ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast40c02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence Length = 102433 Score = 242 bits (122), Expect = 8e-61 Identities = 146/154 (94%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 89143 tactccctccgttcctaaatataagtcttttaagcgatttcactaagggtctacatatgg 89202 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 89203 agcaaaatgattgaatctatactctaaagtatgtctatatacatccgtatgtagtccact 89262 Query: 207 agtgaaatctttacaaagacgtatatttaggaac 240 |||||||||| || |||||| ||||||||||||| Sbjct: 89263 agtgaaatctctagaaagacttatatttaggaac 89296 Score = 236 bits (119), Expect = 5e-59 Identities = 146/155 (94%) Strand = Plus / Minus Query: 86 gtactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacg 145 ||||| |||||||| ||||||||||||||||||||| |||||||||| | |||||||||| Sbjct: 14654 gtacttcctccgttcctaaatataagtcttttaagcaatttcactaaaggtctacatacg 14595 Query: 146 gagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccac 205 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 14594 gagcaaaatgattgaatctatactctaaagtatgtctatatacatccgtatgtagtccac 14535 Query: 206 tagtgaaatctttacaaagacgtatatttaggaac 240 ||||||||||| ||||||||| ||||||||||||| Sbjct: 14534 tagtgaaatctctacaaagacttatatttaggaac 14500 Score = 133 bits (67), Expect = 5e-28 Identities = 134/155 (86%), Gaps = 1/155 (0%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| ||||||||||||||||| || |||| ||||| | |||||||||| Sbjct: 81136 tactccctccgttcctaaatataagtctttttagaaattttactaaagggctacatacgg 81195 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtcca-c 205 |||||||| | ||||||||| | ||||||||| |||||||||||||||||||||||| Sbjct: 81196 agcaaaataaatgaatctatactttaaagtatgcctatatacatccgtatgtagtccatt 81255 Query: 206 tagtgaaatctttacaaagacgtatatttaggaac 240 |||||||| || | |||||| ||||||||||||| Sbjct: 81256 tagtgaaacctcttaaaagacttatatttaggaac 81290 Score = 69.9 bits (35), Expect = 7e-09 Identities = 96/115 (83%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| ||||||||||| | ||| | ||||||||| || |||||||||| Sbjct: 66767 tactccctccgttcctaaatataagaccttttacaaatttcactataga-ctacatacgg 66709 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagt 201 |||||||||| |||| || || | ||| |||| ||| ||||||||||||||||| Sbjct: 66708 agcaaaatgagtgaatttacatcccaaaatatgactacatacatccgtatgtagt 66654 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatataagtcttttaagcgatttcactaagg 134 |||||||| ||||||| ||||||||||||||||| || |||||| |||||| Sbjct: 83462 tagtactctctccgttcctaaatataagtctttttagagatttcgctaagg 83512 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 86 gtactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacg 145 |||||||||||||| |||||||||||||||| || |||||||||| | ||||||||| Sbjct: 89307 gtactccctccgttcctaaatataagtctttctagagatttcactagtggactacatacg 89248 Query: 146 ga 147 || Sbjct: 89247 ga 89246 Score = 60.0 bits (30), Expect = 7e-06 Identities = 128/158 (81%), Gaps = 2/158 (1%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatataagtcttttaagcgatttcacta-aggatctacat 142 ||||||||||| |||| ||||||||||| |||| ||||||| || |||| || ||| Sbjct: 83631 tagtactcccttcgtttttaaatataagttttttttaagatttcattagagga-ctgcat 83573 Query: 143 acggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtc 202 |||||| ||||||| ||||||| | |||| | |||||||| ||||||| ||| || || Sbjct: 83572 acggagtaaaatgagtgaatctacactctagaatatgtctacatacatctatatataatc 83513 Query: 203 cactagtgaaatctttacaaagacgtatatttaggaac 240 | ||| ||||||| || |||||| ||||||||||||| Sbjct: 83512 ccttagcgaaatctctaaaaagacttatatttaggaac 83475 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaa 132 |||| |||||||| |||||||||||||||||||| | ||||||||| Sbjct: 81300 tacttcctccgttcctaaatataagtcttttaagaggtttcactaa 81255 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcacta 131 ||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 14490 tactccctccgttcctaaatataagtctttgtagagatttcacta 14534 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 66606 tactccctccgttcctaaatataag 66630
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 194 bits (98), Expect = 2e-46 Identities = 143/158 (90%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||| | Sbjct: 23274 tactccctccgttcctaaatataagtcttttaaggaatttcactaatgatctacatacag 23333 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 |||||||||| ||||||| |||||||| ||||| ||||||||| |||||||||| || | Sbjct: 23334 agcaaaatgagtgaatctacattctaaaatatgtttatatacattcgtatgtagttcatt 23393 Query: 207 agtgaaatctttacaaagacgtatatttaggaacagag 244 ||||||||||||| |||||| ||||||||||||||||| Sbjct: 23394 agtgaaatctttagaaagacttatatttaggaacagag 23431 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacg 145 ||||||||| ||| |||||||||||||||| | ||||||||||| || ||||||||| Sbjct: 23437 tactccctctgttcctaaatataagtctttctaaagatttcactaatgaactacatacg 23379 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 104 aatataagtcttttaagcgatttca 128 ||||||||||||||||| ||||||| Sbjct: 23088 aatataagtcttttaagagatttca 23064
>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region Length = 12998 Score = 180 bits (91), Expect = 3e-42 Identities = 133/147 (90%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 12669 tactccctccgttcctaaatataagtcttttaagcgatttcactaagagactacatacgg 12728 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 |||||||||| ||||||| | | |||| |||||||||||||||||||||||||||| || Sbjct: 12729 agcaaaatgagtgaatctacactttaaaatatgtctatatacatccgtatgtagtcctct 12788 Query: 207 agtgaaatctttacaaagacgtatatt 233 |||||||||| || |||||| |||||| Sbjct: 12789 agtgaaatctctaaaaagacttatatt 12815 Score = 52.0 bits (26), Expect = 0.002 Identities = 55/62 (88%), Gaps = 2/62 (3%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcacta-aggatctacatacg 145 ||||||||||||| | |||||||||||||| || |||||||||| |||| ||||||||| Sbjct: 12832 tactccctccgttccataatataagtctttttagagatttcactagagga-ctacatacg 12774 Query: 146 ga 147 || Sbjct: 12773 ga 12772
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacata 143 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 93726 tagtactccctccgttcctaaatataagtcttttaagcgatttcactaagggattacata 93785 Query: 144 cggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtcc 203 | ||||||||||| ||||||| | ||||||||||||||||||||||||||| ||||||| Sbjct: 93786 cagagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtacgtagtcc 93845 Query: 204 actagtgaaatctttacaaagacgtatatt 233 |||||| ||||| || |||||| |||||| Sbjct: 93846 tctagtgcaatctctaaaaagacttatatt 93875 Score = 170 bits (86), Expect = 3e-39 Identities = 131/146 (89%) Strand = Plus / Plus Query: 95 ccgttactaaatataagtcttttaagcgatttcactaaggatctacatacggagcaaaat 154 ||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 67793 ccgttcctaaatataagtcttttaagcgatttcactatatgtctacatacgaagcaaaat 67852 Query: 155 gatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccactagtgaaat 214 ||| |||| || | |||||| ||||||||||||||||||||| | ||||||||||||||| Sbjct: 67853 gattgaatgtacactctaaaatatgtctatatacatccgtatatggtccactagtgaaat 67912 Query: 215 ctttacaaagacgtatatttaggaac 240 || ||||||||| ||||||||||||| Sbjct: 67913 ctctacaaagacttatatttaggaac 67938 Score = 123 bits (62), Expect = 5e-25 Identities = 131/154 (85%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 |||||||||||| ||||||||||||||||||| |||| |||| || |||||||| Sbjct: 55558 tactccctccgtacctaaatataagtcttttaaaatattttactagatgtccacatacgg 55617 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 || ||||||| ||||||||||| ||||||||||||||||||||||||||||||| || | Sbjct: 55618 agtaaaatgaatgaatctatattttaaagtatgtctatatacatccgtatgtagttcatt 55677 Query: 207 agtgaaatctttacaaagacgtatatttaggaac 240 ||| || || || |||||| ||||||||||||| Sbjct: 55678 agttgaacctctagaaagacttatatttaggaac 55711 Score = 95.6 bits (48), Expect = 1e-16 Identities = 134/159 (84%), Gaps = 4/159 (2%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcacta-aggatctacatacg 145 |||||| |||||| ||||||||||||||||| || |||| |||| ||| ||||||||| Sbjct: 4733 tactccatccgttcctaaatataagtctttttagagattctactagagg--ctacatacg 4790 Query: 146 gagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccac 205 ||| ||||||| || ||| | ||||| |||||| |||||||||||||||||||||| Sbjct: 4791 gagaaaaatgagtgagcctacactctaaggtatgtatatatacatccgtatgtagtcc-g 4849 Query: 206 tagtgaaatctttacaaagacgtatatttaggaacagag 244 ||||| || || ||||||||| |||||||| |||||||| Sbjct: 4850 tagtggaacctctacaaagacttatatttaagaacagag 4888 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcacta 131 ||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 67948 tactccctccgttcctaaatataagtctttgtagagatttcacta 67904 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttt 116 ||||||||||||| |||||||||||||||| Sbjct: 55721 tactccctccgttcctaaatataagtcttt 55692 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcacta 131 ||||||||||||| | |||||||||||||| || |||| ||||| Sbjct: 93892 tactccctccgttccataatataagtctttttagagattgcacta 93848
>gb|U87149.1|HVU87149 Hordeum vulgare nucellin gene, complete cds Length = 3686 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacata 143 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 2183 tagtactccctccgttcctaaatataagtcttttaagcgatttcactaagggattacata 2124 Query: 144 cggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtcc 203 | ||||||||||| ||||||| | ||||||||||||||||||||||||||| ||||||| Sbjct: 2123 cagagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtacgtagtcc 2064 Query: 204 actagtgaaatctttacaaagacgtatatt 233 |||||| ||||| || |||||| |||||| Sbjct: 2063 tctagtgcaatctctaaaaagacttatatt 2034 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcacta 131 ||||||||||||| | |||||||||||||| || |||| ||||| Sbjct: 2017 tactccctccgttccataatataagtctttttagagattgcacta 2061
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 170 bits (86), Expect = 3e-39 Identities = 134/150 (89%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 |||||| |||||| |||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 29997 tactccatccgtttctaaatataagtcttttaagcgattttactaagaatctacatacgg 29938 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 ||||||||||| ||||||| | |||||| ||||||||||| ||||| |||||||| |||| Sbjct: 29937 agcaaaatgattgaatctacactctaaaatatgtctatatgcatccatatgtagttcact 29878 Query: 207 agtgaaatctttacaaagacgtatatttag 236 ||| ||| || || |||||| ||||||||| Sbjct: 29877 agtaaaacctctaaaaagacttatatttag 29848 Score = 165 bits (83), Expect = 2e-37 Identities = 139/155 (89%), Gaps = 2/155 (1%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcacta-aggatctacatacg 145 ||||||||||||| ||||||||||||||||| || |||||| ||| | || ||||||||| Sbjct: 76975 tactccctccgttcctaaatataagtctttttagagatttcgctagacga-ctacatacg 76917 Query: 146 gagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccac 205 ||||||||||| |||||||||||||||| |||||||||||||||||| |||||||| || Sbjct: 76916 gagcaaaatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagtctac 76857 Query: 206 tagtgaaatctttacaaagacgtatatttaggaac 240 |||||||| || || |||||| ||||||||||||| Sbjct: 76856 tagtgaaacctctaaaaagacttatatttaggaac 76822 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 86 gtactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacg 145 |||||||||||||| ||||||||| | ||| || ||||||| || | ||| ||||| Sbjct: 23214 gtactccctccgttctaaaatataagaccttttagggatttcattaggagactatatacg 23155 Query: 146 gagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagt 201 ||||||||||| |||| |||| | |||| ||||||||| |||||||||||||||| Sbjct: 23154 gagcaaaatgaatgaatatatactttaaaatatgtctatgtacatccgtatgtagt 23099 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 86 gtactccctccgttactaaatataagtcttttaagcgatttcacta 131 |||||||||||||| ||||||||||||||||| || | |||||||| Sbjct: 76811 gtactccctccgttcctaaatataagtctttttagaggtttcacta 76856 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 190 tccgtatgtagtccactagtgaaatctttacaaagacgtatatttaggaac 240 ||||||||||||| |||| ||||||| || |||||| ||||||||||||| Sbjct: 76915 tccgtatgtagtcgtctagcgaaatctctaaaaagacttatatttaggaac 76965 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtctttt 117 ||||||||||||| ||||||||||||||||| Sbjct: 29834 tactccctccgtttctaaatataagtctttt 29864 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 86 gtactccctccgttactaaatataag 111 |||||||||||||| ||||||||||| Sbjct: 23050 gtactccctccgtttctaaatataag 23075
