ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast46e12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC092126.3| Homo sapiens chromosome 16 clone RP11-1114G22, co... 44 0.33
2gb|AC009085.5|AC009085 Homo sapiens chromosome 16 clone RP11-368... 44 0.33
3gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genom... 42 1.3
4gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 geno... 42 1.3
5gb|AC148920.1| Mus musculus BAC clone RP23-273O10 from chromosom... 42 1.3
6gb|AC162443.3| Mus musculus chromosome 7, clone RP23-457F4, comp... 42 1.3
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.3
8emb|BX897727.17| Zebrafish DNA sequence from clone DKEY-90A13 in... 42 1.3
9emb|CR354596.12| Zebrafish DNA sequence from clone CH211-117K14 ... 42 1.3
10gb|AC153131.5| Mus musculus BAC clone RP24-356O12 from chromosom... 42 1.3
11gb|AC011353.5| Homo sapiens chromosome 5 clone CTC-328A6, comple... 42 1.3
12gb|AC012047.8| Homo sapiens chromosome 10 clone RP11-423F10, com... 42 1.3
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
14emb|AL807769.8| Zebrafish DNA sequence from clone CH211-197G8, c... 42 1.3
15gb|AY536479.1| Philotrypesis sp. EJ-23 cytochrome b (cytb) gene,... 40 5.1
16gb|AY536478.1| Philotrypesis sp. EJ-11 cytochrome b-like (cytb) ... 40 5.1
17gb|AC145321.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
18gb|AC109291.12| Mus musculus chromosome 18, clone RP24-231C23, c... 40 5.1
19gb|AC141425.3| Mus musculus BAC clone RP23-283P2 from chromosome... 40 5.1
20gb|AY894233.1| Tringa nebularia cytochrome b (cytb) gene, partia... 40 5.1
21emb|AL356502.21| Human DNA sequence from clone RP11-430I3 on chr... 40 5.1
22gb|AC123518.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
23gb|AC159967.2| Mus musculus chromosome 1, clone RP23-302P9, comp... 40 5.1
24emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 5.1
25gb|AC091606.8| Mus Musculus Strain C57BL6/J chromosome X BAC, RP... 40 5.1
26emb|CR361547.8| Zebrafish DNA sequence from clone CH211-22K7 in ... 40 5.1
27gb|AC122142.1| Caenorhabditis briggsae cosmid CB019M24, complete... 40 5.1
28gb|AC007134.10| Arabidopsis thaliana chromosome 2 clone F7H1 map... 40 5.1
29dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
30dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
31dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
32gb|AC125491.1| Homo sapiens 12 BAC RP11-235E24 (Roswell Park Can... 40 5.1
33dbj|AP006856.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
34dbj|AP003567.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
35emb|AL732294.18| Mouse DNA sequence from clone RP23-59N7 on chro... 40 5.1
36dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
37dbj|AP004344.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
38emb|BX511240.5| Zebrafish DNA sequence from clone CH211-113H10, ... 40 5.1
39emb|BX649328.6| Zebrafish DNA sequence from clone DKEY-72L17 in ... 40 5.1
40dbj|BS000238.1| Pan troglodytes chromosome 22 clone:PTB-016O01, ... 40 5.1
41dbj|BS000237.1| Pan troglodytes chromosome 22 clone:PTB-044B23, ... 40 5.1
42dbj|AB009048.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 5.1
43gb|AC103387.11| Mus musculus chromosome 3, clone RP24-383D8, com... 40 5.1
44dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 5.1
45emb|CR354403.16| Zebrafish DNA sequence from clone CH211-196E8 i... 40 5.1
46gb|AC102630.6| Mus musculus chromosome 1, clone RP23-473M13, com... 40 5.1
47gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
48gb|AC148020.3| Mus musculus BAC clone RP23-6A22 from 18, complet... 40 5.1
49emb|CR749776.6| Zebrafish DNA sequence from clone CH211-206L17 i... 40 5.1
50gb|AC155172.4| Mus musculus BAC clone RP23-36N9 from chromosome ... 40 5.1
51dbj|AB021920.1| Human endogenous retrovirus W gene, clone HWX3, ... 40 5.1
52dbj|AP001051.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 5.1 
>gb|AC092126.3| Homo sapiens chromosome 16 clone RP11-1114G22, complete sequence
          Length = 148883

