ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast46h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ872272.1| Thermotoga sp. KOL6 16S rRNA gene, 23S rRNA gene... 44 0.32
2gb|AC158219.4| Mus musculus chromosome 8, clone RP23-189N10, com... 44 0.32
3gb|AC161433.5| Mus musculus chromosome 8, clone RP23-50F12, comp... 44 0.32
4gb|AY626560.1| Stomoxys calcitrans clone ScA11 microsatellite se... 42 1.3
5gb|AC147772.1| Homo sapiens chromosome 16 clone PCR-16A04, compl... 42 1.3
6gb|AC116324.6| Mus musculus BAC clone RP23-282P1 from 16, comple... 42 1.3
7gb|AC158235.3| Mus musculus BAC clone RP23-185P17 from chromosom... 42 1.3
8gb|AC182032.3| Spermophilus tridecemlineatus clone VMRC20-712F8,... 42 1.3
9gb|AC008837.6| Homo sapiens chromosome 5 clone CTD-2151A2, compl... 42 1.3
10gb|AC092333.2| Homo sapiens chromosome 5 clone RP11-195A20, comp... 42 1.3
11gb|AC012642.5| Homo sapiens chromosome 5 clone CTD-2287K1, compl... 42 1.3
12gb|AC007240.2| Homo sapiens BAC clone RP11-83M8 from 2, complete... 42 1.3
13gb|AC004066.1|AC004066 Homo sapiens chromosome 4 clone B353C18 m... 42 1.3
14dbj|AP002988.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.3
15gb|AC005668.1|AC005668 Homo sapiens chromosome 17, clone hRPK.24... 42 1.3
16gb|AC145916.3| Gallus gallus BAC clone CH261-82F15 from chromoso... 42 1.3
17emb|AL773600.4| Mouse DNA sequence from clone RP23-79B20 on chro... 42 1.3
18ref|XM_476044.1| Oryza sativa (japonica cultivar-group), predic... 40 5.0
19ref|XM_633498.1| Dictyostelium discoideum hypothetical protein (... 40 5.0
20gb|AC163281.3| Mus musculus BAC clone RP23-443B19 from chromosom... 40 5.0
21ref|XM_525964.1| PREDICTED: Pan troglodytes similar to Acetylcho... 40 5.0
22gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
23gb|AC103358.7| Mus musculus chromosome 19, clone RP24-358I11, co... 40 5.0
24gb|DQ486861.1| Tick-borne encephalitis virus strain EK-328 polyp... 40 5.0
25gb|AC122403.3| Mus musculus BAC clone RP24-112A10 from chromosom... 40 5.0
26gb|AC146244.3| Pan troglodytes BAC clone RP43-27M14 from 7, comp... 40 5.0
27gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosom... 40 5.0
28ref|XM_453930.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D19558g ... 40 5.0
29gb|AF130342.2| Homo sapiens chromosome 8, complete sequence 40 5.0
30gb|AC119968.9| Mus musculus chromosome 8, clone RP24-473C10, com... 40 5.0
31gb|AC137154.2| Mus musculus BAC clone RP24-572L22 from chromosom... 40 5.0
32gb|AC122396.4| Mus musculus BAC clone RP24-89O12 from chromosome... 40 5.0
33gb|AC126689.4| Mus musculus BAC clone RP23-166P10 from chromosom... 40 5.0
34gb|AC103610.9| Mus musculus chromosome 9, clone RP23-364M24, com... 40 5.0
35ref|XM_799198.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.0
36gb|AC127345.4| Mus musculus BAC clone RP23-217K23 from chromosom... 40 5.0
37gb|AC125528.4| Mus musculus BAC clone RP23-365I9 from chromosome... 40 5.0
38gb|AC011325.17| Homo sapiens 3 BAC RP11-17P4 (Roswell Park Cance... 40 5.0
39gb|AC025540.7| Homo sapiens BAC clone RP11-295N22 from 7, comple... 40 5.0
40gb|AC002463.1| Homo sapiens BAC clone CTA-302F4 from 7, complete... 40 5.0
41gb|DQ153877.1| Tick-borne encephalitis virus temperature-resista... 40 5.0
42emb|Z97987.1|HS453P22 Human DNA sequence from clone RP3-453P22 o... 40 5.0
43emb|AL360224.14| Human DNA sequence from clone RP11-471A8 on chr... 40 5.0
44emb|AL137024.27| Human DNA sequence from clone RP11-45A16 on chr... 40 5.0
45emb|AL138814.13| Human DNA sequence from clone RP11-10M21 on chr... 40 5.0
46emb|AL133215.17| Human DNA sequence from clone RP11-108L7 on chr... 40 5.0
47emb|AL078645.31|HSG115G20 Human DNA sequence from clone GS1-115G... 40 5.0
