ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast46d10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB032840.1| Hordeum vulgare HVA/68 mRNA for vacuolar proton-ATPase, complete cds Length = 2281 Score = 747 bits (377), Expect = 0.0 Identities = 397/406 (97%) Strand = Plus / Minus Query: 1 aatgtaaaatcctgaaaaaacaaggctgtctgtctgtcgcnnnnnnnggggatcctgaaa 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2100 aatgtaaaatcctgaaaaaacaaggctgtctgtctgtcgcaaaaaaaggggatcctgaaa 2041 Query: 61 cgtaattcgcatctacacaaactctggtgaagcagaagcaaattgctcgcaagtcgttca 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2040 cgtaattcgcatctacacaaactctggtgaagcaaaagcaaattgctcgcaagtcgttca 1981 Query: 121 cagcatttggtgctccttattgtttacacggtggccatacacaacgtttcttctttcttt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1980 cagcatttggtgctccttattgtttacacggtggccatacacaacgtttcttctttcttt 1921 Query: 181 tacctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1920 tacctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctgg 1861 Query: 241 aatttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaagg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1860 aatttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaagg 1801 Query: 301 cggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1800 cggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatca 1741 Query: 361 gcattagctgctcgctccacagcctgattcgctaattgattgaaat 406 ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1740 gcattggctgctcgctccacagcctgattcgctaattgattgaaat 1695
>gb|U36939.1|HVU36939 Hordeum vulgare vacuolar ATPase catalytic subunit mRNA, partial cds Length = 2089 Score = 731 bits (369), Expect = 0.0 Identities = 395/406 (97%) Strand = Plus / Minus Query: 1 aatgtaaaatcctgaaaaaacaaggctgtctgtctgtcgcnnnnnnnggggatcctgaaa 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1923 aatgtaaaatcctgaaaaaacaaggctgtctgtctgtcgcaaaaaaaggggatcctgaaa 1864 Query: 61 cgtaattcgcatctacacaaactctggtgaagcagaagcaaattgctcgcaagtcgttca 120 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 1863 cgtaattcgcatctacacaaactccggtgaagcaaaagcaaattgctcgcaagtcgttca 1804 Query: 121 cagcatttggtgctccttattgtttacacggtggccatacacaacgtttcttctttcttt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1803 cagcatttggtgctccttattgtttacacggtggccatacacaacgtttcttctttcttt 1744 Query: 181 tacctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctgg 240 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1743 tacctagcctcgtcttctaggttgcggaacccggctgtaaggtcgtcgtataacttctgg 1684 Query: 241 aatttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaagg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1683 aatttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaagg 1624 Query: 301 cggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1623 cggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatca 1564 Query: 361 gcattagctgctcgctccacagcctgattcgctaattgattgaaat 406 ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1563 gcattggctgctcgctccacagcctgattcgctaattgattgaaat 1518
>gb|DQ432014.1| Triticum aestivum vacuolar proton-ATPase subunit A mRNA, complete cds Length = 2358 Score = 549 bits (277), Expect = e-153 Identities = 343/363 (94%), Gaps = 4/363 (1%) Strand = Plus / Minus Query: 48 ggggatcctgaaacgtaattcgcatctacacaaactctggtgaagcagaa-gcaaattgc 106 |||| |||||||||||||||||||||||||||||||| ||||||||| || ||||||||| Sbjct: 2112 gggggtcctgaaacgtaattcgcatctacacaaactccggtgaagcaaaaagcaaattgc 2053 Query: 107 tcgcaagtcgttcacagcatttggtgctccttattgtttacacggtggccatacacaacg 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2052 tcgcaagtcgttcacagcatttggtgctccttattgtttacacggtggccatacacaatg 1993 Query: 167 tttcttctttc---ttttacctagcctcgtcttctaggttgcggaacccggcggtaaggt 223 |||||||| || ||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 1992 tttcttctctccttttttacctagcctcgtcttctaggttgcggaacccggtggtgaggt 1933 Query: 224 cgtcgtataacttctggaatttcgcgacaaggacgtcttcgccttctgcggggtcttcga 283 ||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1932 cgtcgtacaacttctggaattttgcgattaggacgtcttcgccttctgcggggtcttcga 1873 Query: 284 acttttgggatacaaggcggtaaaatagatcacccatgcgactctttacgacggcgtagg 343 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1872 acttttgggatacaaggcggtaaaatagatcgcccatgcgactctttacgacggcgtagg 1813 Query: 344 ttatcttgtgtccatcagcattagctgctcgctccacagcctgattcgctaattgattga 403 |||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 1812 ttatcttgtgtccatcagcattggctgctcgctccacggcctgattcgctaatgtattga 1753 Query: 404 aat 406 ||| Sbjct: 1752 aat 1750 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 14 gaaaaaacaaggctgtctgtctgtc 38 ||||||||||||||||||||||||| Sbjct: 2158 gaaaaaacaaggctgtctgtctgtc 2134
>dbj|AK061925.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-C02, full insert sequence Length = 1001 Score = 168 bits (85), Expect = 9e-39 Identities = 190/225 (84%) Strand = Plus / Minus Query: 182 acctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctgga 241 ||||||| || ||||||||||||||||| |||| || ||||| || || || ||||||| Sbjct: 710 acctagcttcatcttctaggttgcggaatccggttgtgaggtcatcatacaatttctgga 651 Query: 242 atttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaaggc 301 |||| ||||| ||||| ||||| || ||||| ||||| || |||||||| ||||| |||| Sbjct: 650 attttgcgactaggacatcttcaccctctgcagggtcctcaaacttttgagatactaggc 591 Query: 302 ggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatcag 361 | ||||||||||||||||| ||| ||||| ||| ||| ||||| || |||||||||| Sbjct: 590 gataaaatagatcacccatacgatgctttatgacactgtatgttattttttgtccatcag 531 Query: 362 cattagctgctcgctccacagcctgattcgctaattgattgaaat 406 |||||||||| ||||||||||||||||| |||||| |||||||| Sbjct: 530 cattagctgcacgctccacagcctgatttgctaatgtattgaaat 486
>dbj|AK069821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028L13, full insert sequence Length = 2315 Score = 168 bits (85), Expect = 9e-39 Identities = 190/225 (84%) Strand = Plus / Minus Query: 182 acctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctgga 241 ||||||| || ||||||||||||||||| |||| || ||||| || || || ||||||| Sbjct: 2009 acctagcttcatcttctaggttgcggaatccggttgtgaggtcatcatacaatttctgga 1950 Query: 242 atttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaaggc 301 |||| ||||| ||||| ||||| || ||||| ||||| || |||||||| ||||| |||| Sbjct: 1949 attttgcgactaggacatcttcaccctctgcagggtcctcaaacttttgagatactaggc 1890 Query: 302 ggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatcag 361 | ||||||||||||||||| ||| ||||| ||| ||| ||||| || |||||||||| Sbjct: 1889 gataaaatagatcacccatacgatgctttatgacactgtatgttattttttgtccatcag 1830 Query: 362 cattagctgctcgctccacagcctgattcgctaattgattgaaat 406 |||||||||| ||||||||||||||||| |||||| |||||||| Sbjct: 1829 cattagctgcacgctccacagcctgatttgctaatgtattgaaat 1785
>dbj|AK067063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089J10, full insert sequence Length = 2295 Score = 121 bits (61), Expect = 2e-24 Identities = 163/197 (82%) Strand = Plus / Minus Query: 190 tcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctggaatttcgcg 249 ||||||||||| ||||||||||||||||||||||| ||||| | |||||| |||||||| Sbjct: 1955 tcgtcttctagattgcggaacccggcggtaaggtcatcgtacagcttctgaaatttcgca 1896 Query: 250 acaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaaggcggtaaaat 309 | | || |||| ||| |||||||| || ||||| ||||| || || |||||||| ||| Sbjct: 1895 atcaaaacttctttgccctctgcgggatcctcgaatttttgcgacactaggcggtagaat 1836 Query: 310 agatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatcagcattagct 369 ||||| ||||||||| ||||| ||| ||| || ||||| |||||||||||| |||| Sbjct: 1835 agatcgcccatgcgatgctttatgacactgtatgtaatcttctgtccatcagcaccagct 1776 Query: 370 gctcgctccacagcctg 386 || |||||||| ||||| Sbjct: 1775 gcccgctccaccgcctg 1759