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 159 bits (80), Expect = 1e-35 Identities = 95/100 (95%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 73866 tactccctccgttcctaaatataagtcttttaagcgatttcactaagggtctacattcgg 73925 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatat 186 ||||||||||| ||||||||| |||||||||||||||||| Sbjct: 73926 agcaaaatgattgaatctatactctaaagtatgtctatat 73965 Score = 113 bits (57), Expect = 5e-22 Identities = 134/157 (85%), Gaps = 2/157 (1%) Strand = Plus / Plus Query: 85 agtactccctccgttactaaatataagtcttttaagcgatttcacta-aggatctacata 143 ||||| ||||||||| ||||||||||||||||| || |||||| || |||| ||||||| Sbjct: 71689 agtaccccctccgttcctaaatataagtctttttagacatttcaatagagga-ctacata 71747 Query: 144 cggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtcc 203 || |||||||||| |||| | | |||| |||||||||||||||||||||||||| | Sbjct: 71748 cgaagcaaaatgagtgaattcacgctttaaaatatgtctatatacatccgtatgtagttc 71807 Query: 204 actagtgaaatctttacaaagacgtatatttaggaac 240 | ||||||||||| || |||||| ||||||||||||| Sbjct: 71808 aatagtgaaatctctagaaagacttatatttaggaac 71844 Score = 103 bits (52), Expect = 5e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 181 ctatatacatccgtatgtagtccactagtgaaatctttacaaagacgtatatttaggaac 240 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 90825 ctatatacatccgtatgtagtccactagtgaaatctctacaaagacttatatttaggaac 90884 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| |||||||||||||||| || |||||||||| || |||||||||| Sbjct: 71854 tactccctccgttcctaaatataagtctttctagagatttcactattgaactacatacgg 71795 Query: 147 a 147 | Sbjct: 71794 a 71794 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 85 agtactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatac 144 ||||||||||||||| |||||||||||||||| || |||||||||| | |||||||| Sbjct: 90896 agtactccctccgttcctaaatataagtctttgtagagatttcactagtggactacatac 90837 Query: 145 gga 147 ||| Sbjct: 90836 gga 90834 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 192 cgtatgtagtccactagtgaaatctttacaaagacgtatatttaggaac 240 |||||||||||| ||| |||||| | || |||||| ||||||||||||| Sbjct: 71749 cgtatgtagtcctctattgaaatgtctaaaaagacttatatttaggaac 71701
>gb|DQ201147.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1a) pseudogene, complete sequence Length = 1112 Score = 159 bits (80), Expect = 1e-35 Identities = 95/100 (95%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 817 tactccctccgttcctaaatataagtcttttaagcgatttcactaagggtctacattcgg 876 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatat 186 ||||||||||| ||||||||| |||||||||||||||||| Sbjct: 877 agcaaaatgattgaatctatactctaaagtatgtctatat 916
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 155 bits (78), Expect = 1e-34 Identities = 135/154 (87%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| Sbjct: 91844 tactccctccgttcctaaatataagtcttttaagaaatttcactaagagactacatacaa 91785 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 |||||||||| |||| |||||| ||||||||||||| ||||||||||||||||||| | Sbjct: 91784 agcaaaatgagtgaatatatattttaaagtatgtctaaatacatccgtatgtagtcctat 91725 Query: 207 agtgaaatctttacaaagacgtatatttaggaac 240 ||||||| || || |||||| ||||||||||||| Sbjct: 91724 agtgaaacctctaaaaagacttatatttaggaac 91691 Score = 105 bits (53), Expect = 1e-19 Identities = 129/153 (84%), Gaps = 1/153 (0%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||| ||| |||||||||||||||||||| |||| || | | |||||||||| Sbjct: 85397 tactccctctgttcctaaatataagtcttttaagatattt-accaggagtctacatacga 85339 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 |||||||||| |||||| | |||||||||||||||||||||||||||||||| || | Sbjct: 85338 agcaaaatgagtaaatctacactctaaagtatgtctatatacatccgtatgtagcgcatt 85279 Query: 207 agtgaaatctttacaaagacgtatatttaggaa 239 | ||||| || | |||||| |||||||||||| Sbjct: 85278 aatgaaacctctttaaagacttatatttaggaa 85246 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 173 aagtatgtctatatacatccgtatgtagtccactagtgaaatct 216 |||||||| ||| |||||||| ||||| | |||||||||||||| Sbjct: 74287 aagtatgtttatgtacatccgaatgtaattcactagtgaaatct 74244 Score = 44.1 bits (22), Expect = 0.39 Identities = 48/54 (88%), Gaps = 2/54 (3%) Strand = Plus / Plus Query: 95 ccgttactaaatataagtcttttaagcgatttcacta-aggatctacatacgga 147 ||||| ||||||||||||||||| || | |||||||| |||| ||||||||||| Sbjct: 91689 ccgttcctaaatataagtctttttagaggtttcactatagga-ctacatacgga 91741 Score = 42.1 bits (21), Expect = 1.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 |||||||| | || |||||||||||||||| ||| | ||||| ||| | |||||||||| Sbjct: 85235 tactcccttcattcctaaatataagtctttaaagaggtttcattaatgcgctacatacgg 85294 Query: 147 a 147 | Sbjct: 85295 a 85295 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 171 taaagtatgtctatatacatccgtatgtagtcc 203 |||| ||| ||||||||||| |||||||||||| Sbjct: 18734 taaaatatatctatatacattcgtatgtagtcc 18766 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 aaagacgtatatttaggaacagag 244 |||||| ||||||||||||||||| Sbjct: 85368 aaagacttatatttaggaacagag 85391
>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098 cyclic nucleotide-gated ion channel 4 (Nec1) gene, complete cds Length = 9090 Score = 147 bits (74), Expect = 4e-32 Identities = 134/154 (87%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 |||||| |||||| |||||||||||||||| ||| ||||||||||| |||||||||||| Sbjct: 8528 tactccatccgttcctaaatataagtctttaaagatatttcactaagaatctacatacgg 8469 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 | |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| | | Sbjct: 8468 accaaaatgagtgaatctacactctaaaatatgtctatatacatccgtatgtagtctatt 8409 Query: 207 agtgaaatctttacaaagacgtatatttaggaac 240 | |||||||| | ||| || ||||||||||||| Sbjct: 8408 aatgaaatctctttaaaaacttatatttaggaac 8375 Score = 71.9 bits (36), Expect = 2e-09 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 141 atacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtag 200 ||||||| |||||||| ||||||||| | |||| ||||||||| ||||||||||||||| Sbjct: 238 atacggaacaaaatgaatgaatctatactttaaaatatgtctatgtacatccgtatgtag 297 Query: 201 tccactagtgaaatctttacaaagacgtatatttaggaac 240 | | ||||| ||||| || |||| | ||||||||||||| Sbjct: 298 ttta-tagtgcaatctctaaaaagtcttatatttaggaac 336 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 159 gaatctatattctaaagtatgtctatatacatccgtatgtagtccactagtgaaatcttt 218 ||||||| | |||||| ||||||||||||||| |||||||||| | || |||||||| | Sbjct: 8323 gaatctacactctaaaatatgtctatatacatttgtatgtagtctattaatgaaatctct 8264 Query: 219 acaaagacgtatatttagg 237 |||||| |||||||||| Sbjct: 8263 ttaaagacttatatttagg 8245 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 85 agtactccctccgttactaaatataagtcttttaagcgatttca 128 ||||||||||||||| |||||||||||| ||| ||| ||||||| Sbjct: 8363 agtactccctccgttcctaaatataagtttttaaagagatttca 8406 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcacta 131 ||||||||||||| ||||||||||| ||||| || |||| ||||| Sbjct: 346 tactccctccgttcctaaatataagactttttagagattgcacta 302 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 101 ctaaatataagtcttttaagcgatttca 128 |||||||||||||||| ||| ||||||| Sbjct: 8246 ctaaatataagtctttaaagagatttca 8273
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 147 bits (74), Expect = 4e-32 Identities = 134/154 (87%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| |||||||||||||||||||| ||||||||||||| | |||||||| Sbjct: 47280 tactccctccgttcctaaatataagtcttttaagagatttcactaagggtttacatacga 47339 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 || ||||||| ||||| | | | ||||||||||||||||||||| ||||||||| | || Sbjct: 47340 agtaaaatgagtgaatcaacactttaaagtatgtctatatacatctgtatgtagttctct 47399 Query: 207 agtgaaatctttacaaagacgtatatttaggaac 240 ||||||| || || |||||| |||||||| |||| Sbjct: 47400 agtgaaacctctaaaaagacttatatttacgaac 47433 Score = 63.9 bits (32), Expect = 4e-07 Identities = 93/112 (83%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| ||||||||||| | ||| | |||| ||||| | ||| |||||| Sbjct: 61170 tactccctccgttcctaaatataagaccttttaaagattacactataaa-ctagatacgg 61112 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgt 198 |||||||||| ||||||| || ||||| |||| ||| |||||||||||||| Sbjct: 61111 agcaaaatgagtgaatctacatcctaaaatatgactacatacatccgtatgt 61060 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 85 agtactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatac 144 ||||||||||||||| |||||||||||||||| || | |||||||| || |||||||| Sbjct: 47445 agtactccctccgttcgtaaatataagtctttttagaggtttcactagagaactacatac 47386 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataa 110 ||||||||||||| |||||||||| Sbjct: 60938 tactccctccgttcctaaatataa 60961
>gb|AF234163.1|AF234163 Hordeum vulgare starch synthase I (SSI) gene, complete cds Length = 8387 Score = 145 bits (73), Expect = 1e-31 Identities = 136/156 (87%), Gaps = 2/156 (1%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| |||||||||||||||||||| |||||||| ||| |||||||||| Sbjct: 251 tactccctccgtttctaaatataagtcttttaagagatttcaccaagagtctacatacga 310 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtc--tatatacatccgtatgtagtcca 204 |||||||||| |||||| | | ||||||||||| |||||| |||||||||||||| | Sbjct: 311 agcaaaatgaatgaatctgcactttaaagtatgtctatatatatatccgtatgtagtcta 370 Query: 205 ctagtgaaatctttacaaagacgtatatttaggaac 240 |||||| ||||| || |||||| ||||||||||||| Sbjct: 371 ctagtggaatctctagaaagacttatatttaggaac 406 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 86 gtactccctccgttactaaatataagtcttt 116 |||||||||||||| |||||||||||||||| Sbjct: 417 gtactccctccgttcctaaatataagtcttt 387
