ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast40h05 |
|---|---|
| Clone Library Name | barley_pub |
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 37.4 bits (85), Expect = 0.009 Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Frame = +1 Query: 115 FHGPPGAHRTPRDVRCSSGHWTLPPAEP-FPGLAGR*AEKITLPEAPAGVSGLPNVAVNR 291 F GPPGA P+ V SG PP P FPG G P PAG+ G+P + R Sbjct: 390 FEGPPGAPG-PQGVVGPSG----PPGPPGFPGDPG--------PPGPAGLPGIPGIDGIR 436 Query: 292 HIPAREILTRFPFGG 336 P I+ F F G Sbjct: 437 GPPGTVIMMPFQFAG 451
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 33.5 bits (75), Expect = 0.12 Identities = 24/57 (42%), Positives = 27/57 (47%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLP 273 GP +GPPG P R G P A FPG AGR T P P+G+SG P Sbjct: 761 GPSGPNGPPG----PAGSRGDGGP---PGATGFPGAAGR-----TGPPGPSGISGPP 805 Score = 27.3 bits (59), Expect = 8.9 Identities = 20/67 (29%), Positives = 25/67 (37%), Gaps = 8/67 (11%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEP-------FPGLAGR*AEK-ITLPEAPAG 258 GP F GPPG P + PP P PG GR E+ + P+ G Sbjct: 107 GPQGFQGPPGEPGEPGQTGPAGARG--PPGPPGKAGEDGHPGKPGRPGERGVVGPQGARG 164 Query: 259 VSGLPNV 279 G P + Sbjct: 165 FPGTPGL 171
>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)| Length = 1027 Score = 33.1 bits (74), Expect = 0.16 Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK----ITLPEAPAGVSG 267 GPP GP GA R P R G L A+ PG AG+ E+ T P PAG G Sbjct: 451 GPPGAAGPTGA-RGPPGPRGQQGFQGLAGAQGTPGEAGKTGERGAVGATGPSGPAGPGG 508
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 32.3 bits (72), Expect = 0.28 Identities = 23/57 (40%), Positives = 27/57 (47%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLP 273 GP +GPPG P R G P A FPG AGR T P P+G++G P Sbjct: 763 GPSGPNGPPG----PAGSRGDGGP---PGATGFPGAAGR-----TGPPGPSGITGPP 807
>CATB_STRRE (O87864) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)| Length = 740 Score = 32.3 bits (72), Expect = 0.28 Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 16/85 (18%) Frame = -2 Query: 214 LPTLETVQPEVG-SSGRKSTARR------AVSGAPPAAHENP-EDRVPFTPGRT-----H 74 L TLE VQ E SSG K + +G AA E E +VPFTPGR H Sbjct: 518 LRTLENVQQEFNASSGAKKVSLADLIVLGGAAGVEKAAKEAGFEIQVPFTPGRVDATEEH 577 Query: 73 NRIRS---PR*TASGQWNNVGKGSR 8 + S TA G N +GKG+R Sbjct: 578 TDVESFEALEPTADGFRNYLGKGNR 602
>COFA1_MOUSE (O35206) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV)] Length = 1367 Score = 32.3 bits (72), Expect = 0.28 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = +1 Query: 184 PPAEP-FPGLAGR*AEKITLPEAPAGVSGLP 273 PP P +PGL G+ E + P+ P G+ GLP Sbjct: 1033 PPGLPGYPGLVGQKGEAVVGPQGPPGIPGLP 1063 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/43 (39%), Positives = 19/43 (44%) Frame = +1 Query: 70 GYEYDRA*TVLGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEP 198 G + DR T+ GPP GPPG P V G PA P Sbjct: 906 GAKGDRGVTLPGPPGLPGPPGPPGPPGAVVNIKGAVFPIPARP 948
>FRAT1_HUMAN (Q92837) Proto-oncogene FRAT1 (Frequently rearranged in advanced| T-cell lymphomas) (Frat-1) Length = 279 Score = 32.0 bits (71), Expect = 0.36 Identities = 26/64 (40%), Positives = 29/64 (45%), Gaps = 6/64 (9%) Frame = +2 Query: 8 PTSLAYIVPLARGCSP----WRPDAVMSTTGRERYSVLRIFMGRRGRTGHRAT--CGALP 169 P LA VP + SP P A+ T G VLR +G RGR RA C A Sbjct: 74 PGPLAAAVPADKARSPAVPLLLPPALAETVGPAPPGVLRCALGDRGRVRGRAAPYCVAEL 133 Query: 170 ATGP 181 ATGP Sbjct: 134 ATGP 137
>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor| Length = 1759 Score = 32.0 bits (71), Expect = 0.36 Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 5/61 (8%) Frame = +1 Query: 103 GPPDFHGP---PGAHRTPRDVRCS--SGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSG 267 GP HG PGA PR SG LP +PG+ G E + E PAG+ G Sbjct: 564 GPNGDHGDCGMPGAPGKPRSAGSDGLSGSPGLPGIPGYPGMKGEAGEIVGPMENPAGIPG 623 Query: 268 L 270 L Sbjct: 624 L 624
>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor| Length = 1763 Score = 31.6 bits (70), Expect = 0.47 Identities = 37/117 (31%), Positives = 47/117 (40%), Gaps = 10/117 (8%) Frame = +1 Query: 79 YDRA*TVLGPPDFHGPPGAHRTPR-----DVRCSSGHWTLPPAEPFPGLAGR*AEK-ITL 240 Y A + G P G PGA P R + G P PGL G E + Sbjct: 1304 YAGAAGIKGEPGLPGIPGAKGEPGLSGIPGKRGNDGIPGKPGPAGLPGLPGMKGESGLPG 1363 Query: 241 PEAPAGVSGLPNVAVNRHI---PAREILTRFPFGGCA*SRYLPGLPRPLG-SAYPCA 399 P+ PAG+ GLP + + P ++ T FP +PGLP G S YP A Sbjct: 1364 PQGPAGLPGLPGLKGEPGLPGFPGQKGETGFPG-----QPGIPGLPGMKGDSGYPGA 1415 Score = 29.6 bits (65), Expect = 1.8 Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 13/102 (12%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLP-----PAEP-------FPGLAGR*AEKITLPE 246 G P G PG PR ++ +G P P P PGL G+ + IT P+ Sbjct: 1220 GLPGLEGQPG----PRGMKGEAGLPGAPGRDGLPGLPGMKGEAGLPGLPGQPGKSITGPK 1275 Query: 247 APAGVSGLPNVAVNRHIPAREILTRFP-FGGCA*SRYLPGLP 369 AG+ GLP +P + P + G A + PGLP Sbjct: 1276 GNAGLPGLPGKDGLPGLPGLKGEPGKPGYAGAAGIKGEPGLP 1317 Score = 28.5 bits (62), Expect = 4.0 Identities = 31/101 (30%), Positives = 36/101 (35%), Gaps = 2/101 (1%) Frame = +1 Query: 97 VLGPPDFHGPPGA--HRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGL 270 V GPP GPPGA PR V + PGL G+ + G+ GL Sbjct: 434 VQGPPGLAGPPGAKGEPGPRGV----------DGQSIPGLPGK--------DGRPGLDGL 475 Query: 271 PNVAVNRHIPAREILTRFPFGGCA*SRYLPGLPRPLGSAYP 393 P +P R P G LPG P P G P Sbjct: 476 PGRKGEMGLPG----VRGPPGDSL--NGLPGPPGPRGPQGP 510 Score = 28.1 bits (61), Expect = 5.2 Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEA-PAGVSGLPNV 279 G P GP G P V + T+ E PG+ G EK EA P G G P V Sbjct: 227 GDPGEQGPRGPQGPPGPVPSTGAKGTIIGPEGAPGMKG---EKGDPGEAGPRGFPGTPGV 283 Query: 280 AVNRHIP 300 A +P Sbjct: 284 AGQPGLP 290 Score = 27.7 bits (60), Expect = 6.8 Identities = 32/109 (29%), Positives = 40/109 (36%), Gaps = 12/109 (11%) Frame = +1 Query: 97 VLGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AE----KITLPEAPA--- 255 ++G P GPPG P+ +G P + PGL G E + +P P Sbjct: 643 IVGAPGLPGPPG----PKGEPGLTGLPEKPGKDGIPGLPGLKGEPGYGQPGMPGLPGMKG 698 Query: 256 -----GVSGLPNVAVNRHIPAREILTRFPFGGCA*SRYLPGLPRPLGSA 387 G+ GLP P E R G LPGLP P G A Sbjct: 699 DAGLPGLPGLPGAVGPMGPPVPESQLR---PGPPGKDGLPGLPGPKGEA 744
>CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor| Length = 675 Score = 31.2 bits (69), Expect = 0.62 Identities = 33/95 (34%), Positives = 36/95 (37%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVA 282 GPP +GPPG L PA P PG AG+ + P P G SGLP Sbjct: 88 GPPGPNGPPG------------DRGALGPAGP-PGPAGK---GLPGPPGPPGPSGLPGGN 131 Query: 283 VNRHIPAREILTRFPFGGCA*SRYLPGLPRPLGSA 387 R P L FP PG P P G A Sbjct: 132 GFRGPPGPSGLPGFPGP--------PGPPGPPGLA 158
>CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor| Length = 1691 Score = 31.2 bits (69), Expect = 0.62 Identities = 34/107 (31%), Positives = 42/107 (39%), Gaps = 18/107 (16%) Frame = +1 Query: 103 GPPDFHGPPGAHRT--------PRDVRCSSGHWTLPPAEPFPGLAGR*AEK-------IT 237 G P GPPG + P+ V+ S G +P PGL G+ EK I Sbjct: 1015 GKPGLTGPPGLKGSIGDMGFPGPQGVKGSPGPPGVPGQPGSPGLPGQKGEKGDPGVSGIG 1074 Query: 238 LP--EAPAGVSGLPNVAVNRHIPAREILTRFP-FGGCA*SRYLPGLP 369 LP P G +GLP N I T P G ++ PGLP Sbjct: 1075 LPGLPGPKGEAGLPGYPGNPGIKGSMGDTGLPGLPGTPGAKGQPGLP 1121 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEP 198 GPP GPPG H +P D C +G PP P Sbjct: 435 GPP---GPPGPHISPSDEICETG----PPGPP 459 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 1/56 (1%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEP-FPGLAGR*AEKITLPEAPAGVSG 267 G P GPPGA TP + P P FPG G + P P G+ G Sbjct: 716 GFPGIQGPPGAPGTPGRIGLEG-----PSGPPGFPGPKGEPGLGLPGPPGPPGLPG 766
>CO8A1_HUMAN (P27658) Collagen alpha-1(VIII) chain precursor (Endothelial| collagen) Length = 744 Score = 31.2 bits (69), Expect = 0.62 Identities = 35/111 (31%), Positives = 43/111 (38%), Gaps = 7/111 (6%) Frame = +1 Query: 70 GYEYDRA*TVLGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPE- 246 G+ A V GPP HGPPG P + P FPG G + E Sbjct: 244 GFGMPGAPGVKGPPGMHGPPGPVGLPGVGK--------PGVTGFPGPQGPLGKPGAPGEP 295 Query: 247 APAGVSGLPNVAVNRHI-----PAREILTRFP-FGGCA*SRYLPGLPRPLG 381 P G G+P V I P ++ + P F G + LPGLP P G Sbjct: 296 GPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPG 346
>US10_EHV4 (P18349) 28 kDa protein (ORF3)| Length = 259 Score = 30.8 bits (68), Expect = 0.80 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -3 Query: 294 VAVDGDVRKSGDAGGGLG 241 +AVDGDVR GD GGG G Sbjct: 40 MAVDGDVRTGGDCGGGEG 57
>CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor| Length = 1690 Score = 30.4 bits (67), Expect = 1.1 Identities = 30/94 (31%), Positives = 35/94 (37%), Gaps = 1/94 (1%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITL-PEAPAGVSGLPNV 279 G P GPPG H R G LP PG G + + P PAG+ GLP Sbjct: 816 GFPGVPGPPG-HSCERGAPGIPGQPGLPGYPGSPGAPGGKGQPGDVGPPGPAGMKGLPG- 873 Query: 280 AVNRHIPAREILTRFPFGGCA*SRYLPGLPRPLG 381 +P R G LPG+P P G Sbjct: 874 -----LPGRP--------GAHGPPGLPGIPGPFG 894 Score = 30.4 bits (67), Expect = 1.1 Identities = 33/113 (29%), Positives = 38/113 (33%), Gaps = 20/113 (17%) Frame = +1 Query: 103 GPPDFHGPPGAHRTP-----RDVRCSSGHWTLP--------PAEP-------FPGLAGR* 222 GPP F GPPG P + S GH P P P PG G Sbjct: 677 GPPGFDGPPGPKGFPGPQGAPGLSGSDGHKGRPGTPGTAEIPGPPGFRGDMGDPGFGG-- 734 Query: 223 AEKITLPEAPAGVSGLPNVAVNRHIPAREILTRFPFGGCA*SRYLPGLPRPLG 381 EK + P P G G P V + IP G +PG+ P G Sbjct: 735 -EKGSSPVGPPGPPGSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPGIKGPRG 786 Score = 30.0 bits (66), Expect = 1.4 Identities = 31/101 (30%), Positives = 36/101 (35%), Gaps = 4/101 (3%) Frame = +1 Query: 103 GPPDFHGPPG----AHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGL 270 GPP GPPG R P+D+ P PG G + P+ P G G Sbjct: 1233 GPPGSSGPPGPAGATGRAPKDI-------------PDPGPPG--DQGPPGPDGPRGAPGP 1277 Query: 271 PNVAVNRHIPAREILTRFPFGGCA*SRYLPGLPRPLGSAYP 393 P +P L R G C LPG P P G P Sbjct: 1278 PG------LPGSVDLLRGEPGDCG----LPGPPGPPGPPGP 1308 Score = 29.6 bits (65), Expect = 1.8 Identities = 25/71 (35%), Positives = 28/71 (39%), Gaps = 3/71 (4%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK---ITLPEAPAGVSGLP 273 GPP G PG + DV PP P GL GR E + P P G GLP Sbjct: 367 GPPGDPGFPGRYGETGDVG--------PPGPP--GLLGRPGEACAGMIGPPGPQGFPGLP 416 Query: 274 NVAVNRHIPAR 306 + IP R Sbjct: 417 GLPGEAGIPGR 427
>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)| Length = 1670 Score = 30.4 bits (67), Expect = 1.1 Identities = 31/108 (28%), Positives = 38/108 (35%), Gaps = 14/108 (12%) Frame = +1 Query: 100 LGPPDFHGPPGAHRT--------------PRDVRCSSGHWTLPPAEPFPGLAGR*AEKIT 237 +GPP F GP + T PR R G P+ P PG+ G Sbjct: 335 IGPPGFRGPTEYYDTYQEKGDEGTPGPPGPRGARGPQG-----PSGP-PGVPGSPGSSRP 388 Query: 238 LPEAPAGVSGLPNVAVNRHIPAREILTRFPFGGCA*SRYLPGLPRPLG 381 G GL R P ++ + GCA S LPG P P G Sbjct: 389 GLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPGPPG 436 Score = 27.7 bits (60), Expect = 6.8 Identities = 30/106 (28%), Positives = 36/106 (33%), Gaps = 7/106 (6%) Frame = +1 Query: 97 VLGPPDFHGPPG-----AHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK--ITLPEAPA 255 +LGPP GPPG P +R G + PG AG E + P P Sbjct: 1129 LLGPPGIRGPPGLPGFPGSPGPMGIRGDQGR------DGIPGPAGEKGETGLLRAPPGPR 1182 Query: 256 GVSGLPNVAVNRHIPAREILTRFPFGGCA*SRYLPGLPRPLGSAYP 393 G G +R P FP LPG +G A P Sbjct: 1183 GNPGAQGAKGDRGAPG------FP--------GLPGRKGAMGDAGP 1214
