ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast48h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF043091.1|AF043091 Hordeum vulgare dehydrin 6 (dhn6) gene, c... 248 4e-63
2gb|AF181456.1|AF181456 Hordeum vulgare dehydrin (Dhn6) mRNA, com... 168 3e-39
3emb|AL137250.17| Human DNA sequence from clone RP11-347L8 on chr... 46 0.031
4emb|AL035401.23|HS209A6 Human DNA sequence from clone RP1-209A6 ... 46 0.031
5gb|AC118610.9| Mus musculus chromosome 6, clone RP23-178I17, com... 40 1.9
6gb|AC121356.10| Mus musculus chromosome 6, clone RP23-52D17, com... 40 1.9
7gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete se... 40 1.9
8gb|AC144931.29| Medicago truncatula clone mth2-22b18, complete s... 40 1.9
9gb|AC126007.16| Medicago truncatula clone mth2-11o4, complete se... 40 1.9
10gb|AC170800.5| Medicago truncatula clone mth2-32n7, complete seq... 40 1.9
11gb|AC142094.12| Medicago truncatula clone mth2-34h6, complete se... 40 1.9
12dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 40 1.9
13emb|BX000479.11| Mouse DNA sequence from clone RP23-139I16 on ch... 40 1.9
14dbj|AP004520.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 1.9
15gb|DQ145752.1| Streptococcus ratti two-component lantibiotic gen... 38 7.4
16gb|AC159286.3| Mus musculus BAC clone RP23-314E22 from chromosom... 38 7.4
17gb|AF411059.1| Homo sapiens clone BAC_22608 inducible T-cell co-... 38 7.4
18gb|AC099020.2| Drosophila melanogaster clone BACR30H01, complete... 38 7.4
19ref|NM_022080.1| Homo sapiens N-ethylmaleimide-sensitive factor ... 38 7.4
20emb|CR545479.12| Zebrafish DNA sequence from clone CH211-219M24 ... 38 7.4
21gb|AC121257.6| Mus musculus chromosome 14, clone RP24-202E4, com... 38 7.4
22ref|XM_724802.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 38 7.4
23ref|XM_725443.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 38 7.4
24gb|DQ148046.1| Macaca mulatta clone ds2_o02_t7_202 N-ethylmaleim... 38 7.4
25gb|BC047426.1| Homo sapiens N-ethylmaleimide-sensitive factor at... 38 7.4
26emb|BX649215.1| Human DNA sequence from clone RP11-575L16 on chr... 38 7.4
27emb|AL645992.9| Human DNA sequence from clone RP11-163M19 on chr... 38 7.4
28emb|AL590138.7| Human DNA sequence from clone RP11-243A2 on chro... 38 7.4
29emb|AL356056.22| Human DNA sequence from clone RP11-38L15 on chr... 38 7.4
30emb|AL356102.13| Human DNA sequence from clone RP11-490P13 on ch... 38 7.4
31emb|AL354976.11| Human DNA sequence from clone RP11-20I6 on chro... 38 7.4
32emb|AL096677.21|HSJ322G13 Human DNA sequence from clone RP3-322G... 38 7.4
33gb|BC060840.1| Homo sapiens N-ethylmaleimide-sensitive factor at... 38 7.4
34emb|AL834445.1|HSM805543 Homo sapiens mRNA; cDNA DKFZp761J109 (f... 38 7.4
35emb|AL513383.1|STYPPHCM1 Salmonella enterica subsp. enterica ser... 38 7.4
36gb|BC026310.1| Homo sapiens cDNA clone MGC:26066 IMAGE:4798085, ... 38 7.4