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 133 bits (67), Expect = 5e-28 Identities = 130/151 (86%) Strand = Plus / Minus Query: 86 gtactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacg 145 |||||||||||||| | |||||||||| ||||||||||||| |||| | |||||||||| Sbjct: 30438 gtactccctccgttccgaaatataagttttttaagcgattttactacgtgtctacatacg 30379 Query: 146 gagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccac 205 || ||||||||| |||| || | |||||| ||||||||||||||| |||||||| | ||| Sbjct: 30378 gaacaaaatgattgaatatacactctaaaatatgtctatatacattcgtatgtaattcac 30319 Query: 206 tagtgaaatctttacaaagacgtatatttag 236 || ||||| || || |||||| ||||||||| Sbjct: 30318 taatgaaacctgtaaaaagacttatatttag 30288 Score = 131 bits (66), Expect = 2e-27 Identities = 132/154 (85%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 |||||||||||||||||||||||||||||||||| ||||| |||| |||||||| Sbjct: 143731 tactccctccgttactaaatataagtcttttaagagattttactagacgtctacatataa 143672 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 | | |||||| |||| |||||| |||| ||||| ||||||||||||||||||||||||| Sbjct: 143671 aactaaatgagtgaatatatattttaaaatatgtttatatacatccgtatgtagtccact 143612 Query: 207 agtgaaatctttacaaagacgtatatttaggaac 240 |||||||| | || |||||| || |||||||||| Sbjct: 143611 agtgaaatttctagaaagacttacatttaggaac 143578 Score = 123 bits (62), Expect = 5e-25 Identities = 129/150 (86%), Gaps = 1/150 (0%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 |||||||||||| |||||||||||||||||||||||||| ||||||| || ||||||| Sbjct: 197492 tactccctccgtccctaaatataagtcttttaagcgattt-actaagggtcaacatacga 197550 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 | ||||| || |||| ||| ||||||||||||||||||||||||||||||||| | | Sbjct: 197551 aataaaataattgaatgtatgctctaaagtatgtctatatacatccgtatgtagtttaat 197610 Query: 207 agtgaaatctttacaaagacgtatatttag 236 | ||||| || || |||||| ||||||||| Sbjct: 197611 aatgaaacctctaaaaagacttatatttag 197640 Score = 79.8 bits (40), Expect = 7e-12 Identities = 115/140 (82%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| |||||||||| |||||| || ||||| |||||| ||||||||| Sbjct: 208503 tactccctccgtttctaaatataaatctttttagagattttactaagtgactacatacga 208444 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 | ||||| | |||| ||||||||||| |||||||||||| | | ||||||||| || Sbjct: 208443 aataaaataaatgaatgtatattctaaaatatgtctatatataatcatatgtagtcttct 208384 Query: 207 agtgaaatctttacaaagac 226 ||||||| || | ||||||| Sbjct: 208383 agtgaaacctcttcaaagac 208364 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtctttt 117 ||||||||||||| ||||||||||||||||| Sbjct: 30274 tactccctccgtttctaaatataagtctttt 30304 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtctttt 117 |||||||| |||| ||||||||||||||||| Sbjct: 197654 tactcccttcgtttctaaatataagtctttt 197624 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttt 116 ||||||||||||| |||||| ||||||||| Sbjct: 143568 tactccctccgttcctaaatgtaagtcttt 143597
>gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (Gamyb) gene, complete cds Length = 6228 Score = 133 bits (67), Expect = 5e-28 Identities = 76/79 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 5156 tactccctccgttcctaaatataagtcttttaagcgatttcactaaggatctacataggg 5215 Query: 147 agcaaaatgatcgaatcta 165 ||||||||||| ||||||| Sbjct: 5216 agcaaaatgattgaatcta 5234 Score = 115 bits (58), Expect = 1e-22 Identities = 130/154 (84%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 |||||||||||| | |||||||||||||||||| |||||||| | ||| ||||||| Sbjct: 5396 tactccctccgtaccaaaatataagtcttttaagatatttcactgggtgtctgcatacgg 5337 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 |||||||||| ||||||||| | |||||||||||||||| ||||||| ||||||||| | Sbjct: 5336 agcaaaatgaatgaatctatactttaaagtatgtctatatgcatccgtttgtagtccatt 5277 Query: 207 agtgaaatctttacaaagacgtatatttaggaac 240 ||| ||||| || || || ||||||||||||| Sbjct: 5276 agttgaatctctagaagaacttatatttaggaac 5243 Score = 105 bits (53), Expect = 1e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 164 tatattctaaagtatgtctatatacatccgtatgtagtccactagtgaaatctttacaaa 223 ||||||||||||||| |||||||||||||||||||||||||||||| |||||| || ||| Sbjct: 5395 tatattctaaagtatatctatatacatccgtatgtagtccactagtaaaatctctagaaa 5454 Query: 224 gacgtatatttag 236 ||| ||||||||| Sbjct: 5455 gacttatatttag 5467 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagt 112 ||||||||||||| |||||||||||| Sbjct: 5233 tactccctccgttcctaaatataagt 5258
>gb|AF250934.1|AF250934 Hordeum vulgare germin B (GerB) gene, complete cds Length = 2798 Score = 131 bits (66), Expect = 2e-27 Identities = 132/154 (85%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 389 tactccctccgtttctaaatataagtcttttaagatatttcactagaagtctacatacgg 448 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 |||||||||| |||||| ||| |||||||||||||||| |||||||||||||| |||| Sbjct: 449 agcaaaatgagttaatctacattgtaaagtatgtctatatgcatccgtatgtagttcact 508 Query: 207 agtgaaatctttacaaagacgtatatttaggaac 240 | |||| || | |||| | ||||||||||||| Sbjct: 509 aaagaaacctctttaaagtcttatatttaggaac 542 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 86 gtactccctccgttactaaatataagtcttt 116 |||||||||||||| ||||||||||| |||| Sbjct: 553 gtactccctccgttcctaaatataagacttt 523
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete sequence; splicing factor SF2-like protein (SF2) and universal stress protein (USP1) genes and Hv receptor-kinase-like pseudogene, complete cds; and retrotransposons Sandra6 and Sandra7, complete sequence Length = 82293 Score = 125 bits (63), Expect = 1e-25 Identities = 130/151 (86%), Gaps = 1/151 (0%) Strand = Plus / Minus Query: 90 tccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacggagc 149 |||||||||| ||| |||||||||||||||| ||||||||| | |||||||||| ||| Sbjct: 50628 tccctccgttcctagatataagtcttttaagatatttcactaggagtctacatacgaagc 50569 Query: 150 aaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccactagt 209 ||||||| ||||||| | | |||| ||||||||||||||||| |||||||||||||| | Sbjct: 50568 aaaatgagtgaatctacactttaaaatatgtctatatacatccatatgtagtccactaat 50509 Query: 210 gaaatctttacaaagacgtatatttaggaac 240 |||| |||| |||||| |||||||| |||| Sbjct: 50508 gaaaccttt-taaagacttatatttaagaac 50479 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttt 116 ||||||||||||| ||||||||||||||| Sbjct: 50469 tactccctccgttcttaaatataagtcttt 50498
>gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through 6 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 13878 Score = 125 bits (63), Expect = 1e-25 Identities = 134/155 (86%), Gaps = 2/155 (1%) Strand = Plus / Minus Query: 85 agtactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatac 144 ||||||| ||||||| ||||||||||||||||| || |||| ||||| ||| |||||||| Sbjct: 7576 agtactcactccgttcctaaatataagtctttttagagattacactatgga-ctacatac 7518 Query: 145 ggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtcca 204 |||||||||| | ||||| | ||||||||||||||||||||||||||||||||| | Sbjct: 7517 aaagcaaaatgagtgcatctacactctaaagtatgtctatatacatccgtatgtagttc- 7459 Query: 205 ctagtgaaatctttacaaagacgtatatttaggaa 239 ||||| ||||| || |||||| |||||||||||| Sbjct: 7458 gtagtggaatctctaaaaagacctatatttaggaa 7424 Score = 50.1 bits (25), Expect = 0.006 Identities = 47/53 (88%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 193 gtatgtagtccactagtgaaatctttacaaagacgtatatttaggaacagagt 245 |||||||||||| ||||| ||||| || |||||| ||||||||||||| |||| Sbjct: 7518 gtatgtagtcca-tagtgtaatctctaaaaagacttatatttaggaacggagt 7569
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 123 bits (62), Expect = 5e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 |||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 194500 tacttcctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacga 194441 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtat 196 ||||||||||| |||| | ||| |||||||||||||||||||||||||| Sbjct: 194440 agcaaaatgattgaatattcattttaaagtatgtctatatacatccgtat 194391 Score = 115 bits (58), Expect = 1e-22 Identities = 132/154 (85%), Gaps = 2/154 (1%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| ||||||| |||||||||||| |||| |||| || |||||||||| Sbjct: 148 tactccctccgttcctaaatacaagtcttttaagagattcaactataga-ctacatacgg 206 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 |||||||||| ||||||| | ||||||||||||||||||||||||||| |||| | | Sbjct: 207 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtacatagt-ctgt 265 Query: 207 agtgaaatctttacaaagacgtatatttaggaac 240 |||||||| | | |||||| ||||||||||||| Sbjct: 266 agtgaaatttcttaaaagacttatatttaggaac 299 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| | ||||||||| | ||| || ||||||||| | |||||||||| Sbjct: 1592 tactccctccgttccaaaatataagaccttttaggtatttcactaggagactacatacgg 1651 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagt 201 |||||||||| ||||||||| |||||| ||||||||| |||||||||||||||| Sbjct: 1652 agcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgtatgtagt 1706 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/107 (85%), Gaps = 2/107 (1%) Strand = Plus / Plus Query: 136 tctacatacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgta 195 |||||||||||||||||| || ||||||| ||||||||| ||||||||||||||||| Sbjct: 143226 tctacatacggagcaaaacgagtaaatctatgctctaaagtacgtctatatacatccgta 143285 Query: 196 tgtagtccactagtgaaa--tctttacaaagacgtatatttaggaac 240 ||||||| |||||||| ||| | |||||| ||||||||||||| Sbjct: 143286 tgtagtcttgtagtgaaacctctaaaaaaagacttatatttaggaac 143332 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 137 ctacatacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtat 196 ||||||||| |||||||||| ||||||||| |||||| |||||| || || |||||||| Sbjct: 217237 ctacatacgaagcaaaatgagtgaatctatactctaaaatatgtcgatgtatatccgtat 217296 Query: 197 gtagt 201 ||||| Sbjct: 217297 gtagt 217301 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 137 ctacatacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtat 196 ||||||||||| |||||||| ||| |||| |||||||||| ||||| ||||||||||| Sbjct: 142803 ctacatacggaacaaaatgagttaatttatactctaaagtatatctatgtacatccgtat 142744 Query: 197 gtagt 201 ||||| Sbjct: 142743 gtagt 142739 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcacta 131 ||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 309 tactccctccgttcctaaatataagtcttttaagaaatttcacta 265 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaagg 134 ||||||||||||| ||||||||||||||||| | ||| ||||||||| Sbjct: 136684 tactccctccgttcctaaatataagtctttttaaagatgtcactaagg 136731 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 79 ctagctagtactccctccgttactaaatataagtctttt 117 ||||| ||||||| ||||||| ||||||||||||||||| Sbjct: 143350 ctagcaagtactcgctccgttcctaaatataagtctttt 143312 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtctttta 118 |||| |||||||| |||||||||||||||||| Sbjct: 190752 tacttcctccgtttctaaatataagtctttta 190783 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaagg 134 |||||||| |||| ||||||||||||||||| | ||| ||||||||| Sbjct: 96971 tactcccttcgttcctaaatataagtctttttaaagatgtcactaagg 97018 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Minus Query: 206 tagtgaaatctttacaaagacgtatatttaggaac 240 |||||| ||||||| |||||| ||||||||||||| Sbjct: 136728 tagtgacatctttaaaaagacttatatttaggaac 136694 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Minus Query: 206 tagtgaaatctttacaaagacgtatatttaggaac 240 |||||| ||||||| |||||| ||||||||||||| Sbjct: 97015 tagtgacatctttaaaaagacttatatttaggaac 96981 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 1754 tactccctccgttcctaaatataag 1730 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 actccctccgttactaaatataag 111 |||||||||||| ||||||||||| Sbjct: 142692 actccctccgttgctaaatataag 142715
