ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast48h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL161550.2|ATCHRIV50 Arabidopsis thaliana DNA chromosome 4, ... 42 0.55
2emb|AL022580.1|ATT5K18 Arabidopsis thaliana DNA chromosome 4, BA... 42 0.55
3gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, comp... 40 2.2
4gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete s... 40 2.2
5emb|AL023713.1|HS324L9 Human DNA sequence from clone RP3-324L9 o... 40 2.2
6gb|AC034268.4| Homo sapiens chromosome 17, clone RP11-312B18, co... 40 2.2
7gb|AC012173.9| Homo sapiens chromosome 16 clone RP11-152P23, com... 40 2.2
8gb|AC084193.5| Homo sapiens BAC clone RP11-545M11 from 2, comple... 40 2.2
9gb|AC155278.5| Mus musculus 6 BAC RP24-141E2 (Roswell Park Cance... 40 2.2
10gb|AC004050.1|AC004050 Homo sapiens chromosome 4 clone B207D4 ma... 40 2.2
11gb|AF020713.1|AF020713 Bacteriophage SPBc2 complete genome 40 2.2
12emb|Z99115.2|BSUB0012 Bacillus subtilis complete genome (section... 40 2.2
13ref|NM_192751.1| Oryza sativa (japonica cultivar-group), predic... 38 8.6
14gb|AC005723.1| Homo sapiens chromosome 5, BAC clone 194j15 (LBNL... 38 8.6
15ref|XM_424637.1| PREDICTED: Gallus gallus similar to MGC53772 pr... 38 8.6
16gb|AC134433.3| Mus musculus BAC clone RP24-405A4 from chromosome... 38 8.6
17gb|AC145377.2| Pan troglodytes BAC clone RP43-11P19 from 7, comp... 38 8.6
18gb|AC125379.4| Mus musculus BAC clone RP23-53B19 from chromosome... 38 8.6
19gb|AY811778.1| Schistosoma japonicum SJCHGC03744 protein mRNA, p... 38 8.6
20gb|AC139318.5| Mus musculus BAC clone RP24-498K8 from chromosome... 38 8.6
21gb|AC146481.2| Oryza sativa chromosome 10 B1288B10 genomic sequ... 38 8.6
22gb|AC140283.3| Mus musculus BAC clone RP24-510I14 from chromosom... 38 8.6
23gb|AC110534.11| Mus musculus chromosome 17, clone RP23-174D11, c... 38 8.6
24gb|AC010991.4| Homo sapiens BAC clone CTD-3065P21 from 7, comple... 38 8.6
25gb|AC145518.1| Pan troglodytes BAC clone RP43-21J10 from 7, comp... 38 8.6
26emb|AL590684.12| Human DNA sequence from clone RP11-168K19 on ch... 38 8.6
27emb|BX323016.9| Zebrafish DNA sequence from clone CH211-273L18 i... 38 8.6
28gb|AC183299.2| Pan troglodytes BAC clone CH251-263C8 from chromo... 38 8.6
29gb|AF356843.1| Plodia interpunctella hexamerin storage protein P... 38 8.6
30gb|AC108064.3| Homo sapiens BAC clone RP11-485C11 from 4, comple... 38 8.6
31gb|AC008588.8| Homo sapiens chromosome 5 clone CTC-573M9, comple... 38 8.6
32gb|AC090120.8| Oryza sativa chromosome 10 BAC OSJNBb0049A16 geno... 38 8.6
33gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 38 8.6
34emb|BX936188.2| Gallus gallus finished cDNA, clone ChEST146h1 38 8.6
35dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.6
36dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.6
37emb|BX950778.1| Gallus gallus finished cDNA, clone ChEST719b15 38 8.6
38gb|AC102703.16| Mus musculus chromosome 1, clone RP24-442E5, com... 38 8.6
39gb|AC079284.4|AC079284 Arabidopsis thaliana chromosome 1 BAC F8A... 38 8.6
40gb|AC069451.11|AC069451 Mus musculus BAC MGS3-404F4 (Genome Sys... 38 8.6
41emb|BX931355.1| Gallus gallus finished cDNA, clone ChEST337k5 38 8.6
42emb|BX931740.1| Gallus gallus finished cDNA, clone ChEST738f1 38 8.6
43dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.6
44dbj|AK120659.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.6
45dbj|AK110291.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.6
46gb|AF127485.1|MMC3HUBE4 Mus musculus ubiquitin activating enzyme... 38 8.6
47gb|AC007585.15|AC007585 Mus musculus BAC GSMB-250J8 (Genome Sys... 38 8.6
48emb|BX629354.1|CNS09SBQ Tetraodon nigroviridis BAC sequence 38 8.6
49dbj|AP001674.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 8.6
50gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome 38 8.6
51gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 38 8.6
52emb|AL683880.7| Mouse DNA sequence from clone RP23-124M9 on chro... 38 8.6
53dbj|AP001538.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 38 8.6 
>emb|AL161550.2|ATCHRIV50 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 50
          Length = 199382

