>M3K6_HUMAN (O95382) Mitogen-activated protein kinase kinase kinase 6 (EC|
           2.7.11.25)
          Length = 1011

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = +3

Query: 147 AEKRSLQLRALSG*TRLQSSKQ--MRDPILSTQRPSLFPVSPRLACRPGNLPSGA 305
           AE ++  LR      RL++S Q  + DP L   + S  P SPR A RP + PS +
Sbjct: 600 AEAQAFLLRTFEPDPRLRASAQTLLGDPFLQPGKRSRSPSSPRHAPRPSDAPSAS 654

>HSP1_ORCOR (P24713) Sperm protamine P1 (Cysteine-rich protamine)|
          Length = 46

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +2

Query: 257 RFASPRLSS-RQPTLRCISRWKHPDGSVRCCRRSRWIVLRRYPGHPCEQR 403
           R  SP  S  R+P  RC  R       +RCCRR R +  RRY    C ++
Sbjct: 4   RCRSPSQSRCRRPRRRCRRR-------IRCCRRQRRVCCRRYTTTRCARQ 46

>Y966_TREPA (O83932) Hypothetical protein TP0966 precursor|
          Length = 544

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 23/83 (27%), Positives = 31/83 (37%)
 Frame = +2

Query: 89  RHKPACRPAAPRKTTSCEVCGEEKPTITGAVGLNTLTVLKANAGSHPKHTETKFVPRFAS 268
           R     RP  P     C +CG     +  AVG     V      + P HT ++ VP    
Sbjct: 4   RRMLCARPWGP-SCVVCALCGA-LAALVPAVGAQEQAVPAPGTPAPPAHTASEAVPPAPE 61

Query: 269 PRLSSRQPTLRCISRWKHPDGSV 337
           PR    QP+    +    P G+V
Sbjct: 62  PRAEGEQPSPLVPTALPVPGGAV 84

>Y2340_MYCBO (P64994) Hypothetical protein Mb2340c|
          Length = 284

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = -2

Query: 270 GEAKRGTNLVSVCLGWDPAFALRTVSVFNPTAPVIVGFSS--PHTSQLVVLRGAAGRQAG 97
           G  K     V+  + WD    L + +VFN   P +    +  P TS+LV LRGAA     
Sbjct: 112 GVGKEYLGWVTGPISWDHNTDL-SAAVFNGFLPAVARMRALDPVTSELVRLRGAAQHNCR 170

Query: 96  LCR 88
           +C+
Sbjct: 171 VCK 173

>Y2313_MYCTU (P64993) Hypothetical protein Rv2313c/MT2376|
          Length = 284

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = -2

Query: 270 GEAKRGTNLVSVCLGWDPAFALRTVSVFNPTAPVIVGFSS--PHTSQLVVLRGAAGRQAG 97
           G  K     V+  + WD    L + +VFN   P +    +  P TS+LV LRGAA     
Sbjct: 112 GVGKEYLGWVTGPISWDHNTDL-SAAVFNGFLPAVARMRALDPVTSELVRLRGAAQHNCR 170

Query: 96  LCR 88
           +C+
Sbjct: 171 VCK 173

>SIAL_HUMAN (P21815) Bone sialoprotein-2 precursor (Bone sialoprotein II) (BSP|
           II) (Cell-binding sialoprotein) (Integrin-binding
           sialoprotein)
          Length = 317

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -3

Query: 428 KAT-ENPADNAAHKDDQGNAEEQSTANADNNGQIHPGAST 312
           KAT E  +D    ++++GN  E+S A  D N Q   G ST
Sbjct: 142 KATKEKESDEEEEEEEEGNENEESEAEVDENEQGINGTST 181

>RFAF_ECOLI (P37692) ADP-heptose--LPS heptosyltransferase 2 (EC 2.-.-.-)|
           (ADP-heptose--LPS heptosyltransferase II)
          Length = 348

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +1

Query: 280 VQATYPQVHFTVEAPGWICPLLS 348
           +QA YPQ    V AP W  PLLS
Sbjct: 24  LQARYPQAIIDVMAPAWCRPLLS 46

>HIS6_THET8 (Q7SIB9) Imidazole glycerol phosphate synthase subunit hisF (EC|
           4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase
           subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit
           hisF)
          Length = 252

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = -2

Query: 294 VGCLDDRRGEAKRGTNLVSVCLGWDPAFALRTVSVFNPTAPVIVGFSSPHTSQLVVL 124
           V CLD   G   +G N V++    DP  A R          V +  S+ H  + ++L
Sbjct: 8   VPCLDVHAGRVVKGVNFVNLRDAGDPVEAARAYDEAGADELVFLDISATHEERAILL 64

>HIS6_THET2 (P62453) Imidazole glycerol phosphate synthase subunit hisF (EC|
           4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase
           subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit
           hisF)
          Length = 252

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = -2

Query: 294 VGCLDDRRGEAKRGTNLVSVCLGWDPAFALRTVSVFNPTAPVIVGFSSPHTSQLVVL 124
           V CLD   G   +G N V++    DP  A R          V +  S+ H  + ++L
Sbjct: 8   VPCLDVHAGRVVKGVNFVNLRDAGDPVEAARAYDEAGADELVFLDISATHEERAILL 64

>ARGJ_CHRVO (Q7P0T8) Arginine biosynthesis bifunctional protein argJ [Includes:|
           Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine
           acetyltransferase) (Ornithine transacetylase) (OATase);
           Amino-acid acetyltransferase (EC 2.3.1.1)
           (N-acetylglutamate syn
          Length = 405

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 443 AAEATKATENPADNAAHKDDQGNAEEQSTANADNNGQIHPGASTV 309
           AAEA   T+  A  A+ + D G      T  A  +G IHP  +T+
Sbjct: 146 AAEAIMTTDTLAKAASRRLDIGGKAVTVTGIAKGSGMIHPNMATM 190


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,595,732
Number of Sequences: 219361
Number of extensions: 1261001
Number of successful extensions: 3808
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3806
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)