>CO4A1_MOUSE (P02463) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/67 (31%), Positives = 28/67 (41%) Frame = +1 Query: 100 LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNV 279 +GPP GPPG P SSG + + FPG G + P+ G GLP + Sbjct: 801 IGPPGAMGPPGGEGPPG----SSGPPGIKGEKGFPGFPGL---DMPGPKGDKGSQGLPGL 853 Query: 280 AVNRHIP 300 +P Sbjct: 854 TGQSGLP 860
>CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/67 (29%), Positives = 27/67 (40%) Frame = +1 Query: 100 LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNV 279 +GPP GPPG P SG + + FPG G + P+ G GLP + Sbjct: 801 IGPPGARGPPGGQGPPG----LSGPPGIKGEKGFPGFPGL---DMPGPKGDKGAQGLPGI 853 Query: 280 AVNRHIP 300 +P Sbjct: 854 TGQSGLP 860
>CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor| Length = 1712 Score = 30.4 bits (67), Expect = 1.1 Identities = 35/124 (28%), Positives = 42/124 (33%), Gaps = 27/124 (21%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSG---------HWTLPPA-----EPFPGLAGR*AEKITL 240 GPP F GPPG TP + C + + P + PGL G Sbjct: 642 GPPGFLGPPGPAGTPGQIDCDTDVKRAVGGDRQEAIQPGCIAGPKGLPGLPG-------- 693 Query: 241 PEAPAGVSGLPNV---------AVNRHIPAREILTRFP----FGGCA*SRYLPGLPRPLG 381 P P G GL + R +P FP F G S+ GLP P G Sbjct: 694 PPGPTGAKGLRGIPGFAGADGGPGPRGLPGDAGREGFPGPPGFIGPRGSKGAVGLPGPDG 753 Query: 382 SAYP 393 S P Sbjct: 754 SPGP 757
>CO8A1_RABIT (P14282) Collagen alpha-1(VIII) chain precursor (Endothelial| collagen) Length = 744 Score = 30.0 bits (66), Expect = 1.4 Identities = 33/104 (31%), Positives = 40/104 (38%), Gaps = 11/104 (10%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK----ITLPEAPAGV--- 261 GPP HGPPG P + P FPG G + P+ P GV Sbjct: 255 GPPGMHGPPGPVGLPGVGK--------PGVTGFPGPQGPLGKPGPPGEPGPQGPIGVPGV 306 Query: 262 ---SGLPNVAVNRHIPAREILTRFP-FGGCA*SRYLPGLPRPLG 381 GLP V P ++ + P F G + LPGLP P G Sbjct: 307 QGPPGLPGVGK----PGQDGIPGQPGFPGGKGEQGLPGLPGPPG 346
>COL34_CAEEL (P34687) Cuticle collagen 34 (Abnormal ray morphology protein 4)| Length = 299 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPF-PGLAGR*AEKITLPEAPAGVSGLP 273 GPP G PGA TP + + L P EP PG AG P+ P G G P Sbjct: 187 GPPGPPGAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAG--------PQGPPGSPGQP 236
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 30.0 bits (66), Expect = 1.4 Identities = 24/86 (27%), Positives = 31/86 (36%) Frame = +1 Query: 118 HGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVAVNRHI 297 H PPG R P V G G AG LPE PAG L + + Sbjct: 1856 HAPPGT-RKPHTVVVQMGE----------GTAG--TVTTLLPEEPAGALDLTGMRPESQL 1902 Query: 298 PAREILTRFPFGGCA*SRYLPGLPRP 375 +++ +FPFG + P P Sbjct: 1903 ACCDMVYKFPFGSSCTGTFHPAPSAP 1928
>LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1842 Score = 29.6 bits (65), Expect = 1.8 Identities = 28/83 (33%), Positives = 31/83 (37%), Gaps = 8/83 (9%) Frame = +1 Query: 70 GYEYDRA*TVLGPPDFH----GPPGA----HRTPRDVRCSSGHWTLPPAEPFPGLAGR*A 225 GYEY GP D H GP G + P D P FP AGR Sbjct: 1646 GYEYSP-----GPDDLHYSLYGPDGVPFYNYLGPEDAI---------PEPLFPSTAGRPG 1691 Query: 226 EKITLPEAPAGVSGLPNVAVNRH 294 ++I LPE P S L V H Sbjct: 1692 DRIPLPEPPLQPSELQPHYVASH 1714
>CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor| Length = 1707 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSG 171 GPP F GPPG TP C +G Sbjct: 637 GPPGFPGPPGPPGTPGQRDCDTG 659
>GUNB_FUSOX (P46236) Putative endoglucanase type B precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) Length = 462 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -2 Query: 211 PTLETVQPEVGSSGRKSTARRAVSGAPPAAHENP 110 P+ T + G +TA +V+ APPAA +NP Sbjct: 74 PSSTTATKTTATGGSSTTAGGSVTSAPPAASDNP 107
>CO8A1_MOUSE (Q00780) Collagen alpha-1(VIII) chain precursor| Length = 743 Score = 29.6 bits (65), Expect = 1.8 Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 9/102 (8%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPE-APAGVSGLPNV 279 GPP HGPPG P + P FPG G + E P G+ G+P V Sbjct: 255 GPPGMHGPPGPVGLPGVGK--------PGVTGFPGPQGPLGKPGPPGEPGPQGLIGVPGV 306 Query: 280 -------AVNRHIPAREILTRFP-FGGCA*SRYLPGLPRPLG 381 V + P ++ + P F G + LPGLP P G Sbjct: 307 QGPPGMPGVGK--PGQDGIPGQPGFPGGKGEQGLPGLPGPPG 346
>DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) (mDIA1) (p140mDIA) Length = 1255 Score = 29.6 bits (65), Expect = 1.8 Identities = 23/76 (30%), Positives = 28/76 (36%) Frame = +1 Query: 106 PPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVAV 285 PP PG+ P G PP PFPG G +P P G+ P Sbjct: 684 PPPPPPLPGSVGVPPPPPLPGGPGLPPPPPPFPGAPG-------IPPPPPGMGVPPPPPF 736 Query: 286 NRHIPAREILTRFPFG 333 +PA +L PFG Sbjct: 737 GFGVPAAPVL---PFG 749
>SFTPA_MACMU (Q9TUC5) Pulmonary surfactant-associated protein A (SP-A) (PSP-A)| (PSAP) (Fragment) Length = 165 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/51 (37%), Positives = 21/51 (41%) Frame = +1 Query: 121 GPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLP 273 GPPG P D+ C G+ LP A PG G E G GLP Sbjct: 7 GPPGPMGPPGDMPCFPGNDGLPGAPGIPGECGEKGE-----PGERGPPGLP 52
>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor| Length = 1685 Score = 29.6 bits (65), Expect = 1.8 Identities = 20/57 (35%), Positives = 22/57 (38%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLP 273 G P FHG PG P PP P P L G + P+ P G GLP Sbjct: 1223 GEPGFHGFPGVQGPPG-----------PPGSPGPALEG--PKGNPGPQGPPGRPGLP 1266 Score = 27.7 bits (60), Expect = 6.8 Identities = 31/108 (28%), Positives = 39/108 (36%), Gaps = 12/108 (11%) Frame = +1 Query: 97 VLGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEP-FPGLAGR*AEK----ITLPEAPA-- 255 + GPP GPPGA PP P FPG G+ ++ I++P P Sbjct: 378 IQGPPGLPGPPGAAVMG------------PPGPPGFPGERGQKGDEGPPGISIPGPPGLD 425 Query: 256 ---GVSGLPNV--AVNRHIPAREILTRFPFGGCA*SRYLPGLPRPLGS 384 G GLP HIP + + PG P P GS Sbjct: 426 GQPGAPGLPGPPGPAGPHIPPSDEICE------------PGPPGPPGS 461
