ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast48a07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC121116.7| Mus musculus chromosome 8, clone RP23-267D22, com... 48 0.025
2gb|AC118207.13| Mus musculus chromosome 8, clone RP24-215A12, co... 48 0.025
3emb|BX294175.5| Zebrafish DNA sequence from clone DKEY-281I8 in ... 46 0.098
4emb|AL935050.11| Zebrafish DNA sequence from clone CH211-59B1, c... 46 0.098
5emb|BX248110.8| Zebrafish DNA sequence from clone DKEY-122I21 in... 46 0.098
6emb|BX001030.7| Zebrafish DNA sequence from clone CH211-234P6 in... 46 0.098
7emb|AL954384.11| Zebrafish DNA sequence from clone CH211-146L13 ... 44 0.39
8gb|DQ180203.1| Neotorularia humilis RNA polymerase C1 (rpoC1) ge... 42 1.5
9gb|DQ180202.1| Euclidium syriacum RNA polymerase C1 (rpoC1) gene... 42 1.5
10gb|DQ180201.1| Leiospora sp. Lys20 RNA polymerase C1 (rpoC1) gen... 42 1.5
11gb|DQ180186.1| Matthiola chorassanica RNA polymerase C1 (rpoC1) ... 42 1.5
12ref|XM_822709.1| Trypanosoma brucei TREU927 hypothetical protein... 42 1.5
13emb|CR846084.6| Zebrafish DNA sequence from clone DKEYP-121E7 in... 42 1.5
14gb|AF549213.1| Haemophilus influenzae strain 1007 partially dupl... 42 1.5
15gb|AF549212.1| Haemophilus influenzae strain 373 capsule locus, ... 42 1.5
16gb|AF549210.1| Haemophilus influenzae strain GA834 capsule locus... 42 1.5
17emb|BX936308.13| Zebrafish DNA sequence from clone CH211-152F6 i... 42 1.5
18emb|BX511308.11| Zebrafish DNA sequence from clone DKEYP-118E10 ... 42 1.5
19emb|BX323858.12| Zebrafish DNA sequence from clone DKEY-102F10 i... 42 1.5
20emb|BX324143.9| Zebrafish DNA sequence from clone CH211-197D1 in... 42 1.5
21gb|DQ368335.1| Haemophilus influenzae genotype I capsule gene lo... 42 1.5
22gb|DQ368334.1| Haemophilus influenzae genotype II capsule gene l... 42 1.5
23gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 42 1.5
24emb|X78559.1|HISBCAL H.influenzae DNA for serotype b capsulation... 42 1.5
25emb|BX927400.10| Zebrafish DNA sequence from clone CH211-195K18 ... 42 1.5
26dbj|AP001674.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 1.5
27emb|AL935128.13| Zebrafish DNA sequence from clone CH211-183D5 i... 42 1.5
28gb|AC136640.2| Mus musculus BAC clone RP23-2E24 from 12, complet... 42 1.5
29emb|AL928973.3| Mouse DNA sequence from clone RP23-259J7 on chro... 42 1.5
30dbj|AP001538.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 42 1.5
31ref|XM_369647.1| Magnaporthe grisea 70-15 chromosome III hypothe... 40 6.1
32emb|BX088589.14| Zebrafish DNA sequence from clone DKEY-27E7 in ... 40 6.1
33emb|CR381531.7| Zebrafish DNA sequence from clone DKEY-190G6 in ... 40 6.1
34ref|XM_739913.1| Plasmodium chabaudi chabaudi GDP-mannose 4,6-de... 40 6.1
35emb|AL035408.5|HS55I10 Human DNA sequence from clone CTA-55I10 o... 40 6.1
36gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome 40 6.1
37emb|AL645527.20| Mouse DNA sequence from clone RP23-26L6 on chro... 40 6.1
38emb|AL808019.6| Zebrafish DNA sequence from clone CH211-258D20 i... 40 6.1
39emb|CR735103.4| Zebrafish DNA sequence from clone CH211-13L14 in... 40 6.1
40gb|AC105009.13| Homo sapiens chromosome 8, clone RP11-188K5, com... 40 6.1
41gb|AC025822.7| Homo sapiens chromosome 10 clone RP11-433J20, com... 40 6.1
42ref|XM_397469.2| PREDICTED: Apis mellifera similar to CG10238-PA... 40 6.1
43dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
44gb|DQ054598.1| Homo sapiens eosinophil peroxidase (EPX) gene, co... 40 6.1
45gb|AC005866.4| Homo sapiens 12 BAC RP11-407G6 (Roswell Park Canc... 40 6.1
46dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.1
47emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on ch... 40 6.1
48gb|AC005962.1|AC005962 Homo sapiens chromosome 17, clone hRPK.50... 40 6.1
49gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete... 40 6.1
50gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
51emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126... 40 6.1
52dbj|AP004956.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 6.1 
>gb|AC121116.7| Mus musculus chromosome 8, clone RP23-267D22, complete sequence
          Length = 200891