48gb|AC157907.2| Mus musculus chromosome 19, clone RP23-79H21, com... 40 5.0
49gb|AC114461.6| Rattus norvegicus 1 BAC CH230-14J24 (Children's H... 40 5.0
50emb|Y07863.1|LIVGEN Louping ill virus, complete genome 40 5.0
51emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 5.0
52gb|AC153511.4| Mus musculus 10 BAC RP23-102N12 (Roswell Park Can... 40 5.0
53emb|AL627426.19| Mouse DNA sequence from clone RP23-168D2 on chr... 40 5.0
54gb|AC008894.9| Homo sapiens chromosome 19 clone CTD-2231E14, com... 40 5.0
55gb|AC080023.6| Homo sapiens chromosome 11, clone RP11-351I24, co... 40 5.0
56gb|AC090338.6| Homo sapiens chromosome 18, clone RP11-704C2, com... 40 5.0
57gb|L40361.3| Tick-borne encephalitis virus polyprotein gene, com... 40 5.0
58dbj|AK157085.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 5.0
59gb|AC015617.8| Homo sapiens, clone RP11-45H23, complete sequence 40 5.0
60gb|S35365.1| nonstructural polyprotein [Langat virus LGT, strain... 40 5.0
61gb|AC135087.5| Mus musculus BAC clone RP23-270H16 from chromosom... 40 5.0
62dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
63gb|AC020911.9| Homo sapiens chromosome 19 clone CTD-2562J15, com... 40 5.0
64gb|AC092122.5| Homo sapiens chromosome 16 clone RP11-102F12, com... 40 5.0
65gb|AF289705.1|AF289705 Cynopterus sphinx microsatellite CSP-1 se... 40 5.0
66gb|AC010606.7| Homo sapiens chromosome 19 clone CTB-25J19, compl... 40 5.0
67gb|AC157277.2| Mus musculus BAC clone RP23-465H15 from chromosom... 40 5.0
68gb|AF253420.1|AF253420 Langat virus attenuated strain E5 polypro... 40 5.0
69gb|AF253419.1|AF253419 Langat virus strain TP21 polyprotein gene... 40 5.0
70emb|AL807802.22| Mouse DNA sequence from clone RP23-351B24 on ch... 40 5.0
71dbj|AK072845.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
72dbj|AK063535.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
73gb|AF069066.1|AF069066 Tick-borne encephalitis virus strain Vasi... 40 5.0
74gb|AC127263.4| Mus musculus BAC clone RP24-328P2 from 6, complet... 40 5.0
75gb|AC134838.4| Mus musculus BAC clone RP24-350C10 from 8, comple... 40 5.0
76emb|CT033503.1| Platynereis dumerilii EST IB0AAA19AH12EM1 40 5.0
77emb|CT033318.1| Platynereis dumerilii EST IB0AAA22CF02EM1 40 5.0
78emb|CT033317.1| Platynereis dumerilii EST IB0AAA22CF02FM1 40 5.0
79emb|CT032495.1| Platynereis dumerilii EST IB0AAA37BF03EM1 40 5.0
80emb|CT032494.1| Platynereis dumerilii EST IB0AAA37BF03FM1 40 5.0
81dbj|AB231868.1| Nematostella vectensis genes for zinc finger pro... 40 5.0
82gb|U39292.1|TEU39292 Tick-borne encephalitis virus Hypr polyprot... 40 5.0
83gb|AC166825.3| Mus musculus BAC clone RP23-368D12 from chromosom... 40 5.0
84gb|U27495.1|TEU27495 Tick-borne encephalitis virus Neudoerfl pol... 40 5.0
85gb|U27491.1|TEU27491 Tick-borne encephalitis virus 263 polyprote... 40 5.0
86gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
87gb|AC158638.15| Mus musculus 10 BAC RP24-117O6 (Roswell Park Can... 40 5.0
88gb|M86650.1|YFVNS15A Flavivirius langat NS1-NS5 genes 40 5.0
89gb|AC010330.7| Homo sapiens chromosome 19 clone CTD-2657C13, com... 40 5.0
90dbj|AB062064.1| Tick-borne encephalitis virus gene, complete cds... 40 5.0 
>emb|AJ872272.1| Thermotoga sp. KOL6 16S rRNA gene, 23S rRNA gene, 5S rRNA gene, ahcY
            gene (partial), topG gene, hppa gene, acp gene, ORF5,
            ORF6, priA gene, ORF8, ORF9, ORF10, ORF11, ORF12, mrsA
            gene, ORF14, rrp2 gene; fsr gene, ORF17, ORF18, ORF21,
            ORF22, ORF23, ORF24, gppA gene ORF26, ORF27, clpA gene,
            tRNA-Ala gene, tRNA-Arg gene, tRNA-His gene, tRNA-Arg
            gene, tRNA-Gly gene, IGS, ITS1 and ITS2, strain KOL6
          Length = 37534