>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene, complete cds Length = 25080 Score = 123 bits (62), Expect = 5e-25 Identities = 134/158 (84%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||| | ||||||||||||||||| || |||||||||||| ||||||||| Sbjct: 22020 tactccctccgatcctaaatataagtctttttagagatttcactaagtgactacatacgt 21961 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 || |||||| |||| | |||| |||||||||| ||||||||||||||||| || || Sbjct: 21960 agtaaaatgcatgaatgtgcattccaaagtatgtccatatacatccgtatgtaatcttct 21901 Query: 207 agtgaaatctttacaaagacgtatatttaggaacagag 244 |||||||||| | |||||| ||||||||||||||||| Sbjct: 21900 agtgaaatctctttaaagacttatatttaggaacagag 21863 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 137 ctacatacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtat 196 ||||||||| |||||||||| ||||||||| |||||| ||||||||| ||||||||||| Sbjct: 5478 ctacatacgaagcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgtat 5419 Query: 197 gtagt 201 ||||| Sbjct: 5418 gtagt 5414 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcacta 131 ||||||||| ||| |||||||||||||||| ||| |||||||||| Sbjct: 21857 tactccctctgttcctaaatataagtctttaaagagatttcacta 21901 Score = 46.1 bits (23), Expect = 0.099 Identities = 41/47 (87%) Strand = Plus / Plus Query: 192 cgtatgtagtccactagtgaaatctttacaaagacgtatatttagga 238 ||||||||||| ||||||||||| || |||||| ||||||||||| Sbjct: 21962 cgtatgtagtcacttagtgaaatctctaaaaagacttatatttagga 22008 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 5366 tactccctccgttcctaaatataag 5390
>gb|DQ324801.1| Hordeum vulgare subsp. vulgare germin B (GerB) gene, promoter and partial cds Length = 1326 Score = 123 bits (62), Expect = 5e-25 Identities = 131/154 (85%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| |||||||||||||||||||| |||||| || ||||||||||| Sbjct: 88 tactccctccgtttctaaatataagtcttttaagatatttcagtagaagtctacatacgg 147 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 |||||||||| |||||| ||| |||||||||||||||| |||||||||||||| |||| Sbjct: 148 agcaaaatgagttaatctacattgtaaagtatgtctatatgcatccgtatgtagttcact 207 Query: 207 agtgaaatctttacaaagacgtatatttaggaac 240 | |||| || | |||| | ||||||||||||| Sbjct: 208 aaagaaacctctttaaagtcttatatttaggaac 241 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 86 gtactccctccgttactaaatataagtcttt 116 |||||||||||||| ||||||||||| |||| Sbjct: 252 gtactccctccgttcctaaatataagacttt 222
>gb|AY821693.1| Australopyrum velutinum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1595 Score = 119 bits (60), Expect = 8e-24 Identities = 134/156 (85%), Gaps = 2/156 (1%) Strand = Plus / Minus Query: 85 agtactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatac 144 ||||||||||| ||| ||||||||||||||||| || |||| | || ||| |||||||| Sbjct: 1379 agtactccctctgttcctaaatataagtctttttagagattctaatatgga-ctacatac 1321 Query: 145 ggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtcca 204 |||||||||||| ||||||| | |||||| || |||||||| ||||||||||||||||| Sbjct: 1320 ggagcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtcca 1261 Query: 205 ctagtgaaatctttacaaagacgtatatttaggaac 240 || | |||||| || |||||| ||||||||||||| Sbjct: 1260 -tattcaaatctctaaaaagacttatatttaggaac 1226 Score = 58.0 bits (29), Expect = 3e-05 Identities = 54/61 (88%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| ||||||||||||||||| || ||||| | || ||| |||||||||| Sbjct: 1216 tactccctccgttcctaaatataagtctttttagagatttgaatatgga-ctacatacgg 1274 Query: 147 a 147 | Sbjct: 1275 a 1275 Score = 46.1 bits (23), Expect = 0.099 Identities = 48/55 (87%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 190 tccgtatgtagtccactagtgaaatctttacaaagacgtatatttaggaacagag 244 ||||||||||||||| || | ||||| || |||||| ||||||||||||||||| Sbjct: 1318 tccgtatgtagtcca-tattagaatctctaaaaagacttatatttaggaacagag 1371
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 117 bits (59), Expect = 3e-23 Identities = 126/147 (85%), Gaps = 1/147 (0%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||| ||| ||||||||||||||||||||||||||| ||| | |||||||| Sbjct: 6361 tactccctctgttcttaaatataagtcttttaagcgatttcatcaagaaactacatacaa 6302 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 | ||||| || ||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct: 6301 aacaaaaagaatgaatctacactctaaagtatgtctatatacatccgtatgtagtcc-tt 6243 Query: 207 agtgaaatctttacaaagacgtatatt 233 |||||||||| || || ||| |||||| Sbjct: 6242 agtgaaatctctaaaatgacttatatt 6216 Score = 58.0 bits (29), Expect = 3e-05 Identities = 54/61 (88%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| | |||||||||| ||| || |||||||||||||| |||||||||| Sbjct: 6199 tactccctccgttccataatataagtcattttagagatttcactaagga-ctacatacgg 6257 Query: 147 a 147 | Sbjct: 6258 a 6258
>gb|DQ386610.1| Hordeum vulgare subsp. vulgare protein kinase ABC1063 gene, complete cds Length = 7813 Score = 115 bits (58), Expect = 1e-22 Identities = 130/154 (84%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 |||||||||||| |||||||||||| ||||||| |||||| || ||||||||||| Sbjct: 2192 tactccctccgtacctaaatataagtattttaagatatttcattagatgtctacatacgg 2251 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 |||||||||| ||| ||||| | |||| ||||||||||||||||||||||||||||| | Sbjct: 2252 agcaaaatgaatgaacctatactttaaaatatgtctatatacatccgtatgtagtccatt 2311 Query: 207 agtgaaatctttacaaagacgtatatttaggaac 240 ||| | || || |||||| ||||||||||||| Sbjct: 2312 agttggacctctagaaagacttatatttaggaac 2345 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttt 116 ||||||||||||| |||||||||||||||| Sbjct: 2355 tactccctccgttcctaaatataagtcttt 2326
>gb|AF308474.1|AF308474 Hordeum vulgare asparaginase gene, complete cds Length = 2659 Score = 105 bits (53), Expect = 1e-19 Identities = 129/153 (84%), Gaps = 1/153 (0%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| ||||||||| ||||||||| || ||||||| || |||||| | | Sbjct: 1607 tactccctccgttcttaaatataaatcttttaagagacttcactagtgaactacatgcag 1548 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 | |||||||| |||| || | ||||||||||||||||||| ||||||||||||| || Sbjct: 1547 aacaaaatgaatgaatgtacactctaaagtatgtctatataaatccgtatgtagt-ttct 1489 Query: 207 agtgaaatctttacaaagacgtatatttaggaa 239 | ||||| ||||| |||||| |||||||||||| Sbjct: 1488 aatgaaacctttaaaaagacttatatttaggaa 1456 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtctttt 117 |||||||||| || ||||||||||||||||| Sbjct: 1445 tactccctccattcctaaatataagtctttt 1475
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6 Length = 4230 Score = 105 bits (53), Expect = 1e-19 Identities = 130/153 (84%), Gaps = 2/153 (1%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| |||||||||||||||| | ||||||| || ||| | |||||||| Sbjct: 2946 tactccctccgttcctaaatataagtctttggacagatttcattatgga-ccacatacgg 2888 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 || ||||||| ||| ||||| |||||| | |||| |||||||||||||| ||||| | Sbjct: 2887 agtaaaatgagtgaacctatactctaaaatgcatctacatacatccgtatgtggtcca-t 2829 Query: 207 agtgaaatctttacaaagacgtatatttaggaa 239 |||||||||| ||||||||| |||||||||||| Sbjct: 2828 agtgaaatctctacaaagacttatatttaggaa 2796 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 86 gtactccctccgttactaaatataagtcttttaagcgatttcacta 131 ||||||||||| || |||||||||||||||| || |||||||||| Sbjct: 2784 gtactccctccattcctaaatataagtctttgtagagatttcacta 2829 Score = 46.1 bits (23), Expect = 0.099 Identities = 45/51 (88%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 190 tccgtatgtagtccactagtgaaatctttacaaagacgtatatttaggaac 240 ||||||||| ||||| || |||||||| | ||||||| ||||||||||||| Sbjct: 2887 tccgtatgtggtcca-taatgaaatctgtccaaagacttatatttaggaac 2936
>gb|AY821692.1| Australopyrum retrofractum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1602 Score = 103 bits (52), Expect = 5e-19 Identities = 132/156 (84%), Gaps = 2/156 (1%) Strand = Plus / Minus Query: 85 agtactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatac 144 ||||| ||||| ||| ||||||||||||||||| || |||| | || ||| |||||||| Sbjct: 1385 agtaccccctctgttcctaaatataagtctttttagagattctaatatgga-ctacatac 1327 Query: 145 ggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtcca 204 |||||||||||| ||||||| | |||||| || |||||||| |||||||||||||| || Sbjct: 1326 ggagcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtgca 1267 Query: 205 ctagtgaaatctttacaaagacgtatatttaggaac 240 || | |||||| || |||||| ||||||||||||| Sbjct: 1266 -tattcaaatctctaaaaagacttatatttaggaac 1232 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgattt 126 ||||||||||||| ||||||||||||||||| || ||||| Sbjct: 1222 tactccctccgttcctaaatataagtctttttagagattt 1261 Score = 46.1 bits (23), Expect = 0.099 Identities = 48/55 (87%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 190 tccgtatgtagtccactagtgaaatctttacaaagacgtatatttaggaacagag 244 ||||||||||||||| || | ||||| || |||||| ||||||||||||||||| Sbjct: 1324 tccgtatgtagtcca-tattagaatctctaaaaagacttatatttaggaacagag 1377
>gb|DQ201157.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai cryptochrome 2 (Cry2) gene, partial cds; and stowaway MITE, complete sequence Length = 2686 Score = 103 bits (52), Expect = 5e-19 Identities = 126/148 (85%), Gaps = 2/148 (1%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcacta-aggatctacatacg 145 ||||||||||||| |||||||||||||||||||| ||||||||| | || ||| |||| Sbjct: 1823 tactccctccgttcctaaatataagtcttttaagatatttcactagatga-ctaaataca 1765 Query: 146 gagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccac 205 |||||||||| |||| || | ||||||||||||||| ||||||||||||||||||| Sbjct: 1764 aagcaaaatgagtgaatatacactctaaagtatgtctacatacatccgtatgtagtccta 1705 Query: 206 tagtgaaatctttacaaagacgtatatt 233 |||| ||||| || |||||| |||||| Sbjct: 1704 tagtagaatctctagaaagacttatatt 1677
>gb|DQ201148.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1b) pseudogene, complete sequence Length = 1147 Score = 103 bits (52), Expect = 5e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 181 ctatatacatccgtatgtagtccactagtgaaatctttacaaagacgtatatttaggaac 240 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 371 ctatatacatccgtatgtagtccactagtgaaatctctacaaagacttatatttaggaac 430 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 85 agtactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatac 144 ||||||||||||||| |||||||||||||||| || |||||||||| | |||||||| Sbjct: 442 agtactccctccgttcctaaatataagtctttgtagagatttcactagtggactacatac 383 Query: 145 gga 147 ||| Sbjct: 382 gga 380
>gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistance gene ABC1041 (ABC1041) gene, complete cds Length = 8735 Score = 103 bits (52), Expect = 5e-19 Identities = 102/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcacta-aggatctacatacg 145 ||||||||||||| | ||||||||| | ||| || ||||||||| | || ||||||||| Sbjct: 5640 tactccctccgttccaaaatataagaccttttaggtatttcactagaaga-ctacatacg 5698 Query: 146 gagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagt 201 ||||||||||| |||||||||| |||||| ||||||||| |||||||||||||||| Sbjct: 5699 gagcaaaatgagcgaatctatactctaaaatatgtctatgtacatccgtatgtagt 5754 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 5802 tactccctccgttcctaaatataag 5778