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 126  acacgggcacacacacactctctc 149
            ||||||||||||||||||||||||
Sbjct: 4180 acacgggcacacacacactctctc 4203
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>gb|AC118207.13| Mus musculus chromosome 8, clone RP24-215A12, complete sequence
          Length = 187453

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 126    acacgggcacacacacactctctc 149
              ||||||||||||||||||||||||
Sbjct: 172012 acacgggcacacacacactctctc 172035
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>emb|BX294175.5| Zebrafish DNA sequence from clone DKEY-281I8 in linkage group 1, complete
              sequence
          Length = 165355

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 137    cacacactctctcggggaagcgc 159
              |||||||||||||||||||||||
Sbjct: 135251 cacacactctctcggggaagcgc 135229
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>emb|AL935050.11| Zebrafish DNA sequence from clone CH211-59B1, complete sequence
          Length = 177773

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 133   cacacacacactctctcggggaagcgc 159
             |||||||||||||||||||| ||||||
Sbjct: 93545 cacacacacactctctcgggtaagcgc 93519
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>emb|BX248110.8| Zebrafish DNA sequence from clone DKEY-122I21 in linkage group 20,
             complete sequence
          Length = 78928

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 133   cacacacacactctctcggggaagcgc 159
             |||||||||||||||||||| ||||||
Sbjct: 19819 cacacacacactctctcgggcaagcgc 19793
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>emb|BX001030.7| Zebrafish DNA sequence from clone CH211-234P6 in linkage group 24,
              complete sequence
          Length = 156560

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 127    cacgggcacacacacactctctc 149
              |||||||||||||||||||||||
Sbjct: 137927 cacgggcacacacacactctctc 137905
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>emb|AL954384.11| Zebrafish DNA sequence from clone CH211-146L13 in linkage group 6,
            complete sequence
          Length = 162560

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 134  acacacacactctctcggggaagcgc 159
            ||||||||||||||||||| ||||||
Sbjct: 5232 acacacacactctctcgggcaagcgc 5207
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>gb|DQ180203.1| Neotorularia humilis RNA polymerase C1 (rpoC1) gene, intron;
           chloroplast
          Length = 691

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 21  agtacaaaccaaccaacattt 41
           |||||||||||||||||||||
Sbjct: 113 agtacaaaccaaccaacattt 133
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>gb|DQ180202.1| Euclidium syriacum RNA polymerase C1 (rpoC1) gene, intron;
           chloroplast
          Length = 679

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 21  agtacaaaccaaccaacattt 41
           |||||||||||||||||||||
Sbjct: 113 agtacaaaccaaccaacattt 133
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>gb|DQ180201.1| Leiospora sp. Lys20 RNA polymerase C1 (rpoC1) gene, intron;
           chloroplast
          Length = 669

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 21  agtacaaaccaaccaacattt 41
           |||||||||||||||||||||
Sbjct: 113 agtacaaaccaaccaacattt 133
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>gb|DQ180186.1| Matthiola chorassanica RNA polymerase C1 (rpoC1) gene, intron;
           chloroplast
          Length = 681

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 21  agtacaaaccaaccaacattt 41
           |||||||||||||||||||||
Sbjct: 107 agtacaaaccaaccaacattt 127
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>ref|XM_822709.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.389.0290)
           partial mRNA
          Length = 1032

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 406 ggcgaggtcgctcagagctgg 426
           |||||||||||||||||||||
Sbjct: 817 ggcgaggtcgctcagagctgg 837
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>emb|CR846084.6| Zebrafish DNA sequence from clone DKEYP-121E7 in linkage group 3,
             complete sequence
          Length = 77230

