| Clone Name | rbast48b02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103710.1| Zea mays PCO123562 mRNA sequence Length = 770 Score = 172 bits (87), Expect = 5e-40 Identities = 143/161 (88%), Gaps = 3/161 (1%) Strand = Plus / Minus Query: 139 gccttcttgggggacttggcggccttcttgggcgacttgccctccttgggctcc---ttc 195 ||||||||||||||||||||||||||||||||||||||| ||||||||| | || ||| Sbjct: 560 gccttcttgggggacttggcggccttcttgggcgacttggcctccttggccgccgccttc 501 Query: 196 tccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcg 255 ||||| ||| ||||||| || ||||||||||||||||| || || ||||||||||| ||| Sbjct: 500 tccgcggtcttcttgggcaggagcaccgggttgatgttggggaggacgccgccgtgggcg 441 Query: 256 atggtgacgccggccagcagcctcccgagctcctggtcgtt 296 ||||||||||||| ||||||| | |||||||||| |||||| Sbjct: 440 atggtgacgccggacagcagcttgccgagctcctcgtcgtt 400
>gb|BT016569.1| Zea mays clone Contig402 mRNA sequence Length = 719 Score = 157 bits (79), Expect = 3e-35 Identities = 141/161 (87%), Gaps = 3/161 (1%) Strand = Plus / Minus Query: 139 gccttcttgggggacttggcggccttcttgggcgacttgccctccttgggctcc---ttc 195 ||||||||||||||||||| || ||||||||| |||||| ||||||||||| || ||| Sbjct: 560 gccttcttgggggacttggggggcttcttgggggacttggcctccttgggcgccgccttc 501 Query: 196 tccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcg 255 ||||| ||| ||||||| || ||||||||||||||||| || || ||||||||||| ||| Sbjct: 500 tccgcggtcttcttgggcaggagcaccgggttgatgttggggaggacgccgccgtgggcg 441 Query: 256 atggtgacgccggccagcagcctcccgagctcctggtcgtt 296 ||||||||||||| ||||||| | |||||||||| |||||| Sbjct: 440 atggtgacgccggacagcagcttgccgagctcctcgtcgtt 400
>ref|NM_193707.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 480 Score = 153 bits (77), Expect = 4e-34 Identities = 101/109 (92%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 412 ccttctccgccgtcttcttgggcagcagcaccgggttgatgttgggcagcacgcctccgt 353 Query: 251 gcgcgatggtgacgccggccagcagcctcccgagctcctggtcgttcct 299 |||||||||| ||||||||||||||| | |||||||||| ||||||||| Sbjct: 352 gcgcgatggtcacgccggccagcagcttgccgagctcctcgtcgttcct 304 Score = 60.0 bits (30), Expect = 5e-06 Identities = 47/52 (90%), Gaps = 3/52 (5%) Strand = Plus / Minus Query: 138 ggccttcttgggggacttggcggcc---ttcttgggcgacttgccctccttg 186 ||||||||||||||||||| ||||| ||||||||||||||| |||||||| Sbjct: 477 ggccttcttgggggacttgccggccgccttcttgggcgacttggcctccttg 426
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 153 bits (77), Expect = 4e-34 Identities = 101/109 (92%) Strand = Plus / Plus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 9471210 ccttctccgccgtcttcttgggcagcagcaccgggttgatgttgggcagcacgcctccgt 9471269 Query: 251 gcgcgatggtgacgccggccagcagcctcccgagctcctggtcgttcct 299 |||||||||| ||||||||||||||| | |||||||||| ||||||||| Sbjct: 9471270 gcgcgatggtcacgccggccagcagcttgccgagctcctcgtcgttcct 9471318 Score = 67.9 bits (34), Expect = 2e-08 Identities = 48/52 (92%), Gaps = 3/52 (5%) Strand = Plus / Plus Query: 138 ggccttcttgggggactt---ggcggccttcttgggcgacttgccctccttg 186 |||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 9471145 ggccttcttgggggacttcccggcggccttcttgggcgacttggcctccttg 9471196 Score = 46.1 bits (23), Expect = 0.070 Identities = 74/91 (81%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| ||||| ||| | | |||||| ||||||||||||||| ||||| |||||| Sbjct: 28998341 tcttgggaagcaggacctgctggatgttgggcagcacgccgccggcggcgatcgtgacgg 28998282 Query: 266 cggccagcagcctcccgagctcctggtcgtt 296 | |||||||||| | ||||||| |||||| Sbjct: 28998281 tgcccagcagcctgctcagctcctcgtcgtt 28998251 Score = 40.1 bits (20), Expect = 4.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 153 cttggcggccttcttgggcgacttgccctcct 184 ||||||| ||||||||||||||| || ||||| Sbjct: 10411003 cttggcgcccttcttgggcgactcgctctcct 10410972
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 153 bits (77), Expect = 4e-34 Identities = 101/109 (92%) Strand = Plus / Plus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 168610 ccttctccgccgtcttcttgggcagcagcaccgggttgatgttgggcagcacgcctccgt 168669 Query: 251 gcgcgatggtgacgccggccagcagcctcccgagctcctggtcgttcct 299 |||||||||| ||||||||||||||| | |||||||||| ||||||||| Sbjct: 168670 gcgcgatggtcacgccggccagcagcttgccgagctcctcgtcgttcct 168718 Score = 67.9 bits (34), Expect = 2e-08 Identities = 48/52 (92%), Gaps = 3/52 (5%) Strand = Plus / Plus Query: 138 ggccttcttgggggactt---ggcggccttcttgggcgacttgccctccttg 186 |||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 168545 ggccttcttgggggacttcccggcggccttcttgggcgacttggcctccttg 168596
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 153 bits (77), Expect = 4e-34 Identities = 101/109 (92%) Strand = Plus / Plus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 9469331 ccttctccgccgtcttcttgggcagcagcaccgggttgatgttgggcagcacgcctccgt 9469390 Query: 251 gcgcgatggtgacgccggccagcagcctcccgagctcctggtcgttcct 299 |||||||||| ||||||||||||||| | |||||||||| ||||||||| Sbjct: 9469391 gcgcgatggtcacgccggccagcagcttgccgagctcctcgtcgttcct 9469439 Score = 67.9 bits (34), Expect = 2e-08 Identities = 48/52 (92%), Gaps = 3/52 (5%) Strand = Plus / Plus Query: 138 ggccttcttgggggactt---ggcggccttcttgggcgacttgccctccttg 186 |||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 9469266 ggccttcttgggggacttcccggcggccttcttgggcgacttggcctccttg 9469317 Score = 46.1 bits (23), Expect = 0.070 Identities = 74/91 (81%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| ||||| ||| | | |||||| ||||||||||||||| ||||| |||||| Sbjct: 29089763 tcttgggaagcaggacctgctggatgttgggcagcacgccgccggcggcgatcgtgacgg 29089704 Query: 266 cggccagcagcctcccgagctcctggtcgtt 296 | |||||||||| | ||||||| |||||| Sbjct: 29089703 tgcccagcagcctgctcagctcctcgtcgtt 29089673 Score = 40.1 bits (20), Expect = 4.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 153 cttggcggccttcttgggcgacttgccctcct 184 ||||||| ||||||||||||||| || ||||| Sbjct: 10409104 cttggcgcccttcttgggcgactcgctctcct 10409073
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 153 bits (77), Expect = 4e-34 Identities = 101/109 (92%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 17417162 ccttctccgccgtcttcttgggcagcagcaccgggttgatgttgggcagcacgcctccgt 17417103 Query: 251 gcgcgatggtgacgccggccagcagcctcccgagctcctggtcgttcct 299 |||||||||| ||||||||||||||| | |||||||||| ||||||||| Sbjct: 17417102 gcgcgatggtcacgccggccagcagcttgccgagctcctcgtcgttcct 17417054 Score = 60.0 bits (30), Expect = 5e-06 Identities = 47/52 (90%), Gaps = 3/52 (5%) Strand = Plus / Minus Query: 138 ggccttcttgggggacttggcggcc---ttcttgggcgacttgccctccttg 186 ||||||||||||||||||| ||||| ||||||||||||||| |||||||| Sbjct: 17417227 ggccttcttgggggacttgccggccgccttcttgggcgacttggcctccttg 17417176 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 137 cggccttcttgggggacttggcgg 160 |||||||||||||||||||||||| Sbjct: 43063467 cggccttcttgggggacttggcgg 43063444
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0507H06 Length = 136351 Score = 153 bits (77), Expect = 4e-34 Identities = 101/109 (92%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 70554 ccttctccgccgtcttcttgggcagcagcaccgggttgatgttgggcagcacgcctccgt 70495 Query: 251 gcgcgatggtgacgccggccagcagcctcccgagctcctggtcgttcct 299 |||||||||| ||||||||||||||| | |||||||||| ||||||||| Sbjct: 70494 gcgcgatggtcacgccggccagcagcttgccgagctcctcgtcgttcct 70446 Score = 60.0 bits (30), Expect = 5e-06 Identities = 47/52 (90%), Gaps = 3/52 (5%) Strand = Plus / Minus Query: 138 ggccttcttgggggacttggcggcc---ttcttgggcgacttgccctccttg 186 ||||||||||||||||||| ||||| ||||||||||||||| |||||||| Sbjct: 70619 ggccttcttgggggacttgccggccgccttcttgggcgacttggcctccttg 70568
>dbj|AK121750.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087I02, full insert sequence Length = 754 Score = 153 bits (77), Expect = 4e-34 Identities = 101/109 (92%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 502 ccttctccgccgtcttcttgggcagcagcaccgggttgatgttgggcagcacgcctccgt 443 Query: 251 gcgcgatggtgacgccggccagcagcctcccgagctcctggtcgttcct 299 |||||||||| ||||||||||||||| | |||||||||| ||||||||| Sbjct: 442 gcgcgatggtcacgccggccagcagcttgccgagctcctcgtcgttcct 394 Score = 67.9 bits (34), Expect = 2e-08 Identities = 48/52 (92%), Gaps = 3/52 (5%) Strand = Plus / Minus Query: 138 ggccttcttgggggactt---ggcggccttcttgggcgacttgccctccttg 186 |||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 567 ggccttcttgggggacttcccggcggccttcttgggcgacttggcctccttg 516
>ref|XM_475374.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 492 Score = 149 bits (75), Expect = 7e-33 Identities = 87/91 (95%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 391 tcttggggagcagcaccgggttgatgttgggcagcaccccgccgtgcgcgatggtgacgc 332 Query: 266 cggccagcagcctcccgagctcctggtcgtt 296 ||||||||||| |||||||||||| |||||| Sbjct: 331 cggccagcagcttcccgagctcctcgtcgtt 301
>gb|AC108876.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1525_A02, complete sequence Length = 93826 Score = 149 bits (75), Expect = 7e-33 Identities = 87/91 (95%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 7379 tcttggggagcagcaccgggttgatgttgggcagcaccccgccgtgcgcgatggtgacgc 7438 Query: 266 cggccagcagcctcccgagctcctggtcgtt 296 ||||||||||| |||||||||||| |||||| Sbjct: 7439 cggccagcagcttcccgagctcctcgtcgtt 7469
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 149 bits (75), Expect = 7e-33 Identities = 87/91 (95%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 101736 tcttggggagcagcaccgggttgatgttgggcagcaccccgccgtgcgcgatggtgacgc 101795 Query: 266 cggccagcagcctcccgagctcctggtcgtt 296 ||||||||||| |||||||||||| |||||| Sbjct: 101796 cggccagcagcttcccgagctcctcgtcgtt 101826
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 149 bits (75), Expect = 7e-33 Identities = 87/91 (95%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 22512329 tcttggggagcagcaccgggttgatgttgggcagcaccccgccgtgcgcgatggtgacgc 22512388 Query: 266 cggccagcagcctcccgagctcctggtcgtt 296 ||||||||||| |||||||||||| |||||| Sbjct: 22512389 cggccagcagcttcccgagctcctcgtcgtt 22512419 Score = 147 bits (74), Expect = 3e-32 Identities = 98/106 (92%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 707417 ccttctccgcggtcttcttcgggagcagcaccgggttgatgttcggcagcacgccgccgt 707358 Query: 251 gcgcgatggtgacgccggccagcagcctcccgagctcctggtcgtt 296 ||||||||||||| ||||| |||||| |||||||||||| |||||| Sbjct: 707357 gcgcgatggtgaccccggcgagcagcttcccgagctcctcgtcgtt 707312
>dbj|AK099763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094K03, full insert sequence Length = 912 Score = 149 bits (75), Expect = 7e-33 Identities = 87/91 (95%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 461 tcttggggagcagcaccgggttgatgttgggcagcaccccgccgtgcgcgatggtgacgc 402 Query: 266 cggccagcagcctcccgagctcctggtcgtt 296 ||||||||||| |||||||||||| |||||| Sbjct: 401 cggccagcagcttcccgagctcctcgtcgtt 371
>dbj|AK067406.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099N23, full insert sequence Length = 1097 Score = 149 bits (75), Expect = 7e-33 Identities = 87/91 (95%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 462 tcttggggagcagcaccgggttgatgttgggcagcaccccgccgtgcgcgatggtgacgc 403 Query: 266 cggccagcagcctcccgagctcctggtcgtt 296 ||||||||||| |||||||||||| |||||| Sbjct: 402 cggccagcagcttcccgagctcctcgtcgtt 372
>ref|XM_475081.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 522 Score = 147 bits (74), Expect = 3e-32 Identities = 98/106 (92%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 454 ccttctccgcggtcttcttcgggagcagcaccgggttgatgttcggcagcacgccgccgt 395 Query: 251 gcgcgatggtgacgccggccagcagcctcccgagctcctggtcgtt 296 ||||||||||||| ||||| |||||| |||||||||||| |||||| Sbjct: 394 gcgcgatggtgaccccggcgagcagcttcccgagctcctcgtcgtt 349
>dbj|AK074018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075N03, full insert sequence Length = 797 Score = 147 bits (74), Expect = 3e-32 Identities = 98/106 (92%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 480 ccttctccgcggtcttcttcgggagcagcaccgggttgatgttcggcagcacgccgccgt 421 Query: 251 gcgcgatggtgacgccggccagcagcctcccgagctcctggtcgtt 296 ||||||||||||| ||||| |||||| |||||||||||| |||||| Sbjct: 420 gcgcgatggtgaccccggcgagcagcttcccgagctcctcgtcgtt 375
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 147 bits (74), Expect = 3e-32 Identities = 98/106 (92%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 52616 ccttctccgcggtcttcttcgggagcagcaccgggttgatgttcggcagcacgccgccgt 52557 Query: 251 gcgcgatggtgacgccggccagcagcctcccgagctcctggtcgtt 296 ||||||||||||| ||||| |||||| |||||||||||| |||||| Sbjct: 52556 gcgcgatggtgaccccggcgagcagcttcccgagctcctcgtcgtt 52511