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.3 bits (64), Expect = 2.3 Identities = 32/106 (30%), Positives = 41/106 (38%), Gaps = 4/106 (3%) Frame = +1 Query: 97 VLGPPDFHGPPGAHRTPRD--VRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGL 270 V GPP GP GA+ P + + +G P E PGL G E+ G +GL Sbjct: 676 VQGPPGPQGPRGANGAPGNDGAKGDAGAPGAPGNEGPPGLEGMPGER--------GAAGL 727 Query: 271 PNVAVNRHIPAREILTRFPFG--GCA*SRYLPGLPRPLGSAYPCAS 402 P +R P P G G L GL P+G P + Sbjct: 728 PGAKGDRGDPG-------PKGADGAPGKDGLRGLTGPIGPPGPAGA 766 Score = 28.1 bits (61), Expect = 5.2 Identities = 21/62 (33%), Positives = 23/62 (37%), Gaps = 4/62 (6%) Frame = +1 Query: 100 LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK----ITLPEAPAGVSG 267 +GPP GPPG +G P AE PG G K T P P G G Sbjct: 989 MGPPGLAGPPG----------EAGREGAPGAEGAPGRDGAAGPKGDRGETGPAGPPGAPG 1038 Query: 268 LP 273 P Sbjct: 1039 AP 1040
>COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-3) (Protein| dumpy-15) Length = 296 Score = 29.3 bits (64), Expect = 2.3 Identities = 23/67 (34%), Positives = 27/67 (40%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVA 282 GPP GPPGA P + +G P + PG G P PAG +G P A Sbjct: 148 GPPGPPGPPGAPGDPGE----AGTPGRPGTDAAPGSPGPRG-----PPGPAGEAGAPGPA 198 Query: 283 VNRHIPA 303 PA Sbjct: 199 GEPGTPA 205
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 29.3 bits (64), Expect = 2.3 Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 4/62 (6%) Frame = +1 Query: 100 LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK----ITLPEAPAGVSG 267 +GPP GPPG SG P AE PG G K T P P G G Sbjct: 1000 MGPPGLAGPPG----------ESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPG 1049 Query: 268 LP 273 P Sbjct: 1050 AP 1051
>TIF1B_MOUSE (Q62318) Transcription intermediary factor 1-beta (TIF1-beta)| (Tripartite motif protein 28) (KRAB-A-interacting protein) (KRIP-1) Length = 834 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 5/50 (10%) Frame = -2 Query: 190 PEVGSSGRKSTARRAVSGAPPAAHENPEDR---VPFT--PGRTHNRIRSP 56 P G + K A GAPPAA E PE + +P T PG R+ SP Sbjct: 546 PLPGMAIVKEEETEAAIGAPPAAPEGPETKPVLMPLTEGPGAEGPRLASP 595
>ADA11_MOUSE (Q9R1V4) ADAM 11 precursor (A disintegrin and metalloproteinase| domain 11) (Metalloproteinase-like, disintegrin-like, and cysteine-rich protein) (MDC) Length = 773 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = -1 Query: 335 PPKGNRVKISRAGM-WRLTATLGSPETPAGASGRVIFSA*RPANPGNGSAGGRVQWPE 165 PP G R + WR +A +GSPE+P G+ P+ S+GG V+ P+ Sbjct: 19 PPPGLGALGPRGALHWRSSAHVGSPESPEGS------EVTEPSRLVRQSSGGEVRKPQ 70
>DNAE2_BRUSU (Q8G381) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 1077 Score = 28.9 bits (63), Expect = 3.1 Identities = 24/70 (34%), Positives = 28/70 (40%) Frame = +1 Query: 106 PPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVAV 285 PPD P A R + + G L P G GR AE+I A AGV + V Sbjct: 131 PPDEDEPDFAARLTEIAQAAPGSVWLALTMPHQGQDGRRAERIARFAAQAGVPLIATNDV 190 Query: 286 NRHIPAREIL 315 H P R L Sbjct: 191 LYHHPDRRPL 200
>DNAE2_BRUME (Q8YEK2) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 1077 Score = 28.9 bits (63), Expect = 3.1 Identities = 24/70 (34%), Positives = 28/70 (40%) Frame = +1 Query: 106 PPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVAV 285 PPD P A R + + G L P G GR AE+I A AGV + V Sbjct: 131 PPDEDEPDFAARLTEIAQAAPGSVWLALTMPHQGQDGRRAERIARFAAQAGVPLIATNDV 190 Query: 286 NRHIPAREIL 315 H P R L Sbjct: 191 LYHHPDRRPL 200
>DNAE2_BRUAB (Q57FU7) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 1077 Score = 28.9 bits (63), Expect = 3.1 Identities = 24/70 (34%), Positives = 28/70 (40%) Frame = +1 Query: 106 PPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVAV 285 PPD P A R + + G L P G GR AE+I A AGV + V Sbjct: 131 PPDEDEPDFAARLTEIAQAAPGSVWLALTMPHQGQDGRRAERIARFAAQAGVPLIATNDV 190 Query: 286 NRHIPAREIL 315 H P R L Sbjct: 191 LYHHPDRRPL 200
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.9 bits (63), Expect = 3.1 Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 4/62 (6%) Frame = +1 Query: 100 LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK----ITLPEAPAGVSG 267 +GPP GPPG SG P AE PG G K T P P G G Sbjct: 989 MGPPGLAGPPG----------ESGREGSPGAEGSPGRDGAPGAKGDRGETGPAGPPGAPG 1038 Query: 268 LP 273 P Sbjct: 1039 AP 1040 Score = 28.1 bits (61), Expect = 5.2 Identities = 25/70 (35%), Positives = 26/70 (37%), Gaps = 10/70 (14%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFP----------GLAGR*AEKITLPEAP 252 GP F GPPG P SG PP P P G GR E+ P P Sbjct: 186 GPQGFQGPPGEPGEPG----GSGPMG-PPGPPGPPGKNGDDGEAGKPGRPGER--GPPGP 238 Query: 253 AGVSGLPNVA 282 G GLP A Sbjct: 239 QGARGLPGTA 248
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.9 bits (63), Expect = 3.1 Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 4/62 (6%) Frame = +1 Query: 100 LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK----ITLPEAPAGVSG 267 +GPP GPPG SG P AE PG G K T P P G G Sbjct: 989 MGPPGLAGPPG----------ESGREGSPGAEGSPGRDGAPGAKGDRGETGPAGPPGAPG 1038 Query: 268 LP 273 P Sbjct: 1039 AP 1040
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 28.9 bits (63), Expect = 3.1 Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 4/62 (6%) Frame = +1 Query: 100 LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK----ITLPEAPAGVSG 267 +GPP GPPG SG P AE PG G K T P P G G Sbjct: 996 MGPPGLAGPPG----------ESGREGSPGAEGSPGRDGSPGPKGDRGETGPAGPPGAPG 1045 Query: 268 LP 273 P Sbjct: 1046 AP 1047