37gb|AC150243.3| Rhinolophus ferrumequinum clone VMRC7-394F3, comp... 38 7.4
38gb|AC117482.4| Homo sapiens 3 BAC RP11-651J20 (Roswell Park Canc... 38 7.4
39dbj|AK126340.1| Homo sapiens cDNA FLJ44368 fis, clone TRACH30087... 38 7.4
40dbj|AK125811.1| Homo sapiens cDNA FLJ43823 fis, clone TESTI40024... 38 7.4
41dbj|AK124876.1| Homo sapiens cDNA FLJ42886 fis, clone BRHIP30076... 38 7.4
42dbj|AK022817.1| Homo sapiens cDNA FLJ12755 fis, clone NT2RP20012... 38 7.4
43gb|AF250878.1| Salmonella typhi R27 plasmid complete sequence 38 7.4
44gb|AC109473.2| Homo sapiens chromosome 5 clone RP11-3B10, comple... 38 7.4
45ref|NM_134291.3| Drosophila melanogaster spitz CG10334-RA, trans... 38 7.4
46ref|NM_057561.4| Drosophila melanogaster spitz CG10334-RF, trans... 38 7.4
47gb|AY089693.1| Drosophila melanogaster RH69567 full insert cDNA 38 7.4
48gb|AC022432.5| Homo sapiens chromosome 19 clone CTD-3030D20, com... 38 7.4
49gb|AF126106.1|AF126106 Lupinus luteus mitotic cyclin B1-2 (CycB1... 38 7.4
50gb|AC157557.5| Mus musculus chromosome 7, clone RP24-369M22, com... 38 7.4
51gb|AC008575.7| Homo sapiens chromosome 5 clone CTC-554D6, comple... 38 7.4
52gb|AC079463.3|AC079463 Homo sapiens chromosome 5 clone CTB-123N6... 38 7.4
53gb|AC008226.10|AC008226 Drosophila melanogaster, chromosome 3R, ... 38 7.4
54gb|AC008312.4|AC008312 Drosophila melanogaster, chromosome 3R, r... 38 7.4
55gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 38 7.4
56gb|AC155722.9| Mus musculus 6 BAC RP24-204J8 (Roswell Park Cance... 38 7.4
57gb|AC009965.9| Homo sapiens BAC clone RP11-388A17 from 2, comple... 38 7.4
58dbj|AB179778.1| Streptococcus mutans smbM1, smbF, smbT, smbM2, s... 38 7.4
59emb|BX004790.9| Zebrafish DNA sequence from clone CH211-215J7 in... 38 7.4
60emb|AJ535718.1|HSA535718 Homo sapiens partial ICOS gene for indu... 38 7.4
61emb|BX648330.1|HSM808478 Homo sapiens mRNA; cDNA DKFZp686E22156 ... 38 7.4
62gb|AE003671.4| Drosophila melanogaster chromosome 3R, section 13... 38 7.4
63gb|AE003663.4| Drosophila melanogaster chromosome 2L, section 72... 38 7.4
64gb|AC006485.1|AC006485 Homo sapiens chromosome 19, cosmid R29882... 38 7.4
65gb|AC005128.1|AC005128 Drosophila melanogaster, chromosome 2L, r... 38 7.4
66emb|BX005049.6| Zebrafish DNA sequence from clone DKEY-89O18 in ... 38 7.4
67emb|BX927330.9| Zebrafish DNA sequence from clone DKEY-43B14 in ... 38 7.4
68gb|AC153592.3| Mus musculus 6 BAC RP23-20C15 (Roswell Park Cance... 38 7.4
69gb|AC099643.5| Mus musculus chromosome 7, clone RP24-350G1, comp... 38 7.4
70dbj|AP004923.1| Lotus japonicus genomic DNA, chromosome 1, clone... 38 7.4
71emb|AL840626.7| Mouse DNA sequence from clone RP23-151M8 on chro... 38 7.4
72gb|AC136500.1| Homo sapiens chromosome 5 clone RP11-56P2, comple... 38 7.4 
>gb|AF043091.1|AF043091 Hordeum vulgare dehydrin 6 (dhn6) gene, complete cds
          Length = 3086