>gb|BT019008.1| Zea mays clone Contig499.F mRNA sequence Length = 674 Score = 125 bits (63), Expect = 1e-25 Identities = 97/107 (90%), Gaps = 1/107 (0%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||||||||||| ||||||| ||||| |||||||||||||| |||| ||||||||||| Sbjct: 463 ccttctccgccgtcttcttgggcagcaggaccgggttgatgttgggcaacacgccgccgt 404 Query: 251 gcgcgatggtgacgccggccagcagcc-tcccgagctcctggtcgtt 296 | |||||||| ||||||| |||||||| |||||||||||| |||||| Sbjct: 403 gggcgatggtcacgccggtcagcagccttcccgagctcctcgtcgtt 357 Score = 87.7 bits (44), Expect = 2e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 139 gccttcttgggggacttggcggccttcttgggcgacttgccctccttg 186 ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 527 gccttcttgggggacttggcggccttcttgggcgacttggcctccttg 480
>gb|BT016301.1| Zea mays clone Contig134 mRNA sequence Length = 846 Score = 117 bits (59), Expect = 2e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||||| ||||||||||| ||||| || |||||||| ||||||||||||| Sbjct: 395 tcttggggagcagcacagggttgatgttgggcagaaccccgccgtgtgcgatggtgacgc 336 Query: 266 cggccagcagcctcccgagctcctggtcgtt 296 ||||||| ||| |||||||||||| |||||| Sbjct: 335 cggccagtagcttcccgagctcctcgtcgtt 305
>gb|AY103585.1| Zea mays PCO123564 mRNA sequence Length = 1953 Score = 115 bits (58), Expect = 9e-23 Identities = 94/106 (88%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||||||||| | ||||||| || ||||| | || |||||| || || |||||||||| Sbjct: 623 ccttctccgccgccttcttgggcaggagcacggagtggatgttggggaggacgccgccgt 564 Query: 251 gcgcgatggtgacgccggccagcagcctcccgagctcctggtcgtt 296 |||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 563 gcgcgatggtgacgccggccagcagcttcccgagctcctcgtcgtt 518 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 139 gccttcttgggggacttggcggccttcttgggcgacttgccctccttg 186 ||||||||||||||||||||| |||||||||| |||||| ||||||| Sbjct: 687 gccttcttgggggacttggcgcccttcttgggggacttgggctccttg 640
>gb|AY104486.1| Zea mays PCO109435 mRNA sequence Length = 992 Score = 111 bits (56), Expect = 1e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||||| ||||||||||| ||||| || |||||||| ||||||||||||| Sbjct: 466 tcttggggagcagcacagggttgatgttgggcagaaccccgccgtgtgcgatggtgacgc 407 Query: 266 cggccagcagcctcccgagctcct 289 ||||||| ||| |||||||||||| Sbjct: 406 cggccagtagcttcccgagctcct 383
>dbj|D38087.1|WHTPH2AA Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-2 Length = 717 Score = 111 bits (56), Expect = 1e-21 Identities = 98/112 (87%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||||| | ||||||||| || | ||||||||||| ||||||||||||| Sbjct: 434 tcttggggagcagcacggagttgatgttggggatgacgccgccgtgggcgatggtgacgc 375 Query: 266 cggccagcagcctcccgagctcctggtcgttcctcacggcgaggagcaggtg 317 |||| |||||||| ||||||||||||||||| | ||||| || |||||||| Sbjct: 374 cggcgagcagcctgccgagctcctggtcgttgcggacggccagcagcaggtg 323 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 cttcttgggggacttggcggc 161 ||||||||||||||||||||| Sbjct: 499 cttcttgggggacttggcggc 479
>gb|BT019315.1| Zea mays clone Contig989.F mRNA sequence Length = 699 Score = 107 bits (54), Expect = 2e-20 Identities = 93/106 (87%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||||||||| | ||||||| || ||||| | || |||||| || || ||||| |||| Sbjct: 474 ccttctccgccgccttcttgggcaggagcacggagtggatgttggggaggacgccaccgt 415 Query: 251 gcgcgatggtgacgccggccagcagcctcccgagctcctggtcgtt 296 |||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 414 gcgcgatggtgacgccggccagcagcttcccgagctcctcgtcgtt 369 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 139 gccttcttgggggacttggcggccttcttgggcgacttgccctccttg 186 ||||||||||||||||||||| |||||||||| |||||| ||||||| Sbjct: 538 gccttcttgggggacttggcgcccttcttgggggacttgggctccttg 491
>gb|AY109370.1| Zea mays CL2029_4 mRNA sequence Length = 1051 Score = 103 bits (52), Expect = 3e-19 Identities = 94/108 (87%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||||||||||| ||||||| ||||| || |||||||| || || ||||| ||||||| Sbjct: 499 ccttctccgccgtcttcttgggcagcagaacagggttgatattggggagcacaccgccgt 440 Query: 251 gcgcgatggtgacgccggccagcagcctcccgagctcctggtcgttcc 298 | |||||||| |||||| |||||||| |||| ||||||| |||||||| Sbjct: 439 gagcgatggtcacgccgcccagcagcttcccaagctcctcgtcgttcc 392 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 152 acttggcggccttcttgggcgacttgccctccttg 186 ||||||||||||||||||||||||| |||||||| Sbjct: 550 acttggcggccttcttgggcgactttgcctccttg 516
>dbj|D38090.1|WHTPH2AD Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-9 Length = 704 Score = 103 bits (52), Expect = 3e-19 Identities = 97/112 (86%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||||| | ||||||||| || | |||||| ||||| ||||||||||||| Sbjct: 411 tcttggggagcagcacggagttgatgttggggatcacgccaccgtgggcgatggtgacgc 352 Query: 266 cggccagcagcctcccgagctcctggtcgttcctcacggcgaggagcaggtg 317 | || |||||||| ||||||||||||||||| | || ||||| |||||||| Sbjct: 351 cagcgagcagcctgccgagctcctggtcgttgcggacagcgagcagcaggtg 300 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 cttcttgggcgacttgccctcctt 185 |||||||||||||||| ||||||| Sbjct: 455 cttcttgggcgacttggcctcctt 432
>dbj|D38088.1|WHTPH2AB Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-3 Length = 1153 Score = 103 bits (52), Expect = 3e-19 Identities = 97/112 (86%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||||| | ||||||||| || | ||||||||||| ||||||||||||| Sbjct: 432 tcttggggagcagcacggagttgatgttggggatgacgccgccgtgggcgatggtgacgc 373 Query: 266 cggccagcagcctcccgagctcctggtcgttcctcacggcgaggagcaggtg 317 |||| |||||||| || |||||||||||||| | ||||| || |||||||| Sbjct: 372 cggcgagcagcctgcccagctcctggtcgttgcggacggccagcagcaggtg 321
>emb|X94973.1|TAH2A274 T.aestivum histone H2A gene (clone TH274) Length = 2546 Score = 97.6 bits (49), Expect = 2e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 241 acgccgccgtgcgcgatggtgacgccggccagcagcctcccgagctcctggtcgttcctc 300 ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| | Sbjct: 2198 acgccgccgtgggcgatggtgacgccggcaagcagcctgccgagctcctggtcgttgcgg 2139 Query: 301 acggcgaggagcaggtg 317 |||||||| |||||||| Sbjct: 2138 acggcgagcagcaggtg 2122 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 cttcttgggcgacttgccctcctt 185 |||||||||||||||| ||||||| Sbjct: 2277 cttcttgggcgacttggcctcctt 2254
>gb|L75802.1|WHTHIH2A Triticum aestivum histone H2A gene, complete cds Length = 2546 Score = 97.6 bits (49), Expect = 2e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 241 acgccgccgtgcgcgatggtgacgccggccagcagcctcccgagctcctggtcgttcctc 300 ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| | Sbjct: 2198 acgccgccgtgggcgatggtgacgccggcaagcagcctgccgagctcctggtcgttgcgg 2139 Query: 301 acggcgaggagcaggtg 317 |||||||| |||||||| Sbjct: 2138 acggcgagcagcaggtg 2122 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 cttcttgggcgacttgccctcctt 185 |||||||||||||||| ||||||| Sbjct: 2277 cttcttgggcgacttggcctcctt 2254
>gb|U08225.1|ZMU08225 Zea mays W-22 histone H2A mRNA, complete cds Length = 714 Score = 95.6 bits (48), Expect = 8e-17 Identities = 93/108 (86%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||||||||||| ||||||| ||||| || |||||||| || || ||||| ||||||| Sbjct: 480 ccttctccgccgtcttcttgggcagcagaacagggttgatattggggagcacaccgccgt 421 Query: 251 gcgcgatggtgacgccggccagcagcctcccgagctcctggtcgttcc 298 | |||||||| |||||| ||| |||| |||| ||||||| |||||||| Sbjct: 420 gagcgatggtcacgccgcccaacagcttcccaagctcctcgtcgttcc 373 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 139 gccttcttgggggacttggcggccttcttgggcgacttgccctccttg 186 |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 544 gccttcttaggggacttggcggccttcttgggcgactttgcctccttg 497
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 91.7 bits (46), Expect = 1e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 211 gggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgccggcc 270 ||||||||||||||||||||||| |||||||| || || ||||||||||||||||| ||| Sbjct: 7508467 gggagcagcaccgggttgatgttcggcagcacaccaccatgcgcgatggtgacgccagcc 7508408 Query: 271 agcagc 276 |||||| Sbjct: 7508407 agcagc 7508402 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 261 gacgccggccagcagcctcccga 283 ||||||||||||||||||||||| Sbjct: 34705649 gacgccggccagcagcctcccga 34705627
>emb|AL662960.3|OSJN00162 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0021F22, complete sequence Length = 181498 Score = 91.7 bits (46), Expect = 1e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 211 gggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgccggcc 270 ||||||||||||||||||||||| |||||||| || || ||||||||||||||||| ||| Sbjct: 30940 gggagcagcaccgggttgatgttcggcagcacaccaccatgcgcgatggtgacgccagcc 30881 Query: 271 agcagc 276 |||||| Sbjct: 30880 agcagc 30875
>gb|BT017719.1| Zea mays clone EL01N0447A04.c mRNA sequence Length = 772 Score = 87.7 bits (44), Expect = 2e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||| || || ||||| ||||| |||||||| |||||||||||||||||||| | Sbjct: 447 tcttggggaggaggacggggttaatgttgggcagcacaccgccgtgcgcgatggtgaccc 388 Query: 266 cggccagcagcctcccgagctcctggtcgttcctcacggcgaggagcaggtg 317 | |||||||| | |||||||||| |||||| | | ||||||||| ||||| Sbjct: 387 cacccagcagcttgccgagctcctcgtcgttgcggatggcgaggaggaggtg 336 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 cggccttcttgggggacttgg 157 ||||||||||||||||||||| Sbjct: 507 cggccttcttgggggacttgg 487
>gb|AF493985.1| Triticum aestivum H2A-1 gene, partial sequence Length = 538 Score = 77.8 bits (39), Expect = 2e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||||| | ||||||||| || | ||| |||||||| ||||||||||||| Sbjct: 266 tcttggggagcagcacggagttgatgttggggatcacaccgccgtgggcgatggtgacgc 325 Query: 266 cggccagcagc 276 |||| |||||| Sbjct: 326 cggcgagcagc 336 Score = 48.1 bits (24), Expect = 0.018 Identities = 44/51 (86%), Gaps = 6/51 (11%) Strand = Plus / Plus Query: 141 cttcttgggggacttggcggc------cttcttgggcgacttgccctcctt 185 ||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 195 cttcttgggggacttggcggccgtcttcttcttgggcgacttggcctcctt 245
>gb|BC010336.1| Mus musculus H2A histone family, member X, mRNA (cDNA clone MGC:11561 IMAGE:3156946), complete cds Length = 1414 Score = 61.9 bits (31), Expect = 1e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 405 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 346 Query: 266 cggccagcagc 276 || |||||||| Sbjct: 345 cgcccagcagc 335
>gb|AC122428.4| Mus musculus BAC clone RP24-175C20 from chromosome 9, complete sequence Length = 185902 Score = 61.9 bits (31), Expect = 1e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 149656 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 149715 Query: 266 cggccagcagc 276 || |||||||| Sbjct: 149716 cgcccagcagc 149726
>ref|NM_010436.2| Mus musculus H2A histone family, member X (H2afx), mRNA Length = 1414 Score = 61.9 bits (31), Expect = 1e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 405 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 346 Query: 266 cggccagcagc 276 || |||||||| Sbjct: 345 cgcccagcagc 335
>emb|CR700361.2|CNS0G3CL Tetraodon nigroviridis full-length cDNA Length = 547 Score = 61.9 bits (31), Expect = 1e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||||| | |||||| |||||||||||||| || |||||||| || | Sbjct: 387 tcttgggcagcagcaccgcctggatgttgggcagcacgccgccctgggcgatggtcactc 328 Query: 266 cggccagcagc 276 || |||||||| Sbjct: 327 cgcccagcagc 317
>emb|Z35401.1|MMHISTH2A M.musculus C3H gene for histone H2A.X Length = 2166 Score = 61.9 bits (31), Expect = 1e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 984 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 925 Query: 266 cggccagcagc 276 || |||||||| Sbjct: 924 cgcccagcagc 914
>emb|X58069.1|MMH2AX Mouse mRNA for Histone H2A.X Length = 1359 Score = 61.9 bits (31), Expect = 1e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 409 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 350 Query: 266 cggccagcagc 276 || |||||||| Sbjct: 349 cgcccagcagc 339
>gb|BC005468.1| Mus musculus H2A histone family, member X, mRNA (cDNA clone MGC:6616 IMAGE:3490058), complete cds Length = 1367 Score = 61.9 bits (31), Expect = 1e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 399 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 340 Query: 266 cggccagcagc 276 || |||||||| Sbjct: 339 cgcccagcagc 329