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 99.6 bits (50), Expect = 8e-18 Identities = 131/154 (85%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| |||||||||||||||| ||| |||| || || || | ||||| || Sbjct: 23112 tactccctccgttcctaaatataagtctttgaagtgattccattatagacc-acataagg 23170 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 |||||||||| ||||||||| | |||| | ||||||||||||||||||| || || | Sbjct: 23171 agcaaaatgagtgaatctatact-taaaatgcatctatatacatccgtatgtggttca-t 23228 Query: 207 agtgaaatctttacaaagacgtatatttaggaac 240 |||||||||| ||||||||| ||||||||||||| Sbjct: 23229 agtgaaatctctacaaagacttatatttaggaac 23262 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| |||||||||||||||| || |||| | ||| |||||||| Sbjct: 51932 tactccctccgttcctaaatataagtctttctagagattctaacaagcgactacatacat 51873 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgt 198 || ||||||| ||||||||| |||||| ||||||||| ||||||||||||| Sbjct: 51872 agtaaaatgaatgaatctatactctaaaatatgtctatgtacatccgtatgt 51821 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcacta 131 |||| |||||||| |||||||||||||||| || |||||||||| Sbjct: 23272 tacttcctccgttcctaaatataagtctttgtagagatttcacta 23228 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtctttt 117 |||||| |||||| ||||||||||||||||| Sbjct: 51768 tactccttccgttcctaaatataagtctttt 51798
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 95.6 bits (48), Expect = 1e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 169 tctaaagtatgtctatatacatccgtatgtagtccactagtgaaatctttacaaagacgt 228 ||||||||||||||||||||||||||||||||||| ||||||||| | || |||||| | Sbjct: 52393 tctaaagtatgtctatatacatccgtatgtagtcccctagtgaaacatctaaaaagactt 52452 Query: 229 atatttaggaac 240 |||||||||||| Sbjct: 52453 atatttaggaac 52464 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| ||||||||||||||||| || | ||||| ||| |||||||||||| Sbjct: 57344 tactccctccgttcctaaatataagtctttttagaggtttcattaaaaatctacatacgg 57403 Query: 147 a 147 | Sbjct: 57404 a 57404 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| ||||||||||||||||| || |||||||| || |||||||||| Sbjct: 52474 tactccctccgttcctaaatataagtctttttagatgtttcactaggggactacatacgg 52415 Query: 147 a 147 | Sbjct: 52414 a 52414 Score = 56.0 bits (28), Expect = 1e-04 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 89 ctccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacggag 148 ||||||||||| ||||||| |||||||||||| ||||| |||| || ||||||||| | Sbjct: 69794 ctccctccgtttctaaata-aagtcttttaagagattttactagcgaactacatacgaaa 69736 Query: 149 caaaatgatcgaatctatattctaaagtatgtctatatac 188 ||||||| ||| || | ||||||||||||||| |||| Sbjct: 69735 taaaatgaataaatttacactctaaagtatgtctacatac 69696
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/156 (84%), Gaps = 3/156 (1%) Strand = Plus / Plus Query: 86 gtactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacg 145 |||||||||||||| ||||||| ||||| ||| | |||||||||| || ||||||||| Sbjct: 7401 gtactccctccgttcctaaatacaagtccttttaaagatttcactataga-ctacatacg 7459 Query: 146 gagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccac 205 |||||||||| |||||| ||||||||||||| |||||||||| |||||||||||| Sbjct: 7460 aagcaaaatgagttaatctacattctaaagtatggttatatacatctgtatgtagtcca- 7518 Query: 206 tagtgaaatct-ttacaaagacgtatatttaggaac 240 ||||| ||||| | |||||| ||||||||||||| Sbjct: 7519 tagtggaatctcaaaaaaagacttatatttaggaac 7554 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtctttt 117 ||||||||||||| ||||||||||||||||| Sbjct: 7564 tactccctccgttcctaaatataagtctttt 7534 Score = 42.1 bits (21), Expect = 1.5 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 192 cgtatgtagtccactagtgaaatctttacaaagacgtatatttaggaac 240 ||||||||||| | |||||||||||||| || ||| | ||||||||||| Sbjct: 7459 cgtatgtagtcta-tagtgaaatctttaaaaggacttgtatttaggaac 7412
>ref|XM_506982.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E03.33 mRNA Length = 1676 Score = 89.7 bits (45), Expect = 7e-15 Identities = 144/177 (81%) Strand = Plus / Minus Query: 277 cacgtcgcggatcaactcgtcgaagttgcggcgagaagagccgccgggttcagtcgcctt 336 ||||| ||||| || ||| |||||||||||| |||| ||||||||||| | || |||| | Sbjct: 1513 cacgtggcggaccagctcttcgaagttgcggtgagacgagccgccgggcttagccgccct 1454 Query: 337 gaccgctttctccctccactcccgcgccttcttcttcatcaccttcccgctctccccttc 396 || ||| ||||||||||||||| ||||||| || ||||| ||||||| ||| ||||| Sbjct: 1453 gatcgccttctccctccactcctccgccttcctcctcatctccttccccttctgaccttc 1394 Query: 397 catgacctccgtgatatggtccgcgatggcgtcgcgccggacgttgccgtcgatctc 453 ||||| ||| | ||| || ||||| |||| ||||| |||||||| ||||||||| Sbjct: 1393 catgagctcagcgatgaggcacgcgacggcgccgcgcttgacgttgctgtcgatctc 1337
>ref|XM_467869.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1659 Score = 89.7 bits (45), Expect = 7e-15 Identities = 144/177 (81%) Strand = Plus / Minus Query: 277 cacgtcgcggatcaactcgtcgaagttgcggcgagaagagccgccgggttcagtcgcctt 336 ||||| ||||| || ||| |||||||||||| |||| ||||||||||| | || |||| | Sbjct: 1516 cacgtggcggaccagctcttcgaagttgcggtgagacgagccgccgggcttagccgccct 1457 Query: 337 gaccgctttctccctccactcccgcgccttcttcttcatcaccttcccgctctccccttc 396 || ||| ||||||||||||||| ||||||| || ||||| ||||||| ||| ||||| Sbjct: 1456 gatcgccttctccctccactcctccgccttcctcctcatctccttccccttctgaccttc 1397 Query: 397 catgacctccgtgatatggtccgcgatggcgtcgcgccggacgttgccgtcgatctc 453 ||||| ||| | ||| || ||||| |||| ||||| |||||||| ||||||||| Sbjct: 1396 catgagctcagcgatgaggcacgcgacggcgccgcgcttgacgttgctgtcgatctc 1340
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 89.7 bits (45), Expect = 7e-15 Identities = 144/177 (81%) Strand = Plus / Minus Query: 277 cacgtcgcggatcaactcgtcgaagttgcggcgagaagagccgccgggttcagtcgcctt 336 ||||| ||||| || ||| |||||||||||| |||| ||||||||||| | || |||| | Sbjct: 31826150 cacgtggcggaccagctcttcgaagttgcggtgagacgagccgccgggcttagccgccct 31826091 Query: 337 gaccgctttctccctccactcccgcgccttcttcttcatcaccttcccgctctccccttc 396 || ||| ||||||||||||||| ||||||| || ||||| ||||||| ||| ||||| Sbjct: 31826090 gatcgccttctccctccactcctccgccttcctcctcatctccttccccttctgaccttc 31826031 Query: 397 catgacctccgtgatatggtccgcgatggcgtcgcgccggacgttgccgtcgatctc 453 ||||| ||| | ||| || ||||| |||| ||||| |||||||| ||||||||| Sbjct: 31826030 catgagctcagcgatgaggcacgcgacggcgccgcgcttgacgttgctgtcgatctc 31825974 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 81 agctagtactccctccgttactaaatat 108 ||||||||||||||||||| |||||||| Sbjct: 21041194 agctagtactccctccgtttctaaatat 21041167 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 78 actagctagtactccctccgtt 99 |||||||||||||||||||||| Sbjct: 27832713 actagctagtactccctccgtt 27832734 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 tactccctccgttactaaata 107 ||||||||||||||||||||| Sbjct: 31764443 tactccctccgttactaaata 31764423 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 |||||||||||||||| |||||||| Sbjct: 23176207 tactccctccgttacttaatataag 23176231 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 17964593 tagtactccctccgtttctaaatat 17964569 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 17875442 tagtactccctccgtttctaaatat 17875418 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 10956533 tactccctccgttcctaaatataag 10956557 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 7535085 tagtactccctccgttcctaaatat 7535109 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 83 ctagtactccctccgttactaaatataa 110 ||||||||||||||||| | |||||||| Sbjct: 30594406 ctagtactccctccgttccaaaatataa 30594379 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 tctccctccactcccgcgccttct 368 ||||||||||||||| |||||||| Sbjct: 26342268 tctccctccactccctcgccttct 26342291 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 83 ctagtactccctccgttactaaatataa 110 ||||||||||||||||| ||||||||| Sbjct: 13198160 ctagtactccctccgttcgtaaatataa 13198187
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 89.7 bits (45), Expect = 7e-15 Identities = 144/177 (81%) Strand = Plus / Minus Query: 277 cacgtcgcggatcaactcgtcgaagttgcggcgagaagagccgccgggttcagtcgcctt 336 ||||| ||||| || ||| |||||||||||| |||| ||||||||||| | || |||| | Sbjct: 121948 cacgtggcggaccagctcttcgaagttgcggtgagacgagccgccgggcttagccgccct 121889 Query: 337 gaccgctttctccctccactcccgcgccttcttcttcatcaccttcccgctctccccttc 396 || ||| ||||||||||||||| ||||||| || ||||| ||||||| ||| ||||| Sbjct: 121888 gatcgccttctccctccactcctccgccttcctcctcatctccttccccttctgaccttc 121829 Query: 397 catgacctccgtgatatggtccgcgatggcgtcgcgccggacgttgccgtcgatctc 453 ||||| ||| | ||| || ||||| |||| ||||| |||||||| ||||||||| Sbjct: 121828 catgagctcagcgatgaggcacgcgacggcgccgcgcttgacgttgctgtcgatctc 121772 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 tactccctccgttactaaata 107 ||||||||||||||||||||| Sbjct: 60241 tactccctccgttactaaata 60221
>dbj|AK104985.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F12, full insert sequence Length = 1677 Score = 89.7 bits (45), Expect = 7e-15 Identities = 144/177 (81%) Strand = Plus / Minus Query: 277 cacgtcgcggatcaactcgtcgaagttgcggcgagaagagccgccgggttcagtcgcctt 336 ||||| ||||| || ||| |||||||||||| |||| ||||||||||| | || |||| | Sbjct: 1513 cacgtggcggaccagctcttcgaagttgcggtgagacgagccgccgggcttagccgccct 1454 Query: 337 gaccgctttctccctccactcccgcgccttcttcttcatcaccttcccgctctccccttc 396 || ||| ||||||||||||||| ||||||| || ||||| ||||||| ||| ||||| Sbjct: 1453 gatcgccttctccctccactcctccgccttcctcctcatctccttccccttctgaccttc 1394 Query: 397 catgacctccgtgatatggtccgcgatggcgtcgcgccggacgttgccgtcgatctc 453 ||||| ||| | ||| || ||||| |||| ||||| |||||||| ||||||||| Sbjct: 1393 catgagctcagcgatgaggcacgcgacggcgccgcgcttgacgttgctgtcgatctc 1337
>dbj|AK073587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052B15, full insert sequence Length = 1659 Score = 89.7 bits (45), Expect = 7e-15 Identities = 144/177 (81%) Strand = Plus / Minus Query: 277 cacgtcgcggatcaactcgtcgaagttgcggcgagaagagccgccgggttcagtcgcctt 336 ||||| ||||| || ||| |||||||||||| |||| ||||||||||| | || |||| | Sbjct: 1516 cacgtggcggaccagctcttcgaagttgcggtgagacgagccgccgggcttagccgccct 1457 Query: 337 gaccgctttctccctccactcccgcgccttcttcttcatcaccttcccgctctccccttc 396 || ||| ||||||||||||||| ||||||| || ||||| ||||||| ||| ||||| Sbjct: 1456 gatcgccttctccctccactcctccgccttcctcctcatctccttccccttctgaccttc 1397 Query: 397 catgacctccgtgatatggtccgcgatggcgtcgcgccggacgttgccgtcgatctc 453 ||||| ||| | ||| || ||||| |||| ||||| |||||||| ||||||||| Sbjct: 1396 catgagctcagcgatgaggcacgcgacggcgccgcgcttgacgttgctgtcgatctc 1340
>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant Length = 4946 Score = 87.7 bits (44), Expect = 3e-14 Identities = 87/100 (87%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 141 atacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtag 200 |||||||||||||||| ||||||||| |||||| | ||||||||||||||||||||||| Sbjct: 1140 atacggagcaaaatgagtgaatctatactctaaaatgtgtctatatacatccgtatgtag 1081 Query: 201 tccactagtgaaatctttacaaagacgtatatttaggaac 240 | || |||| |||||| || || | | ||||||||||||| Sbjct: 1080 ttca-tagtaaaatctctagaaggtcttatatttaggaac 1042 Score = 61.9 bits (31), Expect = 2e-06 Identities = 89/106 (83%), Gaps = 3/106 (2%) Strand = Plus / Minus Query: 137 ctacatacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatcc--gt 194 ||||||||||| |||||||| |||| |||||| |||| |||| |||||||||||| | Sbjct: 1331 ctacatacggaacaaaatgagtgaatgtatattttaaaatatgactatatacatccatat 1272 Query: 195 atgtagtccactagtgaaatctttacaaagacgtatatttaggaac 240 || ||||||| ||||| |||||||| || | | ||||||||||||| Sbjct: 1271 atatagtcca-tagtgtaatctttaaaaggtcttatatttaggaac 1227 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 86 gtactccctccgttactaaatataag 111 |||||||||||||| ||||||||||| Sbjct: 1031 gtactccctccgttcctaaatataag 1056
>gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme IIa gene, complete cds Length = 11475 Score = 85.7 bits (43), Expect = 1e-13 Identities = 129/155 (83%), Gaps = 7/155 (4%) Strand = Plus / Minus Query: 86 gtactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacg 145 |||||||||||||| |||||||||||||| | || |||||||||| ||| ||||||||| Sbjct: 8724 gtactccctccgttcctaaatataagtctctgtagagatttcactatgga-ctacatacg 8666 Query: 146 gagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccac 205 |||||||||| ||||||| | |||||| | ||||||||| ||||| ||||| Sbjct: 8665 aagcaaaatgagtgaatctacactctaaaatgcatctatatac-----tatgtggtcca- 8612 Query: 206 tagtgaaatctttacaaagacgtatatttaggaac 240 ||||| ||||| ||||||||| ||||||||||||| Sbjct: 8611 tagtggaatctctacaaagacttatatttaggaac 8577 Score = 58.0 bits (29), Expect = 3e-05 Identities = 45/49 (91%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 192 cgtatgtagtccactagtgaaatctttacaaagacgtatatttaggaac 240 ||||||||||||| ||||||||||| |||| |||| ||||||||||||| Sbjct: 8666 cgtatgtagtcca-tagtgaaatctctacagagacttatatttaggaac 8713 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttt 116 ||||||||||||| |||||||||||||||| Sbjct: 8567 tactccctccgttcctaaatataagtcttt 8596
>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds Length = 10847 Score = 83.8 bits (42), Expect = 5e-13 Identities = 129/158 (81%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| |||||||| |||||| | ||||||| ||| |||||||||| Sbjct: 7867 tactccctccgttcctaaatatttgtctttataaagatttcaacaagtgactacatacgg 7808 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 |||||||||| ||||||| | |||||| | ||||||||||||||||||||| || | Sbjct: 7807 agcaaaatgagtgaatctacactctaaaatgtgtctatatacatccgtatgtggtaacca 7748 Query: 207 agtgaaatctttacaaagacgtatatttaggaacagag 244 |||||||| || |||||| |||||||||||||||| Sbjct: 7747 tttgaaatctctagaaagacaaatatttaggaacagag 7710 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 209 tgaaatctttacaaagacgtatatttaggaac 240 ||||||||||| |||||| |||||||||||| Sbjct: 7826 tgaaatctttataaagacaaatatttaggaac 7857
>gb|AF536819.1| Triticum aestivum ADP glucose pyrophosphorylase gene, partial cds, alternatively spliced Length = 2512 Score = 83.8 bits (42), Expect = 5e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| ||||||||| |||||| || ||||||| ||| ||| |||||| Sbjct: 383 tactccctccgttcctaaatataggtctttgtagagatttcaacaagtgactatatacgg 442 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtat 196 |||||||||| ||||||| | |||||| || |||||||||||||||||| Sbjct: 443 agcaaaatgagtgaatctacactctaaaatacgtctatatacatccgtat 492 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 209 tgaaatctttacaaagacgtatatttaggaac 240 |||||||| ||||||||| ||||||||||||| Sbjct: 424 tgaaatctctacaaagacctatatttaggaac 393
>gb|AF108008.1|AF108008 Hordeum vulgare HV1LRR1 (HV1LRR1) gene, complete cds Length = 5163 Score = 83.8 bits (42), Expect = 5e-13 Identities = 89/104 (85%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 137 ctacatacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtat 196 ||||||||||| |||||||| ||||||||| ||||| | ||||||||||||||||||| Sbjct: 3892 ctacatacggaacaaaatgagtgaatctatactctaavatgtgtctatatacatccgtat 3951 Query: 197 gtagtccactagtgaaatctttacaaagacgtatatttaggaac 240 ||||| || ||||| ||||| || || | | ||||||||||||| Sbjct: 3952 gtagttca-tagtggaatctctagaaggtcttatatttaggaac 3994
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 79.8 bits (40), Expect = 7e-12 Identities = 129/157 (82%), Gaps = 5/157 (3%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 |||||||||| || |||||||| |||||| || ||||||| ||| |||||||||| Sbjct: 70117 tactccctccattcctaaatatttgtctttctagagatttcaacaagtgactacatacgg 70058 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgt---agtcc 203 |||||||||| ||||||| | |||||| ||||||||||||||||| ||||| ||||| Sbjct: 70057 agcaaaatgagtgaatctacactctaaaatatgtctatatacatccatatgtggtagtcc 69998 Query: 204 actagtgaaatctttacaaagacgtatatttaggaac 240 | | |||||||| || |||||| |||||||||||| Sbjct: 69997 att--tgaaatctctaaaaagacaaatatttaggaac 69963 Score = 46.1 bits (23), Expect = 0.099 Identities = 38/43 (88%) Strand = Plus / Plus Query: 86 gtactccctccgttactaaatataagtcttttaagcgatttca 128 |||||||||||||| |||||||| ||||||| || ||||||| Sbjct: 69952 gtactccctccgttcctaaatatttgtctttttagagatttca 69994
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 79.8 bits (40), Expect = 7e-12 Identities = 132/161 (81%), Gaps = 5/161 (3%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| | ||||||||||||| || | ||||| ||| |||||||||| Sbjct: 50076 tactccctccgttccataatataagtctttctagaggtttcaacaagtgactacatacgg 50017 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgt---agtcc 203 |||||||||| ||||||| | |||||| |||||||| || ||||||||||| ||||| Sbjct: 50016 agcaaaatgagtgaatctacactctaaaatatgtctacatgcatccgtatgttgtagtcc 49957 Query: 204 actagtgaaatctttacaaagacgtatatttaggaacagag 244 | | |||||| | || |||||| ||||||||||||||||| Sbjct: 49956 att--tgaaatgtctaaaaagacttatatttaggaacagag 49918 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 86 gtactccctccgttactaaatataagtctttt 117 |||||||||| ||| ||||||||||||||||| Sbjct: 49911 gtactccctctgttcctaaatataagtctttt 49942
>gb|AY642925.1| Hordeum vulgare BAC 124C9, complete sequence Length = 12258 Score = 79.8 bits (40), Expect = 7e-12 Identities = 94/112 (83%) Strand = Plus / Minus Query: 102 taaatataagtcttttaagcgatttcactaaggatctacatacggagcaaaatgatcgaa 161 ||||||||||||||||||| |||| | || |||| ||||| | |||||| | ||| Sbjct: 3896 taaatataagtcttttaagatattttattagaagtctatatacgaaacaaaataaatgaa 3837 Query: 162 tctatattctaaagtatgtctatatacatccgtatgtagtccactagtgaaa 213 |||||| | |||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 3836 tctatactttaaaatatgtctatatacatccgtatgtagtccactaatgaaa 3785
>dbj|D50641.1| Hordeum vulgare DNA for plant metallothionein-like protein, complete cds Length = 1819 Score = 77.8 bits (39), Expect = 3e-11 Identities = 128/155 (82%), Gaps = 2/155 (1%) Strand = Plus / Plus Query: 86 gtactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacg 145 |||||||||||||| ||||||||||||||| | ||||| | || | | ||||||| | Sbjct: 317 gtactccctccgtttttaaatataagtctttataaagattttattatgaa-ctacatatg 375 Query: 146 gagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccac 205 ||||||||||| || | |||| |||| ||||||||||||||||||||| |||| || Sbjct: 376 aagcaaaatgattgattttatacattaaaatatgtctatatacatccgtatatagttca- 434 Query: 206 tagtgaaatctttacaaagacgtatatttaggaac 240 ||||||||| ||| |||||| ||||||||||||| Sbjct: 435 tagtgaaatttttgtaaagacttatatttaggaac 469
>emb|X81368.1|TAAWJL175 T.aestivumn (subclone pAWJL175) AWJL175 gene Length = 2374 Score = 75.8 bits (38), Expect = 1e-10 Identities = 91/107 (85%), Gaps = 5/107 (4%) Strand = Plus / Minus Query: 137 ctacatacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtat 196 |||||||||||||||||||| ||||||| | |||||| ||||||||||||||| ||||| Sbjct: 2354 ctacatacggagcaaaatgagtgaatctacactctaaaatatgtctatatacattcgtat 2295 Query: 197 gt---agtccactagtgaaatctttacaaagacgtatatttaggaac 240 || |||||| | |||||||| || |||||| |||||||||||| Sbjct: 2294 gtggtagtccatt--tgaaatctctaaaaagacaaatatttaggaac 2250 Score = 46.1 bits (23), Expect = 0.099 Identities = 38/43 (88%) Strand = Plus / Plus Query: 86 gtactccctccgttactaaatataagtcttttaagcgatttca 128 |||||||||||||| |||||||| ||||||| || ||||||| Sbjct: 2239 gtactccctccgttcctaaatatttgtctttttagagatttca 2281
>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds Length = 12034 Score = 71.9 bits (36), Expect = 2e-09 Identities = 99/118 (83%), Gaps = 4/118 (3%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||| ||| || ||||||||| ||| || |||| ||||| ||| ||| |||||| Sbjct: 3562 tactccctcggttccttaatataagtatttctagagattccactatgga-ctatatacgg 3620 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtcca 204 |||||||||| ||| ||| | | |||||||||||||||||||||||||||||||| Sbjct: 3621 agcaaaatgagtgaacctacact---aagtatgtctatatacatccgtatgtagtcca 3675 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 86 gtactccctccgttactaaatataagtctttt 117 |||||||||||||| ||||||| ||||||||| Sbjct: 3721 gtactccctccgttcctaaatacaagtctttt 3690
>gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) pseudogene, complete cds Length = 15688 Score = 71.9 bits (36), Expect = 2e-09 Identities = 125/152 (82%), Gaps = 2/152 (1%) Strand = Plus / Minus Query: 91 ccctccgttactaaatataagtcttttaagcgatttca-ctaaggatctacatacggagc 149 ||||||||| ||||||||||||||||| | |||||| | |||| ||| |||| || | Sbjct: 8882 ccctccgttcctaaatataagtcttttcaaacatttcaaccaagggactatatacagaac 8823 Query: 150 aaaatgatcgaatctatattctaaagtatgtctat-atacatccgtatgtagtccactag 208 ||||||| || ||||| | |||| ||||||||| ||||||||||||||||| | ||| Sbjct: 8822 aaaatgagtaaacctatactttaaaatatgtctatgatacatccgtatgtagtttaatag 8763 Query: 209 tgaaatctttacaaagacgtatatttaggaac 240 || ||||| || |||||| ||||||||||||| Sbjct: 8762 tggaatctctaaaaagacttatatttaggaac 8731 Score = 52.0 bits (26), Expect = 0.002 Identities = 82/98 (83%), Gaps = 2/98 (2%) Strand = Plus / Minus Query: 141 atacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtag 200 ||||||| |||||||| ||||||| | |||||| ||||||||||| ||||| |||||| Sbjct: 15162 atacggaacaaaatgaatgaatctacactctaaaatatgtctatatttatccggatgtag 15103 Query: 201 -tccactagtgaaatctttacaaagacgtatatttagg 237 | ||| | ||||||||| ||||||||||||||||| Sbjct: 15102 tttttcta-taaaatctttaaaaagacgtatatttagg 15066 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcacta 131 ||||||||| ||| ||||||||||||||||| || |||| ||||| Sbjct: 8721 tactccctcagttcctaaatataagtctttttagagattccacta 8765
>gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, complete cds Length = 11462 Score = 71.9 bits (36), Expect = 2e-09 Identities = 61/68 (89%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 173 aagtatgtctatatacatccgtatgtagtccactagtgaaatctttacaaagacgtatat 232 |||||||||||||||||||||||||||||||| ||||| ||| | | |||||| ||||| Sbjct: 3584 aagtatgtctatatacatccgtatgtagtcca-tagtggaatgtcgaaaaagacttatat 3642 Query: 233 ttaggaac 240 |||||||| Sbjct: 3643 ttaggaac 3650 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 86 gtactccctccgttactaaatataagtctttt 117 |||||||||||||| ||||||||||||||||| Sbjct: 3661 gtactccctccgttcctaaatataagtctttt 3630
>gb|DQ247830.1| Aegilops longissima voucher H6679 disrupted meiotic cDNA 1 (DMC1) gene, partial cds; and Stowaway miniature inverted-repeat transposable element, complete sequence Length = 1170 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 137 ctacatacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtat 196 |||||||||||||||||||| ||||||| | |||||| ||||||| |||||||||||| Sbjct: 968 ctacatacggagcaaaatgagtgaatctacactctaaaacatgtctacatacatccgtat 1027 Query: 197 gt 198 || Sbjct: 1028 gt 1029