 Score =  248 bits (125), Expect = 4e-63
 Identities = 147/153 (96%), Gaps = 1/153 (0%)
 Strand = Plus / Minus

                                                                        
Query: 4    atccaaacaggccaaaaaagtgcaaaccgaccagacaaactacttaaaaccaggccatgt 63
            ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 2600 atccaaacaggccaaaaaagtgcaaaccgaccagacaaactacatagaaccaggccatgt 2541

                                                                        
Query: 64   cacagtactgcaacatttatcacacggtaaaagaaagatactat-aaaaatttaatacta 122
            |||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 2540 cacagtactgcaacatctatcacacggtaaaagaaagatactataaaaaacttaatacta 2481

                                             
Query: 123  tgcctttgattgcacacacgggggttcctcgag 155
            ||||||||||||||||||||| |||||||||||
Sbjct: 2480 tgcctttgattgcacacacggcggttcctcgag 2448



 Score = 50.1 bits (25), Expect = 0.002
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 4    atccaaacaggccaaaaaagtgcaa 28
            |||||||||||||||||||||||||
Sbjct: 2637 atccaaacaggccaaaaaagtgcaa 2613
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>gb|AF181456.1|AF181456 Hordeum vulgare dehydrin (Dhn6) mRNA, complete cds
          Length = 1637

 Score =  168 bits (85), Expect = 3e-39
 Identities = 101/105 (96%), Gaps = 1/105 (0%)
 Strand = Plus / Minus

                                                                        
Query: 52   accaggccatgtcacagtactgcaacatttatcacacggtaaaagaaagatactat-aaa 110
            |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 1637 accaggccatgtcacagtactgcaacatctatcacacggtaaaagaaagatactataaaa 1578

                                                         
Query: 111  aatttaatactatgcctttgattgcacacacgggggttcctcgag 155
            || |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1577 aacttaatactatgcctttgattgcacacacggtggttcctcgag 1533
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>emb|AL137250.17| Human DNA sequence from clone RP11-347L8 on chromosome 13, complete
             sequence
          Length = 110733

 Score = 46.1 bits (23), Expect = 0.031
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 91    taaaagaaagatactataaaaat 113
             |||||||||||||||||||||||
Sbjct: 81426 taaaagaaagatactataaaaat 81404
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>emb|AL035401.23|HS209A6 Human DNA sequence from clone RP1-209A6 on chromosome 6p22.1-24.3
             Contains part of a novel gene, complete sequence
          Length = 105960

 Score = 46.1 bits (23), Expect = 0.031
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 107   taaaaatttaatactatgccttt 129
             |||||||||||||||||||||||
Sbjct: 14306 taaaaatttaatactatgccttt 14284
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>gb|AC118610.9| Mus musculus chromosome 6, clone RP23-178I17, complete sequence
          Length = 255673

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    tataaaaatttaatactatg 124
              ||||||||||||||||||||
Sbjct: 220731 tataaaaatttaatactatg 220750
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>gb|AC121356.10| Mus musculus chromosome 6, clone RP23-52D17, complete sequence
          Length = 178055

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    tataaaaatttaatactatg 124
              ||||||||||||||||||||
Sbjct: 174214 tataaaaatttaatactatg 174195
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>gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete sequence
          Length = 107448

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 92    aaaagaaagatactataaaaatttaata 119
             |||||||||||| ||||||||| |||||
Sbjct: 43649 aaaagaaagataatataaaaatctaata 43622
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>gb|AC144931.29| Medicago truncatula clone mth2-22b18, complete sequence
          Length = 122819

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 92    aaaagaaagatactataaaaatttaata 119
             |||||||||||| ||||||||| |||||
Sbjct: 15183 aaaagaaagataatataaaaatctaata 15156
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>gb|AC126007.16| Medicago truncatula clone mth2-11o4, complete sequence
          Length = 106747