>dbj|AK088040.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430002L09 product:H2A histone family, member X, full insert sequence Length = 1379 Score = 61.9 bits (31), Expect = 1e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 428 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 369 Query: 266 cggccagcagc 276 || |||||||| Sbjct: 368 cgcccagcagc 358
>dbj|AK008124.1| Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010005I09 product:H2A histone family, member X, full insert sequence Length = 564 Score = 61.9 bits (31), Expect = 1e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 425 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 366 Query: 266 cggccagcagc 276 || |||||||| Sbjct: 365 cgcccagcagc 355
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||| | ||| |||||| ||||||||||||||| |||||||||||| Sbjct: 20924435 tcttggggagcagcgtctggtggatgttgggcagcacgccgccggcggcgatggtgacgg 20924494 Query: 266 cggccagcagcctcccgagctcctggtcgtt 296 || | |||||||| | ||||||| |||||| Sbjct: 20924495 cgccgagcagcctgctcagctcctcgtcgtt 20924525
>dbj|AK121752.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087P07, full insert sequence Length = 747 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||| | ||| |||||| ||||||||||||||| |||||||||||| Sbjct: 477 tcttggggagcagcgtctggtggatgttgggcagcacgccgccggcggcgatggtgacgg 418 Query: 266 cggccagcagcctcccgagctcctggtcgtt 296 || | |||||||| | ||||||| |||||| Sbjct: 417 cgccgagcagcctgctcagctcctcgtcgtt 387
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||| | ||| |||||| ||||||||||||||| |||||||||||| Sbjct: 20850649 tcttggggagcagcgtctggtggatgttgggcagcacgccgccggcggcgatggtgacgg 20850708 Query: 266 cggccagcagcctcccgagctcctggtcgtt 296 || | |||||||| | ||||||| |||||| Sbjct: 20850709 cgccgagcagcctgctcagctcctcgtcgtt 20850739
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 182172 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||| | ||| |||||| ||||||||||||||| |||||||||||| Sbjct: 9925 tcttggggagcagcgtctggtggatgttgggcagcacgccgccggcggcgatggtgacgg 9984 Query: 266 cggccagcagcctcccgagctcctggtcgtt 296 || | |||||||| | ||||||| |||||| Sbjct: 9985 cgccgagcagcctgctcagctcctcgtcgtt 10015
>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107819 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||| | ||| |||||| ||||||||||||||| |||||||||||| Sbjct: 34560 tcttggggagcagcgtctggtggatgttgggcagcacgccgccggcggcgatggtgacgg 34501 Query: 266 cggccagcagcctcccgagctcctggtcgtt 296 || | |||||||| | ||||||| |||||| Sbjct: 34500 cgccgagcagcctgctcagctcctcgtcgtt 34470
>emb|BX063165.1|CNS09KWH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC44DD07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 902 Score = 60.0 bits (30), Expect = 5e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||| | ||||| ||||||| |||||||| | | |||||| |||||||||||||| | Sbjct: 511 ccttcttctccgtcttcttgggcagcagcacggcctggatgttgggcagcacgccgccct 570 Query: 251 gcgcgatggtgacgccggccagcagc 276 | |||||||| || |||| ||||||| Sbjct: 571 gggcgatggtcaccccggacagcagc 596
>emb|BX063164.1|CNS09KWG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC44DD07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 924 Score = 60.0 bits (30), Expect = 5e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||| | ||||| ||||||| |||||||| | | |||||| |||||||||||||| | Sbjct: 490 ccttcttctccgtcttcttgggcagcagcacggcctggatgttgggcagcacgccgccct 431 Query: 251 gcgcgatggtgacgccggccagcagc 276 | |||||||| || |||| ||||||| Sbjct: 430 gggcgatggtcaccccggacagcagc 405
>emb|BX040864.1|CNS093P0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC11DG02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 972 Score = 60.0 bits (30), Expect = 5e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||| | ||||| ||||||| |||||||| | | |||||| |||||||||||||| | Sbjct: 483 ccttcttctccgtcttcttgggcagcagcacggcctggatgttgggcagcacgccgccct 424 Query: 251 gcgcgatggtgacgccggccagcagc 276 | |||||||| || |||| ||||||| Sbjct: 423 gggcgatggtcaccccggacagcagc 398
>emb|BX019683.1|CNS08NCN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA3AB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 651 Score = 60.0 bits (30), Expect = 5e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||| | ||||| ||||||| |||||||| | | |||||| |||||||||||||| | Sbjct: 494 ccttcttctccgtcttcttgggcagcagcacggcctggatgttgggcagcacgccgccct 435 Query: 251 gcgcgatggtgacgccggccagcagc 276 | |||||||| || |||| ||||||| Sbjct: 434 gggcgatggtcaccccggacagcagc 409
>emb|BX016452.1|CNS08KUW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA24CG10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 594 Score = 60.0 bits (30), Expect = 5e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||| | ||||| ||||||| |||||||| | | |||||| |||||||||||||| | Sbjct: 61 ccttcttctccgtcttcttgggcagcagcacggcctggatgttgggcagcacgccgccct 120 Query: 251 gcgcgatggtgacgccggccagcagc 276 | |||||||| || |||| ||||||| Sbjct: 121 gggcgatggtcaccccggacagcagc 146
>emb|BX016451.1|CNS08KUV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA24CG10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 556 Score = 60.0 bits (30), Expect = 5e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||| | ||||| ||||||| |||||||| | | |||||| |||||||||||||| | Sbjct: 417 ccttcttctccgtcttcttgggcagcagcacggcctggatgttgggcagcacgccgccct 358 Query: 251 gcgcgatggtgacgccggccagcagc 276 | |||||||| || |||| ||||||| Sbjct: 357 gggcgatggtcaccccggacagcagc 332
>emb|BX009846.1|CNS08FRE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA15DF01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 357 Score = 60.0 bits (30), Expect = 5e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||| | ||||| ||||||| |||||||| | | |||||| |||||||||||||| | Sbjct: 104 ccttcttctccgtcttcttgggcagcagcacggcctggatgttgggcagcacgccgccct 163 Query: 251 gcgcgatggtgacgccggccagcagc 276 | |||||||| || |||| ||||||| Sbjct: 164 gggcgatggtcaccccggacagcagc 189
>ref|XM_551996.1| Anopheles gambiae str. PEST ENSANGP00000029020 (ENSANGG00000023190), partial mRNA Length = 297 Score = 60.0 bits (30), Expect = 5e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||| | ||||| ||||||| |||||||| | | |||||| |||||||||||||| | Sbjct: 292 ccttcttctccgtcttcttgggcagcagcacggcctggatgttgggcagcacgccgccct 233 Query: 251 gcgcgatggtgacgccggccagcagc 276 | |||||||| || |||| ||||||| Sbjct: 232 gggcgatggtcaccccggacagcagc 207
>ref|XM_314447.2| Anopheles gambiae str. PEST ENSANGP00000016040 (ENSANGG00000013551), partial mRNA Length = 375 Score = 60.0 bits (30), Expect = 5e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||| | ||||| ||||||| |||||||| | | |||||| |||||||||||||| | Sbjct: 370 ccttcttctccgtcttcttgggcagcagcacggcctggatgttgggcagcacgccgccct 311 Query: 251 gcgcgatggtgacgccggccagcagc 276 | |||||||| || |||| ||||||| Sbjct: 310 gggcgatggtcaccccggacagcagc 285
>ref|XM_306256.1| Anopheles gambiae str. PEST ENSANGP00000000004 (ENSANGG00000000004), mRNA Length = 630 Score = 60.0 bits (30), Expect = 5e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||| | ||||| ||||||| |||||||| | | |||||| |||||||||||||| | Sbjct: 484 ccttcttctccgtcttcttgggcagcagcacggcctggatgttgggcagcacgccgccct 425 Query: 251 gcgcgatggtgacgccggccagcagc 276 | |||||||| || |||| ||||||| Sbjct: 424 gggcgatggtcaccccggacagcagc 399
>ref|NM_021840.2| Rattus norvegicus histone 2a (H2a), mRNA Length = 1579 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 200 ccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatgg 259 ||||| ||||||| |||| ||||| | |||||| ||||| |||||||| |||||||||| Sbjct: 369 ccgtcttcttgggcagcaacaccgcctggatgttgggcaggacgccgccctgcgcgatgg 310 Query: 260 tgacgccggccagcagc 276 | |||| | |||||||| Sbjct: 309 tcacgcggcccagcagc 293
>gb|BC099140.1| Rattus norvegicus histone 2a, mRNA (cDNA clone MGC:116285 IMAGE:7457173), complete cds Length = 1579 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 200 ccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatgg 259 ||||| ||||||| |||| ||||| | |||||| ||||| |||||||| |||||||||| Sbjct: 369 ccgtcttcttgggcagcaacaccgcctggatgttgggcaggacgccgccctgcgcgatgg 310 Query: 260 tgacgccggccagcagc 276 | |||| | |||||||| Sbjct: 309 tcacgcggcccagcagc 293
>gb|AY389588.1| Hyacinthus orientalis histone H2A mRNA, complete cds Length = 643 Score = 58.0 bits (29), Expect = 2e-05 Identities = 101/125 (80%) Strand = Plus / Minus Query: 199 gccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatg 258 |||||| |||| || |||| ||||||||||||||| ||||| || || ||||| ||||| Sbjct: 419 gccgtcttcttcggcagcaacaccgggttgatgttcggcaggactccaccgtgagcgatc 360 Query: 259 gtgacgccggccagcagcctcccgagctcctggtcgttcctcacggcgaggagcaggtgc 318 |||||||| || || ||| | || | |||| ||||||||||| || || |||| |||| Sbjct: 359 gtgacgcctgcaagtagcttgcccaattcctcatcgttcctcactgccagcagcacgtgc 300 Query: 319 ctggg 323 ||||| Sbjct: 299 ctggg 295
>dbj|AB168678.1| Macaca fascicularis testis cDNA clone: QtsA-14092, similar to human histone 2, H2aa (HIST2H2AA), mRNA, RefSeq: NM_003516.2 Length = 778 Score = 56.0 bits (28), Expect = 7e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 200 ccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatgg 259 ||||| |||| ||||||||||| | | |||||||||||| |||||||| || ||||||| Sbjct: 563 ccgtcttcttagggagcagcacggcctggatgttaggcaggacgccgccctgggcgatgg 504 Query: 260 tgac 263 |||| Sbjct: 503 tgac 500
>gb|AF255740.1|AF255740 Bufo bufo gagarizans histone H1 (H1) and histone H2A variant (H2AInr) genes, complete cds Length = 2396 Score = 56.0 bits (28), Expect = 7e-05 Identities = 82/100 (82%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| || ||||||||||| | Sbjct: 1582 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgggcgatggtgactc 1523 Query: 266 cggccagcagcctcccgagctcctggtcgttcctcacggc 305 || |||||||| | |||||||| |||||| | |||||| Sbjct: 1522 cgcccagcagcttgttgagctcctcgtcgttgcgcacggc 1483
>gb|AF255739.1|AF255739 Bufo bufo gagarizans replication-dependent histone H2A gene, complete cds Length = 2120 Score = 56.0 bits (28), Expect = 7e-05 Identities = 82/100 (82%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| ||||| || || ||||||||||||| Sbjct: 1163 tcttgggcagcagcacggcctggatgttgggcaggacgcctccctgggcgatggtgacgc 1104 Query: 266 cggccagcagcctcccgagctcctggtcgttcctcacggc 305 || |||||||| | |||||||| |||||| | |||||| Sbjct: 1103 cgcccagcagcttgttgagctcctcgtcgttgcgcacggc 1064
>ref|NM_178185.1| Mus musculus histone 1, H2ao (Hist1h2ao), mRNA Length = 393 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 299 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 298 ggcccagcagc 288
>gb|AC034285.6| Mus musculus chromosome 13, clone RP23-220G21, complete sequence Length = 209720 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 64627 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 64568 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 64567 ggcccagcagc 64557 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 60550 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 60609 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 60610 ggcccagcagc 60620 Score = 48.1 bits (24), Expect = 0.018 Identities = 51/60 (85%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 101110 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 101169
>ref|NG_002734.1| Mus musculus histone 1, H2aj (Hist1h2aj) pseudogene on chromosome 13 Length = 1357 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 840 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 781 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 780 ggcccagcagc 770
>ref|XM_545430.1| PREDICTED: Canis familiaris similar to Histone H2A.l (H2A/l) (LOC488308), mRNA Length = 456 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 421 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 362 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 361 ggcccagcagc 351
>ref|XM_849168.1| PREDICTED: Canis familiaris similar to Histone H2A.l (H2A/l) (LOC611496), mRNA Length = 393 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 299 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 298 ggcccagcagc 288
>ref|XM_545413.1| PREDICTED: Canis familiaris similar to Histone H2A.l (H2A/l) (LOC488291), mRNA Length = 387 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 299 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 298 ggcccagcagc 288