>gb|AY104754.1| Zea mays PCO134411 mRNA sequence Length = 2254 Score = 101 bits (51), Expect = 2e-18 Identities = 165/203 (81%) Strand = Plus / Minus Query: 187 gcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctggaatttc 246 ||||| |||||||||||||||||||| | ||||||||||||||| | |||| || || Sbjct: 1956 gcctcatcttctaggttgcggaacccagtggtaaggtcgtcgtacagtttcttaaacttg 1897 Query: 247 gcgacaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaaggcggtaa 306 |||| | | |||||||||||||| || || ||||||||||||||||| ||||| ||| Sbjct: 1896 ccgaccaaagcttcttcgccttctgcaggatcctcgaacttttgggatactaggcgataa 1837 Query: 307 aatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatcagcatta 366 |||||||| |||| ||| ||||| ||| ||| |||||||| || || |||| | | Sbjct: 1836 aatagatcccccaaccgatgctttatgacactgtatgttatcttatggccgtcagtacca 1777 Query: 367 gctgctcgctccacagcctgatt 389 ||||| ||||||||||||||||| Sbjct: 1776 gctgcccgctccacagcctgatt 1754
>gb|U36436.1|ZMU36436 Zea mays vacuolar ATPase 69 kDa subunit mRNA, partial cds Length = 2000 Score = 93.7 bits (47), Expect = 4e-16 Identities = 164/203 (80%) Strand = Plus / Minus Query: 187 gcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctggaatttc 246 ||||| |||||||||||||||||||| | ||||||||||||||| | |||| || || Sbjct: 1679 gcctcatcttctaggttgcggaacccagtggtaaggtcgtcgtacagtttcttaaacttg 1620 Query: 247 gcgacaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaaggcggtaa 306 |||| | | ||||| |||||||| || || ||||||||||||||||| ||||| ||| Sbjct: 1619 ccgaccaaagcttcttcaccttctgcaggatcctcgaacttttgggatactaggcgataa 1560 Query: 307 aatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatcagcatta 366 |||||||| |||| ||| ||||| ||| ||| |||||||| || || |||| | | Sbjct: 1559 aatagatcccccaaccgatgctttatgacactgtatgttatcttatggccgtcagtacca 1500 Query: 367 gctgctcgctccacagcctgatt 389 ||||| ||||||||||||||||| Sbjct: 1499 gctgcccgctccacagcctgatt 1477
>gb|BT024092.1| Zea mays clone EL01N0551D01 mRNA sequence Length = 2273 Score = 85.7 bits (43), Expect = 1e-13 Identities = 163/203 (80%) Strand = Plus / Minus Query: 187 gcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctggaatttc 246 ||||| |||||||||||||||||||| | |||||||||||| || | |||| || || Sbjct: 1967 gcctcatcttctaggttgcggaacccagtggtaaggtcgtcatacagtttcttaaacttg 1908 Query: 247 gcgacaaggacgtcttcgccttctgcggggtcttcgaacttttgggatacaaggcggtaa 306 |||| | | |||||||||||||| || || || |||||||||||||| ||||| ||| Sbjct: 1907 ccgaccaaagcttcttcgccttctgcaggatcctcaaacttttgggatactaggcgataa 1848 Query: 307 aatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtccatcagcatta 366 |||||||| |||| ||| ||||| ||| ||| |||||||| || || |||| | | Sbjct: 1847 aatagatcccccaaccgatgctttatgacactgtatgttatcttatggccgtcagtacca 1788 Query: 367 gctgctcgctccacagcctgatt 389 ||||| ||||||||||||||||| Sbjct: 1787 gctgcccgctccacagcctgatt 1765
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 79.8 bits (40), Expect = 6e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 298 aggcggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtcca 357 ||||| ||||||||||||||||| ||| ||||| ||| ||| ||||| || |||||| Sbjct: 26903185 aggcgataaaatagatcacccatacgatgctttatgacactgtatgttattttttgtcca 26903244 Query: 358 tcagcattagctgctcgctccacagcct 385 |||||||||||||| ||||||||||||| Sbjct: 26903245 tcagcattagctgcacgctccacagcct 26903272 Score = 73.8 bits (37), Expect = 4e-10 Identities = 91/109 (83%) Strand = Plus / Plus Query: 182 acctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctgga 241 ||||||| || ||||||||||||||||| |||| || ||||| || || || ||||||| Sbjct: 26902973 acctagcttcatcttctaggttgcggaatccggttgtgaggtcatcatacaatttctgga 26903032 Query: 242 atttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttttg 290 |||| ||||| ||||| ||||| || ||||| ||||| || |||||||| Sbjct: 26903033 attttgcgactaggacatcttcaccctctgcagggtcctcaaacttttg 26903081