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   ttaatactatgcctttgatt 133
             ||||||||||||||||||||
Sbjct: 47006 ttaatactatgcctttgatt 46987
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>gb|AC170800.5| Medicago truncatula clone mth2-32n7, complete sequence
          Length = 99712

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 92    aaaagaaagatactataaaaatttaata 119
             |||||||||||| ||||||||| |||||
Sbjct: 33166 aaaagaaagataatataaaaatctaata 33139
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>gb|AC142094.12| Medicago truncatula clone mth2-34h6, complete sequence
          Length = 151594

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 92     aaaagaaagatactataaaaatttaata 119
              |||||||||||| ||||||||| |||||
Sbjct: 136412 aaaagaaagataatataaaaatctaata 136439
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>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    aagaaagatactataaaaat 113
             ||||||||||||||||||||
Sbjct: 41398 aagaaagatactataaaaat 41379
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>emb|BX000479.11| Mouse DNA sequence from clone RP23-139I16 on chromosome X, complete
             sequence
          Length = 145084

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 93    aaagaaagatactataaaaattta 116
             ||||||||||| ||||||||||||
Sbjct: 28682 aaagaaagatattataaaaattta 28705
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>dbj|AP004520.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT05P01, TM0048,
             complete sequence
          Length = 110811

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ataaaaatttaatactatgc 125
             ||||||||||||||||||||
Sbjct: 14849 ataaaaatttaatactatgc 14868
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>gb|DQ145752.1| Streptococcus ratti two-component lantibiotic gene locus, complete
            sequence
          Length = 11249

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 103  actataaaaatttaatact 121
            |||||||||||||||||||
Sbjct: 8754 actataaaaatttaatact 8772
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>gb|AC159286.3| Mus musculus BAC clone RP23-314E22 from chromosome 14, complete sequence
          Length = 210984

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 101    atactataaaaatttaata 119
              |||||||||||||||||||
Sbjct: 180768 atactataaaaatttaata 180786
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>gb|AF411059.1| Homo sapiens clone BAC_22608 inducible T-cell co-stimulator (ICOS) gene,
              complete cds; and endogenous virus HERV-H, complete
              sequence
          Length = 147538

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 101    atactataaaaatttaata 119
              |||||||||||||||||||
Sbjct: 102425 atactataaaaatttaata 102407
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>gb|AC099020.2| Drosophila melanogaster clone BACR30H01, complete sequence
          Length = 155557

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 8      aaacaggccaaaaaagtgc 26
              |||||||||||||||||||
Sbjct: 106771 aaacaggccaaaaaagtgc 106789
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>ref|NM_022080.1| Homo sapiens N-ethylmaleimide-sensitive factor attachment protein,
            beta (NAPB), mRNA
          Length = 3798

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 38   acaaactacttaaaaccag 56
            |||||||||||||||||||
Sbjct: 2897 acaaactacttaaaaccag 2879
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>emb|CR545479.12| Zebrafish DNA sequence from clone CH211-219M24 in linkage group 17,
             complete sequence
          Length = 188250

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 59    catgtcacagtactgcaacattt 81
             |||||||||| ||||||||||||
Sbjct: 51765 catgtcacagcactgcaacattt 51743
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>gb|AC121257.6| Mus musculus chromosome 14, clone RP24-202E4, complete sequence
          Length = 188883

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 101   atactataaaaatttaata 119
             |||||||||||||||||||
Sbjct: 64184 atactataaaaatttaata 64166
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>ref|XM_724802.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02042)
           partial mRNA
          Length = 1146

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  gaaagatactataaaaatt 114
           |||||||||||||||||||
Sbjct: 822 gaaagatactataaaaatt 840
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>ref|XM_725443.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02629)
           partial mRNA
          Length = 987

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  gaaagatactataaaaatt 114
           |||||||||||||||||||
Sbjct: 747 gaaagatactataaaaatt 765
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>gb|DQ148046.1| Macaca mulatta clone ds2_o02_t7_202 N-ethylmaleimide-sensitive
           factor attachment protein, beta (NAPB) mRNA, 3' UTR
          Length = 468