>ref|XM_545411.1| PREDICTED: Canis familiaris similar to Histone H2A.1 (LOC488289), mRNA Length = 393 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 299 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 298 ggcccagcagc 288
>ref|XM_545400.2| PREDICTED: Canis familiaris similar to Histone H2A.l (H2A/l) (LOC488278), mRNA Length = 576 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 299 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 298 ggcccagcagc 288
>ref|XM_545394.2| PREDICTED: Canis familiaris similar to Histone H2A.l (H2A/l) (LOC488272), mRNA Length = 393 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 299 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 298 ggcccagcagc 288
>ref|XM_848774.1| PREDICTED: Canis familiaris similar to Histone H2A.1 (LOC611132), mRNA Length = 393 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 299 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 298 ggcccagcagc 288
>ref|XM_848759.1| PREDICTED: Canis familiaris similar to Histone H2A.l (H2A/l) (LOC488270), mRNA Length = 462 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 427 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 368 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 367 ggcccagcagc 357
>ref|XM_545384.2| PREDICTED: Canis familiaris similar to Histone H2A.l (H2A/l) (LOC488262), mRNA Length = 393 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 299 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 298 ggcccagcagc 288
>ref|XM_848716.1| PREDICTED: Canis familiaris similar to Histone H2A.1 (LOC611082), mRNA Length = 393 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 299 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 298 ggcccagcagc 288
>ref|XM_545376.2| PREDICTED: Canis familiaris similar to Histone H2A.l (H2A/l) (LOC488254), mRNA Length = 417 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 382 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 323 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 322 ggcccagcagc 312
>ref|XM_545373.1| PREDICTED: Canis familiaris similar to histone H2A (LOC488251), mRNA Length = 396 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 299 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 298 ggcccagcagc 288
>ref|XM_854341.1| PREDICTED: Canis familiaris similar to Histone H2A.l (H2A/l), transcript variant 2 (LOC488268), mRNA Length = 402 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 299 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 298 ggcccagcagc 288
>ref|XM_545390.1| PREDICTED: Canis familiaris similar to Histone H2A.l (H2A/l), transcript variant 1 (LOC488268), mRNA Length = 393 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 299 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 298 ggcccagcagc 288
>ref|XM_978341.1| PREDICTED: Mus musculus similar to histone 2a, transcript variant 2 (LOC665433), mRNA Length = 465 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 390 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 331 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 330 ggcccagcagc 320
>ref|XM_978296.1| PREDICTED: Mus musculus similar to histone 2a, transcript variant 1 (LOC665433), mRNA Length = 467 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 392 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 333 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 332 ggcccagcagc 322
>ref|XM_539322.1| PREDICTED: Canis familiaris similar to Histone H2A.1 (LOC482203), mRNA Length = 393 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 299 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 298 ggcccagcagc 288
>gb|BC058544.1| Mus musculus cDNA clone IMAGE:5711765, with apparent retained intron Length = 497 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 389 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 330 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 329 ggcccagcagc 319
>emb|CR673199.2|CNS0FIET Tetraodon nigroviridis full-length cDNA Length = 775 Score = 54.0 bits (27), Expect = 3e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggt 260 ||||||| |||||||||| | |||||| |||||||||||||| || |||||||| Sbjct: 396 tcttgggcagcagcaccgcctggatgttgggcagcacgccgccctgagcgatggt 342
>emb|X80328.1|MMH2B143 M.musculus genes H2b-143, H3-143 Length = 3210 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 1931 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 1872 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 1871 ggcccagcagc 1861
>emb|X59962.1|RNTH2AB R.norvegicus genes for TH2A and TH2B histones Length = 1653 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 1494 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 1435 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 1434 ggcccagcagc 1424
>emb|X59961.1|RNH2AB R.norvegicus genes for H2A and H2B histones Length = 1635 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 1240 tcttgggcagcagcacagcctggatgttgggcagaacgccgccctgcgcgatggtcacgc 1181 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 1180 ggcccagcagc 1170
>emb|X05863.1|MMHIS2BB Mouse H2B and H2A-pseudo histone genes (291B) Length = 1826 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 1306 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 1247 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 1246 ggcccagcagc 1236
>emb|X05862.1|MMHIS2BA Mouse H2B and H2A histone genes (291A) Length = 1797 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 1307 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 1248 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 1247 ggcccagcagc 1237
>gb|BC099406.1| Mus musculus histone 1, H2ac, mRNA (cDNA clone MGC:117571 IMAGE:30789778), complete cds Length = 1075 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 368 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 309 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 308 ggcccagcagc 298
>emb|AL592149.8| Mouse DNA sequence from clone RP23-283N14 on chromosome 13 Contains a novel gene, the genes for three H1, four H2a, five H2b, four H3 and four H4 histone family members, the 3' end of a variant of the Hfe gene for hemochromatosis protein (Mr2) and ten CpG islands, complete sequence Length = 184730 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 163975 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 164034 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 164035 ggcccagcagc 164045 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 55434 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 55375 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 55374 ggcccagcagc 55364 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 51357 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 51416 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 51417 ggcccagcagc 51427 Score = 48.1 bits (24), Expect = 0.018 Identities = 51/60 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 14870 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 14811
>ref|NM_178189.2| Mus musculus histone 1, H2ac (Hist1h2ac), mRNA Length = 2493 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 402 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 343 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 342 ggcccagcagc 332
>emb|AL589879.21| Mouse DNA sequence from clone RP23-38E20 on chromosome 13 Contains the genes for H2b histone family member A, two H2a, two H4 and an H2b histone family member, a serine/threonine protein kinase pseudogene, a novel pseudogene, a novel gene (4930500C15Rik), the gene for a novel KRAB box and C2H2 Zinc Finger containing protein, a ribosomal protein L21 (RPL21) pseudogene, a TU mitochondrial translation elongation factor (tufa) pseudogene, the 5' end of the gene for a novel protein similar to nuclear envelope pore membrane protein POM121 and four CpG islands, complete sequence Length = 182817 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 33285 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 33344 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 33345 ggcccagcagc 33355 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 10991 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 10932 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 10931 ggcccagcagc 10921
>emb|AL590614.8| Mouse DNA sequence from clone RP23-9O16 on chromosome 13 Contains the 3' end of the gene for a novel protein similar to nuclear envelope pore membrane protein POM121, the Prss16 gene for thymus serine protease16, three novel genes, the genes for two H2a, two H2b and one H4 histone family members, a ribosomal protein L37A (Rpl37a) pseudogene, a novel pseudogene, three genes for novel vomeronasal 1 receptor H (V1rh) family members, the gene for a novel vomeronasal 1 receptor I (V1ri) family member, six V1ri pseudogenes, a V1rh pseudogene and six CpG islands, complete sequence Length = 210845 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 59926 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 59985 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 59986 ggcccagcagc 59996 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 52551 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 52610 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 52611 ggcccagcagc 52621
>emb|AL589651.8| Mouse DNA sequence from clone RP23-138F20 on chromosome 13 Contains five genes for olfactory receptors, a novel gene, the H1f5 gene for H1 histone family member 5, three genes and one pseudogene for H2a histone family members, four genes for H2b, two genes for H4, and two genes for H3 histone family members and seven CpG islands, complete sequence Length = 222823 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 174460 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 174519 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 174520 ggcccagcagc 174530 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 142452 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 142511 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 142512 ggcccagcagc 142522 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 137769 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 137710 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 137709 ggcccagcagc 137699 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| |||||||| ||||||||||| |||| | |||||||| Sbjct: 207873 gatgttgggcaggacgccgccctgcgcgatggtcacgcggcccagcagc 207921
>emb|AL590388.4| Mouse DNA sequence from clone RP23-480B19 on chromosome 13 Contains the Slc17a1 gene for solute carrier family 17 (vesicular glutamate transporter) member 1, two genes for novel solute carrier family 17 (Slc17) members, two novel genes, the gene for a novel C3HC4 type zinc finger (ring finger) protein, the gene for an H2a, an H2b, two genes for H3 and two genes for H4 histone family members, a H2a histone family pseudogene, the H1f1 and H1f2 genes for H1 histone family members 1 and 2, the H3f2 gene for H3 histone family, member 2 (H3.2), a novel pseudogene, the Hfe gene for hemochromatosis protein (Mr2) and two CpG islands, complete sequence Length = 186062 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 142178 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 142119 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 142118 ggcccagcagc 142108 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 136888 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 136947 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 136948 ggcccagcagc 136958
>gb|BC065803.1| Mus musculus histone 1, H2ag, mRNA (cDNA clone MGC:73771 IMAGE:1263745), complete cds Length = 527 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 380 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 321 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 320 ggcccagcagc 310
>gb|BC076498.1| Mus musculus histone 1, H2ae, mRNA (cDNA clone MGC:90847 IMAGE:5713252), complete cds Length = 492 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 388 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 329 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 328 ggcccagcagc 318