>COBA1_BOVIN (Q28083) Collagen alpha-1(XI) chain precursor (Fragment)| Length = 911 Score = 28.9 bits (63), Expect = 3.1 Identities = 29/97 (29%), Positives = 37/97 (38%), Gaps = 2/97 (2%) Frame = +1 Query: 97 VLGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPN 276 ++GPP GP G P + R G LP A+ PG G + LP G S Sbjct: 219 LMGPPGLQGPTGPPGDPGE-RGPPGRPGLPGADGLPGPPG---TMLVLPFRYGGDSSKGP 274 Query: 277 VAVNRHIPAREIL--TRFPFGGCA*SRYLPGLPRPLG 381 + A+ IL R G L G P P+G Sbjct: 275 TVSAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVG 311
>SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 28.9 bits (63), Expect = 3.1 Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 4/102 (3%) Frame = +1 Query: 106 PPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVAV 285 PP PP R+P R G PP+ PG+A R +I P++P G + N+ Sbjct: 1119 PPQRPPPPSGARSPAPARKEFGGVGAPPS---PGVARR---EIEAPKSP-GTARKDNIGR 1171 Query: 286 NRHIPAREILTRFPFGGCA*SRYLPG----LPRPLGSAYPCA 399 N+ P + P G A +P + P A CA Sbjct: 1172 NQPSPQAGLAGPGPAGYGAARPTIPARAGVISAPQSQARVCA 1213
>DIAP1_HUMAN (O60610) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) Length = 1248 Score = 28.9 bits (63), Expect = 3.1 Identities = 23/76 (30%), Positives = 29/76 (38%) Frame = +1 Query: 106 PPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVAV 285 PP G G P + G +PP PFPG G +P P G+ P Sbjct: 683 PPPLPGEAGMPPPPPPLPGGPG---IPPPPPFPGGPG-------IPPPPPGMGMPPPPPF 732 Query: 286 NRHIPAREILTRFPFG 333 +PA +L PFG Sbjct: 733 GFGVPAAPVL---PFG 745
>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor| Length = 1806 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = +1 Query: 97 VLGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAG 216 ++GPP GP G P D R G LP A+ PG G Sbjct: 452 IMGPPGLQGPTGPPGDPGD-RGPPGRPGLPGADGLPGPPG 490
>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)| Length = 779 Score = 28.5 bits (62), Expect = 4.0 Identities = 22/59 (37%), Positives = 23/59 (38%), Gaps = 1/59 (1%) Frame = +1 Query: 100 LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPE-APAGVSGLP 273 +GPP GPPG SG P AE PG G K E PAG G P Sbjct: 562 MGPPGLAGPPG----------ESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGAPGPP 610
>SFTA1_HUMAN (Q8IWL2) Pulmonary surfactant-associated protein A1 precursor| (SP-A1) (SP-A) (PSP-A) (PSPA) (Alveolar proteinosis protein) (35 kDa pulmonary surfactant-associated protein) Length = 248 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/51 (35%), Positives = 21/51 (41%) Frame = +1 Query: 121 GPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLP 273 GPPG P ++ C G+ LP A PG G E G GLP Sbjct: 55 GPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGE-----PGERGPPGLP 100
>MAGD1_HUMAN (Q9Y5V3) Melanoma-associated antigen D1 (MAGE-D1 antigen)| (Neurotrophin receptor-interacting MAGE homolog) (MAGE tumor antigen CCF) Length = 778 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/34 (41%), Positives = 15/34 (44%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFP 204 GPPD+ GPP P W LPP P P Sbjct: 394 GPPDWQGPPDWPLPP--------DWPLPPDWPLP 419
>YDEQ_BACSU (P96674) Putative NAD(P)H oxidoreductase ydeQ (EC 1.6.99.-)| Length = 197 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/51 (35%), Positives = 23/51 (45%) Frame = -1 Query: 341 AHPPKGNRVKISRAGMWRLTATLGSPETPAGASGRVIFSA*RPANPGNGSA 189 AH P GN++K W ++GSPE A G +FS P SA Sbjct: 91 AHGPGGNKLKGKE---WVTAMSIGSPEHSYQAGGYNLFSISELTKPFQASA 138
>MDC1_MACMU (Q5TM68) Mediator of DNA damage checkpoint protein 1| Length = 2173 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +2 Query: 179 PYLRLNRFQGWQAVKQKR*LFPRPPPASPDFLTSPSTAT 295 P R +R Q W AV+ L P PASP L P+ A+ Sbjct: 1832 PKSRPSRNQRWGAVRADESLTAIPEPASPQLLDIPTHAS 1870
>MAGD1_PIG (Q6ITT4) Melanoma-associated antigen D1 (MAGE-D1 antigen)| Length = 784 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/34 (41%), Positives = 15/34 (44%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFP 204 GPPD+ GPP P W LPP P P Sbjct: 400 GPPDWQGPPDWPLPP--------DWPLPPDWPLP 425
>EMID2_HUMAN (Q96A83) Collagen alpha-1(XXVI) chain precursor (EMI| domain-containing protein 2) (Emu2 protein) (Emilin and multimerin domain-containing protein 2) Length = 441 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPE 246 GPP GPPG TP + T+ P+ PG+ G EK E Sbjct: 314 GPPGPRGPPGPPGTPGSQGLAGERGTVGPSGE-PGVKGEEGEKAATAE 360
>COEA1_MOUSE (Q80X19) Collagen alpha-1(XIV) chain precursor| Length = 1797 Score = 28.5 bits (62), Expect = 4.0 Identities = 35/105 (33%), Positives = 41/105 (39%), Gaps = 5/105 (4%) Frame = +1 Query: 94 TVLGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEP-FPGLAGR*AEKITLPEAPAGVSGL 270 T+ GPP G PG+ TP + PP P FPG AG +P P G GL Sbjct: 1652 TIQGPPGEPGRPGSPGTPGEQG--------PPGTPGFPGNAG-------VPGTP-GERGL 1695 Query: 271 PNVAVNRHIPAREILTRFPFG----GCA*SRYLPGLPRPLGSAYP 393 V + P I T+ P G PG P P GS P Sbjct: 1696 TGVKGEKGNPG--IGTQGPRGPPGPAGPSGESRPGSPGPPGSPGP 1738
>COAT_PLRV (P10470) Coat protein| Length = 208 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -3 Query: 135 RPRRPMKIRRTEYRSRPVVLITASG 61 R RR +RR R +PVV++TASG Sbjct: 18 RRRRRQSLRRRANRVQPVVMVTASG 42
>AP2_ARATH (P47927) Floral homeotic protein APETALA2| Length = 432 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/59 (32%), Positives = 27/59 (45%) Frame = -3 Query: 264 GDAGGGLGKSYLFCLTACQPWKRFSRR*GPVAGRAPHVARCPVRPRRPMKIRRTEYRSR 88 G G +++ F + CQ G AG+A +VA V P +P+K R RSR Sbjct: 74 GGVASGFPRAHWFGVKFCQS----DLATGSSAGKATNVAAAVVEPAQPLKKSRRGPRSR 128
