ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast50a08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
2dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
3dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
4dbj|AK100034.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
5gb|AY921645.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR8... 56 7e-05
6dbj|AK106409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 7e-05
7gb|AY108381.1| Zea mays PCO088244 mRNA sequence 56 7e-05
8gb|AC174930.1| Oryza sativa (japonica cultivar-group) BAC clone ... 56 7e-05
9ref|XM_648008.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 46 0.067
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.067
11dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.067
12dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.067
13dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.067
14dbj|AK073836.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.27
15dbj|AK067218.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.27
16gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone ... 44 0.27
17ref|NM_202428.1| Arabidopsis thaliana OPR1; 12-oxophytodienoate ... 42 1.0
18ref|NM_106318.3| Arabidopsis thaliana OPR1; 12-oxophytodienoate ... 42 1.0
19gb|BT020365.1| Arabidopsis thaliana At1g76680 gene, complete cds 42 1.0
20emb|Y10617.1|AT12OXOPR A.thaliana mRNA for 12-oxo-phytodienoate ... 42 1.0
21gb|AY074874.1| Arabidopsis thaliana At1g76680/F28O16_5 mRNA, com... 42 1.0
22gb|AC010718.5|AC010718 Arabidopsis thaliana chromosome 1 BAC F28... 42 1.0
23gb|AY087801.1| Arabidopsis thaliana clone 38527 mRNA, complete s... 42 1.0
24gb|U92460.1|ATU92460 Arabidopsis thaliana 12-oxophytodienoate re... 42 1.0
25dbj|AB030705.1| Lithospermum erythrorhizon mRNA for LEDI-5a prot... 42 1.0
26emb|AL772386.4| Mouse DNA sequence from clone RP23-89G22 on chro... 42 1.0
27gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7... 40 4.1
28gb|AC165353.4| Mus musculus BAC clone RP23-167C2 from chromosome... 40 4.1
29ref|XM_746355.1| Aspergillus fumigatus Af293 multidrug resistant... 40 4.1
30gb|AC125050.6| Mus musculus BAC clone RP23-372I18 from chromosom... 40 4.1
31gb|AF098985.2| Caenorhabditis elegans cosmid C08G5, complete seq... 40 4.1
32emb|AL589846.5| Human DNA sequence from clone RP11-199O16 on chr... 40 4.1
33emb|AL121770.1|SPAC821 S.pombe chromosome I cosmid c821 40 4.1
34dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 40 4.1
35gb|AC021701.8| Homo sapiens chromosome 18, clone RP11-704G7, com... 40 4.1
36gb|AC048362.14| Mus musculus, clone RP23-105E2, complete sequence 40 4.1
37ref|NM_061403.1| Caenorhabditis elegans C08G5.6 (C08G5.6) mRNA, ... 40 4.1
38gb|AC000107.2|AC000107 Genomic sequence for Arabidopsis thaliana... 40 4.1
39gb|AY106967.1| Zea mays PCO088243 mRNA sequence 40 4.1
40gb|AF009512.1|AF009512 Schizosaccharomyces pombe protein kinase ... 40 4.1
41gb|AC161251.3| Mus musculus BAC clone RP24-174C13 from chromosom... 40 4.1
42gb|AC150648.2| Mus musculus BAC clone RP23-235N5 from 7, complet... 40 4.1
43emb|AL671733.6| Mouse DNA sequence from clone RP23-83I22 on chro... 40 4.1 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                            
Query: 176      cctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgaggtcggcgta 235
                ||||| ||||||||||||||| |||||||| ||||||||  | |  || |||||||||||
Sbjct: 15167404 cctctccggcaggtcagggttggccaggaacagccgcccgtacgccaccaggtcggcgta 15167463

                                                             
Query: 236      ccccgaggagaccgccttgtccccctcttcccgatcatacccacc 280
                 ||   || |||||||||||| || || ||||| || ||||||||
Sbjct: 15167464 gccgtcggcgaccgccttgtcgccttcgtcccggtcgtacccacc 15167508
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>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0043B10
          Length = 167399