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 53    aaaaagtcatgtaaaagtaagccaa 77
             |||||||||||||||||||| ||||
Sbjct: 25355 aaaaagtcatgtaaaagtaacccaa 25379
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>gb|AF549213.1| Haemophilus influenzae strain 1007 partially duplicated capsule locus,
             complete sequence
          Length = 35989

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 48    ctctcaaaaagtcatgtaaaagtaa 72
             |||||||||||| ||||||||||||
Sbjct: 27733 ctctcaaaaagtgatgtaaaagtaa 27757



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 48   ctctcaaaaagtcatgtaaaagtaa 72
            |||||||||||| ||||||||||||
Sbjct: 9635 ctctcaaaaagtgatgtaaaagtaa 9659
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>gb|AF549212.1| Haemophilus influenzae strain 373 capsule locus, complete sequence
          Length = 17917

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 48   ctctcaaaaagtcatgtaaaagtaa 72
            |||||||||||| ||||||||||||
Sbjct: 9635 ctctcaaaaagtgatgtaaaagtaa 9659
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>gb|AF549210.1| Haemophilus influenzae strain GA834 capsule locus, complete sequence
          Length = 17891

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 48   ctctcaaaaagtcatgtaaaagtaa 72
            |||||||||||| ||||||||||||
Sbjct: 9634 ctctcaaaaagtgatgtaaaagtaa 9658
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>emb|BX936308.13| Zebrafish DNA sequence from clone CH211-152F6 in linkage group 3,
             complete sequence
          Length = 110020

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 53    aaaaagtcatgtaaaagtaagccaa 77
             |||||||||||||||||||| ||||
Sbjct: 16970 aaaaagtcatgtaaaagtaacccaa 16994
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>emb|BX511308.11| Zebrafish DNA sequence from clone DKEYP-118E10 in linkage group 15,
              complete sequence
          Length = 123109

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 135    cacacacactctctcggggaagcgc 159
              |||||||||||||||||| ||||||
Sbjct: 101330 cacacacactctctcgggcaagcgc 101306
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>emb|BX323858.12| Zebrafish DNA sequence from clone DKEY-102F10 in linkage group 14,
              complete sequence
          Length = 184463

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 135    cacacacactctctcggggaagcgc 159
              |||||||||||||||||| ||||||
Sbjct: 118625 cacacacactctctcgggcaagcgc 118649
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>emb|BX324143.9| Zebrafish DNA sequence from clone CH211-197D1 in linkage group 3,
             complete sequence
          Length = 105743

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 135   cacacacactctctcggggaagcgc 159
             |||||||||||||||||| ||||||
Sbjct: 89949 cacacacactctctcgggcaagcgc 89973
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>gb|DQ368335.1| Haemophilus influenzae genotype I capsule gene locus, complete sequence
          Length = 35934

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 48    ctctcaaaaagtcatgtaaaagtaa 72
             |||||||||||| ||||||||||||
Sbjct: 27730 ctctcaaaaagtgatgtaaaagtaa 27754



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 48   ctctcaaaaagtcatgtaaaagtaa 72
            |||||||||||| ||||||||||||
Sbjct: 9606 ctctcaaaaagtgatgtaaaagtaa 9630
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>gb|DQ368334.1| Haemophilus influenzae genotype II capsule gene locus, complete
             sequence
          Length = 35881

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 48    ctctcaaaaagtcatgtaaaagtaa 72
             |||||||||||| ||||||||||||
Sbjct: 27704 ctctcaaaaagtgatgtaaaagtaa 27728



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 48   ctctcaaaaagtcatgtaaaagtaa 72
            |||||||||||| ||||||||||||
Sbjct: 9606 ctctcaaaaagtgatgtaaaagtaa 9630
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 36      acatttggacgcctctcaaaa 56
               |||||||||||||||||||||
Sbjct: 1396912 acatttggacgcctctcaaaa 1396892
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>emb|X78559.1|HISBCAL H.influenzae DNA for serotype b capsulation locus
          Length = 8640

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 48   ctctcaaaaagtcatgtaaaagtaa 72
            |||||||||||| ||||||||||||
Sbjct: 6009 ctctcaaaaagtgatgtaaaagtaa 6033
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>emb|BX927400.10| Zebrafish DNA sequence from clone CH211-195K18 in linkage group 19,
             complete sequence
          Length = 172655