>dbj|AK145443.1| Mus musculus 5 days embryo whole body cDNA, RIKEN full-length enriched library, clone:I0C0045N09 product:histone 1, H2ad, full insert sequence Length = 446 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 391 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 332 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 331 ggcccagcagc 321
>dbj|AK146117.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730004H15 product:histone 1, H2ai, full insert sequence Length = 1396 Score = 54.0 bits (27), Expect = 3e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| ||| Sbjct: 369 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacg- 311 Query: 266 cggccagcagc 276 ||||||||||| Sbjct: 310 cggccagcagc 300
>dbj|AK146846.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920064A15 product:histone 1, H2ad, full insert sequence Length = 445 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 389 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 330 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 329 ggcccagcagc 319
>ref|NM_175660.2| Mus musculus histone 1, H2ab (Hist1h2ab), mRNA Length = 506 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 403 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 344 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 343 ggcccagcagc 333
>gb|BC090402.1| Mus musculus cDNA clone MGC:103288 IMAGE:5150365, complete cds Length = 447 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 370 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 311 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 310 ggcccagcagc 300
>gb|BC062251.1| Mus musculus cDNA clone MGC:73635 IMAGE:1224905, complete cds Length = 444 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 370 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 311 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 310 ggcccagcagc 300
>gb|BC069947.1| Mus musculus cDNA clone IMAGE:6494016 Length = 2110 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 628 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 569 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 568 ggcccagcagc 558
>gb|BC055904.1| Mus musculus cDNA clone IMAGE:4913108 Length = 2221 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 626 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 567 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 566 ggcccagcagc 556
>ref|NM_178186.2| Mus musculus histone 1, H2ag (Hist1h2ag), mRNA Length = 527 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 380 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 321 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 320 ggcccagcagc 310
>ref|NM_178187.2| Mus musculus histone 1, H2ae (Hist1h2ae), mRNA Length = 705 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 471 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 412 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 411 ggcccagcagc 401
>ref|NM_178188.3| Mus musculus histone 1, H2ad (Hist1h2ad), mRNA Length = 393 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 299 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 298 ggcccagcagc 288
>gb|U62669.1|MMU62669 Mus musculus histone H3.2-F (H3-F), histone H2a.1-F (H2a-F), histone H2b-F (H2b-F) genes, complete cds Length = 2822 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 1471 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 1530 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 1531 ggcccagcagc 1541
>dbj|AK028026.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1190022L06 product:HISTONE H2A homolog [Homo sapiens], full insert sequence Length = 705 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 471 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 412 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 411 ggcccagcagc 401
>dbj|AK033518.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030420B16 product:histone 1, H2ac, full insert sequence Length = 2493 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 402 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 343 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 342 ggcccagcagc 332
>ref|NM_021839.1| Rattus norvegicus testis-specific histone 2a (Hist1h2aa), mRNA Length = 393 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 299 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 298 ggcccagcagc 288
>ref|NM_178183.1| Mus musculus histone 1, H2ak (Hist1h2ak), mRNA Length = 393 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 299 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 298 ggcccagcagc 288
>ref|NM_178182.1| Mus musculus histone 1, H2ai (Hist1h2ai), mRNA Length = 393 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 299 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 298 ggcccagcagc 288
>ref|XM_225372.2| PREDICTED: Rattus norvegicus similar to Histone H2A.1 (LOC306962), mRNA Length = 437 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||||| | ||| |||||||| || ||||| ||||||||||| |||| Sbjct: 372 tcttgggcagcagcaccgcctggatattaggcaggacaccgccctgcgcgatggtcacgc 313 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 312 ggcccagcagc 302
>gb|AY158920.1| Mus musculus histone protein Hist1h2ab gene, complete cds Length = 1390 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 858 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 799 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 798 ggcccagcagc 788
>gb|AY158919.1| Mus musculus histone protein Hist1h2ac gene, complete cds Length = 1390 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 858 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 799 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 798 ggcccagcagc 788
>gb|AY158918.1| Mus musculus histone protein Hist1h2ad gene, complete cds Length = 1390 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 858 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 799 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 798 ggcccagcagc 788
>gb|AY158917.1| Mus musculus histone protein Hist1h2ae gene, complete cds Length = 1390 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 858 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 799 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 798 ggcccagcagc 788
>gb|AY158915.1| Mus musculus histone protein Hist1h2ag gene, complete cds Length = 1392 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 857 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 798 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 797 ggcccagcagc 787
>gb|AY158914.1| Mus musculus histone protein Hist1h2ah gene, complete cds Length = 1381 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 855 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 796 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 795 ggcccagcagc 785
>gb|AY158913.1| Mus musculus histone protein Hist1h2ao gene, complete cds Length = 1390 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 858 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 799 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 798 ggcccagcagc 788
>gb|AY158911.1| Mus musculus histone protein Hist1h2ak gene, complete cds Length = 1201 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 892 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 833 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 832 ggcccagcagc 822
>gb|AY158910.1| Mus musculus histone protein Hist1h2aj pseudogene, partial sequence Length = 1357 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 840 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 781 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 780 ggcccagcagc 770
>gb|AY158909.1| Mus musculus histone protein Hist1h2ai gene, complete cds Length = 1387 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 855 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 796 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 795 ggcccagcagc 785
>ref|NM_175659.1| Mus musculus histone 1, H2ah (Hist1h2ah), mRNA Length = 387 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 299 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 298 ggcccagcagc 288
>gb|U95111.1|MSU95111 Mus spretus histone H2a pseudogene, complete sequence Length = 567 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 421 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 362 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 361 ggcccagcagc 351
>gb|M33988.1|MUSH2AX1 Mouse histone H2A.1 gene, complete cds Length = 929 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 521 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 462 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 461 ggcccagcagc 451
>gb|M37736.1|MUSHIS2AR Mouse replication-dependent histone H2A.1 gene Length = 668 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 481 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 422 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 421 ggcccagcagc 411
>gb|BC106331.1| Xenopus laevis cDNA clone MGC:130860 IMAGE:7205580, complete cds Length = 799 Score = 52.0 bits (26), Expect = 0.001 Identities = 95/118 (80%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||||| | | |||||| ||||| || ||||| || ||||||||||| | Sbjct: 370 tcttggggagcagcacagactggatgttgggcaggacaccgccctgggcgatggtgaccc 311 Query: 266 cggccagcagcctcccgagctcctggtcgttcctcacggcgaggagcaggtgcctggg 323 | | ||||| | |||||||| |||||| | ||||||||| ||||||||||||| Sbjct: 310 ctccgagcagtttgttgagctcctcgtcgttgcgcacggcgagctgcaggtgcctggg 253
>ref|XM_868674.1| PREDICTED: Bos taurus similar to Histone H2A.1 (LOC616611), mRNA Length = 393 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgac 263 ||||||| |||||||||| | |||||| ||||| |||||||| || ||||||||||| Sbjct: 358 tcttgggcagcagcaccgcctggatgttgggcaggacgccgccctgagcgatggtgac 301
>gb|BC068823.1| Xenopus laevis cDNA clone IMAGE:6635737, partial cds Length = 763 Score = 52.0 bits (26), Expect = 0.001 Identities = 95/118 (80%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||||| | | |||||| ||||| || ||||| || ||||||||||| | Sbjct: 291 tcttggggagcagcacagactggatgttgggcagaaccccgccctgggcgatggtgaccc 350 Query: 266 cggccagcagcctcccgagctcctggtcgttcctcacggcgaggagcaggtgcctggg 323 | | ||||| | |||||||| |||||| | ||||||||| ||||||||||||| Sbjct: 351 ctccgagcagtttgttgagctcctcgtcgttgcgcacggcgagctgcaggtgcctggg 408
>ref|XM_543796.2| PREDICTED: Canis familiaris similar to H2A histone family, member J isoform 2 (LOC486669), mRNA Length = 598 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgac 263 ||||||| |||||||| | | |||||| ||||| |||||||| |||||||||||||| Sbjct: 436 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtgac 379
>emb|BX008487.1|CNS08EPN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA13DG08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 408 Score = 52.0 bits (26), Expect = 0.001 Identities = 59/70 (84%) Strand = Plus / Minus Query: 191 ccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgt 250 |||||| | ||||| ||||||| |||||||| | | |||||| |||||||||||||| | Sbjct: 244 ccttcttctccgtcttcttgggcagcagcacggcctggatgttgggcagcacgccgccct 185 Query: 251 gcgcgatggt 260 | |||||||| Sbjct: 184 gggcgatggt 175
>emb|X14730.1|CMHIST2A Duck H2A histone gene Length = 845 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgac 263 ||||||| |||||||| | | |||||| |||||||| ||||| |||||||||||||| Sbjct: 508 tcttgggcagcagcacggcctggatgttgggcagcaccccgccctgcgcgatggtgac 451
>emb|X03018.1|XLHISH3A Xenopus laevis histone gene cluster XlH3-A with genes H1A, H2B, H3 and H4 Length = 8592 Score = 52.0 bits (26), Expect = 0.001 Identities = 95/118 (80%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||||| | | |||||| ||||| || ||||| || ||||||||||| | Sbjct: 4729 tcttggggagcagcacagactggatgttgggcaggacaccgccctgggcgatggtgaccc 4670 Query: 266 cggccagcagcctcccgagctcctggtcgttcctcacggcgaggagcaggtgcctggg 323 | | ||||| | |||||||| |||||| | ||||||||| ||||||||||||| Sbjct: 4669 ctccgagcagtttgttgagctcctcgtcgttgcgcacggcgagctgcaggtgcctggg 4612
>gb|M21287.1|XELHX1H3 X.laevis histone H1B, H2A, H2B, and H4 genes, complete cds, and histone H3 gene, 3' end, gene cluster X1h3 Length = 8608 Score = 52.0 bits (26), Expect = 0.001 Identities = 95/118 (80%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||||| | | |||||| ||||| || ||||| || ||||||||||| | Sbjct: 4746 tcttggggagcagcacagactggatgttgggcaggacaccgccctgggcgatggtgaccc 4687 Query: 266 cggccagcagcctcccgagctcctggtcgttcctcacggcgaggagcaggtgcctggg 323 | | ||||| | |||||||| |||||| | ||||||||| ||||||||||||| Sbjct: 4686 ctccgagcagtttgttgagctcctcgtcgttgcgcacggcgagctgcaggtgcctggg 4629