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 68   accaaaaccagccccaaaagagcacaacca 97
            |||||||||||||||| ||||||| |||||
Sbjct: 4927 accaaaaccagccccagaagagcaaaacca 4898
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>gb|AC158219.4| Mus musculus chromosome 8, clone RP23-189N10, complete sequence
          Length = 215819

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 175   acatcactgtcatcatcatcac 196
             ||||||||||||||||||||||
Sbjct: 13805 acatcactgtcatcatcatcac 13826
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>gb|AC161433.5| Mus musculus chromosome 8, clone RP23-50F12, complete sequence
          Length = 253440

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 175    acatcactgtcatcatcatcac 196
              ||||||||||||||||||||||
Sbjct: 228639 acatcactgtcatcatcatcac 228660
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>gb|AY626560.1| Stomoxys calcitrans clone ScA11 microsatellite sequence
          Length = 460

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 178 tcactgtcatcatcatcacac 198
           |||||||||||||||||||||
Sbjct: 420 tcactgtcatcatcatcacac 400
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>gb|AC147772.1| Homo sapiens chromosome 16 clone PCR-16A04, complete sequence
          Length = 6214

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 176  catcactgtcatcatcatcac 196
            |||||||||||||||||||||
Sbjct: 3842 catcactgtcatcatcatcac 3862
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>gb|AC116324.6| Mus musculus BAC clone RP23-282P1 from 16, complete sequence
          Length = 200774

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 176   catcactgtcatcatcatcac 196
             |||||||||||||||||||||
Sbjct: 12536 catcactgtcatcatcatcac 12516
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>gb|AC158235.3| Mus musculus BAC clone RP23-185P17 from chromosome 16, complete sequence
          Length = 198822

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 176    catcactgtcatcatcatcac 196
              |||||||||||||||||||||
Sbjct: 191063 catcactgtcatcatcatcac 191043
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>gb|AC182032.3| Spermophilus tridecemlineatus clone VMRC20-712F8, complete sequence
          Length = 172253

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 332   gctaaggagagtgatagagat 352
             |||||||||||||||||||||
Sbjct: 82724 gctaaggagagtgatagagat 82744
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>gb|AC008837.6| Homo sapiens chromosome 5 clone CTD-2151A2, complete sequence
          Length = 108718

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 176    catcactgtcatcatcatcac 196
              |||||||||||||||||||||
Sbjct: 100466 catcactgtcatcatcatcac 100446
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>gb|AC092333.2| Homo sapiens chromosome 5 clone RP11-195A20, complete sequence
          Length = 157402

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 176   catcactgtcatcatcatcac 196
             |||||||||||||||||||||
Sbjct: 70107 catcactgtcatcatcatcac 70087
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>gb|AC012642.5| Homo sapiens chromosome 5 clone CTD-2287K1, complete sequence
          Length = 159956

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 176    catcactgtcatcatcatcac 196
              |||||||||||||||||||||
Sbjct: 136612 catcactgtcatcatcatcac 136632
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>gb|AC007240.2| Homo sapiens BAC clone RP11-83M8 from 2, complete sequence
          Length = 203250

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 176    catcactgtcatcatcatcac 196
              |||||||||||||||||||||
Sbjct: 180216 catcactgtcatcatcatcac 180236
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>gb|AC004066.1|AC004066 Homo sapiens chromosome 4 clone B353C18 map 4q25, complete sequence
          Length = 139877

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 175   acatcactgtcatcatcatca 195
             |||||||||||||||||||||
Sbjct: 13371 acatcactgtcatcatcatca 13391
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>dbj|AP002988.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-449K13, complete
             sequence
          Length = 105000

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 177   atcactgtcatcatcatcaca 197
             |||||||||||||||||||||
Sbjct: 64378 atcactgtcatcatcatcaca 64358
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>gb|AC005668.1|AC005668 Homo sapiens chromosome 17, clone hRPK.243_K_12, complete sequence
          Length = 152355