 Score = 42.1 bits (21), Expect = 0.55
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 82     cttccacaacttaaaaaagta 102
              |||||||||||||||||||||
Sbjct: 179342 cttccacaacttaaaaaagta 179322
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>emb|AL022580.1|ATT5K18 Arabidopsis thaliana DNA chromosome 4, BAC clone T5K18 (ESSA project)
          Length = 90551

 Score = 42.1 bits (21), Expect = 0.55
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    cttccacaacttaaaaaagta 102
             |||||||||||||||||||||
Sbjct: 73291 cttccacaacttaaaaaagta 73271
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>gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, complete sequence
          Length = 210751

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 132   attttgtaataacatgtaaaaccccaag 159
             ||||||| |||||||||||| |||||||
Sbjct: 73913 attttgtgataacatgtaaagccccaag 73940
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>gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete sequence
          Length = 141672

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    cttccacaacttaaaaaagtaaaa 105
             ||||||||| ||||||||||||||
Sbjct: 61353 cttccacaaattaaaaaagtaaaa 61330
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>emb|AL023713.1|HS324L9 Human DNA sequence from clone RP3-324L9 on chromosome 6p22.3-23,
             complete sequence
          Length = 73427

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     ctaatatgattatcccctcc 26
             ||||||||||||||||||||
Sbjct: 32952 ctaatatgattatcccctcc 32933
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>gb|AC034268.4| Homo sapiens chromosome 17, clone RP11-312B18, complete sequence
          Length = 198935

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    tacagcatccttccacaact 92
             ||||||||||||||||||||
Sbjct: 88100 tacagcatccttccacaact 88119
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>gb|AC012173.9| Homo sapiens chromosome 16 clone RP11-152P23, complete sequence
          Length = 74925

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    tattacagcatccttccaca 89
             ||||||||||||||||||||
Sbjct: 10540 tattacagcatccttccaca 10559
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>gb|AC084193.5| Homo sapiens BAC clone RP11-545M11 from 2, complete sequence
          Length = 185671

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     ccacaacttaaaaaagtaaa 104
              ||||||||||||||||||||
Sbjct: 103589 ccacaacttaaaaaagtaaa 103570
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>gb|AC155278.5| Mus musculus 6 BAC RP24-141E2 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 202028

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     ttccacaacttaaaaaagta 102
              ||||||||||||||||||||
Sbjct: 101014 ttccacaacttaaaaaagta 100995
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>gb|AC004050.1|AC004050 Homo sapiens chromosome 4 clone B207D4 map 4q25, complete sequence
          Length = 127098

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   accattttgtaataacatgt 148
             ||||||||||||||||||||
Sbjct: 16849 accattttgtaataacatgt 16830
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>gb|AF020713.1|AF020713 Bacteriophage SPBc2 complete genome
          Length = 134416

