| Clone Name | rbast46b02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | LIPP_PIG (P00591) Pancreatic triacylglycerol lipase (EC 3.1.1.3)... | 28 | 4.5 | 2 | SSB_BRAJA (Q89L50) Single-stranded DNA-binding protein (SSB) (He... | 27 | 9.9 | 3 | STAB2_MOUSE (Q8R4U0) Stabilin-2 precursor [Contains: Short form ... | 27 | 9.9 |
|---|
>LIPP_PIG (P00591) Pancreatic triacylglycerol lipase (EC 3.1.1.3) (Pancreatic| lipase) (PL) Length = 450 Score = 28.5 bits (62), Expect = 4.5 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +2 Query: 44 DPLQPTRSEIRMGRKRRRILHGF 112 DP T S RM RK R I+HGF Sbjct: 56 DPSTITNSNFRMDRKTRFIIHGF 78
>SSB_BRAJA (Q89L50) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 164 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = +1 Query: 34 VTERSITTYQV-RDKNGEEEKENTTWLFYRDERHRFIVFS 150 + SI T + RDKN E KE T W HR ++F+ Sbjct: 29 IANLSIATSETWRDKNSGERKEKTEW-------HRVVIFN 61
>STAB2_MOUSE (Q8R4U0) Stabilin-2 precursor [Contains: Short form stabilin-2]| Length = 2559 Score = 27.3 bits (59), Expect = 9.9 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = -2 Query: 57 GCNGSLCDRSWTGNGVNCL 1 G +C R WTGNG +C+ Sbjct: 899 GTYSCVCQRGWTGNGRDCV 917 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,903,516 Number of Sequences: 219361 Number of extensions: 522327 Number of successful extensions: 1205 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1173 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1205 length of database: 80,573,946 effective HSP length: 80 effective length of database: 63,025,066 effective search space used: 1512601584 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)