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                          
Query: 176    cctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgaggtcggcgta 235
              ||||| ||||||||||||||| |||||||| ||||||||  | |  || |||||||||||
Sbjct: 139370 cctctccggcaggtcagggttggccaggaacagccgcccgtacgccaccaggtcggcgta 139429

                                                           
Query: 236    ccccgaggagaccgccttgtccccctcttcccgatcatacccacc 280
               ||   || |||||||||||| || || ||||| || ||||||||
Sbjct: 139430 gccgtcggcgaccgccttgtcgccttcgtcccggtcgtacccacc 139474
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>dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0493G01
          Length = 167587

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                         
Query: 176   cctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgaggtcggcgta 235
             ||||| ||||||||||||||| |||||||| ||||||||  | |  || |||||||||||
Sbjct: 20777 cctctccggcaggtcagggttggccaggaacagccgcccgtacgccaccaggtcggcgta 20836

                                                          
Query: 236   ccccgaggagaccgccttgtccccctcttcccgatcatacccacc 280
              ||   || |||||||||||| || || ||||| || ||||||||
Sbjct: 20837 gccgtcggcgaccgccttgtcgccttcgtcccggtcgtacccacc 20881
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>dbj|AK100034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149N02, full
            insert sequence
          Length = 2710

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 86/105 (81%)
 Strand = Plus / Minus

                                                                        
Query: 176  cctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgaggtcggcgta 235
            ||||| ||||||||||||||| |||||||| ||||||||  | |  || |||||||||||
Sbjct: 2453 cctctccggcaggtcagggttggccaggaacagccgcccgtacgccaccaggtcggcgta 2394

                                                         
Query: 236  ccccgaggagaccgccttgtccccctcttcccgatcatacccacc 280
             ||   || |||||||||||| || || ||||| || ||||||||
Sbjct: 2393 gccgtcggcgaccgccttgtcgccttcgtcccggtcgtacccacc 2349
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>gb|AY921645.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR8) mRNA, complete cds
          Length = 1529

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 90   aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 137
            ||||||||||| |||||||| ||||||||||| | | |||||||||||
Sbjct: 1269 aacgggtagtccgtgtaaccaacgacgggatccggggtgtagaacgtc 1222
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>dbj|AK106409.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-H07, full
            insert sequence
          Length = 1360

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 90   aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 137
            ||||||||||||||||| ||| ||||||| |||| | |||||||||||
Sbjct: 1150 aacgggtagtcggtgtagccggcgacggggtcggcggtgtagaacgtc 1103
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>gb|AY108381.1| Zea mays PCO088244 mRNA sequence
          Length = 694

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 90  aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 137
           ||||||||||| |||||||| ||||||||||| | | |||||||||||
Sbjct: 434 aacgggtagtccgtgtaaccaacgacgggatccggggtgtagaacgtc 387
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>gb|AC174930.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBa0043H01, from
             chromosome 4, complete sequence
          Length = 15426

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 90    aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 137
             ||||||||||||||||| ||| ||||||| |||| | |||||||||||
Sbjct: 12779 aacgggtagtcggtgtagccggcgacggggtcggcggtgtagaacgtc 12826
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>ref|XM_648008.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (94.t00028)
            partial mRNA
          Length = 1644

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 40   caatatatggatcaatcattatttatg 66
            ||||||||| |||||||||||||||||
Sbjct: 1264 caatatatgaatcaatcattatttatg 1290
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 89/111 (80%)
 Strand = Plus / Plus

                                                                           
Query: 167     gagctctagcctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgag 226
               |||||| | |||||| ||||| ||||| || |||| |||||||| |||| | | ||||||
Sbjct: 5889728 gagctcgaacctcttgggcagatcaggattcgccaagaagagcctcccataggcgacgag 5889787