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 135   cacacacactctctcggggaagcgc 159
             |||||||||||||||||| ||||||
Sbjct: 50151 cacacacactctctcgggcaagcgc 50127
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>dbj|AP001674.1| Homo sapiens genomic DNA, chromosome 21q, section 18/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 52    caaaaagtcatgtaaaagtaa 72
             |||||||||||||||||||||
Sbjct: 68995 caaaaagtcatgtaaaagtaa 68975
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>emb|AL935128.13| Zebrafish DNA sequence from clone CH211-183D5 in linkage group 7,
            complete sequence
          Length = 152770

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 135  cacacacactctctcggggaagcgc 159
            |||||||||||||||||| ||||||
Sbjct: 8857 cacacacactctctcgggcaagcgc 8881
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>gb|AC136640.2| Mus musculus BAC clone RP23-2E24 from 12, complete sequence
          Length = 199358

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 214    tacacaaagctagcagctctc 234
              |||||||||||||||||||||
Sbjct: 151579 tacacaaagctagcagctctc 151599
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>emb|AL928973.3| Mouse DNA sequence from clone RP23-259J7 on chromosome 2, complete
             sequence
          Length = 157458

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 126   acacgggcacacacacactct 146
             |||||||||||||||||||||
Sbjct: 75357 acacgggcacacacacactct 75377
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>dbj|AP001538.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B853K11,
             LL56-APP region, complete sequence
          Length = 174019

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 52    caaaaagtcatgtaaaagtaa 72
             |||||||||||||||||||||
Sbjct: 77784 caaaaagtcatgtaaaagtaa 77764
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>ref|XM_369647.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
           (MG05817.4) partial mRNA
          Length = 1578

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 215 acacaaagctagcagctctc 234
           ||||||||||||||||||||
Sbjct: 285 acacaaagctagcagctctc 266
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>emb|BX088589.14| Zebrafish DNA sequence from clone DKEY-27E7 in linkage group 12, complete
              sequence
          Length = 242558

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 132    gcacacacacactctctcggggaagcgc 159
              |||||||||||| |||||||| ||||||
Sbjct: 216489 gcacacacacacactctcgggcaagcgc 216516
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>emb|CR381531.7| Zebrafish DNA sequence from clone DKEY-190G6 in linkage group 23,
             complete sequence
          Length = 149672

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    aaaaagtcatgtaaaagtaa 72
             ||||||||||||||||||||
Sbjct: 88471 aaaaagtcatgtaaaagtaa 88452
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>ref|XM_739913.1| Plasmodium chabaudi chabaudi GDP-mannose 4,6-dehydratase,
           (PC000770.03.0) partial mRNA
          Length = 1086

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  aaagtcatgtaaaagtaagc 74
           ||||||||||||||||||||
Sbjct: 245 aaagtcatgtaaaagtaagc 264
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>emb|AL035408.5|HS55I10 Human DNA sequence from clone CTA-55I10 on chromosome 1q32.2-41
            Contains the 3' end of a novel gene and a novel gene,
            complete sequence
          Length = 90429

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 221  agctagcagctctcaaggac 240
            ||||||||||||||||||||
Sbjct: 5436 agctagcagctctcaaggac 5417
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>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome
          Length = 1842899

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 55      aaagtcatgtaaaagtaagc 74
               ||||||||||||||||||||
Sbjct: 1159304 aaagtcatgtaaaagtaagc 1159323
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>emb|AL645527.20| Mouse DNA sequence from clone RP23-26L6 on chromosome 11 Contains the
             Vamp2 gene for vesicle-associated membrane 2, the Per1
             gene for period homolog 1 (Drosophila), the Hes7 gene for
             hairy and enhancer of split 7 (Drosophila), the Aloxe3
             gene for arachidonate lipoxygenase 3, the Alox12b gene for
             arachidonate 12-lipoxygenase 12R type, the Alox15b gene
             for arachidonate 15-lipoxygenase second type, the Gucy2e
             gene for guanylate cyclase 2e, a novel gene, the gene for
             LYST-interacting protein LIP8 (Lip8-pending), the gene for
             the likely ortholog of H. sapiens trafficking protein
             particle complex 1 (TRAPPC1)), the Kcnab3 gene for
             potassium voltage-gated channel shaker-related subfamily
             beta member 3, a novel gene, the 3' end of the Chd3 gene
             for chromodomain helicase DNA binding protein 3 and six
             CpG islands, complete sequence
          Length = 261224

