferase) (SP2MT); Precorrin-3B C17-methyltransferase (EC 2.1.1.131) (S-adenosyl-L-meth Length = 508 Score = 27.7 bits (60), Expect = 8.2 Identities = 16/65 (24%), Positives = 30/65 (46%) Frame = +2 Query: 14 GRRRALADEALSLVLLGSTDENASVPLQQKRTASSPPILSARSPPLKAEAQQDHRADQNH 193 GRRRAL +++V LG D + P ++ A++ ++ R + E + R + Sbjct: 239 GRRRALLTGTVAVVGLGPGDSDWMTPQSRRELAAATDLIGYRGYLDRVEVRDGQRRHPSD 298 Query: 194 HGSTP 208 + P Sbjct: 299 NTDEP 303
>COBIJ_MYCBO (P66878) Cobalamin biosynthesis protein cobIJ [Includes:| Precorrin-2 C(20)-methyltransferase (EC 2.1.1.130) (S-adenosyl-L-methionine--precorrin-2 methyltransferase) (SP2MT); Precorrin-3B C17-methyltransferase (EC 2.1.1.131) (S-adenosyl-L-meth Length = 508 Score = 27.7 bits (60), Expect = 8.2 Identities = 16/65 (24%), Positives = 30/65 (46%) Frame = +2 Query: 14 GRRRALADEALSLVLLGSTDENASVPLQQKRTASSPPILSARSPPLKAEAQQDHRADQNH 193 GRRRAL +++V LG D + P ++ A++ ++ R + E + R + Sbjct: 239 GRRRALLTGTVAVVGLGPGDSDWMTPQSRRELAAATDLIGYRGYLDRVEVRDGQRRHPSD 298 Query: 194 HGSTP 208 + P Sbjct: 299 NTDEP 303 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,906,030 Number of Sequences: 219361 Number of extensions: 603309 Number of successful extensions: 2803 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 2684 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2795 length of database: 80,573,946 effective HSP length: 58 effective length of database: 67,851,008 effective search space used: 1628424192 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