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 176   catcactgtcatcatcatcac 196
             |||||||||||||||||||||
Sbjct: 53121 catcactgtcatcatcatcac 53141



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 176   catcactgtcatcatcatcac 196
             |||||||||||||||||||||
Sbjct: 53076 catcactgtcatcatcatcac 53096



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   catcactgtcatcatcatca 195
             ||||||||||||||||||||
Sbjct: 53220 catcactgtcatcatcatca 53239



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   catcactgtcatcatcatca 195
             ||||||||||||||||||||
Sbjct: 53160 catcactgtcatcatcatca 53179



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   catcactgtcatcatcatca 195
             ||||||||||||||||||||
Sbjct: 53136 catcactgtcatcatcatca 53155



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   catcactgtcatcatcatca 195
             ||||||||||||||||||||
Sbjct: 53097 catcactgtcatcatcatca 53116
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>gb|AC145916.3| Gallus gallus BAC clone CH261-82F15 from chromosome unknown, complete
              sequence
          Length = 209299

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 175    acatcactgtcatcatcatca 195
              |||||||||||||||||||||
Sbjct: 167085 acatcactgtcatcatcatca 167105
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>emb|AL773600.4| Mouse DNA sequence from clone RP23-79B20 on chromosome 4, complete
              sequence
          Length = 198952

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 176    catcactgtcatcatcatcac 196
              |||||||||||||||||||||
Sbjct: 166138 catcactgtcatcatcatcac 166158
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>ref|XM_476044.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 894

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 catcactgtcatcatcatca 195
           ||||||||||||||||||||
Sbjct: 487 catcactgtcatcatcatca 468
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>ref|XM_633498.1| Dictyostelium discoideum hypothetical protein (DDB0185974), partial
           mRNA
          Length = 825

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 catcactgtcatcatcatca 195
           ||||||||||||||||||||
Sbjct: 583 catcactgtcatcatcatca 564
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>gb|AC163281.3| Mus musculus BAC clone RP23-443B19 from chromosome 8, complete sequence
          Length = 197609

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   tcatcatcatcacacatctt 203
             ||||||||||||||||||||
Sbjct: 87438 tcatcatcatcacacatctt 87457
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>ref|XM_525964.1| PREDICTED: Pan troglodytes similar to Acetylcholine receptor protein,
            alpha chain precursor (LOC470583), mRNA
          Length = 1839

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  catcactgtcatcatcatca 195
            ||||||||||||||||||||
Sbjct: 1635 catcactgtcatcatcatca 1654
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>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0035I01, complete sequence
          Length = 147813

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   catcactgtcatcatcatca 195
             ||||||||||||||||||||
Sbjct: 18770 catcactgtcatcatcatca 18789
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>gb|AC103358.7| Mus musculus chromosome 19, clone RP24-358I11, complete sequence
          Length = 117340

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 173   gcacatcactgtcatcatcatcac 196
             |||||| |||||||||||||||||
Sbjct: 39007 gcacatgactgtcatcatcatcac 38984
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>gb|DQ486861.1| Tick-borne encephalitis virus strain EK-328 polyprotein gene,
            complete cds
          Length = 10832

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  cactgtcatcatcatcacac 198
            ||||||||||||||||||||
Sbjct: 6039 cactgtcatcatcatcacac 6020
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>gb|AC122403.3| Mus musculus BAC clone RP24-112A10 from chromosome 16, complete
             sequence
          Length = 169481

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   catcactgtcatcatcatca 195
             ||||||||||||||||||||
Sbjct: 87887 catcactgtcatcatcatca 87868
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>gb|AC146244.3| Pan troglodytes BAC clone RP43-27M14 from 7, complete sequence
          Length = 161963

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    aaaacaacatcaatttgcaa 116
             ||||||||||||||||||||
Sbjct: 26123 aaaacaacatcaatttgcaa 26142
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>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence
          Length = 209986

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    catcactgtcatcatcatca 195
              ||||||||||||||||||||
Sbjct: 180547 catcactgtcatcatcatca 180566
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>ref|XM_453930.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D19558g predicted mRNA
          Length = 2223

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  catcactgtcatcatcatca 195
            ||||||||||||||||||||
Sbjct: 1360 catcactgtcatcatcatca 1341
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>gb|AF130342.2| Homo sapiens chromosome 8, complete sequence
          Length = 349992

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 344    gatagagatgtcgagctgggctgt 367
              |||||||||| |||||||||||||
Sbjct: 264750 gatagagatgacgagctgggctgt 264727
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>gb|AC119968.9| Mus musculus chromosome 8, clone RP24-473C10, complete sequence
          Length = 202850

