>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (Floral organ
           regulator 1)
          Length = 332

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 18/25 (72%), Positives = 19/25 (76%)
 Frame = -2

Query: 433 MRHGCKPYEHNLCHRGAPLESSCHQ 359
           +RHGCKPYEHN C  GAPL   CHQ
Sbjct: 308 IRHGCKPYEHNQCAGGAPL-GGCHQ 331

>TCB1_RABIT (P06333) T-cell receptor beta chain ANA 11|
          Length = 319

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
 Frame = +2

Query: 38  YMIHPDSRTRAHTHSLGEAHLQT-----VHTHTARTHL 136
           Y++HP +    HTH+    H+       +HTHT  THL
Sbjct: 55  YLLHPHTHVCTHTHTCTHTHIHASTHVCIHTHTF-THL 91

>WRN_MOUSE (O09053) Werner syndrome ATP-dependent helicase homolog (EC 3.6.1.-)|
          Length = 1401

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +2

Query: 62   TRAHTHSLGEAHLQTVHTHTARTHLYRLVVHKASSSQGPRLSGITTVPARYSTPL 226
            T  H+ +   A L T  ++  RTH Y++    +S +  P+ S +   P   S+PL
Sbjct: 1052 TTQHSSNQNPAGLTTKQSNLERTHSYKVPEKVSSGTNIPKKSAVMPSPGTSSSPL 1106

>DERM_HUMAN (Q07507) Dermatopontin precursor (Tyrosine-rich acidic matrix|
           protein) (TRAMP)
          Length = 201

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +3

Query: 228 YTKPQSTVLRSSYTRTYAHENANTDRHHSSYNVP-PSAGGEVAQSWWQLLSSGAPRWQRL 404
           Y  PQ  V+ +   R+   +   +DR  +   +P P + GE  + WW+ ++     W + 
Sbjct: 48  YQCPQGQVIVA--VRSIFSKKEGSDRQWNYACMPTPQSLGEPTECWWEEINRAGMEWYQT 105

Query: 405 CS 410
           CS
Sbjct: 106 CS 107

>CRVP_OPHHA (Q7ZT98) Ophanin precursor (Opharin)|
          Length = 239

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +3

Query: 258 SSYTRTYAHENANTDRHHS-SYNVPPSAGGEVAQSWWQLLSSGAPRWQRLCS*GLHP 425
           S  TR    +    D H+S   +V P+A   +   W+   +S A RW   C+ G  P
Sbjct: 24  SESTRRQKKQKEIVDLHNSLRRSVSPTASNMLKMQWYPEAASNAERWASNCNLGHSP 80

>CRVP1_NAJAT (Q7T1K6) Natrin-1 precursor (Cysteine-rich venom protein 1)|
           (NA-CRVP1) (Protein G2a)
          Length = 239

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = +3

Query: 258 SSYTRTYAHENANTDRHHS-SYNVPPSAGGEVAQSWWQLLSSGAPRWQRLCS 410
           S  TR    +    D H+S    V P+A   +   W+   +S A RW   CS
Sbjct: 24  SESTRRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANTCS 75

>RF2_THEMA (Q9X1R5) Peptide chain release factor 2 (RF-2)|
          Length = 369

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 288 NANTDRHHSSYNVPPSAGGEVAQSWWQLLSSGAPRW 395
           N   D +++  +V P AGG  +Q W Q+L     RW
Sbjct: 119 NGKYDPNNAYLSVHPGAGGTESQDWAQMLLRMYMRW 154

>DERM_BOVIN (P19427) Dermatopontin (Tyrosine-rich acidic matrix protein)|
           (TRAMP) (22 kDa extracellular matrix protein) (Dermatan
           sulfate proteoglycan-associated protein 22K)
          Length = 183

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +3

Query: 270 RTYAHENANTDRHHSSYNVP-PSAGGEVAQSWWQLLSSGAPRWQRLCS 410
           R+  ++   +DR  +   +P P + GE  + WW+ ++     W + CS
Sbjct: 42  RSIFNKKEGSDRQWNYACMPTPQSLGEPTECWWEEINRAGMEWYQTCS 89

>QUEF_AQUAE (O67073) 7-cyano-7-deazaguanine reductase (EC 1.7.1.-)|
          Length = 129

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 109 YRLEMRFPERVCVCPCSG 56
           Y +E+ FPE  C+CP SG
Sbjct: 30  YMIEITFPEFTCLCPRSG 47

>VG_DROME (Q26366) Protein vestigial|
          Length = 453

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +2

Query: 56  SRTRAHTHSLGEAHLQT---VHTHTARTHLYRLVVHKASS 166
           S  R H HSL  AH       HTHT +T    L+V ++ +
Sbjct: 152 SSHRTHAHSLAHAHTHPHSHTHTHTHQTKEEDLIVPRSEA 191

>LAMC1_MOUSE (P02468) Laminin gamma-1 chain precursor (Laminin B2 chain)|
          Length = 1607

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 146 PNDRDVCVLCVCVPSGDALPRESVCVPVFG 57
           PN  D C  C C P G  + ++S C PV G
Sbjct: 873 PNPADKCKACACNPYG-TVQQQSSCNPVTG 901


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,766,374
Number of Sequences: 219361
Number of extensions: 1270142
Number of successful extensions: 3547
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3546
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)