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 38  acaaactacttaaaaccag 56
           |||||||||||||||||||
Sbjct: 170 acaaactacttaaaaccag 152
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>gb|BC047426.1| Homo sapiens N-ethylmaleimide-sensitive factor attachment protein,
            beta, mRNA (cDNA clone MGC:48335 IMAGE:5294916), complete
            cds
          Length = 3769

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 38   acaaactacttaaaaccag 56
            |||||||||||||||||||
Sbjct: 2867 acaaactacttaaaaccag 2849
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>emb|BX649215.1| Human DNA sequence from clone RP11-575L16 on chromosome 10 Contains a
             novel pseudogene (FLJ12916) (MGC5560), a Ras homolog
             enriched in brain (RHEB) pseudogene and a CpG island,
             complete sequence
          Length = 77278

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 101   atactataaaaatttaatactat 123
             ||||||||||||||| |||||||
Sbjct: 54860 atactataaaaatttcatactat 54882
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>emb|AL645992.9| Human DNA sequence from clone RP11-163M19 on chromosome 10 Contains a
             novel gene (novel protein (FLJ12916), complete sequence
          Length = 48723

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 101   atactataaaaatttaatactat 123
             ||||||||||||||| |||||||
Sbjct: 30142 atactataaaaatttcatactat 30164
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>emb|AL590138.7| Human DNA sequence from clone RP11-243A2 on chromosome 1 Contains part
             of the PLXNA2 gene for plexin A2, complete sequence
          Length = 164057

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 96    gaaagatactataaaaatt 114
             |||||||||||||||||||
Sbjct: 56651 gaaagatactataaaaatt 56669
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>emb|AL356056.22| Human DNA sequence from clone RP11-38L15 on chromosome 10 Contains a gene
              for a protein similar to FLJ12916, two novel genes, the
              gene for synaptotagmin (CHR10SYT), a Ras homolog enriched
              in brain 2 (RHEB2) pseudogene, the 5' end of a novel gene
              (LOC142964) and two CpG islands, complete sequence
          Length = 183976

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 101    atactataaaaatttaatactat 123
              ||||||||||||||| |||||||
Sbjct: 112157 atactataaaaatttcatactat 112179
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>emb|AL356102.13| Human DNA sequence from clone RP11-490P13 on chromosome 13, complete
             sequence
          Length = 139035

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 97    aaagatactataaaaattt 115
             |||||||||||||||||||
Sbjct: 34080 aaagatactataaaaattt 34062
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>emb|AL354976.11| Human DNA sequence from clone RP11-20I6 on chromosome 10 Contains a CpG
             island, complete sequence
          Length = 127766

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 120   ctatgcctttgattgcaca 138
             |||||||||||||||||||
Sbjct: 61140 ctatgcctttgattgcaca 61158
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>emb|AL096677.21|HSJ322G13 Human DNA sequence from clone RP3-322G13 on chromosome 20p11.21-12.3
             Contains the gene for NTF2-related export protein (NXT1),
             the ZNF336 gene for zinc finger protein 336, two putative
             novel genes, the NAPB gene for N-ethylmaleimide-sensitive
             factor attachment protein beta, the CSTL1 gene for
             cystatin-like 1, the CST11 gene for cystatin 11 and six
             CpG islands, complete sequence
          Length = 112180

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    acaaactacttaaaaccag 56
             |||||||||||||||||||
Sbjct: 30630 acaaactacttaaaaccag 30648
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>gb|BC060840.1| Homo sapiens N-ethylmaleimide-sensitive factor attachment protein,
            beta, mRNA (cDNA clone MGC:71740 IMAGE:5284972), complete
            cds
          Length = 3798

