ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast42f02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 39 0.002
2APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 35 0.061
3FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 32 0.52
4GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX) ... 28 7.5
5ESC1_SCHPO (Q04635) Protein esc1 27 9.8

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 19/43 (44%), Positives = 22/43 (51%)
 Frame = -2

Query: 296 CADPSAYANWDGVHLTEAAYHAIADSILHGPYTSPRLL*PPAC 168
           CA PS   NWDG H TEAA     D I  G ++ P +    AC
Sbjct: 337 CACPSVRVNWDGAHYTEAANEYFFDQISTGAFSDPPVPLNMAC 379



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 34.7 bits (78), Expect = 0.061
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -2

Query: 326 ANCGVRGSSVCADPSAYANWDGVHLTEAAYHAI 228
           A C    S +C + S+Y  WDGVH T+ AY  I
Sbjct: 488 ALCKKSTSKICPNTSSYLFWDGVHPTQRAYKTI 520



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 31.6 bits (70), Expect = 0.52
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 296 CADPSAYANWDGVHLTEAAYHAIADSILHG 207
           C +P     WDGVH T+AA   I D I  G
Sbjct: 335 CDEPDKAVVWDGVHFTQAANKFIFDKIAPG 364



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>GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX)|
           (Endo-1,4-beta-glucanase) (Cellulase) (Fragment)
          Length = 224

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 314 VRGSSVCADPSAYANWDGVHLTEAAYHAIAD 222
           V+ S +  D +   +WDG+HL+E  Y  IA+
Sbjct: 101 VKLSEIQFDRNTDISWDGLHLSEIGYTKIAN 131



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>ESC1_SCHPO (Q04635) Protein esc1|
          Length = 413

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +2

Query: 35  GSTSLPPRSSLFCPVGRPQPLH 100
           G T LPP + L  P  RPQP H
Sbjct: 62  GQTRLPPINCLAEPFNRPQPWH 83


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,891,557
Number of Sequences: 219361
Number of extensions: 503249
Number of successful extensions: 1343
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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