>emb|AL109756.9|HSDJ617C6 Human DNA sequence from clone RP4-617C6 on chromosome 1p13.3-22.1
             Contains a novel gene, complete sequence
          Length = 111491

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 6     aaagtccaaagtaatgaaatt 26
             |||||||||||||||||||||
Sbjct: 92800 aaagtccaaagtaatgaaatt 92820

>emb|AL079334.7|HSJ300O13 Human DNA sequence from clone RP1-300O13 on chromosome Xq22.1-24
            Contains part of the AMMECR1 gene for Alport syndrome
            (mental retardation, midface hypoplasia and
            elliptocytosis, chromosomal region gene 1) (FLJ341111),
            complete sequence
          Length = 63660

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 6    aaagtccaaagtaatgaaatt 26
            |||||||||||||||||||||
Sbjct: 3081 aaagtccaaagtaatgaaatt 3061

>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome
          Length = 1884661

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 137    acaactgctacaacaccagca 157
              |||||||||||||||||||||
Sbjct: 187000 acaactgctacaacaccagca 186980

>emb|AL627344.8| Human DNA sequence from clone RP11-39H24 on chromosome 13, complete
             sequence
          Length = 97057

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   atgattaaaacccttaataa 131
             ||||||||||||||||||||
Sbjct: 26015 atgattaaaacccttaataa 25996

>ref|XM_782830.1| PREDICTED: Strongylocentrotus purpuratus similar to CG4006-PA,
            isoform A (LOC582897), mRNA
          Length = 1077

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 55   tttcacacaagagcgcgcac 74
            ||||||||||||||||||||
Sbjct: 1020 tttcacacaagagcgcgcac 1039

>gb|AC058784.17|AC058784 Homo sapiens chromosome 13 clone RP11-288O16, complete sequence
          Length = 163781

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    atgattaaaacccttaataa 131
              ||||||||||||||||||||
Sbjct: 125752 atgattaaaacccttaataa 125771

>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome
          Length = 1895994

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 144     ctacaacaccagcacaaatt 163
               ||||||||||||||||||||
Sbjct: 1715372 ctacaacaccagcacaaatt 1715353

>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome
          Length = 1892819

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   ctacaacaccagcacaaatt 163
             ||||||||||||||||||||
Sbjct: 79459 ctacaacaccagcacaaatt 79478

>emb|AL806516.4| Mouse DNA sequence from clone RP23-453N20 on chromosome X, complete
             sequence
          Length = 179534

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    aagttgacataagtttcaca 61
             ||||||||||||||||||||
Sbjct: 86401 aagttgacataagtttcaca 86382

>gb|AC145809.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0023E20, complete sequence
          Length = 130827

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 89    tatggtacgtacgtacgta 107
             |||||||||||||||||||
Sbjct: 42661 tatggtacgtacgtacgta 42679

>gb|DQ183082.1| Zea mays clone A-RGA14 resistance gene analog-like gene, partial
           sequence
          Length = 413

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 123 ccttaataatgatgacaac 141
           |||||||||||||||||||
Sbjct: 88  ccttaataatgatgacaac 70

>emb|CT009736.8| Mouse DNA sequence from clone RP23-99F22 on chromosome 17, complete
             sequence
          Length = 210326

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 5     caaagtccaaagtaatgaaattg 27
             ||||||||||||||||| |||||
Sbjct: 33237 caaagtccaaagtaatgcaattg 33259

>gb|AC123028.4| Mus musculus BAC clone RP24-553H21 from chromosome 10, complete
             sequence
          Length = 175143

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 143   gctacaacaccagcacaaattaa 165
             ||||||||||||||| |||||||
Sbjct: 42286 gctacaacaccagcataaattaa 42264

>gb|AC096992.15| Homo sapiens 3 BAC RP11-731C17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 50966

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 120   aacccttaataatgatgac 138
             |||||||||||||||||||
Sbjct: 17857 aacccttaataatgatgac 17875

>gb|AC158799.8| Mus musculus  BAC RP24-430K11 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 161705

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 143   gctacaacaccagcacaaattaa 165
             ||||||||||||||| |||||||
Sbjct: 50462 gctacaacaccagcataaattaa 50484

>gb|AC099794.2| Homo sapiens chromosome 1 clone RP4-771M4, complete sequence
          Length = 134341