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 38   acaaactacttaaaaccag 56
            |||||||||||||||||||
Sbjct: 2897 acaaactacttaaaaccag 2879
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>emb|AL834445.1|HSM805543 Homo sapiens mRNA; cDNA DKFZp761J109 (from clone DKFZp761J109)
          Length = 3299

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 38   acaaactacttaaaaccag 56
            |||||||||||||||||||
Sbjct: 2390 acaaactacttaaaaccag 2372
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>emb|AL513383.1|STYPPHCM1 Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1
          Length = 218160

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 14     gccaaaaaagtgcaaaccgaccagaca 40
              ||||||||||||||||| || ||||||
Sbjct: 135393 gccaaaaaagtgcaaacagatcagaca 135419
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>gb|BC026310.1| Homo sapiens cDNA clone MGC:26066 IMAGE:4798085, complete cds
          Length = 3249

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 38   acaaactacttaaaaccag 56
            |||||||||||||||||||
Sbjct: 2919 acaaactacttaaaaccag 2901
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>gb|AC150243.3| Rhinolophus ferrumequinum clone VMRC7-394F3, complete sequence
          Length = 110295

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 100   gatactataaaaatttaat 118
             |||||||||||||||||||
Sbjct: 63162 gatactataaaaatttaat 63180
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>gb|AC117482.4| Homo sapiens 3 BAC RP11-651J20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 171333

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 61    tgtcacagtactgcaacat 79
             |||||||||||||||||||
Sbjct: 28084 tgtcacagtactgcaacat 28066
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>dbj|AK126340.1| Homo sapiens cDNA FLJ44368 fis, clone TRACH3008713, highly  similar
            to Beta-soluble NSF attachment protein
          Length = 5211

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 38   acaaactacttaaaaccag 56
            |||||||||||||||||||
Sbjct: 4323 acaaactacttaaaaccag 4305
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>dbj|AK125811.1| Homo sapiens cDNA FLJ43823 fis, clone TESTI4002491, highly  similar
            to Beta-soluble NSF attachment protein
          Length = 4722

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 38   acaaactacttaaaaccag 56
            |||||||||||||||||||
Sbjct: 3833 acaaactacttaaaaccag 3815
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>dbj|AK124876.1| Homo sapiens cDNA FLJ42886 fis, clone BRHIP3007640, highly  similar
            to BETA-SOLUBLE NSF ATTACHMENT PROTEIN
          Length = 3802

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 38   acaaactacttaaaaccag 56
            |||||||||||||||||||
Sbjct: 2913 acaaactacttaaaaccag 2895
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>dbj|AK022817.1| Homo sapiens cDNA FLJ12755 fis, clone NT2RP2001290, highly similar to
            BETA-SOLUBLE NSF ATTACHMENT PROTEIN
          Length = 3382

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 38   acaaactacttaaaaccag 56
            |||||||||||||||||||
Sbjct: 2498 acaaactacttaaaaccag 2480
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>gb|AF250878.1| Salmonella typhi R27 plasmid complete sequence
          Length = 180461

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 14     gccaaaaaagtgcaaaccgaccagaca 40
              ||||||||||||||||| || ||||||
Sbjct: 144691 gccaaaaaagtgcaaacagatcagaca 144665
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>gb|AC109473.2| Homo sapiens chromosome 5 clone RP11-3B10, complete sequence
          Length = 170363

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 101   atactataaaaatttaatactat 123
             ||||||||||||||||| |||||
Sbjct: 52412 atactataaaaatttaaaactat 52390
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>ref|NM_134291.3| Drosophila melanogaster spitz CG10334-RA, transcript variant A
           (spi), mRNA
          Length = 1663

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 8   aaacaggccaaaaaagtgc 26
           |||||||||||||||||||
Sbjct: 96  aaacaggccaaaaaagtgc 114
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>ref|NM_057561.4| Drosophila melanogaster spitz CG10334-RF, transcript variant F
           (spi), mRNA
          Length = 1467

