ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast42e03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SCRK2_ORYSA (Q944F5) Fructokinase-2 (EC 2.7.1.4) (Fructokinase I... 55 3e-08
2SCRK2_MAIZE (Q6XZ78) Fructokinase-2 (EC 2.7.1.4) (ZmFRK2) 51 6e-07
3SCRK_SOLTU (P37829) Fructokinase (EC 2.7.1.4) 41 6e-04
4SCRK1_MAIZE (Q6XZ79) Fructokinase-1 (EC 2.7.1.4) (ZmFRK1) 40 0.001
5SCRK1_ORYSA (Q944F4) Fructokinase-1 (EC 2.7.1.4) (Fructokinase I... 38 0.005
6SCRK_VIBAL (P22824) Fructokinase (EC 2.7.1.4) 29 3.2
7MCEL_SFVKA (P25950) mRNA capping enzyme large subunit [Includes:... 28 5.5
8YDJE_BACSU (O34768) Hypothetical sugar kinase ydjE 27 9.4

>SCRK2_ORYSA (Q944F5) Fructokinase-2 (EC 2.7.1.4) (Fructokinase II) (OsFKII)|
          Length = 336

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 26/40 (65%), Positives = 29/40 (72%)
 Frame = -3

Query: 362 LREVLQFSNACGAICTTKKGAIPXXXXXXXXLEVISKGSN 243
           LRE L+FSNACGAICTTKKGAIP         E+ISK +N
Sbjct: 297 LREALKFSNACGAICTTKKGAIPALPTVAVAQELISKAAN 336



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>SCRK2_MAIZE (Q6XZ78) Fructokinase-2 (EC 2.7.1.4) (ZmFRK2)|
          Length = 335

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 23/39 (58%), Positives = 28/39 (71%)
 Frame = -3

Query: 362 LREVLQFSNACGAICTTKKGAIPXXXXXXXXLEVISKGS 246
           LRE L+FSNACGAICTTKKGAIP         ++I+K +
Sbjct: 297 LREALKFSNACGAICTTKKGAIPALPTVATAQDLIAKAN 335



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>SCRK_SOLTU (P37829) Fructokinase (EC 2.7.1.4)|
          Length = 319

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 21/39 (53%), Positives = 26/39 (66%)
 Frame = -3

Query: 362 LREVLQFSNACGAICTTKKGAIPXXXXXXXXLEVISKGS 246
           L+EVL+FS ACGAI TTKKGAIP        L ++  G+
Sbjct: 281 LKEVLRFSCACGAITTTKKGAIPALPTESEALTLLKGGA 319



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>SCRK1_MAIZE (Q6XZ79) Fructokinase-1 (EC 2.7.1.4) (ZmFRK1)|
          Length = 323

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 20/37 (54%), Positives = 25/37 (67%)
 Frame = -3

Query: 362 LREVLQFSNACGAICTTKKGAIPXXXXXXXXLEVISK 252
           L E ++F+NACGAI TTKKGAIP        L++I K
Sbjct: 286 LVESIKFANACGAITTTKKGAIPSLPTEAEVLQLIEK 322



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>SCRK1_ORYSA (Q944F4) Fructokinase-1 (EC 2.7.1.4) (Fructokinase I) (OsFKI)|
          Length = 323

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = -3

Query: 362 LREVLQFSNACGAICTTKKGAIP 294
           L E ++F+NACGAI  TKKGAIP
Sbjct: 286 LEEAIKFANACGAITATKKGAIP 308



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>SCRK_VIBAL (P22824) Fructokinase (EC 2.7.1.4)|
          Length = 307

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 10/18 (55%), Positives = 16/18 (88%)
 Frame = -3

Query: 350 LQFSNACGAICTTKKGAI 297
           +Q++N CGA+ TT+KGA+
Sbjct: 275 IQWANGCGALATTQKGAM 292



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>MCEL_SFVKA (P25950) mRNA capping enzyme large subunit [Includes:|
           Polynucleotide 5'-triphosphatase (EC 3.1.3.33) (mRNA
           5'-triphosphatase) (TPase); mRNA guanylyltransferase (EC
           2.7.7.50) (GTP--RNA guanylyltransferase) (GTase)]
          Length = 836

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 185 FIIRYELSFSSCVSV*PRGRLIKSKHVW*FWLLSL 81
           + IRY+ +F S  SV   G  +K  +VW  +L+ L
Sbjct: 280 YTIRYDTTFESNESVTLYGEAVKQNNVWQIYLIKL 314



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>YDJE_BACSU (O34768) Hypothetical sugar kinase ydjE|
          Length = 320

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 362 LREVLQFSNACGAICTTKKGAI 297
           LRE++ F+N  GA+  TK GAI
Sbjct: 286 LREIVAFANKVGALVCTKIGAI 307


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,288,465
Number of Sequences: 219361
Number of extensions: 575432
Number of successful extensions: 1039
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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