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    catcactgtcatcatcatca 195
              ||||||||||||||||||||
Sbjct: 151086 catcactgtcatcatcatca 151105
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>gb|AC137154.2| Mus musculus BAC clone RP24-572L22 from chromosome 5, complete
            sequence
          Length = 173460

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  catcactgtcatcatcatca 195
            ||||||||||||||||||||
Sbjct: 2212 catcactgtcatcatcatca 2231
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>gb|AC122396.4| Mus musculus BAC clone RP24-89O12 from chromosome 5, complete sequence
          Length = 205737

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    catcactgtcatcatcatca 195
              ||||||||||||||||||||
Sbjct: 118657 catcactgtcatcatcatca 118638
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>gb|AC126689.4| Mus musculus BAC clone RP23-166P10 from chromosome 8, complete sequence
          Length = 206377

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    gtcgacactgaatgcctcac 54
             ||||||||||||||||||||
Sbjct: 92142 gtcgacactgaatgcctcac 92123
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>gb|AC103610.9| Mus musculus chromosome 9, clone RP23-364M24, complete sequence
          Length = 205900

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   acatcactgtcatcatcatc 194
             ||||||||||||||||||||
Sbjct: 75450 acatcactgtcatcatcatc 75431
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>ref|XM_799198.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506553.20) partial mRNA
          Length = 696

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 catcactgtcatcatcatca 195
           ||||||||||||||||||||
Sbjct: 685 catcactgtcatcatcatca 666
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>gb|AC127345.4| Mus musculus BAC clone RP23-217K23 from chromosome 5, complete
           sequence
          Length = 210748

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 176 catcactgtcatcatcatca 195
           ||||||||||||||||||||
Sbjct: 287 catcactgtcatcatcatca 306
to top
>gb|AC125528.4| Mus musculus BAC clone RP23-365I9 from chromosome 15, complete sequence
          Length = 197376

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   catcactgtcatcatcatca 195
             ||||||||||||||||||||
Sbjct: 26624 catcactgtcatcatcatca 26643
to top
>gb|AC011325.17| Homo sapiens 3 BAC RP11-17P4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 148095

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    catcactgtcatcatcatca 195
              ||||||||||||||||||||
Sbjct: 138841 catcactgtcatcatcatca 138860



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    catcactgtcatcatcatca 195
              ||||||||||||||||||||
Sbjct: 138609 catcactgtcatcatcatca 138628



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    catcactgtcatcatcatca 195
              ||||||||||||||||||||
Sbjct: 138111 catcactgtcatcatcatca 138130
to top
>gb|AC025540.7| Homo sapiens BAC clone RP11-295N22 from 7, complete sequence
          Length = 160896

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    catcactgtcatcatcatca 195
              ||||||||||||||||||||
Sbjct: 157160 catcactgtcatcatcatca 157141
to top
>gb|AC002463.1| Homo sapiens BAC clone CTA-302F4 from 7, complete sequence
          Length = 135684

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    aaaacaacatcaatttgcaa 116
             ||||||||||||||||||||
Sbjct: 23673 aaaacaacatcaatttgcaa 23654
to top
>gb|DQ153877.1| Tick-borne encephalitis virus temperature-resistant variant of strain
            263 polyprotein gene, complete cds
          Length = 10923

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  cactgtcatcatcatcacac 198
            ||||||||||||||||||||
Sbjct: 6055 cactgtcatcatcatcacac 6036
to top
>emb|Z97987.1|HS453P22 Human DNA sequence from clone RP3-453P22 on chromosome 1p36.2-36.3
              Contains two novel genes, complete sequence
          Length = 155176

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    atcactgtcatcatcatcac 196
              ||||||||||||||||||||
Sbjct: 152945 atcactgtcatcatcatcac 152926
to top
>emb|AL360224.14| Human DNA sequence from clone RP11-471A8 on chromosome Xq22.2-23
             Contains the 5' end of a novel gene (FLJ22679, FLJ36808)
             and a CpG island, complete sequence
          Length = 157162

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   atcactgtcatcatcatcac 196
             ||||||||||||||||||||
Sbjct: 46560 atcactgtcatcatcatcac 46579
to top
>emb|AL137024.27| Human DNA sequence from clone RP11-45A16 on chromosome 9q32-33.3
             Contains the 3' end of the PAPPA gene for
             pregnancy-associated plasma protein A, a novel gene and
             the 3'end of the ASTN2 gene for astrotactin 2, complete
             sequence
          Length = 159430