>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0065C04 Length = 165270 Score = 79.8 bits (40), Expect = 6e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 298 aggcggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtcca 357 ||||| ||||||||||||||||| ||| ||||| ||| ||| ||||| || |||||| Sbjct: 26946 aggcgataaaatagatcacccatacgatgctttatgacactgtatgttattttttgtcca 27005 Query: 358 tcagcattagctgctcgctccacagcct 385 |||||||||||||| ||||||||||||| Sbjct: 27006 tcagcattagctgcacgctccacagcct 27033 Score = 73.8 bits (37), Expect = 4e-10 Identities = 91/109 (83%) Strand = Plus / Plus Query: 182 acctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctgga 241 ||||||| || ||||||||||||||||| |||| || ||||| || || || ||||||| Sbjct: 26734 acctagcttcatcttctaggttgcggaatccggttgtgaggtcatcatacaatttctgga 26793 Query: 242 atttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttttg 290 |||| ||||| ||||| ||||| || ||||| ||||| || |||||||| Sbjct: 26794 attttgcgactaggacatcttcaccctctgcagggtcctcaaacttttg 26842
>dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0051O02 Length = 169532 Score = 79.8 bits (40), Expect = 6e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 298 aggcggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtcca 357 ||||| ||||||||||||||||| ||| ||||| ||| ||| ||||| || |||||| Sbjct: 157811 aggcgataaaatagatcacccatacgatgctttatgacactgtatgttattttttgtcca 157870 Query: 358 tcagcattagctgctcgctccacagcct 385 |||||||||||||| ||||||||||||| Sbjct: 157871 tcagcattagctgcacgctccacagcct 157898 Score = 73.8 bits (37), Expect = 4e-10 Identities = 91/109 (83%) Strand = Plus / Plus Query: 182 acctagcctcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctgga 241 ||||||| || ||||||||||||||||| |||| || ||||| || || || ||||||| Sbjct: 157599 acctagcttcatcttctaggttgcggaatccggttgtgaggtcatcatacaatttctgga 157658 Query: 242 atttcgcgacaaggacgtcttcgccttctgcggggtcttcgaacttttg 290 |||| ||||| ||||| ||||| || ||||| ||||| || |||||||| Sbjct: 157659 attttgcgactaggacatcttcaccctctgcagggtcctcaaacttttg 157707
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 77.8 bits (39), Expect = 2e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 190 tcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctggaatttcgc 248 ||||||||||| ||||||||||||||||||||||| ||||| | |||||| |||||||| Sbjct: 4127190 tcgtcttctagattgcggaacccggcggtaaggtcatcgtacagcttctgaaatttcgc 4127132 Score = 56.0 bits (28), Expect = 9e-05 Identities = 73/88 (82%) Strand = Plus / Minus Query: 298 aggcggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtcca 357 |||||||| |||||||| ||||||||| ||||| ||| ||| || ||||| |||||| Sbjct: 4126997 aggcggtagaatagatcgcccatgcgatgctttatgacactgtatgtaatcttctgtcca 4126938 Query: 358 tcagcattagctgctcgctccacagcct 385 |||||| |||||| |||||||| |||| Sbjct: 4126937 tcagcaccagctgcccgctccaccgcct 4126910
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_E05 Length = 116305 Score = 77.8 bits (39), Expect = 2e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 190 tcgtcttctaggttgcggaacccggcggtaaggtcgtcgtataacttctggaatttcgc 248 ||||||||||| ||||||||||||||||||||||| ||||| | |||||| |||||||| Sbjct: 37204 tcgtcttctagattgcggaacccggcggtaaggtcatcgtacagcttctgaaatttcgc 37146 Score = 56.0 bits (28), Expect = 9e-05 Identities = 73/88 (82%) Strand = Plus / Minus Query: 298 aggcggtaaaatagatcacccatgcgactctttacgacggcgtaggttatcttgtgtcca 357 |||||||| |||||||| ||||||||| ||||| ||| ||| || ||||| |||||| Sbjct: 37011 aggcggtagaatagatcgcccatgcgatgctttatgacactgtatgtaatcttctgtcca 36952 Query: 358 tcagcattagctgctcgctccacagcct 385 |||||| |||||| |||||||| |||| Sbjct: 36951 tcagcaccagctgcccgctccaccgcct 36924