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    gaacaacacaacgctaccaa 66
             ||||||||||||||||||||
Sbjct: 10537 gaacaacacaacgctaccaa 10556
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>emb|Z99115.2|BSUB0012 Bacillus subtilis complete genome (section 12 of 21): from 2207806 to
             2409180
          Length = 201375

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    gaacaacacaacgctaccaa 66
             ||||||||||||||||||||
Sbjct: 67303 gaacaacacaacgctaccaa 67284
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>ref|NM_192751.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2403

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 72   ttacagcatccttccacaa 90
            |||||||||||||||||||
Sbjct: 1117 ttacagcatccttccacaa 1099
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>gb|AC005723.1| Homo sapiens chromosome 5, BAC clone 194j15 (LBNL H137) - BAC clone
             35G8 (LBNL H138) - BAC clone 194o13 (LBNL H106),  complete
             sequence
          Length = 127766

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 139   aataacatgtaaaacccca 157
             |||||||||||||||||||
Sbjct: 94747 aataacatgtaaaacccca 94765
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>ref|XM_424637.1| PREDICTED: Gallus gallus similar to MGC53772 protein (LOC427039),
           partial mRNA
          Length = 597

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 98  aagtaaaaggttcgttcca 116
           |||||||||||||||||||
Sbjct: 468 aagtaaaaggttcgttcca 450
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>gb|AC134433.3| Mus musculus BAC clone RP24-405A4 from chromosome Y, complete sequence
          Length = 124148

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 140   ataacatgtaaaaccccaa 158
             |||||||||||||||||||
Sbjct: 23377 ataacatgtaaaaccccaa 23359
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>gb|AC145377.2| Pan troglodytes BAC clone RP43-11P19 from 7, complete sequence
          Length = 194463

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 87    acaacttaaaaaagtaaaa 105
             |||||||||||||||||||
Sbjct: 12391 acaacttaaaaaagtaaaa 12409
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>gb|AC125379.4| Mus musculus BAC clone RP23-53B19 from chromosome 12, complete sequence
          Length = 225930

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 54     acaacgctaccaatattat 72
              |||||||||||||||||||
Sbjct: 139282 acaacgctaccaatattat 139300
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>gb|AY811778.1| Schistosoma japonicum SJCHGC03744 protein mRNA, partial cds
          Length = 501

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 24 tccctgagtacaatgcatt 42
          |||||||||||||||||||
Sbjct: 23 tccctgagtacaatgcatt 5
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>gb|AC139318.5| Mus musculus BAC clone RP24-498K8 from chromosome Y, complete sequence
          Length = 194810

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 140    ataacatgtaaaaccccaa 158
              |||||||||||||||||||
Sbjct: 163645 ataacatgtaaaaccccaa 163627



 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 140   ataacatgtaaaaccccaa 158
             |||||||||||||||||||
Sbjct: 28545 ataacatgtaaaaccccaa 28563
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>gb|AC146481.2| Oryza sativa chromosome 10  B1288B10 genomic sequence, complete
             sequence
          Length = 58734

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 30    agtacaatgcatttgtcgaacaa 52
             ||||||||||||||||| |||||
Sbjct: 18664 agtacaatgcatttgtccaacaa 18642
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>gb|AC140283.3| Mus musculus BAC clone RP24-510I14 from chromosome 18, complete sequence
          Length = 149264

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 90     acttaaaaaagtaaaaggttcgt 112
              ||||||||||||||||| |||||
Sbjct: 102349 acttaaaaaagtaaaagcttcgt 102371
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>gb|AC110534.11| Mus musculus chromosome 17, clone RP23-174D11, complete sequence
          Length = 174600

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 59    gctaccaatattattacagcatc 81
             |||||||||||||||||| ||||
Sbjct: 84134 gctaccaatattattacatcatc 84156
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>gb|AC010991.4| Homo sapiens BAC clone CTD-3065P21 from 7, complete sequence
          Length = 52813

