ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast47f08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB021918.1| Bactrocera kandiensis G6pdh gene for glucose-6-phosphate dehydrogenase, partial cds Length = 1069 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 tttcattgactaaaagatgggaaa 91 ||||||||||| |||||||||||| Sbjct: 884 tttcattgacttaaagatgggaaa 861
>dbj|AB021917.1| Bactrocera carambolae G6pdh gene for glucose-6-phosphate dehydrogenase, partial cds Length = 1071 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 tttcattgactaaaagatgggaaa 91 ||||||||||| |||||||||||| Sbjct: 886 tttcattgacttaaagatgggaaa 863
>dbj|AB021910.1| Bactrocera dorsalis strain Ogasawara G6pdh gene for glucose-6-phosphate dehydrogenase, partial cds Length = 1069 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 tttcattgactaaaagatgggaaa 91 ||||||||||| |||||||||||| Sbjct: 884 tttcattgacttaaagatgggaaa 861
>dbj|AB021909.1| Bactrocera dorsalis strain Amami-oshima G6pdh gene for glucose-6-phosphate dehydrogenase, partial cds Length = 1069 Score = 40.1 bits (20), Expect = 1.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 tttcattgactaaaagatgggaaa 91 ||||||||||| |||||||||||| Sbjct: 884 tttcattgacttaaagatgggaaa 861
>gb|AC147382.3| Pan troglodytes BAC clone RP43-171M24 from 7, complete sequence Length = 198872 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 69 ttcattgactaaaagatgg 87 ||||||||||||||||||| Sbjct: 188304 ttcattgactaaaagatgg 188322
>gb|AC146098.3| Pan troglodytes BAC clone RP43-51J12 from 7, complete sequence Length = 195811 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 69 ttcattgactaaaagatgg 87 ||||||||||||||||||| Sbjct: 54339 ttcattgactaaaagatgg 54357
>gb|AC126455.4| Mus musculus BAC clone RP23-260P2 from chromosome 16, complete sequence Length = 197474 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ccctgacaatccatttcat 73 ||||||||||||||||||| Sbjct: 80737 ccctgacaatccatttcat 80719
>gb|AC096752.4| Homo sapiens BAC clone RP11-454E2 from 7, complete sequence Length = 131629 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 ttcattgactaaaagatgg 87 ||||||||||||||||||| Sbjct: 86012 ttcattgactaaaagatgg 85994
>emb|AL445588.12| Human DNA sequence from clone RP11-522H16 on chromosome 13, complete sequence Length = 174591 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 catttcattgactaaaaga 84 ||||||||||||||||||| Sbjct: 92203 catttcattgactaaaaga 92185
>emb|AL445684.8| Human DNA sequence from clone RP11-45D15 on chromosome 9 Contains a CpG island, complete sequence Length = 140091 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 ccctgacaatccatttcat 73 ||||||||||||||||||| Sbjct: 47346 ccctgacaatccatttcat 47364
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 ttcattgactaaaagatgg 87 ||||||||||||||||||| Sbjct: 19078 ttcattgactaaaagatgg 19060
>gb|AC009623.6|AC009623 Homo sapiens chromosome 8, clone RP11-219J21, complete sequence Length = 196953 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 tccatttcattgactaaaa 82 ||||||||||||||||||| Sbjct: 68268 tccatttcattgactaaaa 68250
>gb|AC019097.5| Homo sapiens BAC clone RP11-425I16 from 2, complete sequence Length = 186023 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 aaacaaaacataatcccat 19 ||||||||||||||||||| Sbjct: 112348 aaacaaaacataatcccat 112330 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,105,678 Number of Sequences: 3902068 Number of extensions: 1105678 Number of successful extensions: 80462 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80436 Number of HSP's gapped (non-prelim): 26 length of query: 115 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 94 effective length of database: 17,151,101,840 effective search space: 1612203572960 effective search space used: 1612203572960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