>OC17_CHICK (Q9PRS8) Ovocleidin-17 (OC-17)| Length = 142 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 5/57 (8%) Frame = -1 Query: 287 LTATLGSPETPAGASGRVIFSA*RPANP-----GNGSAGGRVQWPEEHRTSRGVRCA 132 L A+ G + GA GRV RPA +G+A W + RG RCA Sbjct: 58 LNASRGGDGSGEGADGRVWIGLHRPAGSRSWRWSDGTAPRFASWHRTAKARRGGRCA 114
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = -3 Query: 225 CLTACQPWKRFSRR*GPVAGRAPHVARCPVRPR 127 CL CQ + S R GP R P R P PR Sbjct: 18 CLATCQSLQMGSVRKGPTGDRGPRGQRGPAGPR 50 Score = 27.3 bits (59), Expect = 8.9 Identities = 21/55 (38%), Positives = 23/55 (41%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSG 267 GPP F G PG T +V G LP PG AG E+ P G SG Sbjct: 556 GPPGFQGLPGPSGTAGEVG-KPGERGLPGEFGLPGPAGPRGER-----GPPGESG 604
>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 28.5 bits (62), Expect = 4.0 Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEA-PAGVSG 267 GPP F G PG T +V G LP PG AG E+ T E+ AG SG Sbjct: 556 GPPGFQGLPGPSGTTGEVG-KPGERGLPGEFGLPGPAGPRGERGTPGESGAAGPSG 610 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = -3 Query: 225 CLTACQPWKRFSRR*GPVAGRAPHVARCPVRPR 127 CL CQ + S R GP R P R P PR Sbjct: 18 CLATCQYLQSGSVRKGPTGDRGPRGQRGPAGPR 50
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 28.5 bits (62), Expect = 4.0 Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 5/88 (5%) Frame = +1 Query: 127 PGA--HR-TPRDVRCSSGHWTLPPAEPFPGLAGR*AEKIT--LPEAPAGVSGLPNVAVNR 291 PGA HR TP ++R + T P + A +T LPE PAG L + Sbjct: 1829 PGAEPHRATPAELRAHALPGTRKPHTVVVQMGEGAAGTVTTLLPEEPAGALDLTGMRPES 1888 Query: 292 HIPAREILTRFPFGGCA*SRYLPGLPRP 375 + ++ +FPFG + P P Sbjct: 1889 RLACCDMAYKFPFGSSCTGTFHPAPSAP 1916
>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-2) Length = 1558 Score = 28.1 bits (61), Expect = 5.2 Identities = 24/87 (27%), Positives = 36/87 (41%) Frame = +1 Query: 118 HGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVAVNRHI 297 H PP AH P + S PA+P PGL ++ + P A +GL + Sbjct: 970 HHPPSAHPPPLQLMPQSQPLPSSPAQP-PGLTQ--SQSLPPPAASHPTTGL------HQV 1020 Query: 298 PAREILTRFPFGGCA*SRYLPGLPRPL 378 P++ + PF +PG P P+ Sbjct: 1021 PSQSPFPQHPF--------VPGGPPPI 1039
>COHA1_CHICK (Q90584) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) (Fragment) Length = 1146 Score = 28.1 bits (61), Expect = 5.2 Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 3/102 (2%) Frame = +1 Query: 97 VLGPPDFHGPPGAHRTPRDVRCSSG--HWTLPPAEP-FPGLAGR*AEKITLPEAPAGVSG 267 V GPP GPPG P+ + G +T P EP PG + +T+ + P G G Sbjct: 515 VSGPPGPPGPPG----PKGDQGEPGPRGFTGEPGEPGLPGFSSH-GGTVTM-QGPPGPPG 568 Query: 268 LPNVAVNRHIPAREILTRFPFGGCA*SRYLPGLPRPLGSAYP 393 P + +P + GG SR + G P P G P Sbjct: 569 PPGPKGDAGVPGAPGIPGTSRGG---SRQIQGPPGPPGPPGP 607 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/60 (31%), Positives = 24/60 (40%) Frame = +1 Query: 94 TVLGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLP 273 T+ GPP GPPG G +P A PG + + +I P P G G P Sbjct: 559 TMQGPPGPPGPPG----------PKGDAGVPGAPGIPGTSRGGSRQIQGPPGPPGPPGPP 608
>BAI3_MOUSE (Q80ZF8) Brain-specific angiogenesis inhibitor 3 precursor| Length = 1522 Score = 28.1 bits (61), Expect = 5.2 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = -2 Query: 178 SSGRKSTARRAVSGAPPAAHENPEDRVPFTPGRTHNRIRSPR*TASGQWNNVGKGS 11 S+G + +R+ + AAH E R P+ R +P TA+GQWN G S Sbjct: 417 SNGTQQRSRQCTA----AAHGGSECRGPWAESR---ECYNPECTANGQWNQWGHWS 465
>BAI3_HUMAN (O60242) Brain-specific angiogenesis inhibitor 3 precursor| Length = 1522 Score = 28.1 bits (61), Expect = 5.2 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = -2 Query: 178 SSGRKSTARRAVSGAPPAAHENPEDRVPFTPGRTHNRIRSPR*TASGQWNNVGKGS 11 S+G + +R+ + AAH E R P+ R +P TA+GQWN G S Sbjct: 417 SNGTQQRSRQCTA----AAHGGSECRGPWAESR---ECYNPECTANGQWNQWGHWS 465
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/35 (37%), Positives = 13/35 (37%) Frame = +1 Query: 106 PPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGL 210 PP HGPP P G W PP P L Sbjct: 260 PPPGHGPPPPQHQPSPYGGQQGGWAPPPRPYSPQL 294
>DPO3B_MYCPA (Q9L7L6) DNA polymerase III beta subunit (EC 2.7.7.7)| Length = 399 Score = 28.1 bits (61), Expect = 5.2 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 7/51 (13%) Frame = -3 Query: 360 RQIARSRASPERESG*DFPSRDVA------VDG-DVRKSGDAGGGLGKSYL 229 R++ S ASP+ E+ P++ +A +DG DVR S AG G+GK L Sbjct: 189 RELTWSAASPDIEAAVLVPAKTLAEAARTGIDGSDVRLSLGAGAGVGKDGL 239
>IF2_MYCTU (P65131) Translation initiation factor IF-2| Length = 900 Score = 28.1 bits (61), Expect = 5.2 Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Frame = -1 Query: 332 PKGNRVKISRAGMWRLTATLGS-PETPAGASGRVIFSA*RPANPGNGSAGGRVQWPEEHR 156 P R +R G+ R A+ GS P P GA G RP PG GGR P R Sbjct: 170 PPAPRPGTARPGVPRPGASPGSMPPRPGGAVGGA-----RPPRPGAPRPGGRPGAPGAGR 224 Query: 155 TSRG 144 + G Sbjct: 225 SDAG 228
>IF2_MYCBO (P65132) Translation initiation factor IF-2| Length = 900 Score = 28.1 bits (61), Expect = 5.2 Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Frame = -1 Query: 332 PKGNRVKISRAGMWRLTATLGS-PETPAGASGRVIFSA*RPANPGNGSAGGRVQWPEEHR 156 P R +R G+ R A+ GS P P GA G RP PG GGR P R Sbjct: 170 PPAPRPGTARPGVPRPGASPGSMPPRPGGAVGGA-----RPPRPGAPRPGGRPGAPGAGR 224 Query: 155 TSRG 144 + G Sbjct: 225 SDAG 228
>YHS4_CAEEL (O18303) Hypothetical protein ZK849.4 in chromosome I| Length = 602 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = +1 Query: 190 AEPFPGLAGR*AEKITLPEAPAGVSGLPNVAVNRHIPAREILTRF 324 A P PG R A + +P AP G + + +V+ + AR + R+ Sbjct: 173 ALPMPGAPERPAVALPMPGAPEGPAAIQQPSVDVKLTARRTIIRY 217