>ref|NM_178218.2| Mus musculus histone 3, H2a (Hist3h2a), mRNA Length = 1991 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| |||||||| ||||||||||| |||| | |||||||| Sbjct: 390 gatgttgggcaggacgccgccctgcgcgatggtcacgcggcccagcagc 342
>gb|BC063781.1| Mus musculus histone 3, H2a, mRNA (cDNA clone MGC:70265 IMAGE:6493838), complete cds Length = 1607 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| |||||||| ||||||||||| |||| | |||||||| Sbjct: 356 gatgttgggcaggacgccgccctgcgcgatggtcacgcggcccagcagc 308
>gb|BC058119.1| Mus musculus histone 3, H2a, mRNA (cDNA clone IMAGE:6819179), with apparent retained intron Length = 1490 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| |||||||| ||||||||||| |||| | |||||||| Sbjct: 362 gatgttgggcaggacgccgccctgcgcgatggtcacgcggcccagcagc 314
>emb|BX007458.1|CNS08DX2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA12BG11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 349 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| |||||||||||||| || |||||||| || |||| ||||||| Sbjct: 141 gatgttgggcagcacgccgccctgggcgatggtcaccccggacagcagc 93
>dbj|AK077568.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730450G06 product:H2A HISTONE FAMILY, MEMBER L homolog [Homo sapiens], full insert sequence Length = 924 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| |||||||| ||||||||||| |||| | |||||||| Sbjct: 390 gatgttgggcaggacgccgccctgcgcgatggtcacgcggcccagcagc 342
>dbj|AK051448.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130049H21 product:H2A HISTONE FAMILY, MEMBER L homolog [Homo sapiens], full insert sequence Length = 1991 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| |||||||| ||||||||||| |||| | |||||||| Sbjct: 390 gatgttgggcaggacgccgccctgcgcgatggtcacgcggcccagcagc 342
>dbj|AK087537.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130315C04 product:H2A HISTONE FAMILY, MEMBER L homolog [Homo sapiens], full insert sequence Length = 1500 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| |||||||| ||||||||||| |||| | |||||||| Sbjct: 391 gatgttgggcaggacgccgccctgcgcgatggtcacgcggcccagcagc 343
>dbj|AK015962.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930534G10 product:unclassifiable, full insert sequence Length = 767 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| |||||||| ||||||||||| |||| | |||||||| Sbjct: 217 gatgttgggcaggacgccgccctgcgcgatggtcacgcggcccagcagc 265
>dbj|AK083155.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630019H19 product:H2A HISTONE FAMILY, MEMBER L homolog [Homo sapiens]; RING finger protein TERF, full insert sequence Length = 3665 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| |||||||| ||||||||||| |||| | |||||||| Sbjct: 390 gatgttgggcaggacgccgccctgcgcgatggtcacgcggcccagcagc 342
>dbj|AK082083.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230003M12 product:H2A HISTONE FAMILY, MEMBER L homolog [Homo sapiens], full insert sequence Length = 2150 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| |||||||| ||||||||||| |||| | |||||||| Sbjct: 393 gatgttgggcaggacgccgccctgcgcgatggtcacgcggcccagcagc 345
>ref|NM_178184.1| Mus musculus histone 1, H2an (Hist1h2an), mRNA Length = 393 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| |||||||| ||||||||||| |||| | |||||||| Sbjct: 336 gatgttgggcaggacgccgccctgcgcgatggtcacgcggcccagcagc 288
>gb|AY158926.1| Mus musculus histone protein Hist3h2a gene, complete cds Length = 1201 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| |||||||| ||||||||||| |||| | |||||||| Sbjct: 870 gatgttgggcaggacgccgccctgcgcgatggtcacgcggcccagcagc 822
>gb|AY158912.1| Mus musculus histone protein Hist1h2an gene, complete cds Length = 1390 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| |||||||| ||||||||||| |||| | |||||||| Sbjct: 836 gatgttgggcaggacgccgccctgcgcgatggtcacgcggcccagcagc 788
>emb|AL662809.14| Mouse DNA sequence from clone RP23-441I8 on chromosome 11, complete sequence Length = 103129 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| |||||||| ||||||||||| |||| | |||||||| Sbjct: 39545 gatgttgggcaggacgccgccctgcgcgatggtcacgcggcccagcagc 39497
>gb|U95110.1|MMU95110 Mus macedonicus histone H2a pseudogene, complete sequence Length = 571 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| |||||||| ||||||||||| |||| | |||||||| Sbjct: 403 gatgttgggcaggacgccgccctgcgcgatggtcacgcggcccagcagc 355
>gb|DQ214188.1| Taeniopygia guttata clone 0058P0024E05 histone 1 H2ai-like mRNA, complete sequence Length = 786 Score = 48.1 bits (24), Expect = 0.018 Identities = 45/52 (86%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgat 257 ||||||| |||||||| | | |||||| |||||||||||||| |||||||| Sbjct: 441 tcttgggcagcagcacggcctggatgttgggcagcacgccgccctgcgcgat 390
>gb|DQ214187.1| Taeniopygia guttata clone 0058P0044E04 histone 1 H2ai-like mRNA, complete sequence Length = 786 Score = 48.1 bits (24), Expect = 0.018 Identities = 45/52 (86%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgat 257 ||||||| |||||||| | | |||||| |||||||||||||| |||||||| Sbjct: 441 tcttgggcagcagcacggcctggatgttgggcagcacgccgccctgcgcgat 390
>gb|AY389592.1| Hyacinthus orientalis histone H2A mRNA, complete cds Length = 635 Score = 48.1 bits (24), Expect = 0.018 Identities = 72/88 (81%) Strand = Plus / Minus Query: 189 ctccttctccgccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgcc 248 ||||||| |||| || |||| || |||| ||||||||||||||| ||||| || || || Sbjct: 414 ctccttcgacgccatcttcttcggcagcaacaccgggttgatgttcggcaggactccacc 355 Query: 249 gtgcgcgatggtgacgccggccagcagc 276 ||| ||||| || ||||| || |||||| Sbjct: 354 gtgagcgatcgtcacgcctgcaagcagc 327
>emb|X02622.1|MMHISHSA Mouse gene fragment for histone H2a Length = 204 Score = 48.1 bits (24), Expect = 0.018 Identities = 51/60 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 79 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 20
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 137 cggccttcttgggggacttggcgg 160 |||||||||||||||||||||||| Sbjct: 60496 cggccttcttgggggacttggcgg 60473
>emb|BX933556.1| Gallus gallus finished cDNA, clone ChEST42h4 Length = 895 Score = 48.1 bits (24), Expect = 0.018 Identities = 42/48 (87%) Strand = Plus / Plus Query: 229 atgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 ||||| ||||| || ||||| |||||||||||||| ||| |||||||| Sbjct: 60 atgttgggcagtaccccgccctgcgcgatggtgacaccgcccagcagc 107
>gb|AY158916.1| Mus musculus histone protein Hist1h2af gene, complete cds Length = 1390 Score = 48.1 bits (24), Expect = 0.018 Identities = 51/60 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 882 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 823
>ref|NM_175661.1| Mus musculus histone 1, H2af (Hist1h2af), mRNA Length = 393 Score = 48.1 bits (24), Expect = 0.018 Identities = 51/60 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 299
>gb|U95112.1|MCU95112 Mus caroli histone H2a pseudogene, complete sequence Length = 468 Score = 48.1 bits (24), Expect = 0.018 Identities = 51/60 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| |||||||| ||||||||||| |||| Sbjct: 324 tcttgggcagcagcacggcctggatgttgggcaggacgccgccctgcgcgatggtcacgc 265
>ref|XM_474362.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1617 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 261 gacgccggccagcagcctcccga 283 ||||||||||||||||||||||| Sbjct: 489 gacgccggccagcagcctcccga 467
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 46.1 bits (23), Expect = 0.070 Identities = 74/91 (81%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| ||||| ||| | | |||||| ||||||||||||||| ||||| |||||| Sbjct: 38482 tcttgggaagcaggacctgctggatgttgggcagcacgccgccggcggcgatcgtgacgg 38423 Query: 266 cggccagcagcctcccgagctcctggtcgtt 296 | |||||||||| | ||||||| |||||| Sbjct: 38422 tgcccagcagcctgctcagctcctcgtcgtt 38392
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 46.1 bits (23), Expect = 0.070 Identities = 74/91 (81%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| ||||| ||| | | |||||| ||||||||||||||| ||||| |||||| Sbjct: 140950 tcttgggaagcaggacctgctggatgttgggcagcacgccgccggcggcgatcgtgacgg 141009 Query: 266 cggccagcagcctcccgagctcctggtcgtt 296 | |||||||||| | ||||||| |||||| Sbjct: 141010 tgcccagcagcctgctcagctcctcgtcgtt 141040
>ref|XM_425469.1| PREDICTED: Gallus gallus similar to histone 2, H2ac (LOC427895), mRNA Length = 390 Score = 46.1 bits (23), Expect = 0.070 Identities = 47/55 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggt 260 ||||||| |||||||| | | |||||| |||||||| ||||| ||||||||||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcagcaccccgccctgcgcgatggt 304
>ref|XM_425465.1| PREDICTED: Gallus gallus similar to histone 2, H2ac (LOC427891), mRNA Length = 390 Score = 46.1 bits (23), Expect = 0.070 Identities = 47/55 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggt 260 ||||||| |||||||| | | |||||| |||||||| ||||| ||||||||||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcagcaccccgccctgcgcgatggt 304
>ref|XM_425459.1| PREDICTED: Gallus gallus similar to histone 2, H2ac (LOC427885), mRNA Length = 918 Score = 46.1 bits (23), Expect = 0.070 Identities = 47/55 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggt 260 ||||||| |||||||| | | |||||| |||||||| ||||| ||||||||||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcagcaccccgccctgcgcgatggt 304
>ref|XM_425455.1| PREDICTED: Gallus gallus similar to histone 2, H2ac (LOC427881), mRNA Length = 534 Score = 46.1 bits (23), Expect = 0.070 Identities = 47/55 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggt 260 ||||||| |||||||| | | |||||| |||||||| ||||| ||||||||||| Sbjct: 502 tcttgggcagcagcacggcctggatgttgggcagcaccccgccctgcgcgatggt 448
>ref|XM_416195.1| PREDICTED: Gallus gallus similar to histone 2, H2ac (LOC417955), mRNA Length = 1220 Score = 46.1 bits (23), Expect = 0.070 Identities = 47/55 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggt 260 ||||||| |||||||| | | |||||| |||||||| ||||| ||||||||||| Sbjct: 1188 tcttgggcagcagcacggcctggatgttgggcagcaccccgccctgcgcgatggt 1134
>ref|XM_416193.1| PREDICTED: Gallus gallus similar to histone protein Hist2h3c1 (LOC417953), mRNA Length = 2271 Score = 46.1 bits (23), Expect = 0.070 Identities = 47/55 (85%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggt 260 ||||||| |||||||| | | |||||| |||||||| ||||| ||||||||||| Sbjct: 1173 tcttgggcagcagcacagcctggatgttgggcagcaccccgccctgcgcgatggt 1227
>ref|XM_416192.1| PREDICTED: Gallus gallus similar to germinal histone H4 gene (LOC417952), mRNA Length = 1374 Score = 46.1 bits (23), Expect = 0.070 Identities = 47/55 (85%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggt 260 ||||||| |||||||| | | |||||| |||||||| ||||| ||||||||||| Sbjct: 732 tcttgggcagcagcacggcctggatgttgggcagcaccccgccctgcgcgatggt 786
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 46.1 bits (23), Expect = 0.070 Identities = 74/91 (81%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| ||||| ||| | | |||||| ||||||||||||||| ||||| |||||| Sbjct: 181636 tcttgggaagcaggacctgctggatgttgggcagcacgccgccggcggcgatcgtgacgg 181577 Query: 266 cggccagcagcctcccgagctcctggtcgtt 296 | |||||||||| | ||||||| |||||| Sbjct: 181576 tgcccagcagcctgctcagctcctcgtcgtt 181546
>emb|X02218.1|GGHIS1 Chicken duplicated genes for histone H2A, H4 and a histone H3 gene Length = 8384 Score = 46.1 bits (23), Expect = 0.070 Identities = 47/55 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggt 260 ||||||| |||||||| | | |||||| |||||||| ||||| ||||||||||| Sbjct: 5289 tcttgggcagcagcacggcctggatgttgggcagcaccccgccctgcgcgatggt 5235
>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01, complete sequence Length = 133331 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 261 gacgccggccagcagcctcccga 283 ||||||||||||||||||||||| Sbjct: 11211 gacgccggccagcagcctcccga 11189
>emb|AJ245999.1|BNA245999 Brassica napus H2A gene for Histone H2A Length = 971 Score = 46.1 bits (23), Expect = 0.070 Identities = 50/59 (84%) Strand = Plus / Minus Query: 205 ctcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgac 263 |||||||| || || ||||||||||||||||| || || || ||| |||||||||||| Sbjct: 792 ctcttgggaagaagaaccgggttgatgttaggaagaactccaccgctcgcgatggtgac 734