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   catcactgtcatcatcatca 195
             ||||||||||||||||||||
Sbjct: 97007 catcactgtcatcatcatca 96988
to top
>emb|AL138814.13| Human DNA sequence from clone RP11-10M21 on chromosome 13 Contains the
             5' end of a novel gene, complete sequence
          Length = 114290

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   catcactgtcatcatcatca 195
             ||||||||||||||||||||
Sbjct: 60142 catcactgtcatcatcatca 60123
to top
>emb|AL133215.17| Human DNA sequence from clone RP11-108L7 on chromosome 10 Contains the
             3' end of the C10orf6 gene for chromosome 10 open reading
             frame 6, the SEMA4G gene for sema domain immunoglobulin
             domain (Ig) transmembrane domain (TM) and short
             cytoplasmic domain (semaphorin) 4G, the MRPL43 gene for
             mitochondrial ribosomal protein L43, the C10orf2 gene for
             chromosome 10 open reading frame 2, the gene for a novel
             protein (KIAA1813) (LAPSER1), a novel gene, the gene for a
             novel protein (FLJ23209 FLJ00011), the gene for a novel
             tricarboxylate carrier domain containing protein (FLJ34185
             FLJ35692), the gene for a novel kazal-type serine protease
             inhibitor domain and immunoglobulin domain containing
             protein (FKSG28) (FKSG4), the 3' end of a novel gene and
             six CpG islands, complete sequence
          Length = 181086

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   tcactgtcatcatcatcaca 197
             ||||||||||||||||||||
Sbjct: 11694 tcactgtcatcatcatcaca 11675
to top
>emb|AL078645.31|HSG115G20 Human DNA sequence from clone GS1-115G20 on chromosome 1 Contains part of
              the C1orf21 gene for chromosome 1 open reading frame 21, a
              novel pseudogene and a novel transcript, complete sequence
          Length = 206089

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    catcactgtcatcatcatca 195
              ||||||||||||||||||||
Sbjct: 135905 catcactgtcatcatcatca 135886
to top
>gb|AC157907.2| Mus musculus chromosome 19, clone RP23-79H21, complete sequence
          Length = 153518

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 173   gcacatcactgtcatcatcatcac 196
             |||||| |||||||||||||||||
Sbjct: 44539 gcacatgactgtcatcatcatcac 44562
to top
>gb|AC114461.6| Rattus norvegicus 1 BAC CH230-14J24 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 238852

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    catcactgtcatcatcatca 195
              ||||||||||||||||||||
Sbjct: 206825 catcactgtcatcatcatca 206806
to top
>emb|Y07863.1|LIVGEN Louping ill virus, complete genome
          Length = 10871

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  cactgtcatcatcatcacac 198
            ||||||||||||||||||||
Sbjct: 6052 cactgtcatcatcatcacac 6033
to top
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 1715506

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 176     catcactgtcatcatcatca 195
               ||||||||||||||||||||
Sbjct: 1649308 catcactgtcatcatcatca 1649289
to top
>gb|AC153511.4| Mus musculus 10 BAC RP23-102N12 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 196715

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   catcactgtcatcatcatca 195
             ||||||||||||||||||||
Sbjct: 90266 catcactgtcatcatcatca 90247
to top
>emb|AL627426.19| Mouse DNA sequence from clone RP23-168D2 on chromosome 11 Contains the
             5' end of a novel gene, complete sequence
          Length = 96727

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ttcttctggtgccttccatg 272
             ||||||||||||||||||||
Sbjct: 47223 ttcttctggtgccttccatg 47242
to top
>gb|AC008894.9| Homo sapiens chromosome 19 clone CTD-2231E14, complete sequence
          Length = 112067

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   catcactgtcatcatcatca 195
             ||||||||||||||||||||
Sbjct: 96565 catcactgtcatcatcatca 96584
to top
>gb|AC080023.6| Homo sapiens chromosome 11, clone RP11-351I24, complete sequence
          Length = 189886

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    catcactgtcatcatcatca 195
              ||||||||||||||||||||
Sbjct: 145382 catcactgtcatcatcatca 145401
to top
>gb|AC090338.6| Homo sapiens chromosome 18, clone RP11-704C2, complete sequence
          Length = 200525

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    catcactgtcatcatcatca 195
              ||||||||||||||||||||
Sbjct: 134741 catcactgtcatcatcatca 134760
to top
>gb|L40361.3| Tick-borne encephalitis virus polyprotein gene, complete cds
          Length = 10927