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 335   tttaatgatttcctggctggat 356
             ||||||||||||||||||||||
Sbjct: 15166 tttaatgatttcctggctggat 15145
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>gb|AC009085.5|AC009085 Homo sapiens chromosome 16 clone RP11-368L12, complete sequence
          Length = 155860

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 335   tttaatgatttcctggctggat 356
             ||||||||||||||||||||||
Sbjct: 88658 tttaatgatttcctggctggat 88637
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>gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genomic sequence, complete
             sequence
          Length = 112892

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                      
Query: 325   agctctgttgtttaatgatttcctggctggatgatcctgtttcatgtacaaatttga 381
             ||||||||||||||||||  ||||   | |||| |||| ||||||||||||| ||||
Sbjct: 78992 agctctgttgtttaatgacatcctcaattgatggtcctttttcatgtacaaagttga 78936
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>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence,
           complete sequence
          Length = 163712

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 325 agctctgttgtttaatgatttcctggctggatgatcctgtttcatgtacaaatttga 381
           ||||||||||||||||||  ||||   | |||| |||| ||||||||||||| ||||
Sbjct: 908 agctctgttgtttaatgacatcctcaattgatggtcctttttcatgtacaaagttga 852
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>gb|AC148920.1| Mus musculus BAC clone RP23-273O10 from chromosome 19, complete sequence
          Length = 224526

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 97     cactaaaactgaaagaaaaaa 117
              |||||||||||||||||||||
Sbjct: 191860 cactaaaactgaaagaaaaaa 191840
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>gb|AC162443.3| Mus musculus chromosome 7, clone RP23-457F4, complete sequence
          Length = 176520

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    atacaaaatttgaaagggaca 91
             |||||||||||||||||||||
Sbjct: 94167 atacaaaatttgaaagggaca 94187



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    atacaaaatttgaaagggaca 91
             |||||||||||||||||||||
Sbjct: 39831 atacaaaatttgaaagggaca 39851
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                         
Query: 325      agctctgttgtttaatgatttcctggctggatgatcctgtttcatgtacaaatttga 381
                ||||||||||||||||||  ||||   | |||| |||| ||||||||||||| ||||
Sbjct: 29770469 agctctgttgtttaatgacatcctcaattgatggtcctttttcatgtacaaagttga 29770525
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>emb|BX897727.17| Zebrafish DNA sequence from clone DKEY-90A13 in linkage group 23,
             complete sequence
          Length = 236277

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 309   ttttgcaaagttgaaaagctc 329
             |||||||||||||||||||||
Sbjct: 82085 ttttgcaaagttgaaaagctc 82065
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>emb|CR354596.12| Zebrafish DNA sequence from clone CH211-117K14 in linkage group 23,
              complete sequence
          Length = 172749

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 47     gaaaagaggtgaaatctacac 67
              |||||||||||||||||||||
Sbjct: 114113 gaaaagaggtgaaatctacac 114133
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>gb|AC153131.5| Mus musculus BAC clone RP24-356O12 from chromosome 19, complete
             sequence
          Length = 184864

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 97    cactaaaactgaaagaaaaaa 117
             |||||||||||||||||||||
Sbjct: 85359 cactaaaactgaaagaaaaaa 85339
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>gb|AC011353.5| Homo sapiens chromosome 5 clone CTC-328A6, complete sequence
          Length = 143527

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 222   ccagtatggagaagaggagtt 242
             |||||||||||||||||||||
Sbjct: 13936 ccagtatggagaagaggagtt 13916
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>gb|AC012047.8| Homo sapiens chromosome 10 clone RP11-423F10, complete sequence
          Length = 188645