                                                                  
Query: 227     gtcggcgtaccccgaggagaccgccttgtccccctcttcccgatcataccc 277
               |||||| || ||   ||  |||||||||| ||| |||||||| || |||||
Sbjct: 5889788 gtcggcatagccatcggcaaccgccttgttcccttcttcccggtcgtaccc 5889838
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>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0024N18
          Length = 128739

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 89/111 (80%)
 Strand = Plus / Plus

                                                                         
Query: 167   gagctctagcctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgag 226
             |||||| | |||||| ||||| ||||| || |||| |||||||| |||| | | ||||||
Sbjct: 11380 gagctcgaacctcttgggcagatcaggattcgccaagaagagcctcccataggcgacgag 11439

                                                                
Query: 227   gtcggcgtaccccgaggagaccgccttgtccccctcttcccgatcataccc 277
             |||||| || ||   ||  |||||||||| ||| |||||||| || |||||
Sbjct: 11440 gtcggcatagccatcggcaaccgccttgttcccttcttcccggtcgtaccc 11490
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>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0537F07
          Length = 147724

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 89/111 (80%)
 Strand = Plus / Plus

                                                                         
Query: 167   gagctctagcctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgag 226
             |||||| | |||||| ||||| ||||| || |||| |||||||| |||| | | ||||||
Sbjct: 90503 gagctcgaacctcttgggcagatcaggattcgccaagaagagcctcccataggcgacgag 90562

                                                                
Query: 227   gtcggcgtaccccgaggagaccgccttgtccccctcttcccgatcataccc 277
             |||||| || ||   ||  |||||||||| ||| |||||||| || |||||
Sbjct: 90563 gtcggcatagccatcggcaaccgccttgttcccttcttcccggtcgtaccc 90613
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>dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E09, full
            insert sequence
          Length = 1517

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 89/111 (80%)
 Strand = Plus / Minus

                                                                        
Query: 167  gagctctagcctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgag 226
            |||||| | |||||| ||||| ||||| || |||| |||||||| |||| | | ||||||
Sbjct: 1180 gagctcgaacctcttgggcagatcaggattcgccaagaagagcctcccataggcgacgag 1121

                                                               
Query: 227  gtcggcgtaccccgaggagaccgccttgtccccctcttcccgatcataccc 277
            |||||| || ||   ||  |||||||||| ||| |||||||| || |||||
Sbjct: 1120 gtcggcatagccatcggcaaccgccttgttcccttcttcccggtcgtaccc 1070
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>dbj|AK073836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069H04, full
            insert sequence
          Length = 2314

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 176  cctcttcggcaggtcagggtttgccaggaa 205
            |||| ||||||||||||| |||||||||||
Sbjct: 1981 cctcctcggcaggtcaggatttgccaggaa 1952
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>dbj|AK067218.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098J23, full
            insert sequence
          Length = 2420

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 176  cctcttcggcaggtcagggtttgccaggaa 205
            |||| ||||||||||||| |||||||||||
Sbjct: 2087 cctcctcggcaggtcaggatttgccaggaa 2058
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>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from
            chromosome 4, complete sequence
          Length = 90825

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 176  cctcttcggcaggtcagggtttgccaggaa 205
            |||| ||||||||||||| |||||||||||
Sbjct: 3632 cctcctcggcaggtcaggatttgccaggaa 3661
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>ref|NM_202428.1| Arabidopsis thaliana OPR1; 12-oxophytodienoate reductase AT1G76680
            (OPR1) transcript variant AT1G76680.2 mRNA, complete cds
          Length = 1460

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 93   gggtagtcggtgtaaccgacgacgggatc 121
            ||||| ||||||||||||||||| |||||
Sbjct: 1242 gggtaatcggtgtaaccgacgactggatc 1214
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>ref|NM_106318.3| Arabidopsis thaliana OPR1; 12-oxophytodienoate reductase AT1G76680
            (OPR1) transcript variant AT1G76680.1 mRNA, complete cds
          Length = 1451