>dbj|AB189964.1| Pyrus communis PcVHA-A2 mRNA for vacuolar H+-ATPase catalytic subunit, complete cds Length = 2322 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Minus Query: 259 tcttcgccttctgcggggtcttcgaacttttgggatacaaggcggtaaaatagatcaccc 318 ||||| |||||||| || || || ||||||||||| || ||||||||||| ||||| ||| Sbjct: 1947 tcttccccttctgccggatcctcaaacttttgggacactaggcggtaaaagagatctccc 1888 Query: 319 a 319 | Sbjct: 1887 a 1887
>gb|AF367445.1| Prunus persica clone AtpvA1 V-ATPase catalytic subunit A (atpvA1) mRNA, complete cds Length = 2336 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Minus Query: 259 tcttcgccttctgcggggtcttcgaacttttgggatacaaggcggtaaaatagatcaccc 318 ||||| |||||||| || || || || ||||| || |||||||||||||| ||||| ||| Sbjct: 1929 tcttccccttctgccggatcctcaaatttttgtgacacaaggcggtaaaagagatctccc 1870 Query: 319 a 319 | Sbjct: 1869 a 1869
>emb|AJ276326.1|MCR276326 Mesembryanthemum crystallinum mRNA for putative vacuolar ATP synthase subunit A (vatA gene) Length = 2396 Score = 42.1 bits (21), Expect = 1.4 Identities = 54/65 (83%) Strand = Plus / Minus Query: 226 tcgtataacttctggaatttcgcgacaaggacgtcttcgccttctgcggggtcttcgaac 285 ||||| |||||||||||||| ||||| || |||||| ||||| || ||||| ||||| Sbjct: 1980 tcgtacaacttctggaattttgcgacgagagtgtcttctccttcagcagggtcctcgaat 1921 Query: 286 ttttg 290 ||||| Sbjct: 1920 ttttg 1916
>gb|J03769.1|DARVHATPA Daucus carota 70kD vacuolar H+-ATPase mRNA, complete cds Length = 2397 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 agctgctcgctccacagcctgatt 389 |||| ||||||||||||||||||| Sbjct: 1839 agctcctcgctccacagcctgatt 1816
>ref|XM_547252.2| PREDICTED: Canis familiaris similar to solute carrier family 25 member 24 isoform 1 (LOC490131), mRNA Length = 1467 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gaagcagaagcaaattgctc 108 |||||||||||||||||||| Sbjct: 1106 gaagcagaagcaaattgctc 1087
>gb|AC097529.2| Homo sapiens BAC clone RP11-669F3 from 4, complete sequence Length = 54264 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aatgtaaaatcctgaaaaaa 20 |||||||||||||||||||| Sbjct: 28726 aatgtaaaatcctgaaaaaa 28707
>emb|CR391627.1| Gallus gallus finished cDNA, clone ChEST893o3 Length = 1074 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 aaaacaaggctgtctgtctg 36 |||||||||||||||||||| Sbjct: 747 aaaacaaggctgtctgtctg 728
>dbj|AB189963.1| Pyrus communis PcVHA-A1 mRNA for vacuolar H+-ATPase catalytic subunit, complete cds Length = 2236 Score = 40.1 bits (20), Expect = 5.4 Identities = 80/100 (80%) Strand = Plus / Minus Query: 220 aggtcgtcgtataacttctggaatttcgcgacaaggacgtcttcgccttctgcggggtct 279 ||||| ||||||| ||||| ||||| || ||||| | ||||| ||||| || || || Sbjct: 1901 aggtcctcgtatagcttcttaaattttgccacaagagcttcttccccttcagccggatcc 1842 Query: 280 tcgaacttttgggatacaaggcggtaaaatagatcaccca 319 || |||||||| || || ||||||||||| ||||| |||| Sbjct: 1841 tcaaacttttgagacactaggcggtaaaagagatctccca 1802
>emb|CR956648.9| Pig DNA sequence from clone CH242-155F23 on chromosome 17, complete sequence Length = 168798 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 cagaagcaaattgctcgcaa 112 |||||||||||||||||||| Sbjct: 157300 cagaagcaaattgctcgcaa 157281 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,634,890 Number of Sequences: 3902068 Number of extensions: 3634890 Number of successful extensions: 79666 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79562 Number of HSP's gapped (non-prelim): 96 length of query: 406 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 384 effective length of database: 17,147,199,772 effective search space: 6584524712448 effective search space used: 6584524712448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