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 100   taaaactgaaagaaaaaaggg 120
             |||||||||||||||||||||
Sbjct: 48548 taaaactgaaagaaaaaaggg 48568
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                         
Query: 325      agctctgttgtttaatgatttcctggctggatgatcctgtttcatgtacaaatttga 381
                ||||||||||||||||||  ||||   | |||| |||| ||||||||||||| ||||
Sbjct: 29861891 agctctgttgtttaatgacatcctcaattgatggtcctttttcatgtacaaagttga 29861947
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>emb|AL807769.8| Zebrafish DNA sequence from clone CH211-197G8, complete sequence
          Length = 188344

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 309   ttttgcaaagttgaaaagctc 329
             |||||||||||||||||||||
Sbjct: 43311 ttttgcaaagttgaaaagctc 43291
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>gb|AY536479.1| Philotrypesis sp. EJ-23 cytochrome b (cytb) gene, partial cds;
           mitochondrial
          Length = 462

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 354 gatgatcctgtttcatgtacaaat 377
           ||||||||||||||||||| ||||
Sbjct: 214 gatgatcctgtttcatgtagaaat 191
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>gb|AY536478.1| Philotrypesis sp. EJ-11 cytochrome b-like (cytb) gene, partial
           sequence; mitochondrial
          Length = 458

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 354 gatgatcctgtttcatgtacaaat 377
           ||||||||||||||||||| ||||
Sbjct: 213 gatgatcctgtttcatgtaaaaat 190
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>gb|AC145321.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0094P07, complete sequence
          Length = 162311

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 116   aagggtaaacttgtctttgtttgg 139
             |||||||||||||||||| |||||
Sbjct: 68697 aagggtaaacttgtctttatttgg 68720
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>gb|AC109291.12| Mus musculus chromosome 18, clone RP24-231C23, complete sequence
          Length = 191711

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   ggatgatcctgtttcatgta 372
             ||||||||||||||||||||
Sbjct: 51041 ggatgatcctgtttcatgta 51060
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>gb|AC141425.3| Mus musculus BAC clone RP23-283P2 from chromosome 14, complete
            sequence
          Length = 174986

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 101  aaaactgaaagaaaaaaggg 120
            ||||||||||||||||||||
Sbjct: 3430 aaaactgaaagaaaaaaggg 3449
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>gb|AY894233.1| Tringa nebularia cytochrome b (cytb) gene, partial cds;
           mitochondrial
          Length = 870

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 226 tatggagaagaggagttatgaata 249
           |||||||||||||||||| |||||
Sbjct: 745 tatggagaagaggagttaggaata 722
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>emb|AL356502.21| Human DNA sequence from clone RP11-430I3 on chromosome 13 Contains the
             5' end of the DIAPH3 gene for diaphanous homolog 3
             (Drosophila), a novel gene and a CpG island, complete
             sequence
          Length = 63441

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    ctaaaactgaaagaaaaaag 118
             ||||||||||||||||||||
Sbjct: 46359 ctaaaactgaaagaaaaaag 46340
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>gb|AC123518.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0088N01,
              complete sequence
          Length = 123954

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 116    aagggtaaacttgtctttgtttgg 139
              |||||||||||||||||| |||||
Sbjct: 121513 aagggtaaacttgtctttatttgg 121536
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>gb|AC159967.2| Mus musculus chromosome 1, clone RP23-302P9, complete sequence
          Length = 185146

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   tcccagtatggagaagagga 239
             ||||||||||||||||||||
Sbjct: 25295 tcccagtatggagaagagga 25276
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>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 2602197

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    gaaagaaaaaagggtaaact 126
              ||||||||||||||||||||
Sbjct: 901925 gaaagaaaaaagggtaaact 901944
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>gb|AC091606.8| Mus Musculus Strain C57BL6/J chromosome X BAC, RP23-75P20, complete
             sequence
          Length = 234105