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 93   gggtagtcggtgtaaccgacgacgggatc 121
            ||||| ||||||||||||||||| |||||
Sbjct: 1233 gggtaatcggtgtaaccgacgactggatc 1205
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>gb|BT020365.1| Arabidopsis thaliana At1g76680 gene, complete cds
          Length = 1119

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 93   gggtagtcggtgtaaccgacgacgggatc 121
            ||||| ||||||||||||||||| |||||
Sbjct: 1097 gggtaatcggtgtaaccgacgactggatc 1069
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>emb|Y10617.1|AT12OXOPR A.thaliana mRNA for 12-oxo-phytodienoate reductase
          Length = 1311

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 93   gggtagtcggtgtaaccgacgacgggatc 121
            ||||| ||||||||||||||||| |||||
Sbjct: 1162 gggtaatcggtgtaaccgacgactggatc 1134
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>gb|AY074874.1| Arabidopsis thaliana At1g76680/F28O16_5 mRNA, complete cds
          Length = 1252

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 93   gggtagtcggtgtaaccgacgacgggatc 121
            ||||| ||||||||||||||||| |||||
Sbjct: 1167 gggtaatcggtgtaaccgacgactggatc 1139
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>gb|AC010718.5|AC010718 Arabidopsis thaliana chromosome 1 BAC F28O16 genomic sequence, complete
             sequence
          Length = 87684

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 93    gggtagtcggtgtaaccgacgacgggatc 121
             ||||| ||||||||||||||||| |||||
Sbjct: 15021 gggtaatcggtgtaaccgacgactggatc 14993
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>gb|AY087801.1| Arabidopsis thaliana clone 38527 mRNA, complete sequence
          Length = 1280

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 93   gggtagtcggtgtaaccgacgacgggatc 121
            ||||| ||||||||||||||||| |||||
Sbjct: 1167 gggtaatcggtgtaaccgacgactggatc 1139
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>gb|U92460.1|ATU92460 Arabidopsis thaliana 12-oxophytodienoate reductase OPR1 and
            12-oxophytodienoate reductase OPR2 genes, complete cds
          Length = 7079

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 93   gggtagtcggtgtaaccgacgacgggatc 121
            ||||| ||||||||||||||||| |||||
Sbjct: 4615 gggtaatcggtgtaaccgacgactggatc 4587
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>dbj|AB030705.1| Lithospermum erythrorhizon mRNA for LEDI-5a protein, complete cds
          Length = 1454

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 86   aagaaacgggtagtcggtgtaaccgacgacggg 118
            |||||| |||||||||||||| ||||| |||||
Sbjct: 1139 aagaaatgggtagtcggtgtagccgacaacggg 1107
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>emb|AL772386.4| Mouse DNA sequence from clone RP23-89G22 on chromosome 15, complete
             sequence
          Length = 149807

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 185   caggtcagggtttgccaggaa 205
             |||||||||||||||||||||
Sbjct: 70558 caggtcagggtttgccaggaa 70578
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>gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7) mRNA, complete cds
          Length = 1594

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 95   gtagtcggtgtaaccgacgacggg 118
            |||||| |||||||||||||||||
Sbjct: 1400 gtagtccgtgtaaccgacgacggg 1377
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>gb|AC165353.4| Mus musculus BAC clone RP23-167C2 from chromosome 3, complete sequence
          Length = 198393

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    aagaaaaggttccatttgat 29
             ||||||||||||||||||||
Sbjct: 24462 aagaaaaggttccatttgat 24443
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>ref|XM_746355.1| Aspergillus fumigatus Af293 multidrug resistant protein
           (Afu4g13830) partial mRNA
          Length = 1527

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 284 tgcaatgaaggtgcccttgaaggc 307
           |||||||||||||||| |||||||
Sbjct: 264 tgcaatgaaggtgcccatgaaggc 241
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>gb|AC125050.6| Mus musculus BAC clone RP23-372I18 from chromosome 7, complete sequence
          Length = 199810