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  cactgtcatcatcatcacac 198
            ||||||||||||||||||||
Sbjct: 6055 cactgtcatcatcatcacac 6036
to top
>dbj|AK157085.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830201A08 product:unclassifiable, full
           insert sequence
          Length = 570

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 catcactgtcatcatcatca 195
           ||||||||||||||||||||
Sbjct: 37  catcactgtcatcatcatca 18
to top
>gb|AC015617.8| Homo sapiens, clone RP11-45H23, complete sequence
          Length = 160541

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    catcactgtcatcatcatca 195
              ||||||||||||||||||||
Sbjct: 110673 catcactgtcatcatcatca 110654
to top
>gb|S35365.1| nonstructural polyprotein [Langat virus LGT, strain TP21, Genomic
            RNA, 7917 nt]
          Length = 7917

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  cactgtcatcatcatcacac 198
            ||||||||||||||||||||
Sbjct: 3595 cactgtcatcatcatcacac 3576
to top
>gb|AC135087.5| Mus musculus BAC clone RP23-270H16 from chromosome 1, complete sequence
          Length = 172385

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    cacaaccaaaacaacatcaa 109
             ||||||||||||||||||||
Sbjct: 62047 cacaaccaaaacaacatcaa 62066
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 176      catcactgtcatcatcatca 195
                ||||||||||||||||||||
Sbjct: 29534268 catcactgtcatcatcatca 29534287
to top
>gb|AC020911.9| Homo sapiens chromosome 19 clone CTD-2562J15, complete sequence
          Length = 196512

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   catcactgtcatcatcatca 195
             ||||||||||||||||||||
Sbjct: 17258 catcactgtcatcatcatca 17277
to top
>gb|AC092122.5| Homo sapiens chromosome 16 clone RP11-102F12, complete sequence
          Length = 174809

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 177    atcactgtcatcatcatcac 196
              ||||||||||||||||||||
Sbjct: 142027 atcactgtcatcatcatcac 142046
to top
>gb|AF289705.1|AF289705 Cynopterus sphinx microsatellite CSP-1 sequence
          Length = 428

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 176 catcactgtcatcatcatca 195
           ||||||||||||||||||||
Sbjct: 154 catcactgtcatcatcatca 173
to top
>gb|AC010606.7| Homo sapiens chromosome 19 clone CTB-25J19, complete sequence
          Length = 105940

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   catcactgtcatcatcatca 195
             ||||||||||||||||||||
Sbjct: 17684 catcactgtcatcatcatca 17703
to top
>gb|AC157277.2| Mus musculus BAC clone RP23-465H15 from chromosome 15, complete sequence
          Length = 177253

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    catcactgtcatcatcatca 195
              ||||||||||||||||||||
Sbjct: 115541 catcactgtcatcatcatca 115560
to top
>gb|AF253420.1|AF253420 Langat virus attenuated strain E5 polyprotein gene, complete cds
          Length = 10943

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  cactgtcatcatcatcacac 198
            ||||||||||||||||||||
Sbjct: 6053 cactgtcatcatcatcacac 6034
to top
>gb|AF253419.1|AF253419 Langat virus strain TP21 polyprotein gene, complete cds
          Length = 10943

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  cactgtcatcatcatcacac 198
            ||||||||||||||||||||
Sbjct: 6053 cactgtcatcatcatcacac 6034
to top
>emb|AL807802.22| Mouse DNA sequence from clone RP23-351B24 on chromosome 4, complete
              sequence
          Length = 186857

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    catcactgtcatcatcatca 195
              ||||||||||||||||||||
Sbjct: 151711 catcactgtcatcatcatca 151692
to top
>dbj|AK072845.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142J09, full
           insert sequence
          Length = 1284

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 catcactgtcatcatcatca 195
           ||||||||||||||||||||
Sbjct: 571 catcactgtcatcatcatca 552
to top
>dbj|AK063535.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B10, full
           insert sequence
          Length = 1161

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 catcactgtcatcatcatca 195
           ||||||||||||||||||||
Sbjct: 572 catcactgtcatcatcatca 553
to top
>gb|AF069066.1|AF069066 Tick-borne encephalitis virus strain Vasilchenko, complete genome
          Length = 10927

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  cactgtcatcatcatcacac 198
            ||||||||||||||||||||
Sbjct: 6055 cactgtcatcatcatcacac 6036
to top
>gb|AC127263.4| Mus musculus BAC clone RP24-328P2 from 6, complete sequence
          Length = 149105

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    catcactgtcatcatcatca 195
              ||||||||||||||||||||
Sbjct: 130689 catcactgtcatcatcatca 130670
to top
>gb|AC134838.4| Mus musculus BAC clone RP24-350C10 from 8, complete sequence
          Length = 177716