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 356   tgatcctgtttcatgtacaaattt 379
             |||| |||||||||||||||||||
Sbjct: 69503 tgattctgtttcatgtacaaattt 69480
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>emb|CR361547.8| Zebrafish DNA sequence from clone CH211-22K7 in linkage group 4 Contains
              three novel genes and six CpG islands, complete sequence
          Length = 168908

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    taaaactgaaagaaaaaagg 119
              ||||||||||||||||||||
Sbjct: 157262 taaaactgaaagaaaaaagg 157281
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>gb|AC122142.1| Caenorhabditis briggsae cosmid CB019M24, complete sequence
          Length = 111147

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   aaaactgaaagaaaaaaggg 120
             ||||||||||||||||||||
Sbjct: 85527 aaaactgaaagaaaaaaggg 85546
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>gb|AC007134.10| Arabidopsis thaliana chromosome 2 clone F7H1 map mi398, complete
             sequence
          Length = 84544

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 316   aagttgaaaagctctgttgtttaatgat 343
             |||||| ||| |||||||||||||||||
Sbjct: 33876 aagttgtaaaactctgttgtttaatgat 33849
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 116     aagggtaaacttgtctttgtttgg 139
               |||||||||||||||||| |||||
Sbjct: 5228702 aagggtaaacttgtctttatttgg 5228679
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 106     tgaaagaaaaaagggtaaac 125
               ||||||||||||||||||||
Sbjct: 8264546 tgaaagaaaaaagggtaaac 8264565
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 106      tgaaagaaaaaagggtaaacttgtcttt 133
                ||||| ||||||||||||| ||||||||
Sbjct: 11463307 tgaaataaaaaagggtaaatttgtcttt 11463280
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>gb|AC125491.1| Homo sapiens 12 BAC RP11-235E24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 111264

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    actaaaactgaaagaaaaaa 117
             ||||||||||||||||||||
Sbjct: 45714 actaaaactgaaagaaaaaa 45733
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>dbj|AP006856.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
            fosmid clone:OSJNOa173H09
          Length = 39054

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 106  tgaaagaaaaaagggtaaacttgtcttt 133
            ||||| ||||||||||||| ||||||||
Sbjct: 9468 tgaaataaaaaagggtaaatttgtcttt 9441
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>dbj|AP003567.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBb0022N24
          Length = 124062

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 106    tgaaagaaaaaagggtaaacttgtcttt 133
              ||||| ||||||||||||| ||||||||
Sbjct: 100505 tgaaataaaaaagggtaaatttgtcttt 100478
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>emb|AL732294.18| Mouse DNA sequence from clone RP23-59N7 on chromosome X, complete
             sequence
          Length = 112893

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 356   tgatcctgtttcatgtacaaattt 379
             |||| |||||||||||||||||||
Sbjct: 75406 tgattctgtttcatgtacaaattt 75383
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>dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0003K21
          Length = 158810

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    tgaaagaaaaaagggtaaac 125
              ||||||||||||||||||||
Sbjct: 147569 tgaaagaaaaaagggtaaac 147588
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>dbj|AP004344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0639B07
          Length = 138780

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   tgaaagaaaaaagggtaaac 125
             ||||||||||||||||||||
Sbjct: 59658 tgaaagaaaaaagggtaaac 59677
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>emb|BX511240.5| Zebrafish DNA sequence from clone CH211-113H10, complete sequence
          Length = 175187

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 232    gaagaggagttatgaataca 251
              ||||||||||||||||||||
Sbjct: 105556 gaagaggagttatgaataca 105537
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>emb|BX649328.6| Zebrafish DNA sequence from clone DKEY-72L17 in linkage group 20,
              complete sequence
          Length = 224173

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    taaaactgaaagaaaaaagg 119
              ||||||||||||||||||||
Sbjct: 172382 taaaactgaaagaaaaaagg 172401
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>dbj|BS000238.1| Pan troglodytes chromosome 22 clone:PTB-016O01, map 22, complete
             sequences
          Length = 168017