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    tggttcaatgacacatcaag 84
             ||||||||||||||||||||
Sbjct: 70383 tggttcaatgacacatcaag 70364
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>gb|AF098985.2| Caenorhabditis elegans cosmid C08G5, complete sequence
          Length = 40550

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     aaaaagaaaaggttccattt 26
             ||||||||||||||||||||
Sbjct: 38262 aaaaagaaaaggttccattt 38281
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>emb|AL589846.5| Human DNA sequence from clone RP11-199O16 on chromosome 9, complete
             sequence
          Length = 44495

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    ttttcacatggcaatatatg 48
             ||||||||||||||||||||
Sbjct: 17566 ttttcacatggcaatatatg 17547
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>emb|AL121770.1|SPAC821 S.pombe chromosome I cosmid c821
          Length = 35452

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   catcctgttgtacttattaa 156
             ||||||||||||||||||||
Sbjct: 33192 catcctgttgtacttattaa 33173
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>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 247     ccgccttgtccccctcttcc 266
               ||||||||||||||||||||
Sbjct: 4004811 ccgccttgtccccctcttcc 4004830
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>gb|AC021701.8| Homo sapiens chromosome 18, clone RP11-704G7, complete sequence
          Length = 170311

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      agaaaaagaaaaggttccat 24
              ||||||||||||||||||||
Sbjct: 101167 agaaaaagaaaaggttccat 101186
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>gb|AC048362.14| Mus musculus, clone RP23-105E2, complete sequence
          Length = 209211

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     aaaaagaaaaggttccattt 26
             ||||||||||||||||||||
Sbjct: 84547 aaaaagaaaaggttccattt 84528
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>ref|NM_061403.1| Caenorhabditis elegans C08G5.6 (C08G5.6) mRNA, complete cds
          Length = 921

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 7   aaaaagaaaaggttccattt 26
           ||||||||||||||||||||
Sbjct: 770 aaaaagaaaaggttccattt 789
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>gb|AC000107.2|AC000107 Genomic sequence for Arabidopsis thaliana BAC F17F8 from chromosome I,
             complete sequence
          Length = 102393

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 43    tatatggatcaatcattatttatg 66
             ||||||||| ||||||||||||||
Sbjct: 27805 tatatggatgaatcattatttatg 27828
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>gb|AY106967.1| Zea mays PCO088243 mRNA sequence
          Length = 765

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 95  gtagtcggtgtaaccgacgacggg 118
           |||||| |||||||||||||||||
Sbjct: 571 gtagtccgtgtaaccgacgacggg 548
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>gb|AF009512.1|AF009512 Schizosaccharomyces pombe protein kinase Orb6p (orb6) gene, complete
            cds
          Length = 2344

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 137  catcctgttgtacttattaa 156
            ||||||||||||||||||||
Sbjct: 2289 catcctgttgtacttattaa 2270
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>gb|AC161251.3| Mus musculus BAC clone RP24-174C13 from chromosome 3, complete sequence
          Length = 151247

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    aagaaaaggttccatttgat 29
             ||||||||||||||||||||
Sbjct: 37228 aagaaaaggttccatttgat 37247
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>gb|AC150648.2| Mus musculus BAC clone RP23-235N5 from 7, complete sequence
          Length = 190414

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     tggttcaatgacacatcaag 84
              ||||||||||||||||||||
Sbjct: 156206 tggttcaatgacacatcaag 156187
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>emb|AL671733.6| Mouse DNA sequence from clone RP23-83I22 on chromosome 4, complete
              sequence
          Length = 186686

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    atgaaggtgcccttgaaggc 307
              ||||||||||||||||||||
Sbjct: 183740 atgaaggtgcccttgaaggc 183721


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,291,218
Number of Sequences: 3902068
Number of extensions: 3291218
Number of successful extensions: 63173
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63035
Number of HSP's gapped (non-prelim): 133
length of query: 315
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 293
effective length of database: 17,147,199,772
effective search space: 5024129533196
effective search space used: 5024129533196
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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