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   acacgggcacacacacactctctc 149
             |||||| |||||||||||||||||
Sbjct: 40360 acacggacacacacacactctctc 40337
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>emb|AL808019.6| Zebrafish DNA sequence from clone CH211-258D20 in linkage group 7
             Contains a gene for a novel actinin and four CpG islands,
             complete sequence
          Length = 159698

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   acacgggcacacacacactctctc 149
             ||||| ||||||||||||||||||
Sbjct: 10172 acacgcgcacacacacactctctc 10149
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>emb|CR735103.4| Zebrafish DNA sequence from clone CH211-13L14 in linkage group 12,
             complete sequence
          Length = 126042

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 132   gcacacacacactctctcggggaagcgc 159
             |||||||||||| |||||||| ||||||
Sbjct: 73154 gcacacacacacactctcgggcaagcgc 73127
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>gb|AC105009.13| Homo sapiens chromosome 8, clone RP11-188K5, complete sequence
          Length = 175936

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   acacgggcacacacacactc 145
             ||||||||||||||||||||
Sbjct: 71719 acacgggcacacacacactc 71738
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>gb|AC025822.7| Homo sapiens chromosome 10 clone RP11-433J20, complete sequence
          Length = 220031

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 358    aacactgacagacaccactc 377
              ||||||||||||||||||||
Sbjct: 145525 aacactgacagacaccactc 145544
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>ref|XM_397469.2| PREDICTED: Apis mellifera similar to CG10238-PA (LOC414033), mRNA
          Length = 1439

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 51  tcaaaaagtcatgtaaaagt 70
           ||||||||||||||||||||
Sbjct: 972 tcaaaaagtcatgtaaaagt 991
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 126    acacgggcacacacacactctctc 149
              ||||| ||||||||||||||||||
Sbjct: 870843 acacgcgcacacacacactctctc 870866
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>gb|DQ054598.1| Homo sapiens eosinophil peroxidase (EPX) gene, complete cds
          Length = 15329

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 126  acacgggcacacacacactctctc 149
            ||||| ||||||||||||||||||
Sbjct: 4626 acacgtgcacacacacactctctc 4649
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>gb|AC005866.4| Homo sapiens 12 BAC RP11-407G6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 119388

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 126   acacgggcacacacacactctctc 149
             ||||| ||||||||||||||||||
Sbjct: 11040 acacgcgcacacacacactctctc 11063
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 149     cggggaagcgcacctccaga 168
               ||||||||||||||||||||
Sbjct: 8112341 cggggaagcgcacctccaga 8112360
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>emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on chromosome 17, complete
              sequence
          Length = 231197

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 127    cacgggcacacacacactct 146
              ||||||||||||||||||||
Sbjct: 202287 cacgggcacacacacactct 202306
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>gb|AC005962.1|AC005962 Homo sapiens chromosome 17, clone hRPK.506_H_21, complete sequence
          Length = 162083

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 126    acacgggcacacacacactctctc 149
              ||||| ||||||||||||||||||
Sbjct: 117298 acacgtgcacacacacactctctc 117321
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>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence
          Length = 412348

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 403    ggcggcgaggtcgctcagag 422
              ||||||||||||||||||||
Sbjct: 223156 ggcggcgaggtcgctcagag 223137
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 126    acacgggcacacacacactctctc 149
              ||||| ||||||||||||||||||
Sbjct: 870843 acacgcgcacacacacactctctc 870866
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>emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126_F08 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 134217

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 126  acacgggcacacacacactctctc 149
            ||||| ||||||||||||||||||
Sbjct: 8428 acacgcgcacacacacactctctc 8451
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>dbj|AP004956.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34I04, TM0133,
             complete sequence
          Length = 106411

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    aaaagtcatgtaaaagtaag 73
             ||||||||||||||||||||
Sbjct: 63629 aaaagtcatgtaaaagtaag 63648


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,541,108
Number of Sequences: 3902068
Number of extensions: 12541108
Number of successful extensions: 93984
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93757
Number of HSP's gapped (non-prelim): 225
length of query: 450
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 428
effective length of database: 17,147,199,772
effective search space: 7339001502416
effective search space used: 7339001502416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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