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 87   acaacttaaaaaagtaaaa 105
            |||||||||||||||||||
Sbjct: 5818 acaacttaaaaaagtaaaa 5836
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>gb|AC145518.1| Pan troglodytes BAC clone RP43-21J10 from 7, complete sequence
          Length = 178086

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 87    acaacttaaaaaagtaaaa 105
             |||||||||||||||||||
Sbjct: 73940 acaacttaaaaaagtaaaa 73922
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>emb|AL590684.12| Human DNA sequence from clone RP11-168K19 on chromosome 6 Contains
            the 5' end of a novel gene, complete sequence
          Length = 24401

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 131  cattttgtaataacatgta 149
            |||||||||||||||||||
Sbjct: 7154 cattttgtaataacatgta 7172
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>emb|BX323016.9| Zebrafish DNA sequence from clone CH211-273L18 in linkage group 6,
            complete sequence
          Length = 45653

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 88   caacttaaaaaagtaaaag 106
            |||||||||||||||||||
Sbjct: 8085 caacttaaaaaagtaaaag 8067
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>gb|AC183299.2| Pan troglodytes BAC clone CH251-263C8 from chromosome 17, complete
             sequence
          Length = 170313

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 73    tacagcatccttccacaac 91
             |||||||||||||||||||
Sbjct: 76546 tacagcatccttccacaac 76528
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>gb|AF356843.1| Plodia interpunctella hexamerin storage protein PinSP2 mRNA,
           complete cds
          Length = 2336

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 36  atgcatttgtcgaacaaca 54
           |||||||||||||||||||
Sbjct: 912 atgcatttgtcgaacaaca 894
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>gb|AC108064.3| Homo sapiens BAC clone RP11-485C11 from 4, complete sequence
          Length = 104623

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 132   attttgtaataacatgtaa 150
             |||||||||||||||||||
Sbjct: 60096 attttgtaataacatgtaa 60078
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>gb|AC008588.8| Homo sapiens chromosome 5 clone CTC-573M9, complete sequence
          Length = 213167

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 139    aataacatgtaaaacccca 157
              |||||||||||||||||||
Sbjct: 127991 aataacatgtaaaacccca 128009
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>gb|AC090120.8| Oryza sativa chromosome 10 BAC OSJNBb0049A16 genomic sequence, complete
             sequence
          Length = 129585

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 30    agtacaatgcatttgtcgaacaa 52
             ||||||||||||||||| |||||
Sbjct: 14502 agtacaatgcatttgtccaacaa 14524
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>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 94      aaaaaagtaaaaggttcgttcca 116
               ||||||||||||||| |||||||
Sbjct: 2739877 aaaaaagtaaaaggtgcgttcca 2739855
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>emb|BX936188.2| Gallus gallus finished cDNA, clone ChEST146h1
          Length = 1382

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 98  aagtaaaaggttcgttcca 116
           |||||||||||||||||||
Sbjct: 226 aagtaaaaggttcgttcca 208
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 30       agtacaatgcatttgtcgaacaa 52
                ||||||||||||||||| |||||
Sbjct: 18046531 agtacaatgcatttgtccaacaa 18046509
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 72       ttacagcatccttccacaa 90
                |||||||||||||||||||
Sbjct: 24240126 ttacagcatccttccacaa 24240144
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>emb|BX950778.1| Gallus gallus finished cDNA, clone ChEST719b15
          Length = 1401

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 98  aagtaaaaggttcgttcca 116
           |||||||||||||||||||
Sbjct: 245 aagtaaaaggttcgttcca 227
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>gb|AC102703.16| Mus musculus chromosome 1, clone RP24-442E5, complete sequence
          Length = 197439

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 48     aacaacacaacgctaccaa 66
              |||||||||||||||||||
Sbjct: 132281 aacaacacaacgctaccaa 132299
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>gb|AC079284.4|AC079284 Arabidopsis thaliana chromosome 1 BAC F8A12 genomic sequence, complete
             sequence
          Length = 105445