>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor| Length = 1804 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = +1 Query: 97 VLGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAG 216 ++GPP GP G P D R G LP A+ PG G Sbjct: 450 LMGPPGLQGPSGLPGDPGD-RGPPGRPGLPGADGLPGPPG 488
>MAVS_MOUSE (Q8VCF0) Mitochondrial antiviral signaling protein (Interferon-beta| promoter stimulator protein 1) (IPS-1) (Virus-induced signaling adapter) (CARD adapter inducing interferon-beta) (Cardif) Length = 503 Score = 28.1 bits (61), Expect = 5.2 Identities = 19/64 (29%), Positives = 26/64 (40%) Frame = +1 Query: 202 PGLAGR*AEKITLPEAPAGVSGLPNVAVNRHIPAREILTRFPFGGCA*SRYLPGLPRPLG 381 PG + R E + LP+ PA VSG A +IP + R P P+P+ Sbjct: 98 PGTSLRSLEPLQLPDFPAAVSGPSAFAPGHNIPDHGL------------RETPSCPKPVQ 145 Query: 382 SAYP 393 P Sbjct: 146 DTQP 149
>ZN694_HUMAN (Q63HK3) Zinc finger protein 694| Length = 967 Score = 28.1 bits (61), Expect = 5.2 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +1 Query: 97 VLGPPDFHGPPGAHRTPRDVRCSSG 171 ++ P+F GPPG ++P D SG Sbjct: 643 IVQEPEFQGPPGLLQSPNDFEIGSG 667
>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor| Length = 684 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = +2 Query: 122 GRRGRTGHRATCGALPATGP 181 G RG GHR + GAL GP Sbjct: 376 GERGEAGHRGSAGALGPQGP 395 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/57 (33%), Positives = 22/57 (38%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLP 273 GPP GPPG P G P PGL G + +T + P G G P Sbjct: 53 GPPGLPGPPGPKGAP-------GKPGKPGEAGLPGLPG--VDGLTGRDGPPGPKGAP 100
>SFTPA_SHEEP (Q9TT06) Pulmonary surfactant-associated protein A precursor (SP-A)| (PSP-A) (PSAP) Length = 248 Score = 27.7 bits (60), Expect = 6.8 Identities = 28/92 (30%), Positives = 31/92 (33%), Gaps = 6/92 (6%) Frame = +1 Query: 70 GYEYDRA*TVLGPPDFHGPPGAHRTP-RDVRCSSGHWTLPPAE-----PFPGLAGR*AEK 231 G E D LG P G PG+H P RD R PP PGL GR Sbjct: 17 GLECDTKEVCLGSPGIPGTPGSHGLPGRDGRDGIKGDPGPPGPMGPPGGMPGLPGR---- 72 Query: 232 ITLPEAPAGVSGLPNVAVNRHIPAREILTRFP 327 + G GLP + P FP Sbjct: 73 ----DGMTGAPGLPGERGEKGEPGERGPPGFP 100
>SFTA2_HUMAN (Q8IWL1) Pulmonary surfactant-associated protein A2 precursor| (SP-A2) (SP-A) (PSP-A) (PSPA) (Alveolar proteinosis protein) (35 kDa pulmonary surfactant-associated protein) Length = 248 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/51 (39%), Positives = 23/51 (45%) Frame = +1 Query: 121 GPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLP 273 GPPG P + C G+ LP A PG+ G EK E G GLP Sbjct: 55 GPPGPMGPPGETPCPPGNNGLPGA---PGVPGERGEKGEAGE--RGPPGLP 100
>MDC1_HUMAN (Q14676) Mediator of DNA damage checkpoint protein 1 (Nuclear factor| with BRCT domains 1) Length = 2089 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +2 Query: 179 PYLRLNRFQGWQAVKQKR*LFPRPPPASPDFLTSPSTAT 295 P + +R Q W AV+ L P PASP L +P A+ Sbjct: 1748 PKSQASRNQRWGAVRAAESLTAIPEPASPQLLETPIHAS 1786
>CO4A4_RABIT (P55787) Collagen alpha-4(IV) chain (Fragment)| Length = 623 Score = 27.7 bits (60), Expect = 6.8 Identities = 31/104 (29%), Positives = 34/104 (32%), Gaps = 11/104 (10%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVA 282 GPP GPPG P GH FPGL G P G+ GLP Sbjct: 234 GPPGPPGPPGCQGVPG----CDGHDGQKGPMGFPGLQG-----------PHGLPGLPGEK 278 Query: 283 VNRHIPAREILTRFP-----------FGGCA*SRYLPGLPRPLG 381 P R+ T P C LPG+P P G Sbjct: 279 GLPGSPGRKGPTGPPGYRGEPGPPADEDSCPRIPGLPGVPGPRG 322
>OTO1_ONCKE (P83371) Otolin-1 precursor| Length = 508 Score = 27.7 bits (60), Expect = 6.8 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Frame = +1 Query: 97 VLGPPDFHGPPGAHRTPRDV--RCSSGHWTLPPAEPFPGLAGR*AEKITL-PEAPAGVSG 267 ++GPP G PGA D + G +P A PG+ G+ K L P+ G +G Sbjct: 172 LMGPPGLDGMPGATGLEGDKGDKGDQGDTGMPGA---PGILGKEGPKGDLGPKGEKGETG 228 Query: 268 LPNV 279 LP + Sbjct: 229 LPGL 232
>DNB2_ADE40 (P11806) Early E2A DNA-binding protein| Length = 473 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/53 (28%), Positives = 26/53 (49%) Frame = -2 Query: 211 PTLETVQPEVGSSGRKSTARRAVSGAPPAAHENPEDRVPFTPGRTHNRIRSPR 53 P ++ VQ +SG++ R G PP + EN E+ P T + + +P+ Sbjct: 70 PGVQVVQK---ASGKRYVRRLEPKGVPPPSEENNEEEEPSTSKAVTSVVLNPQ 119
>COFA1_HUMAN (P39059) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV) (Restin) (Related to endostatin)] Length = 1388 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Frame = +1 Query: 184 PPAEPF-PGLAGR*AEKITLPEAPAGVSGLP 273 PP P PG AG+ E + P+ P G GLP Sbjct: 1054 PPGLPGNPGPAGQKGETVVGPQGPPGAPGLP 1084
>MDC1_PANTR (Q7YR40) Mediator of DNA damage checkpoint protein 1| Length = 2171 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +2 Query: 179 PYLRLNRFQGWQAVKQKR*LFPRPPPASPDFLTSPSTAT 295 P + +R Q W AV+ L P PASP L +P A+ Sbjct: 1830 PKSQASRNQRWGAVRAAESLTAIPEPASPQLLETPIHAS 1868
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/64 (31%), Positives = 23/64 (35%), Gaps = 2/64 (3%) Frame = +1 Query: 97 VLGPPDFHGPPGAHRTPRDVRCSSGHWTLPPA--EPFPGLAGR*AEKITLPEAPAGVSGL 270 + GP GP G H P + GH + P PG G P P G GL Sbjct: 1040 ITGPAGPRGPAGPHGPPGKDGRAGGHGAIGPVGHRGSPGHLG--------PAGPPGSPGL 1091 Query: 271 PNVA 282 P A Sbjct: 1092 PGPA 1095
>UL49_HHV11 (P10233) Tegument protein UL49| Length = 301 Score = 27.7 bits (60), Expect = 6.8 Identities = 23/86 (26%), Positives = 31/86 (36%) Frame = +1 Query: 124 PPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVAVNRHIPA 303 P A R PR R ++ P AE G E LP+APA + PA Sbjct: 115 PTTAPRAPRTQRVATKAPAAPAAETTRGRKSAQPESAALPDAPASTA-----PTRSKTPA 169 Query: 304 REILTRFPFGGCA*SRYLPGLPRPLG 381 + + + F + P PR G Sbjct: 170 QGLARKLHFSTAPPNPDAPWTPRVAG 195
>RL13_ARCFU (O29137) 50S ribosomal protein L13P| Length = 156 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +2 Query: 41 RGCSPWRPDAVMSTTGRERYSVLRIFMG 124 RG PW+ S+ GR+ Y LR+FMG Sbjct: 92 RGMLPWK-----SSRGRDAYRRLRVFMG 114