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 8   aaacaggccaaaaaagtgc 26
           |||||||||||||||||||
Sbjct: 96  aaacaggccaaaaaagtgc 114
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>gb|AY089693.1| Drosophila melanogaster RH69567 full insert cDNA
          Length = 1483

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 8   aaacaggccaaaaaagtgc 26
           |||||||||||||||||||
Sbjct: 97  aaacaggccaaaaaagtgc 115
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>gb|AC022432.5| Homo sapiens chromosome 19 clone CTD-3030D20, complete sequence
          Length = 102223

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 101   atactataaaaatttaata 119
             |||||||||||||||||||
Sbjct: 12168 atactataaaaatttaata 12150
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>gb|AF126106.1|AF126106 Lupinus luteus mitotic cyclin B1-2 (CycB1-2) gene, complete cds
          Length = 3291

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 101 atactataaaaatttaata 119
           |||||||||||||||||||
Sbjct: 248 atactataaaaatttaata 266
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>gb|AC157557.5| Mus musculus chromosome 7, clone RP24-369M22, complete sequence
          Length = 202543

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 95    agaaagatactataaaaat 113
             |||||||||||||||||||
Sbjct: 61994 agaaagatactataaaaat 61976
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>gb|AC008575.7| Homo sapiens chromosome 5 clone CTC-554D6, complete sequence
          Length = 168285

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 101   atactataaaaatttaatactat 123
             ||||||||||||||||| |||||
Sbjct: 35801 atactataaaaatttaaaactat 35823
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>gb|AC079463.3|AC079463 Homo sapiens chromosome 5 clone CTB-123N6, complete sequence
          Length = 106514

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 101   atactataaaaatttaatactat 123
             ||||||||||||||||| |||||
Sbjct: 68014 atactataaaaatttaaaactat 67992
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>gb|AC008226.10|AC008226 Drosophila melanogaster, chromosome 3R, region 84D-84D, BAC clone
              BACR02B19, complete sequence
          Length = 171286

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 119    actatgcctttgattgcac 137
              |||||||||||||||||||
Sbjct: 159173 actatgcctttgattgcac 159155
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>gb|AC008312.4|AC008312 Drosophila melanogaster, chromosome 3R, region 84D-84D, BAC clone
             BACR06G09, complete sequence
          Length = 188459

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 119   actatgcctttgattgcac 137
             |||||||||||||||||||
Sbjct: 76692 actatgcctttgattgcac 76674
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>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 100     gatactataaaaatttaat 118
               |||||||||||||||||||
Sbjct: 1155785 gatactataaaaatttaat 1155803
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>gb|AC155722.9| Mus musculus 6 BAC RP24-204J8 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 198481

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 34     ccagacaaactacttaaaa 52
              |||||||||||||||||||
Sbjct: 184541 ccagacaaactacttaaaa 184523
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>gb|AC009965.9| Homo sapiens BAC clone RP11-388A17 from 2, complete sequence
          Length = 181700

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 101    atactataaaaatttaata 119
              |||||||||||||||||||
Sbjct: 141996 atactataaaaatttaata 142014
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>dbj|AB179778.1| Streptococcus mutans smbM1, smbF, smbT, smbM2, smbG, smbA, smbB
            genes, complete cds
          Length = 11776

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 103  actataaaaatttaatact 121
            |||||||||||||||||||
Sbjct: 8795 actataaaaatttaatact 8813
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>emb|BX004790.9| Zebrafish DNA sequence from clone CH211-215J7 in linkage group 7,
              complete sequence
          Length = 209666

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 101    atactataaaaatttaata 119
              |||||||||||||||||||
Sbjct: 205844 atactataaaaatttaata 205862
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>emb|AJ535718.1|HSA535718 Homo sapiens partial ICOS gene for inducible costimulator protein
          Length = 186585