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 137 ctacatacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtat 196 |||||||||||||||||||| ||||||| | |||| | |||||||| |||||||||||| Sbjct: 24760 ctacatacggagcaaaatgagtgaatctagactctagaatatgtctacatacatccgtat 24819 Query: 197 gt 198 || Sbjct: 24820 gt 24821
>gb|DQ469712.1| Hordeum vulgare subsp. vulgare serine/threonine kinase-like protein ABC1036 gene, complete cds Length = 29663 Score = 65.9 bits (33), Expect = 1e-07 Identities = 128/160 (80%), Gaps = 6/160 (3%) Strand = Plus / Plus Query: 86 gtactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacg 145 ||||||||||| || |||||| || |||||| || |||| ||||| || ||||||||| Sbjct: 17080 gtactccctccattcctaaatgtatatctttttagagattccactaggggactacatacg 17139 Query: 146 gagcaaaatgatcgaatctatattctaaagtatgtctatatacat------ccgtatgta 199 |||||| ||| ||||||||| | ||||| |||||||||||||| | ||||||| Sbjct: 17140 aagcaaagtgagtgaatctatactttaaagcatgtctatatacatgtacatctgtatgta 17199 Query: 200 gtccactagtgaaatctttacaaagacgtatatttaggaa 239 |||| |||||| || || || |||||| || ||||||||| Sbjct: 17200 gtcccctagtggaacctctaaaaagacttacatttaggaa 17239 Score = 40.1 bits (20), Expect = 6.1 Identities = 41/48 (85%) Strand = Plus / Minus Query: 192 cgtatgtagtccactagtgaaatctttacaaagacgtatatttaggaa 239 |||||||||||| |||||| ||||| || ||||| || ||||||||| Sbjct: 17139 cgtatgtagtcccctagtggaatctctaaaaagatatacatttaggaa 17092
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 150 aaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtc 202 ||||||| |||||||| ||||||| ||||||||||| ||||||||||||||| Sbjct: 167407 aaaatgaatgaatctatcttctaaaatatgtctatattcatccgtatgtagtc 167355 Score = 58.0 bits (29), Expect = 3e-05 Identities = 57/65 (87%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 137 ctacatacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtat 196 |||||||| |||||||||| ||||||||||| |||| |||||||||||||| ||||| Sbjct: 178029 ctacatacaaagcaaaatgagtgaatctatatttaaaag-atgtctatatacattcgtat 178087 Query: 197 gtagt 201 ||||| Sbjct: 178088 gtagt 178092 Score = 46.1 bits (23), Expect = 0.099 Identities = 38/43 (88%) Strand = Plus / Plus Query: 159 gaatctatattctaaagtatgtctatatacatccgtatgtagt 201 ||||||||||| |||| ||||||||||||| || |||| |||| Sbjct: 177894 gaatctatattttaaaatatgtctatatacgtcagtatctagt 177936 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 178140 tactccctccgttcctaaatataag 178116
>gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-glucanohydrolase (Glb 2) gene, intron 1 Length = 5159 Score = 65.9 bits (33), Expect = 1e-07 Identities = 92/109 (84%), Gaps = 2/109 (1%) Strand = Plus / Plus Query: 91 ccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacggagca 150 |||||| || ||||||||||| |||| || ||||||| || | ||||||||| |||| Sbjct: 1203 ccctccttttctaaatataaggttttttagagatttcattaggagactacatacgaagca 1262 Query: 151 aaatgatcgaatctatattctaaagtatgtctatatacatccgtatgta 199 ||||||| |||| |||| | |||||| |||||||||||||||||||||| Sbjct: 1263 aaatgat-gaat-tataatttaaagtgtgtctatatacatccgtatgta 1309
>emb|Y10814.1|HVPRP4 H.vulgare mRNA for pathogenic related protein 4 Length = 728 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 86 gtactccctccgttactaaatataagtcttttaagcgatttcactaag 133 ||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 637 gtactccctccgtatctaaatataagtcttttaagatatttcactaag 684
>emb|X68288.1|TAECPRO T.aestivum gene for EC protein Length = 3065 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 137 ctacatacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtat 196 |||||||||||||||||||| ||||||||| | |||| |||||||| || |||||| || Sbjct: 1811 ctacatacggagcaaaatgaatgaatctatactttaaaatatgtctacatgcatccgcat 1752 Query: 197 gta 199 ||| Sbjct: 1751 gta 1749
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 137 ctacatacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatc 191 ||||||||||| |||||||| ||||||| | |||||| |||||||||||||||| Sbjct: 172968 ctacatacggaacaaaatgagtgaatctacactctaaattatgtctatatacatc 173022
>emb|X99705.1|TAPALGEN1 T.aestivum PAL gene Length = 3444 Score = 60.0 bits (30), Expect = 7e-06 Identities = 97/117 (82%), Gaps = 3/117 (2%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcacta-aggatctacatacg 145 ||||||||| ||| ||||||||||||| |||||| |||| |||| ||| ||||| ||| Sbjct: 52 tactccctctgtttctaaatataagtcctttaagaaattttactatagg--ctacacacg 109 Query: 146 gagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtc 202 | ||||||| | |||||||||||||||| | ||||||||| ||||| ||| |||| Sbjct: 110 gggcaaaataaatgaatctatattctaaaagacgtctatatatatccgaatgcagtc 166
>gb|DQ247831.1| Aegilops sharonensis voucher H6680 disrupted meiotic cDNA 1 (DMC1) gene, partial cds; and Stowaway miniature inverted-repeat transposable element, complete sequence Length = 1170 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 137 ctacatacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtat 196 |||||||||||||||||||| ||||||| | |||||| ||||||| ||||||| |||| Sbjct: 968 ctacatacggagcaaaatgagtgaatctacactctaaaacatgtctacatacatctgtat 1027 Query: 197 gt 198 || Sbjct: 1028 gt 1029
>gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcription factor SLN1 gene, complete cds Length = 4098 Score = 60.0 bits (30), Expect = 7e-06 Identities = 126/154 (81%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||||||| ||||||||||| | ||| || |||| ||||| || ||| |||| Sbjct: 703 tactccctccgttcctaaatataagaccttttagagattacactataga-ctaggtacga 761 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtccact 206 |||||||||| ||||||| || ||||| |||| ||| ||| ||||||||||||| || | Sbjct: 762 agcaaaatgagtgaatctacatcctaaaatatgactacata-atccgtatgtagttca-t 819 Query: 207 agtgaaatctttacaaagacgtatatttaggaac 240 |||| ||||| || || | | ||||||||||||| Sbjct: 820 agtggaatctctaaaatgtcttatatttaggaac 853
>gb|AF277239.1|AF277239 Heteranthelium piliferum isolate H5557 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1293 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 137 ctacatacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtat 196 ||||||||| || ||||||| |||||| | |||||| ||||||||||||||||||||| Sbjct: 1030 ctacatacgaagtaaaatgagttaatctacactctaaaatatgtctatatacatccgtat 971 Query: 197 gt 198 || Sbjct: 970 gt 969
>gb|AF182197.1|AF182197 Hordeum vulgare RNase S-like protein precursor (rsh1) gene, complete cds Length = 3758 Score = 60.0 bits (30), Expect = 7e-06 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 159 gaatctatattctaaagtatgtctatatacatccgtatgtagtccactagtgaaatcttt 218 ||||||| | |||||| ||||||||||||||||||||| |||||| ||||| ||||||| Sbjct: 2065 gaatctacaatctaaaatatgtctatatacatccgtatatagtcc-gtagtggaatcttt 2123 Query: 219 acaaagacgtatat 232 | ||| || ||||| Sbjct: 2124 aaaaatacttatat 2137
>emb|AJ459252.1|TAE459252 Triticum aestivum TAA1b gene for fatty acyl coA reductase Length = 4308 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 137 ctacatacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtat 196 |||||||| || ||||||| |||||||||||||||| |||||||| |||||||| ||| Sbjct: 1020 ctacatacagaataaaatgaatgaatctatattctaaaatatgtctacatacatccatat 1079 Query: 197 gt 198 || Sbjct: 1080 gt 1081 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtctttt 117 ||||||||||||| |||||||||||| |||| Sbjct: 1134 tactccctccgttcctaaatataagtttttt 1104
>gb|AY133250.1|AY133250S1 Hordeum vulgare subsp. vulgare starch synthase II gene, exons 1 through 8 Length = 4976 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 169 tctaaagtatgtctatatacatccgtatgtagt 201 |||||||||||| |||||||||||||||||||| Sbjct: 2288 tctaaagtatgtttatatacatccgtatgtagt 2256 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatataagtctttt 117 ||||||| ||||| || ||||||||||||||||| Sbjct: 2205 tagtactgcctccattcctaaatataagtctttt 2238
>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence Length = 77136 Score = 58.0 bits (29), Expect = 3e-05 Identities = 96/116 (82%), Gaps = 3/116 (2%) Strand = Plus / Plus Query: 88 actccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgga 147 |||||||||||| ||||||||||| ||||| || | || | || ||| ||||||||||| Sbjct: 56779 actccctccgttcctaaatataagccttttcagagtttccgatatgga-ctacatacgga 56837 Query: 148 gcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtcc 203 ||||||||| ||||||| | |||||| || | | |||||||| ||||||||||| Sbjct: 56838 gcaaaatgagtgaatctacactctaaaatacgac--tatacatctgtatgtagtcc 56891 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 102 taaatataagtcttttaagcgatttcactaaggatctacatacggagcaaaatgatcgaa 161 ||||||||| |||||| || |||||||| || | || |||| |||||| |||| ||| Sbjct: 60034 taaatataaatctttttagatgtttcactaggggtttatatacagagcaacatgagtgaa 59975 Query: 162 tctatattctaaagtatgtctatatacatccgtatgtagt 201 | |||| |||||| ||||||||||||||| | |||||||| Sbjct: 59974 tttatactctaaattatgtctatatacattcatatgtagt 59935 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataa 110 ||||||||||||| |||||||||| Sbjct: 56938 tactccctccgtttctaaatataa 56915
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtctttta 118 ||||||||||||| |||||||||||||||||| Sbjct: 148724 tactccctccgttcctaaatataagtctttta 148693 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 159 gaatctatattctaaagtatgtctatatacat 190 ||||||||| | |||| ||||||||||||||| Sbjct: 148634 gaatctataatttaaactatgtctatatacat 148665
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 137 ctacatacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtat 196 ||||||||||| |||||||| ||||||| ||| |||| |||||||| |||||| ||||| Sbjct: 355558 ctacatacggaacaaaatgaatgaatctacattttaaaatatgtctacatacattcgtat 355617 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatataagtcttttaagcgatttca 128 |||||| || |||||| ||||||||||||||||| || ||||||| Sbjct: 260155 tagtacaccttccgttcctaaatataagtctttttagagatttca 260199 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtctttt 117 ||||||||| |||||||||||||||| |||| Sbjct: 336064 tactccctctgttactaaatataagtatttt 336094 Score = 46.1 bits (23), Expect = 0.099 Identities = 42/47 (89%), Gaps = 1/47 (2%) Strand = Plus / Minus Query: 194 tatgtagtccactagtgaaatctttacaaagacgtatatttaggaac 240 ||||||||||| || |||||||| || |||||| ||||||||||||| Sbjct: 260213 tatgtagtcca-tattgaaatctctaaaaagacttatatttaggaac 260168 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 159 gaatctatattctaaagtatgtctatatacatccgtatgtagtc 202 ||||||| | |||||| || ||| ||||| |||||||||||||| Sbjct: 336154 gaatctacactctaaaatacgtccatatatatccgtatgtagtc 336111
>gb|AF181459.1|AF181459 Hordeum vulgare dehydrin (Dhn9) gene, complete cds Length = 1791 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtct 114 |||||||||||||||||||||||||||| Sbjct: 1515 tactccctccgttactaaatataagtct 1542
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtctttt 117 |||||||||||||||||||||||||| |||| Sbjct: 41447 tactccctccgttactaaatataagtatttt 41477