>emb|V00413.1|GGH2AX Chicken gene for histone H2A with flanking regions Length = 843 Score = 46.1 bits (23), Expect = 0.070 Identities = 47/55 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggt 260 ||||||| |||||||| | | |||||| |||||||| ||||| ||||||||||| Sbjct: 691 tcttgggcagcagcacggcctggatgttgggcagcaccccgccctgcgcgatggt 637
>ref|XM_694570.1| PREDICTED: Danio rerio similar to histone H2A (LOC571016), partial mRNA Length = 374 Score = 46.1 bits (23), Expect = 0.070 Identities = 47/55 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggt 260 ||||||| |||||||| | | |||||| |||||||||||||| || |||||||| Sbjct: 348 tcttgggcagcagcacggcctggatgttgggcagcacgccgccctgagcgatggt 294
>dbj|AK064299.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-A07, full insert sequence Length = 724 Score = 46.1 bits (23), Expect = 0.070 Identities = 74/91 (81%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| ||||| ||| | | |||||| ||||||||||||||| ||||| |||||| Sbjct: 474 tcttgggaagcaggacctgctggatgttgggcagcacgccgccggcggcgatcgtgacgg 415 Query: 266 cggccagcagcctcccgagctcctggtcgtt 296 | |||||||||| | ||||||| |||||| Sbjct: 414 tgcccagcagcctgctcagctcctcgtcgtt 384
>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete sequence Length = 103264 Score = 46.1 bits (23), Expect = 0.070 Identities = 23/23 (100%) Strand = Plus / Minus Query: 261 gacgccggccagcagcctcccga 283 ||||||||||||||||||||||| Sbjct: 48674 gacgccggccagcagcctcccga 48652
>dbj|D11055.1|CHKH2A4H Gallus gallus gene for H2A histone, complete cds Length = 1028 Score = 46.1 bits (23), Expect = 0.070 Identities = 47/55 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggt 260 ||||||| |||||||| | | |||||| |||||||| ||||| ||||||||||| Sbjct: 689 tcttgggcagcagcacggcctggatgttgggcagcaccccgccctgcgcgatggt 635
>gb|U38933.1|GGU38933 Gallus gallus histone H2A (H2A-VIII) gene, complete cds Length = 740 Score = 46.1 bits (23), Expect = 0.070 Identities = 47/55 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggt 260 ||||||| |||||||| | | |||||| |||||||| ||||| ||||||||||| Sbjct: 536 tcttgggcagcagcacggcctggatgttgggcagcaccccgccctgcgcgatggt 482
>gb|U38932.1|GGU38932 Gallus gallus histone H2A (H2A-VII) gene, complete cds Length = 827 Score = 46.1 bits (23), Expect = 0.070 Identities = 47/55 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggt 260 ||||||| |||||||| | | |||||| |||||||| ||||| ||||||||||| Sbjct: 519 tcttgggcagcagcacagcctggatgttgggcagcaccccgccctgcgcgatggt 465
>gb|U38931.1|GGU38931 Gallus gallus histone H2A (H2A-VI) gene, complete cds Length = 743 Score = 46.1 bits (23), Expect = 0.070 Identities = 47/55 (85%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggt 260 ||||||| |||||||| | | |||||| |||||||| ||||| ||||||||||| Sbjct: 381 tcttgggcagcagcacggcctggatgttgggcagcaccccgccctgcgcgatggt 327
>gb|U95109.1|MSU95109 Mus spicilegus histone H2a pseudogene, complete sequence Length = 531 Score = 46.1 bits (23), Expect = 0.070 Identities = 59/71 (83%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| |||| |||||||| ||||||||||| |||| Sbjct: 385 tcttgggcagcagcacggcctggatgttgggcacgacgccgccctgcgcgatggtcacgc 326 Query: 266 cggccagcagc 276 | |||||||| Sbjct: 325 ggcccagcagc 315
>gb|J00864.1|CHKH2A2B Chicken histone H2A/H2B gene pair and flanks Length = 1564 Score = 46.1 bits (23), Expect = 0.070 Identities = 47/55 (85%) Strand = Plus / Plus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggt 260 ||||||| |||||||| | | |||||| |||||||| ||||| ||||||||||| Sbjct: 288 tcttgggcagcagcacggcctggatgttgggcagcaccccgccctgcgcgatggt 342
>ref|XM_865148.1| PREDICTED: Bos taurus similar to Histone H2A.1 (LOC613926), mRNA Length = 393 Score = 44.1 bits (22), Expect = 0.28 Identities = 49/58 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgac 263 |||| ||||||||||| | | |||||| ||||| |||||||| || ||||||||||| Sbjct: 358 tcttagggagcagcacggcctggatgttgggcaggacgccgccctgagcgatggtgac 301
>ref|NM_001040642.1| Gallus gallus similar to Histone H1.2 (H1d) (LOC417954), mRNA Length = 660 Score = 44.1 bits (22), Expect = 0.28 Identities = 34/38 (89%) Strand = Plus / Minus Query: 132 cttgtcggccttcttgggggacttggcggccttcttgg 169 |||| |||||||||||||| |||||| |||||||||| Sbjct: 531 cttggcggccttcttggggctcttggccgccttcttgg 494
>ref|XM_545426.2| PREDICTED: Canis familiaris similar to Histone H2A.l (H2A/l) (LOC488304), mRNA Length = 588 Score = 44.1 bits (22), Expect = 0.28 Identities = 37/42 (88%) Strand = Plus / Minus Query: 235 ggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 ||||| |||||||| ||||||||||| |||| | |||||||| Sbjct: 476 ggcaggacgccgccctgcgcgatggtcacgcggcccagcagc 435
>ref|XM_545421.1| PREDICTED: Canis familiaris similar to Histone H2A.1 (LOC488299), mRNA Length = 387 Score = 44.1 bits (22), Expect = 0.28 Identities = 49/58 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgac 263 ||||||| |||||||| | | |||||| |||| |||||||| |||||||||||||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaagacgccgccctgcgcgatggtgac 301
>ref|XM_545419.2| PREDICTED: Canis familiaris similar to Histone H2A.1 (LOC488297), mRNA Length = 393 Score = 44.1 bits (22), Expect = 0.28 Identities = 49/58 (84%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgac 263 ||||||| |||||||| | | |||||| |||| |||||||| |||||||||||||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaagacgccgccctgcgcgatggtgac 301
>emb|X01064.1|SGHIS2A3 Rainbow trout histone H2A and H3 genes Length = 2597 Score = 44.1 bits (22), Expect = 0.28 Identities = 52/62 (83%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 |||||||||||||||| | | |||||| ||||| || || || || ||||||||||||| Sbjct: 721 tcttggggagcagcactgcctggatgttgggcagaacaccaccctgagcgatggtgacgc 662 Query: 266 cg 267 || Sbjct: 661 cg 660
>emb|X01752.1|GGHISH1 Chicken histone H1 gene Length = 2201 Score = 44.1 bits (22), Expect = 0.28 Identities = 34/38 (89%) Strand = Plus / Minus Query: 132 cttgtcggccttcttgggggacttggcggccttcttgg 169 |||| |||||||||||||| |||||| |||||||||| Sbjct: 1189 cttggcggccttcttggggctcttggccgccttcttgg 1152
>gb|AC146538.2| Gasterosteus aculeatus clone CH213-118G22, complete sequence Length = 211945 Score = 44.1 bits (22), Expect = 0.28 Identities = 37/42 (88%) Strand = Plus / Minus Query: 235 ggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||||||||||| || |||||||| || ||| |||||||| Sbjct: 98621 ggcagcacgccgccctgagcgatggtcactccgcccagcagc 98580
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 ggccttcttgtcggccttcttg 147 |||||||||||||||||||||| Sbjct: 3848244 ggccttcttgtcggccttcttg 3848223
>ref|XM_525084.1| PREDICTED: Pan troglodytes similar to Histone H2A.1 (LOC469700), mRNA Length = 393 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| ||||| || ||||||||||| |||| | |||||||| Sbjct: 336 gatgttgggcaggacgccaccctgcgcgatggtcacgcggcccagcagc 288
>gb|BC001193.1| Homo sapiens histone 3, H2a, mRNA (cDNA clone MGC:3165 IMAGE:3355200), complete cds Length = 897 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| ||||| || ||||||||||| |||| | |||||||| Sbjct: 378 gatgttgggcaggacgccaccctgcgcgatggtcacgcggcccagcagc 330
>gb|BC082269.1| Homo sapiens histone 3, H2a, mRNA (cDNA clone MGC:99456 IMAGE:6671338), complete cds Length = 889 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| ||||| || ||||||||||| |||| | |||||||| Sbjct: 368 gatgttgggcaggacgccaccctgcgcgatggtcacgcggcccagcagc 320
>ref|NM_177688.2| Mus musculus H2A histone family, member J (H2afj), mRNA Length = 1754 Score = 42.1 bits (21), Expect = 1.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 200 ccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatgg 259 ||||| ||||||| |||||||| | | ||| || ||||| |||||||| |||||||||| Sbjct: 381 ccgtcttcttgggcagcagcacggcctggatattgggcaggacgccgccctgcgcgatgg 322 Query: 260 t 260 | Sbjct: 321 t 321
>ref|NM_033445.2| Homo sapiens histone 3, H2a (HIST3H2A), mRNA Length = 496 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| ||||| || ||||||||||| |||| | |||||||| Sbjct: 378 gatgttgggcaggacgccaccctgcgcgatggtcacgcggcccagcagc 330
>ref|XM_906486.2| PREDICTED: Mus musculus similar to H2A histone family, member J (LOC632401), mRNA Length = 1833 Score = 42.1 bits (21), Expect = 1.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 200 ccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatgg 259 ||||| ||||||| |||||||| | | ||| || ||||| |||||||| |||||||||| Sbjct: 460 ccgtcttcttgggcagcagcacggcctggatattgggcaggacgccgccctgcgcgatgg 401 Query: 260 t 260 | Sbjct: 400 t 400
>gb|AC122804.4| Mus musculus BAC clone RP23-296J10 from 6, complete sequence Length = 205659 Score = 42.1 bits (21), Expect = 1.1 Identities = 51/61 (83%) Strand = Plus / Plus Query: 200 ccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatgg 259 ||||| ||||||| |||||||| | | ||| || ||||| |||||||| |||||||||| Sbjct: 108580 ccgtcttcttgggcagcagcacggcctggatattgggcaggacgccgccctgcgcgatgg 108639 Query: 260 t 260 | Sbjct: 108640 t 108640
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 254 cgatggtgacgccggccagcagcct 278 |||||||||||||||| |||||||| Sbjct: 765511 cgatggtgacgccggcaagcagcct 765535
>emb|AL139288.15| Human DNA sequence from clone RP5-915N17 on chromosome 1q42.11-42.3, complete sequence Length = 151563 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| ||||| || ||||||||||| |||| | |||||||| Sbjct: 100883 gatgttgggcaggacgccaccctgcgcgatggtcacgcggcccagcagc 100835
>ref|NM_001030753.1| Gallus gallus histone H2A (H2A-IX), mRNA Length = 390 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggt 260 |||||| |||||||| ||||| ||||||||||| Sbjct: 336 gatgttgggcagcaccccgccctgcgcgatggt 304
>emb|BX908783.8| Zebrafish DNA sequence from clone DKEY-86M2 in linkage group 25, complete sequence Length = 216800 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 aaacagcaagcaatgttacaacaga 95 |||||||||||||||| |||||||| Sbjct: 200490 aaacagcaagcaatgtcacaacaga 200514
>emb|BX323796.14| Zebrafish DNA sequence from clone DKEY-106N21 in linkage group 25, complete sequence Length = 204383 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 aaacagcaagcaatgttacaacaga 95 |||||||||||||||| |||||||| Sbjct: 51767 aaacagcaagcaatgtcacaacaga 51743
>gb|DQ397869.1| Cenarchaeum symbiosum clone C04C05, complete sequence Length = 40287 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 261 gacgccggccagcagcctcccgagctcct 289 ||||| ||||||||||||| ||||||||| Sbjct: 1340 gacgcgggccagcagcctctcgagctcct 1312
>ref|NM_001024282.1| Rattus norvegicus Histone H2a (predicted) (RGD1564767_predicted), mRNA Length = 393 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggt 260 |||||| ||||| |||||||| ||||||||||| Sbjct: 336 gatgttgggcaggacgccgccctgcgcgatggt 304
>ref|XM_688696.1| PREDICTED: Danio rerio similar to histone H2A (LOC565417), mRNA Length = 384 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggt 260 |||||| |||||||||||||| || |||||||| Sbjct: 336 gatgttgggcagcacgccgccctgagcgatggt 304
>dbj|AK053755.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130307C13 product:HISTONE H2A homolog [Gallus gallus], full insert sequence Length = 1754 Score = 42.1 bits (21), Expect = 1.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 200 ccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatgg 259 ||||| ||||||| |||||||| | | ||| || ||||| |||||||| |||||||||| Sbjct: 381 ccgtcttcttgggcagcagcacggcctggatattgggcaggacgccgccctgcgcgatgg 322 Query: 260 t 260 | Sbjct: 321 t 321
>gb|BC099606.1| Mus musculus H2A histone family, member J, mRNA (cDNA clone MGC:118637 IMAGE:1383389), complete cds Length = 587 Score = 42.1 bits (21), Expect = 1.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 200 ccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatgg 259 ||||| ||||||| |||||||| | | ||| || ||||| |||||||| |||||||||| Sbjct: 438 ccgtcttcttgggcagcagcacggcctggatattgggcaggacgccgccctgcgcgatgg 379 Query: 260 t 260 | Sbjct: 378 t 378
>gb|BC024397.1| Mus musculus H2A histone family, member J, mRNA (cDNA clone MGC:36202 IMAGE:5055276), complete cds Length = 550 Score = 42.1 bits (21), Expect = 1.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 200 ccgtcctcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatgg 259 ||||| ||||||| |||||||| | | ||| || ||||| |||||||| |||||||||| Sbjct: 416 ccgtcttcttgggcagcagcacggcctggatattgggcaggacgccgccctgcgcgatgg 357 Query: 260 t 260 | Sbjct: 356 t 356