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 104   actgaaagaaaaaagggtaaactt 127
             ||||||||||| ||||||||||||
Sbjct: 50324 actgaaagaaacaagggtaaactt 50347
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>dbj|BS000237.1| Pan troglodytes chromosome 22 clone:PTB-044B23, map 22, complete
              sequences
          Length = 144611

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 104    actgaaagaaaaaagggtaaactt 127
              ||||||||||| ||||||||||||
Sbjct: 118227 actgaaagaaacaagggtaaactt 118250
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>dbj|AB009048.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15E6
          Length = 71736

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 316   aagttgaaaagctctgttgtttaatgat 343
             |||||| ||| |||||||||||||||||
Sbjct: 44216 aagttgtaaaactctgttgtttaatgat 44189
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>gb|AC103387.11| Mus musculus chromosome 3, clone RP24-383D8, complete sequence
          Length = 157053

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   ctctgttgtttaatgatttc 346
             ||||||||||||||||||||
Sbjct: 42082 ctctgttgtttaatgatttc 42063
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>dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, section 95/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 104    actgaaagaaaaaagggtaaactt 127
              ||||||||||| ||||||||||||
Sbjct: 327161 actgaaagaaacaagggtaaactt 327184
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>emb|CR354403.16| Zebrafish DNA sequence from clone CH211-196E8 in linkage group 9,
              complete sequence
          Length = 167419

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 220    tcccagtatggagaagagga 239
              ||||||||||||||||||||
Sbjct: 142897 tcccagtatggagaagagga 142878
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>gb|AC102630.6| Mus musculus chromosome 1, clone RP23-473M13, complete sequence
          Length = 196529

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   tcccagtatggagaagagga 239
             ||||||||||||||||||||
Sbjct: 35753 tcccagtatggagaagagga 35772
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 116     aagggtaaacttgtctttgtttgg 139
               |||||||||||||||||| |||||
Sbjct: 5295179 aagggtaaacttgtctttatttgg 5295156
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>gb|AC148020.3| Mus musculus BAC clone RP23-6A22 from 18, complete sequence
          Length = 238892

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 353   ggatgatcctgtttcatgta 372
             ||||||||||||||||||||
Sbjct: 72826 ggatgatcctgtttcatgta 72807
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>emb|CR749776.6| Zebrafish DNA sequence from clone CH211-206L17 in linkage group 9,
              complete sequence
          Length = 154131

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    tcccagtatggagaagagga 239
              ||||||||||||||||||||
Sbjct: 133481 tcccagtatggagaagagga 133500
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>gb|AC155172.4| Mus musculus BAC clone RP23-36N9 from chromosome 14, complete sequence
          Length = 255753

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    aaaactgaaagaaaaaaggg 120
              ||||||||||||||||||||
Sbjct: 153166 aaaactgaaagaaaaaaggg 153147
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>dbj|AB021920.1| Human endogenous retrovirus W gene, clone HWX3, similar to MSRV
           polyprotein sequence
          Length = 434

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 97  cactaaaactgaaagaaaaaagggtaaa 124
           ||||||||||  ||||||||||||||||
Sbjct: 311 cactaaaactagaagaaaaaagggtaaa 338
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>dbj|AP001051.1| Homo sapiens genomic DNA, chromosome 21, clone:KB161B12, MX1-D21S171
             region, complete sequence
          Length = 84904

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 104   actgaaagaaaaaagggtaaactt 127
             ||||||||||| ||||||||||||
Sbjct: 33435 actgaaagaaacaagggtaaactt 33458


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,726,866
Number of Sequences: 3902068
Number of extensions: 4726866
Number of successful extensions: 97317
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 97063
Number of HSP's gapped (non-prelim): 254
length of query: 381
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 359
effective length of database: 17,147,199,772
effective search space: 6155844718148
effective search space used: 6155844718148
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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