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     aagtccaaagtaatgaaat 25
             |||||||||||||||||||
Sbjct: 36332 aagtccaaagtaatgaaat 36314

>gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0042K08, from chromosome 2, complete sequence
          Length = 164628

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 89     tatggtacgtacgtacgta 107
              |||||||||||||||||||
Sbjct: 118794 tatggtacgtacgtacgta 118812

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 89       tatggtacgtacgtacgta 107
                |||||||||||||||||||
Sbjct: 14046740 tatggtacgtacgtacgta 14046758

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 89      tatggtacgtacgtacgta 107
               |||||||||||||||||||
Sbjct: 7320508 tatggtacgtacgtacgta 7320490

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 89       tatggtacgtacgtacgta 107
                |||||||||||||||||||
Sbjct: 23085293 tatggtacgtacgtacgta 23085275

>dbj|AP003048.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0710A02
          Length = 157201

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 89    tatggtacgtacgtacgta 107
             |||||||||||||||||||
Sbjct: 17452 tatggtacgtacgtacgta 17434

>emb|AL929096.5| Zebrafish DNA sequence from clone DKEY-216E9 in linkage group 17,
              complete sequence
          Length = 192592

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 144    ctacaacaccagcacaaat 162
              |||||||||||||||||||
Sbjct: 154108 ctacaacaccagcacaaat 154126

>gb|AC154342.2| Mus musculus BAC clone RP23-227D10 from 17, complete sequence
          Length = 199709

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 5     caaagtccaaagtaatgaaattg 27
             ||||||||||||||||| |||||
Sbjct: 69108 caaagtccaaagtaatgcaattg 69130

>emb|CR848710.10| Zebrafish DNA sequence from clone DKEY-177E13 in linkage group 2,
             complete sequence
          Length = 59916

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     aagtccaaagtaatgaaat 25
             |||||||||||||||||||
Sbjct: 24176 aagtccaaagtaatgaaat 24158

>emb|AL133279.7|CNS01DUM Human chromosome 14 DNA sequence BAC R-753D20 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 197224

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 10     tccaaagtaatgaaattgc 28
              |||||||||||||||||||
Sbjct: 165743 tccaaagtaatgaaattgc 165725

>gb|AC119267.8| Mus musculus chromosome 8, clone RP24-322H19, complete sequence
          Length = 191277

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 65    gagcgcgcacatacacttg 83
             |||||||||||||||||||
Sbjct: 91683 gagcgcgcacatacacttg 91701

>dbj|AP001786.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-176J24, complete
             sequences
          Length = 171744

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 46    tgacataagtttcacacaa 64
             |||||||||||||||||||
Sbjct: 14420 tgacataagtttcacacaa 14438

>dbj|AP001521.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-644A8, complete
              sequences
          Length = 179098

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 46     tgacataagtttcacacaa 64
              |||||||||||||||||||
Sbjct: 120818 tgacataagtttcacacaa 120836

>gb|U54802.1|MMLICE02 Mus musculus cysteine protease (Lice) gene, exon 2
          Length = 1223

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 65  gagcgcgcacatacacttg 83
           |||||||||||||||||||
Sbjct: 852 gagcgcgcacatacacttg 834

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 89      tatggtacgtacgtacgta 107
               |||||||||||||||||||
Sbjct: 7390594 tatggtacgtacgtacgta 7390576

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 89       tatggtacgtacgtacgta 107
                |||||||||||||||||||
Sbjct: 14001020 tatggtacgtacgtacgta 14001038

>emb|AL732536.5|CNS08C9B Oryza sativa chromosome 12, . BAC OJ1111_F12 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 115351

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 89    tatggtacgtacgtacgta 107
             |||||||||||||||||||
Sbjct: 75416 tatggtacgtacgtacgta 75434

>gb|AC003658.1|AC003658 Homo sapiens Xp22 BAC GS-607H18 (Genome Systems Human BAC library)
             complete sequence
          Length = 119393

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 115   attaaaacccttaataatgatga 137
             |||||||||||||| ||||||||
Sbjct: 63446 attaaaacccttaaaaatgatga 63468


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,280,853
Number of Sequences: 3902068
Number of extensions: 1280853
Number of successful extensions: 104102
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103792
Number of HSP's gapped (non-prelim): 310
length of query: 167
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 145
effective length of database: 17,147,199,772
effective search space: 2486343966940
effective search space used: 2486343966940
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)