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 101   atactataaaaatttaata 119
             |||||||||||||||||||
Sbjct: 60903 atactataaaaatttaata 60885
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>emb|BX648330.1|HSM808478 Homo sapiens mRNA; cDNA DKFZp686E22156 (from clone DKFZp686E22156)
          Length = 2696

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 38   acaaactacttaaaaccag 56
            |||||||||||||||||||
Sbjct: 2454 acaaactacttaaaaccag 2436
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>gb|AE003671.4| Drosophila melanogaster chromosome 3R, section 13 of 118 of the
             complete sequence
          Length = 315844

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 119   actatgcctttgattgcac 137
             |||||||||||||||||||
Sbjct: 55634 actatgcctttgattgcac 55616
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>gb|AE003663.4| Drosophila melanogaster chromosome 2L, section 72 of 83 of the complete
              sequence
          Length = 290667

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 8      aaacaggccaaaaaagtgc 26
              |||||||||||||||||||
Sbjct: 135807 aaacaggccaaaaaagtgc 135789
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>gb|AC006485.1|AC006485 Homo sapiens chromosome 19, cosmid R29882, complete sequence
          Length = 38026

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 101   atactataaaaatttaata 119
             |||||||||||||||||||
Sbjct: 34832 atactataaaaatttaata 34814
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>gb|AC005128.1|AC005128 Drosophila melanogaster, chromosome 2L, region 37F1-37F6, P1 clone
             DS08491, complete sequence
          Length = 60040

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 8     aaacaggccaaaaaagtgc 26
             |||||||||||||||||||
Sbjct: 12084 aaacaggccaaaaaagtgc 12102
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>emb|BX005049.6| Zebrafish DNA sequence from clone DKEY-89O18 in linkage group 24,
              complete sequence
          Length = 251421

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 101    atactataaaaatttaata 119
              |||||||||||||||||||
Sbjct: 222471 atactataaaaatttaata 222453
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>emb|BX927330.9| Zebrafish DNA sequence from clone DKEY-43B14 in linkage group 2, complete
              sequence
          Length = 203149

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 102    tactataaaaatttaatac 120
              |||||||||||||||||||
Sbjct: 134104 tactataaaaatttaatac 134122



 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 102    tactataaaaatttaatac 120
              |||||||||||||||||||
Sbjct: 123729 tactataaaaatttaatac 123747
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>gb|AC153592.3| Mus musculus 6 BAC RP23-20C15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 195726

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 34     ccagacaaactacttaaaa 52
              |||||||||||||||||||
Sbjct: 174823 ccagacaaactacttaaaa 174841
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>gb|AC099643.5| Mus musculus chromosome 7, clone RP24-350G1, complete sequence
          Length = 139303

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 95    agaaagatactataaaaat 113
             |||||||||||||||||||
Sbjct: 45182 agaaagatactataaaaat 45164
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>dbj|AP004923.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT18O13, TM0078,
             complete sequence
          Length = 73758

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 105   tataaaaatttaatactat 123
             |||||||||||||||||||
Sbjct: 50339 tataaaaatttaatactat 50357
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>emb|AL840626.7| Mouse DNA sequence from clone RP23-151M8 on chromosome 2, complete
              sequence
          Length = 181014

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 96     gaaagatactataaaaatt 114
              |||||||||||||||||||
Sbjct: 156780 gaaagatactataaaaatt 156798
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>gb|AC136500.1| Homo sapiens chromosome 5 clone RP11-56P2, complete sequence
          Length = 183967

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 101   atactataaaaatttaatactat 123
             ||||||||||||||||| |||||
Sbjct: 42583 atactataaaaatttaaaactat 42561


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,694,531
Number of Sequences: 3902068
Number of extensions: 1694531
Number of successful extensions: 125350
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 125122
Number of HSP's gapped (non-prelim): 226
length of query: 155
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 133
effective length of database: 17,147,199,772
effective search space: 2280577569676
effective search space used: 2280577569676
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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