>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 193      cacaaaaccgaagtccaaaac 213
                |||||||||||||||||||||
Sbjct: 28255020 cacaaaaccgaagtccaaaac 28255000

>gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genomic sequence, complete
              sequence
          Length = 122497

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 193    cacaaaaccgaagtccaaaac 213
              |||||||||||||||||||||
Sbjct: 106161 cacaaaaccgaagtccaaaac 106141

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 193      cacaaaaccgaagtccaaaac 213
                |||||||||||||||||||||
Sbjct: 28346344 cacaaaaccgaagtccaaaac 28346324

>gb|AC154240.2| Mus musculus BAC clone RP24-170E23 from chromosome 12, complete sequence
          Length = 160191

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    tacagtacttaacacaaaac 200
              ||||||||||||||||||||
Sbjct: 129401 tacagtacttaacacaaaac 129382

>ref|XM_877006.1| PREDICTED: Bos taurus similar to Mucin-13 precursor (Down-regulated
            in colon cancer 1), transcript variant 4 (LOC511430),
            mRNA
          Length = 1751

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 48   cattgtaaatagtctcaacttcca 71
            |||||||||||||| |||||||||
Sbjct: 1004 cattgtaaatagtcacaacttcca 981

>ref|XM_588763.2| PREDICTED: Bos taurus similar to Mucin-13 precursor (Down-regulated
           in colon cancer 1), transcript variant 1 (LOC511430),
           mRNA
          Length = 1517

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 48  cattgtaaatagtctcaacttcca 71
           |||||||||||||| |||||||||
Sbjct: 770 cattgtaaatagtcacaacttcca 747

>ref|XM_865756.1| PREDICTED: Bos taurus similar to Mucin-13 precursor (Down-regulated
            in colon cancer 1), transcript variant 2 (LOC511430),
            mRNA
          Length = 2086

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 48   cattgtaaatagtctcaacttcca 71
            |||||||||||||| |||||||||
Sbjct: 1339 cattgtaaatagtcacaacttcca 1316

>ref|XM_876833.1| PREDICTED: Bos taurus similar to Mucin-13 precursor (Down-regulated
            in colon cancer 1), transcript variant 3 (LOC511430),
            mRNA
          Length = 1897

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 48   cattgtaaatagtctcaacttcca 71
            |||||||||||||| |||||||||
Sbjct: 1150 cattgtaaatagtcacaacttcca 1127

>gb|AC102792.7| Mus musculus chromosome 7, clone RP23-370I17, complete sequence
          Length = 215999

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   tgtaaatagtctcaacttcc 70
            ||||||||||||||||||||
Sbjct: 7099 tgtaaatagtctcaacttcc 7118

>gb|AC130661.14| Mus musculus chromosome 12, clone RP23-337K17, complete sequence
          Length = 199656

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    tacagtacttaacacaaaac 200
              ||||||||||||||||||||
Sbjct: 179469 tacagtacttaacacaaaac 179488

>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     aaggatcaaaatctaatcca 90
              ||||||||||||||||||||
Sbjct: 910934 aaggatcaaaatctaatcca 910953

>gb|AC161533.22| Mus musculus chromosome 3, clone RP23-55N2, complete sequence
          Length = 158774

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 135   gtaatcgataggtttaaaagctta 158
             |||||| |||||||||||||||||
Sbjct: 48671 gtaatctataggtttaaaagctta 48694

>emb|AL731838.19| Mouse DNA sequence from clone RP23-139O16 on chromosome X, complete
             sequence
          Length = 212472

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    gtaaatagtctcaacttcca 71
             ||||||||||||||||||||
Sbjct: 84848 gtaaatagtctcaacttcca 84867

>gb|AC110186.10| Mus musculus chromosome 7, clone RP24-503J9, complete sequence
          Length = 168058

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    tgtaaatagtctcaacttcc 70
             ||||||||||||||||||||
Sbjct: 13515 tgtaaatagtctcaacttcc 13496


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,866,390
Number of Sequences: 3902068
Number of extensions: 1866390
Number of successful extensions: 123988
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123848
Number of HSP's gapped (non-prelim): 140
length of query: 222
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 200
effective length of database: 17,147,199,772
effective search space: 3429439954400
effective search space used: 3429439954400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)