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 89    aacttaaaaaagtaaaagg 107
             |||||||||||||||||||
Sbjct: 81144 aacttaaaaaagtaaaagg 81126
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>gb|AC069451.11|AC069451 Mus musculus  BAC MGS3-404F4 (Genome Systems Mouse BAC Library)
             complete sequence
          Length = 122914

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 140   ataacatgtaaaaccccaa 158
             |||||||||||||||||||
Sbjct: 99175 ataacatgtaaaaccccaa 99157
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>emb|BX931355.1| Gallus gallus finished cDNA, clone ChEST337k5
          Length = 1394

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 98  aagtaaaaggttcgttcca 116
           |||||||||||||||||||
Sbjct: 238 aagtaaaaggttcgttcca 220
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>emb|BX931740.1| Gallus gallus finished cDNA, clone ChEST738f1
          Length = 889

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 98  aagtaaaaggttcgttcca 116
           |||||||||||||||||||
Sbjct: 230 aagtaaaaggttcgttcca 212
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>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0046B10
          Length = 142596

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 72    ttacagcatccttccacaa 90
             |||||||||||||||||||
Sbjct: 64690 ttacagcatccttccacaa 64708
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>dbj|AK120659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158F03, full
            insert sequence
          Length = 3251

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 72   ttacagcatccttccacaa 90
            |||||||||||||||||||
Sbjct: 1217 ttacagcatccttccacaa 1199
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>dbj|AK110291.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-F12, full
            insert sequence
          Length = 2695

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 72   ttacagcatccttccacaa 90
            |||||||||||||||||||
Sbjct: 1138 ttacagcatccttccacaa 1120
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>gb|AF127485.1|MMC3HUBE4 Mus musculus ubiquitin activating enzyme E1 (Ube1y1) gene, exons 15
            and 16
          Length = 1184

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 140  ataacatgtaaaaccccaa 158
            |||||||||||||||||||
Sbjct: 1097 ataacatgtaaaaccccaa 1079
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>gb|AC007585.15|AC007585 Mus musculus  BAC GSMB-250J8 (Genome Systems Mouse BAC Library)
             complete sequence
          Length = 106482

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 140   ataacatgtaaaaccccaa 158
             |||||||||||||||||||
Sbjct: 23653 ataacatgtaaaaccccaa 23635
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>emb|BX629354.1|CNS09SBQ Tetraodon nigroviridis BAC sequence
          Length = 95048

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 87    acaacttaaaaaagtaaaa 105
             |||||||||||||||||||
Sbjct: 88795 acaacttaaaaaagtaaaa 88813
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>dbj|AP001674.1| Homo sapiens genomic DNA, chromosome 21q, section 18/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 94    aaaaaagtaaaaggttcgt 112
             |||||||||||||||||||
Sbjct: 68000 aaaaaagtaaaaggttcgt 68018
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>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome
          Length = 1698955

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 48     aacaacacaacgctaccaa 66
              |||||||||||||||||||
Sbjct: 771482 aacaacacaacgctaccaa 771464
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 30       agtacaatgcatttgtcgaacaa 52
                ||||||||||||||||| |||||
Sbjct: 18055784 agtacaatgcatttgtccaacaa 18055762
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>emb|AL683880.7| Mouse DNA sequence from clone RP23-124M9 on chromosome 4, complete
              sequence
          Length = 210306

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 135    ttgtaataacatgtaaaac 153
              |||||||||||||||||||
Sbjct: 105992 ttgtaataacatgtaaaac 105974
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>dbj|AP001538.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B853K11,
             LL56-APP region, complete sequence
          Length = 174019

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 94    aaaaaagtaaaaggttcgt 112
             |||||||||||||||||||
Sbjct: 76789 aaaaaagtaaaaggttcgt 76807


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,925,602
Number of Sequences: 3902068
Number of extensions: 1925602
Number of successful extensions: 139638
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139361
Number of HSP's gapped (non-prelim): 277
length of query: 175
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 153
effective length of database: 17,147,199,772
effective search space: 2623521565116
effective search space used: 2623521565116
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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