>gb|U38934.1|GGU38934 Gallus gallus histone H2A (H2A-IX) gene, complete cds Length = 575 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggt 260 |||||| |||||||| ||||| ||||||||||| Sbjct: 354 gatgttgggcagcaccccgccctgcgcgatggt 322
>gb|U95113.1|RNU95113 Rattus norvegicus histone H2a gene, complete cds Length = 575 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggt 260 |||||| ||||| |||||||| ||||||||||| Sbjct: 400 gatgttgggcaggacgccgccctgcgcgatggt 368
>gb|U16726.1|CRU16726 Chlamydomonas reinhardtii histone H1 (ch1), histone H2A (ch2a-IV), and histone H2B (ch2b-IV) genes, complete cds Length = 4502 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 129 cttcttgtcggccttcttgggggacttgg 157 |||||| ||||||||||||| |||||||| Sbjct: 1136 cttcttctcggccttcttggcggacttgg 1108
>gb|AY131974.1| Homo sapiens histone H2A (HIST3H2A) gene, complete cds Length = 1173 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 |||||| ||||| ||||| || ||||||||||| |||| | |||||||| Sbjct: 728 gatgttgggcaggacgccaccctgcgcgatggtcacgcggcccagcagc 680
>gb|BC060324.1| Homo sapiens histone 2, H2ac, mRNA (cDNA clone MGC:74460 IMAGE:3892650), complete cds Length = 446 Score = 40.1 bits (20), Expect = 4.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgac 263 ||||||||||| |||||||| || ||||||||||| Sbjct: 371 gatgttaggcaaaacgccgccctgggcgatggtgac 336
>ref|XM_511661.1| PREDICTED: Pan troglodytes similar to Galectin-3 binding protein precursor (Lectin galactoside-binding soluble 3 binding protein) (Mac-2 binding protein) (Mac-2 BP) (MAC2BP) (Tumor-associated antigen 90K) (LOC454863), mRNA Length = 1677 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 tggtgacgccggccagcagc 276 |||||||||||||||||||| Sbjct: 1181 tggtgacgccggccagcagc 1200
>ref|XM_527249.1| PREDICTED: Pan troglodytes similar to H2A histone family, member P (LOC471871), mRNA Length = 660 Score = 40.1 bits (20), Expect = 4.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 229 atgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 ||||| ||||| || ||||| |||||||||||||| || |||||||| Sbjct: 497 atgttgggcaggacaccgccctgcgcgatggtgacttcgcccagcagc 450
>gb|BC107354.1| Mus musculus histone 1, H2aa, mRNA (cDNA clone MGC:130330 IMAGE:40055855), complete cds Length = 391 Score = 40.1 bits (20), Expect = 4.3 Identities = 50/60 (83%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| ||||| || ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccaccctgcgcgatggtcacgc 299
>gb|BC107355.1| Mus musculus histone 1, H2aa, mRNA (cDNA clone MGC:130331 IMAGE:40055860), complete cds Length = 391 Score = 40.1 bits (20), Expect = 4.3 Identities = 50/60 (83%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| ||||| || ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccaccctgcgcgatggtcacgc 299
>ref|XM_513764.1| PREDICTED: Pan troglodytes LOC457261 (LOC457261), mRNA Length = 789 Score = 40.1 bits (20), Expect = 4.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgac 263 ||||||||||| |||||||| || ||||||||||| Sbjct: 741 gatgttaggcaagacgccgccctgggcgatggtgac 706
>ref|NM_003517.2| Homo sapiens histone 2, H2ac (HIST2H2AC), mRNA Length = 437 Score = 40.1 bits (20), Expect = 4.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgac 263 ||||||||||| |||||||| || ||||||||||| Sbjct: 336 gatgttaggcaaaacgccgccctgggcgatggtgac 301
>ref|NM_006632.1| Homo sapiens solute carrier family 17 (sodium phosphate), member 3 (SLC17A3), mRNA Length = 1795 Score = 40.1 bits (20), Expect = 4.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 229 atgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 ||||| ||||| || ||||| |||||||||||||| || |||||||| Sbjct: 236 atgttgggcaggacaccgccctgcgcgatggtgacttcgcccagcagc 189
>gb|AY648852.1| Homo sapiens histone H2A/r gene, complete cds Length = 1119 Score = 40.1 bits (20), Expect = 4.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgac 263 ||||||||||| |||||||| || ||||||||||| Sbjct: 709 gatgttaggcaaaacgccgccctgggcgatggtgac 674
>ref|NM_175658.1| Mus musculus histone 1, H2aa (Hist1h2aa), mRNA Length = 390 Score = 40.1 bits (20), Expect = 4.3 Identities = 50/60 (83%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | |||||| ||||| ||||| || ||||||||||| |||| Sbjct: 358 tcttgggcagcagcacggcctggatgttgggcaggacgccaccctgcgcgatggtcacgc 299
>gb|AY389715.1| Hyacinthus orientalis histone H2A-like protein mRNA, partial cds Length = 267 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 agcagcaccgggttgatgtt 233 |||||||||||||||||||| Sbjct: 22 agcagcaccgggttgatgtt 3
>gb|BC019308.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:4205 IMAGE:2823572), complete cds Length = 567 Score = 40.1 bits (20), Expect = 4.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgac 263 ||||||||||| |||||||| || ||||||||||| Sbjct: 374 gatgttaggcaagacgccgccctgggcgatggtgac 339
>gb|BC001629.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:2238 IMAGE:3536984), complete cds Length = 567 Score = 40.1 bits (20), Expect = 4.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgac 263 ||||||||||| |||||||| || ||||||||||| Sbjct: 374 gatgttaggcaagacgccgccctgggcgatggtgac 339
>ref|XM_583595.2| PREDICTED: Bos taurus similar to Histone H2A.1 (LOC538911), mRNA Length = 1488 Score = 40.1 bits (20), Expect = 4.3 Identities = 50/60 (83%) Strand = Plus / Minus Query: 206 tcttggggagcagcaccgggttgatgttaggcagcacgccgccgtgcgcgatggtgacgc 265 ||||||| |||||||| | | ||| |||||||| || ||||| ||||||||||| |||| Sbjct: 396 tcttgggcagcagcacggcctggatattaggcaggacaccgccctgcgcgatggtcacgc 337
>ref|NM_003516.2| Homo sapiens histone 2, H2aa (HIST2H2AA), mRNA Length = 534 Score = 40.1 bits (20), Expect = 4.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgac 263 ||||||||||| |||||||| || ||||||||||| Sbjct: 389 gatgttaggcaagacgccgccctgggcgatggtgac 354
>gb|AC167023.2| Mus musculus BAC clone RP23-21J7 from chromosome 7, complete sequence Length = 214762 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 tgggctccttctccgccgtc 204 |||||||||||||||||||| Sbjct: 177671 tgggctccttctccgccgtc 177652
>ref|XM_540292.2| PREDICTED: Canis familiaris similar to histone 2, H2ac (LOC483174), mRNA Length = 485 Score = 40.1 bits (20), Expect = 4.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgac 263 |||||| ||||| |||||||| || ||||||||||| Sbjct: 393 gatgttgggcaggacgccgccctgggcgatggtgac 358
>ref|XM_845715.1| PREDICTED: Canis familiaris similar to Histone H2A.o (H2A/o) (H2A.2) (H2a-615) (LOC608631), mRNA Length = 534 Score = 40.1 bits (20), Expect = 4.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgac 263 |||||| ||||| |||||||| || ||||||||||| Sbjct: 371 gatgttgggcaggacgccgccctgggcgatggtgac 336
>ref|XM_540286.2| PREDICTED: Canis familiaris similar to Histone H2A.o (H2A/o) (H2A.2) (H2a-615) (LOC483168), mRNA Length = 534 Score = 40.1 bits (20), Expect = 4.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgac 263 |||||| ||||| |||||||| || ||||||||||| Sbjct: 371 gatgttgggcaggacgccgccctgggcgatggtgac 336
>gb|AC125226.3| Mus musculus BAC clone RP23-39D21 from 7, complete sequence Length = 133624 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 tgggctccttctccgccgtc 204 |||||||||||||||||||| Sbjct: 43360 tgggctccttctccgccgtc 43341
>gb|AC143340.4| Medicago truncatula clone mth2-7f4, complete sequence Length = 114535 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tcaacaatttgctcaaatca 21 |||||||||||||||||||| Sbjct: 98432 tcaacaatttgctcaaatca 98413
>gb|AC137836.25| Medicago truncatula clone mth2-10f14, complete sequence Length = 140197 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tcaacaatttgctcaaatca 21 |||||||||||||||||||| Sbjct: 35136 tcaacaatttgctcaaatca 35117
>gb|AC139290.15| Medicago truncatula clone mth2-23f4, complete sequence Length = 127701 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tcaacaatttgctcaaatca 21 |||||||||||||||||||| Sbjct: 63949 tcaacaatttgctcaaatca 63930
>emb|AL591493.14| Human DNA sequence from clone RP11-196G18 on chromosome 1 Contains a ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) (UBE2D1) pseudogene, the FCGR1A gene for Fc fragment of IgG, high affinity Ia, receptor for (CD64), a novel gene similar to histone 2, H2be (HIST2H2BE), a novel gene similar to histone 2, H3c (HIST2H3C), the HIST2H4 gene for histone 2, H4, the HIST2H3C gene for histone 2, H3c, the HIST2H2AA gene for histone 2, H2aa, a histone 2, H2bd pseudogene (HIST2H2BD), a histone 2, H2bc pseudogene (HIST2H2BC), a novel gene similar to histone 2, H2aa (HIST2H2AA), a novel gene similar to histone 2, H3c (HIST2H3C), a novel gene similar to histone 1, H4 (HIST2H4), the HIST2H2BE gene for histone 2, H2be, the HIST2H2AC gene for histone 2, H2ac, the HIST2H2AB gene for histone 2, H2ab, a novel protein similar to histone 2, a novel gene, the SV2A gene for synaptic vesicle glycoprotein 2A, the 3' end of the SF3B4 gene for splicing factor 3b, subunit 4, 49kDa and five CpG islands, complete sequence Length = 188956 Score = 40.1 bits (20), Expect = 4.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgac 263 ||||||||||| |||||||| || ||||||||||| Sbjct: 149020 gatgttaggcaaaacgccgccctgggcgatggtgac 148985 Score = 40.1 bits (20), Expect = 4.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgac 263 ||||||||||| |||||||| || ||||||||||| Sbjct: 113176 gatgttaggcaagacgccgccctgggcgatggtgac 113141 Score = 40.1 bits (20), Expect = 4.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 228 gatgttaggcagcacgccgccgtgcgcgatggtgac 263 ||||||||||| |||||||| || ||||||||||| Sbjct: 104090 gatgttaggcaagacgccgccctgggcgatggtgac 104125
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 tggtgacgccggccagcagc 276 |||||||||||||||||||| Sbjct: 1718253 tggtgacgccggccagcagc 1718234
>emb|AL138726.12| Human DNA sequence from clone RP1-139G21 on chromosome 6 Contains (part of) the SLC17A1, SLC17A2 and SLC17A3 genes for the sodium phosphate solute carrier family 17 members 1, 2 and 3 and a H2A (histone 2A) pseudogene, complete sequence Length = 136646 Score = 40.1 bits (20), Expect = 4.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 229 atgttaggcagcacgccgccgtgcgcgatggtgacgccggccagcagc 276 ||||| ||||| || ||||| |||||||||||||| || |||||||| Sbjct: 45419 atgttgggcaggacaccgccctgcgcgatggtgacttcgcccagcagc 45372
>emb|AL050344.31|HSJ799D16 Human DNA sequence from clone RP4-799D16 on chromosome 1p34.3-36.1 Contains the 3' end of a novel gene, complete sequence Length = 127109 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 ggcgaggagcaggtgcctgg 322 |||||||||||||||||||| Sbjct: 51539 ggcgaggagcaggtgcctgg 51558
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 40.1 bits (20), Expect = 4.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 153 cttggcggccttcttgggcgacttgccctcct 184 ||||||| ||||||||||||||| || ||||| Sbjct: 67556 cttggcgcccttcttgggcgactcgctctcct 67525
>ref|XM_967564.1| PREDICTED: Tribolium castaneum similar to CG4356-PA, isoform A (LOC661406), mRNA Length = 1794 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 gccttcttgtcggccttctt 146 |||||||||||||||||||| Sbjct: 1520 gccttcttgtcggccttctt 1501
>emb|BX072218.1|CNS09RVY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAD1AC06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 468 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 ccttctccgccgtcctcttgggga 214 ||||||||||| |||||||||||| Sbjct: 132 ccttctccgccttcctcttgggga 155
>emb|BX038155.1|CNS091LR Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB2BF12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 339 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 ccttctccgccgtcctcttgggga 214 ||||||||||| |||||||||||| Sbjct: 132 ccttctccgccttcctcttgggga 155 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,651,175 Number of Sequences: 3902068 Number of extensions: 2651175 Number of successful extensions: 51230 Number of sequences better than 10.0: 287 Number of HSP's better than 10.0 without gapping: 294 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 50210 Number of HSP's gapped (non-prelim): 991 length of query: 329 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 307 effective length of database: 17,147,199,772 effective search space: 5264190330004 effective search space used: 5264190330004 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)