>YQ35_CAEEL (Q09456) Putative cuticle collagen C09G5.5| Length = 317 Score = 27.7 bits (60), Expect = 6.8 Identities = 24/64 (37%), Positives = 25/64 (39%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVA 282 GPP GPPG + P G P A G G A P A V NVA Sbjct: 232 GPP---GPPGPNGQPGH----PGQDGQPGAPGNDGAPGSDAAYCPCPARSAAVFRHRNVA 284 Query: 283 VNRH 294 VNRH Sbjct: 285 VNRH 288
>5E5_RAT (Q63003) 5E5 antigen| Length = 825 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/44 (27%), Positives = 21/44 (47%) Frame = -2 Query: 187 EVGSSGRKSTARRAVSGAPPAAHENPEDRVPFTPGRTHNRIRSP 56 +V + GR++ +R A DR+P PG ++ R+ P Sbjct: 633 QVSTRGRRARGQRTGEEAQDGLLPRGRDRLPLRPGDSNQRVERP 676
>FBLI1_HUMAN (Q8WUP2) Filamin-binding LIM protein 1 (Filamin-binding LIM protein| 1) (FBLP-1) (Mitogen-inducible 2-interacting protein) (MIG2-interacting protein) (Migfilin) Length = 373 Score = 27.7 bits (60), Expect = 6.8 Identities = 29/102 (28%), Positives = 33/102 (32%), Gaps = 10/102 (9%) Frame = +2 Query: 38 ARGCSPWRPDAVMSTTGRERYSVLRIFMGRRGRTGHRATCGALPATGPYLRLNRFQGW-- 211 AR PW A M T G GR T G AT P + F G Sbjct: 37 ARRGRPWEAPAPMKTPEA----------GLAGRPSPWTTPGRAAATVPAAPMQLFNGGCP 86 Query: 212 --------QAVKQKR*LFPRPPPASPDFLTSPSTATSRLGKS 313 + V L P PPP P L S A + +G S Sbjct: 87 PPPPVLDGEDVLPDLDLLPPPPPPPPVLLPSEEEAPAPMGAS 128
>AMPH_HUMAN (P49418) Amphiphysin| Length = 695 Score = 27.3 bits (59), Expect = 8.9 Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 9/103 (8%) Frame = +1 Query: 43 RLFTLET*CGYEY-DRA*TVLGPPDFHGP--------PGAHRTPRDVRCSSGHWTLPPAE 195 +L+ + T G ++ D+A T+ G P GP P +P +S + TL PA Sbjct: 226 KLYEVMTKLGDQHADKAFTIQGAPSDSGPLRIAKTPSPPEEPSPLPSPTASPNHTLAPAS 285 Query: 196 PFPGLAGR*AEKITLPEAPAGVSGLPNVAVNRHIPAREILTRF 324 P P ++ P P LP V + + I++ F Sbjct: 286 PAPARPRSPSQTRKGPPVPP----LPKVTPTKELQQENIISFF 324
>STF1_HORSE (Q9GKL2) Steroidogenic factor 1 (STF-1) (SF-1)| Length = 461 Score = 27.3 bits (59), Expect = 8.9 Identities = 24/74 (32%), Positives = 32/74 (43%) Frame = +1 Query: 106 PPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVAV 285 PPD+ PPG H P +SG PPA P G G A + +P ++G A Sbjct: 135 PPDYMLPPGLH-VPEPKGLASG----PPAGPL-GDFGAPALPMAVPSTNGPLAGYLYPA- 187 Query: 286 NRHIPAREILTRFP 327 P R I + +P Sbjct: 188 ---FPGRAIKSEYP 198
>AGI_URTDI (P11218) Lectin/endochitinase precursor (EC 3.2.1.14) (Agglutinin)| (UDA) Length = 372 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -2 Query: 397 HMGKPILRDGVTPADSAITRIPRKGI 320 H KP D V A+SA RIP KG+ Sbjct: 287 HDNKPSCHDIVLNANSAANRIPNKGV 312
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 27.3 bits (59), Expect = 8.9 Identities = 33/108 (30%), Positives = 40/108 (37%), Gaps = 14/108 (12%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEP-----FPGLAGR*AEKITLPEAPA---- 255 GPP F G PG ++ PA P PGL+G + P P Sbjct: 253 GPPGFPGAPG---PKGEIGAVGNAGPTGPAGPRGEVGLPGLSG----PVGPPGNPGANGL 305 Query: 256 ----GVSGLPNVAVNRHIPA-REILTRFPFGGCA*SRYLPGLPRPLGS 384 G +GLP VA +P R I G +R L G P P GS Sbjct: 306 TGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGS 353
>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4| (Trithorax homolog 2) Length = 2715 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 2/39 (5%) Frame = +1 Query: 100 LGPPDFHGPPGAHRTPRDV--RCSSGHWTLPPAEPFPGL 210 +G PDF PP R P + R W PP + P L Sbjct: 1901 VGDPDFPAPPRRSRRPSPLAPRPPPSRWASPPLKTSPQL 1939
>PRAX_RAT (Q63425) Periaxin| Length = 1383 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = -2 Query: 190 PEVGSSGRKSTARRAVSGAPPAAHENPEDRVP 95 P G G+++T + V G+P A + P R+P Sbjct: 363 PRFGVRGKEATEAKVVKGSPEAKAKGPRLRMP 394
>PRAX_MOUSE (O55103) Periaxin| Length = 1391 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = -2 Query: 190 PEVGSSGRKSTARRAVSGAPPAAHENPEDRVP 95 P G G+++T + V G+P A + P R+P Sbjct: 363 PRFGIRGKEATEAKVVKGSPEAKAKGPRLRMP 394
>CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 27.3 bits (59), Expect = 8.9 Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 5/76 (6%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEP-FPGLAGR*AEKITLPEAPAG--VSGLP 273 GPP GPPG P+ + SSG T P E PGL G P P G + LP Sbjct: 1531 GPPGLPGPPG----PKGAKGSSGP-TGPKGEAGHPGLPG--------PPGPPGEVIQPLP 1577 Query: 274 NVA--VNRHIPAREIL 315 A R+I A ++L Sbjct: 1578 IQASRTRRNIDASQLL 1593
>CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 27.3 bits (59), Expect = 8.9 Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 5/76 (6%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEP-FPGLAGR*AEKITLPEAPAG--VSGLP 273 GPP GPPG P+ + SSG T P E PGL G P P G + LP Sbjct: 1533 GPPGLPGPPG----PKGAKGSSGP-TGPKGEAGHPGLPG--------PPGPPGEVIQPLP 1579 Query: 274 NVA--VNRHIPAREIL 315 A R+I A ++L Sbjct: 1580 IQASRTRRNIDASQLL 1595
>CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 27.3 bits (59), Expect = 8.9 Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 5/76 (6%) Frame = +1 Query: 103 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEP-FPGLAGR*AEKITLPEAPAG--VSGLP 273 GPP GPPG P+ + SSG T P E PGL G P P G + LP Sbjct: 1533 GPPGLPGPPG----PKGAKGSSGP-TGPKGEAGHPGLPG--------PPGPPGEVIQPLP 1579 Query: 274 NVA--VNRHIPAREIL 315 A R+I A ++L Sbjct: 1580 IQASRTRRNIDASQLL 1595 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,114,024 Number of Sequences: 219361 Number of extensions: 1645625 Number of successful extensions: 5506 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 4754 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5461 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