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   tcatcatcatcacacatctt 203
             ||||||||||||||||||||
Sbjct: 10686 tcatcatcatcacacatctt 10667
to top
>emb|CT033503.1| Platynereis dumerilii EST IB0AAA19AH12EM1
          Length = 813

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 catcactgtcatcatcatca 195
           ||||||||||||||||||||
Sbjct: 160 catcactgtcatcatcatca 141
to top
>emb|CT033318.1| Platynereis dumerilii EST IB0AAA22CF02EM1
          Length = 798

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 catcactgtcatcatcatca 195
           ||||||||||||||||||||
Sbjct: 153 catcactgtcatcatcatca 134
to top
>emb|CT033317.1| Platynereis dumerilii EST IB0AAA22CF02FM1
          Length = 782

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 176 catcactgtcatcatcatca 195
           ||||||||||||||||||||
Sbjct: 646 catcactgtcatcatcatca 665
to top
>emb|CT032495.1| Platynereis dumerilii EST IB0AAA37BF03EM1
          Length = 814

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 catcactgtcatcatcatca 195
           ||||||||||||||||||||
Sbjct: 157 catcactgtcatcatcatca 138
to top
>emb|CT032494.1| Platynereis dumerilii EST IB0AAA37BF03FM1
          Length = 804

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 176 catcactgtcatcatcatca 195
           ||||||||||||||||||||
Sbjct: 658 catcactgtcatcatcatca 677
to top
>dbj|AB231868.1| Nematostella vectensis genes for zinc finger proteins Nv-ZicB, Nv-ZicC,
              Nv-ZicD, Nv-ZicE, complete cds
          Length = 177971

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    catcactgtcatcatcatca 195
              ||||||||||||||||||||
Sbjct: 111862 catcactgtcatcatcatca 111843
to top
>gb|U39292.1|TEU39292 Tick-borne encephalitis virus Hypr polyprotein gene, complete cds
          Length = 10835

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  cactgtcatcatcatcacac 198
            ||||||||||||||||||||
Sbjct: 6055 cactgtcatcatcatcacac 6036
to top
>gb|AC166825.3| Mus musculus BAC clone RP23-368D12 from chromosome 6, complete sequence
          Length = 182232

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    catcactgtcatcatcatca 195
              ||||||||||||||||||||
Sbjct: 114340 catcactgtcatcatcatca 114359
to top
>gb|U27495.1|TEU27495 Tick-borne encephalitis virus Neudoerfl polyprotein, complete cds
          Length = 11141

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  cactgtcatcatcatcacac 198
            ||||||||||||||||||||
Sbjct: 6055 cactgtcatcatcatcacac 6036
to top
>gb|U27491.1|TEU27491 Tick-borne encephalitis virus 263 polyprotein, complete cds
          Length = 11141

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  cactgtcatcatcatcacac 198
            ||||||||||||||||||||
Sbjct: 6055 cactgtcatcatcatcacac 6036
to top
>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17,
              complete sequence
          Length = 134631

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    catcactgtcatcatcatca 195
              ||||||||||||||||||||
Sbjct: 118538 catcactgtcatcatcatca 118557
to top
>gb|AC158638.15| Mus musculus 10 BAC RP24-117O6 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 185145

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    catcactgtcatcatcatca 195
              ||||||||||||||||||||
Sbjct: 177482 catcactgtcatcatcatca 177463
to top
>gb|M86650.1|YFVNS15A Flavivirius langat NS1-NS5 genes
          Length = 7917

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  cactgtcatcatcatcacac 198
            ||||||||||||||||||||
Sbjct: 3595 cactgtcatcatcatcacac 3576
to top
>gb|AC010330.7| Homo sapiens chromosome 19 clone CTD-2657C13, complete sequence
          Length = 80240

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   catcactgtcatcatcatca 195
             ||||||||||||||||||||
Sbjct: 27885 catcactgtcatcatcatca 27904
to top
>dbj|AB062064.1| Tick-borne encephalitis virus gene, complete cds, strain:Sofjin-HO
          Length = 10894

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  cactgtcatcatcatcacac 198
            ||||||||||||||||||||
Sbjct: 6054 cactgtcatcatcatcacac 6035


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,450,497
Number of Sequences: 3902068
Number of extensions: 3450497
Number of successful extensions: 69358
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69144
Number of HSP's gapped (non-prelim): 214
length of query: 372
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 350
effective length of database: 17,147,199,772
effective search space: 6001519920200
effective search space used: 6001519920200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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