>emb|AJ507395.1|HVU507395 Hordeum vulgare subsp. vulgare rpoT gene for DNA-directed RNA polymerase, chloroplast precursor, exons 1-19 Length = 10573 Score = 54.0 bits (27), Expect = 4e-04 Identities = 93/115 (80%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 |||| |||||||| | ||||||||| | ||| || ||||||| ||| |||||||||| Sbjct: 10549 tactacctccgtttcaaaatataagaccttttagagatttcattaaaagactacatacgg 10490 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtagt 201 |||||||||| ||||||| | | || | ||||||||| |||||| |||||||| Sbjct: 10489 agcaaaatgagtgaatctacactttagaatatgtctatgtacatctatatgtagt 10435 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 10387 tactccctccgttcctaaatataag 10411
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtctttt 117 |||||||||||||||||||||||||| |||| Sbjct: 20310814 tactccctccgttactaaatataagtatttt 20310844 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 29822714 tagtactccctccgtttctaaatat 29822738 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 ctagctagtactccctccgtt 99 ||||||||||||||||||||| Sbjct: 15968470 ctagctagtactccctccgtt 15968450 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 81 agctagtactccctccgttactaaatat 108 ||||||||||||||||||| | |||||| Sbjct: 35045681 agctagtactccctccgtttcaaaatat 35045654 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 82 gctagtactccctccgttactaaatata 109 |||||||||||||||||| | ||||||| Sbjct: 25933811 gctagtactccctccgtttcaaaatata 25933784 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatataag 111 ||||||||||||||| ||||||||||| Sbjct: 20706136 tagtactccctccgtctctaaatataag 20706163
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 137 ctacatacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtat 196 |||||||| ||||||||||| |||||| | | |||| |||||||||||||||||| || Sbjct: 198499 ctacatacagagcaaaatgagtaaatctacactgtaaaatatgtctatatacatccgcat 198558 Query: 197 gt 198 || Sbjct: 198559 gt 198560 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 137 ctacatacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtat 196 |||||||| ||||||||||| |||||| | | |||| |||||||||||||||||| || Sbjct: 44745 ctacatacagagcaaaatgagtaaatctacactgtaaaatatgtctatatacatccgcat 44804 Query: 197 gt 198 || Sbjct: 44805 gt 44806
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 79 ctagctagtactccctccgttactaaatat 108 ||||||||||||||||||||| |||||||| Sbjct: 20909516 ctagctagtactccctccgtttctaaatat 20909545 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 82 gctagtactccctccgttactaaatataag 111 |||||||||||||||||| | ||||||||| Sbjct: 18246250 gctagtactccctccgttccaaaatataag 18246221 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 83 ctagtactccctccgttactaaatataag 111 ||||||||||||||||| | ||||||||| Sbjct: 32726277 ctagtactccctccgttccaaaatataag 32726249 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||||| ||||||||| Sbjct: 30865756 tactccctccgttacaaaatataag 30865732 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 ctagctagtactccctccgtt 99 ||||||||||||||||||||| Sbjct: 27551617 ctagctagtactccctccgtt 27551597 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 364 cttcttcttcatcaccttccc 384 ||||||||||||||||||||| Sbjct: 26087022 cttcttcttcatcaccttccc 26087002 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 757704 tagtactccctccgtttctaaatat 757680 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatataag 111 ||||||||||||||| ||| |||||||| Sbjct: 26367575 tagtactccctccgtcacttaatataag 26367548 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 tagctagtactccctccgtt 99 |||||||||||||||||||| Sbjct: 3180871 tagctagtactccctccgtt 3180852
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 79 ctagctagtactccctccgttactaaatat 108 ||||||||||||||||||||| |||||||| Sbjct: 20902545 ctagctagtactccctccgtttctaaatat 20902574 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 82 gctagtactccctccgttactaaatataag 111 |||||||||||||||||| | ||||||||| Sbjct: 18239791 gctagtactccctccgttccaaaatataag 18239762 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 83 ctagtactccctccgttactaaatataag 111 ||||||||||||||||| | ||||||||| Sbjct: 32816787 ctagtactccctccgttccaaaatataag 32816759 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||||| ||||||||| Sbjct: 30956279 tactccctccgttacaaaatataag 30956255 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 ctagctagtactccctccgtt 99 ||||||||||||||||||||| Sbjct: 27642940 ctagctagtactccctccgtt 27642920 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 364 cttcttcttcatcaccttccc 384 ||||||||||||||||||||| Sbjct: 26178331 cttcttcttcatcaccttccc 26178311 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 757702 tagtactccctccgtttctaaatat 757678 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatataag 111 ||||||||||||||| ||| |||||||| Sbjct: 26458884 tagtactccctccgtcacttaatataag 26458857 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 tagctagtactccctccgtt 99 |||||||||||||||||||| Sbjct: 3180982 tagctagtactccctccgtt 3180963
>gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0008D12 map MAP_LOC, complete sequence Length = 167323 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 79 ctagctagtactccctccgttactaaatat 108 ||||||||||||||||||||| |||||||| Sbjct: 13407 ctagctagtactccctccgtttctaaatat 13378
>gb|AF479764.1| Triticum aestivum glutathione-S-transferase 28e45 mRNA, complete cds Length = 1018 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 169 tctaaagtatgtctatatacatccgtatgt 198 |||||| ||||||||||||||||||||||| Sbjct: 923 tctaaaatatgtctatatacatccgtatgt 894
>gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransferase (HvCOMT) gene, complete cds Length = 5238 Score = 52.0 bits (26), Expect = 0.002 Identities = 97/118 (82%), Gaps = 2/118 (1%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 |||| |||||||| |||||||| ||||||||| ||| |||| ||| |||||||||| Sbjct: 4128 tacttcctccgttcctaaatatttgtcttttaaattttttaactacgga-ctacatacgg 4070 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtctatatac-atccgtatgtagtcc 203 ||||||| || ||| | |||||||| ||||||||||||| || |||||||||||| Sbjct: 4069 agcaaaacgaaggaacttgcattctaaattatgtctatatacgattcgtatgtagtcc 4012
>gb|AF343493.1| Secale cereale clone pla 3-phosphoglycerate kinase (Pgk-1) gene, partial cds; nuclear gene for plastid product Length = 1535 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 89 ctccctccgttactaaatataagtctttt 117 ||||||||||| ||||||||||||||||| Sbjct: 1375 ctccctccgttcctaaatataagtctttt 1347 Score = 50.1 bits (25), Expect = 0.006 Identities = 79/97 (81%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacgg 146 ||||||||| ||| | |||||||||||||| || |||| || ||| |||||||||| Sbjct: 1213 tactccctctgttcccaaatataagtctttctagagattccaacaagtgactacatacgg 1272 Query: 147 agcaaaatgatcgaatctatattctaaagtatgtcta 183 |||||||||| | ||||| | |||||| |||||||| Sbjct: 1273 agcaaaatgagtgtatctacactctaaaatatgtcta 1309
>gb|AF334758.1|AF334758 Hordeum vulgare homeodomain protein JUBEL1 (JuBel1) gene, complete cds Length = 13757 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 192 cgtatgtagtccactagtgaaatctttacaaagacgtatatttaggaac 240 ||||||||||| ||||||||||||||| ||||| ||||||| ||||| Sbjct: 11707 cgtatgtagtctcctagtgaaatctttaagaagacttatattttggaac 11659 Score = 46.1 bits (23), Expect = 0.099 Identities = 89/111 (80%) Strand = Plus / Plus Query: 93 ctccgttactaaatataagtcttttaagcgatttcactaaggatctacatacggagcaaa 152 ||||||| | ||||||||||||| | | |||||||||| | ||||||||| |||||| Sbjct: 11655 ctccgttccaaaatataagtcttcttaaagatttcactaggagactacatacgaagcaaa 11714 Query: 153 atgatcgaatctatattctaaagtatgtctatatacatccgtatgtagtcc 203 |||| ||| || | |||||| | |||||||| |||| ||||||||||| Sbjct: 11715 atgagtaaatttacactctaaattgtgtctataaacatatgtatgtagtcc 11765
>gb|AF189727.1|AF189727 Hordeum vulgare NRT2.3 gene, promoter sequence Length = 1557 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 137 ctacatacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtat 196 |||||||| ||||||||||| ||||||| || |||| |||| |||||||||| ||| | Sbjct: 536 ctacatacagagcaaaatgagtgaatctacatcataaaatatgactatatacatacgtgt 477 Query: 197 gtagt 201 ||||| Sbjct: 476 gtagt 472
>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0059G01, complete sequence Length = 141661 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataa 110 |||||||||||||||||||||||| Sbjct: 32896 tactccctccgttactaaatataa 32873
>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16, complete sequence Length = 159525 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataa 110 |||||||||||||||||||||||| Sbjct: 139668 tactccctccgttactaaatataa 139645
>gb|AC136503.46| Medicago truncatula clone mth2-15n1, complete sequence Length = 117475 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 85 agtactccctccgttactaaatataagt 112 ||||||||||||||| |||||||||||| Sbjct: 71594 agtactccctccgtttctaaatataagt 71567
>gb|AY972629.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG095 cyclic nucleotide-gated ion channel 1 (CNGC1) gene, partial cds Length = 5200 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 88 actccctccgttactaaatataagtcttttaa 119 |||||||| ||| ||||||||||||||||||| Sbjct: 2768 actccctctgttcctaaatataagtcttttaa 2799 Score = 46.1 bits (23), Expect = 0.099 Identities = 36/39 (92%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 206 tagtgaaatctttacaaagacgtatatttaggaacagag 244 ||||| |||||||| |||||| ||||||||||||||||| Sbjct: 2810 tagtggaatcttta-aaagacttatatttaggaacagag 2773
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataa 110 |||||||||||||||||||||||| Sbjct: 3045652 tactccctccgttactaaatataa 3045629 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 85 agtactccctccgttactaaatataag 111 ||||||||||||||||| ||||||||| Sbjct: 24827316 agtactccctccgttacaaaatataag 24827290 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 23958314 tactccctccgttcctaaatataag 23958338 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 17993277 tagtactccctccgtttctaaatat 17993301 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 13828824 tagtactccctccgtttctaaatat 13828800 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 81 agctagtactccctccgttactaaatat 108 |||||||||||||||||| |||||||| Sbjct: 16823180 agctagtactccctccgtccctaaatat 16823207 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 83 ctagtactccctccgttactaaatataa 110 |||||||||||||||| |||||||||| Sbjct: 1623807 ctagtactccctccgtccctaaatataa 1623834
>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_F08 Length = 105979 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 81 agctagtactccctccgttactaaatat 108 ||||||||||||||||||| |||||||| Sbjct: 42939 agctagtactccctccgtttctaaatat 42912
>dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09C23, TM0001, complete sequence Length = 103397 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatataag 111 |||||||||||||||| ||||||||||| Sbjct: 30576 tagtactccctccgttcctaaatataag 30603
>gb|AC113334.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_F01, complete sequence Length = 118799 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 85 agtactccctccgttactaaatataag 111 ||||||||||||||||| ||||||||| Sbjct: 109299 agtactccctccgttacaaaatataag 109273
>gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0013J02, complete sequence Length = 118026 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 85 agtactccctccgttactaaatataag 111 ||||||||||||||||| ||||||||| Sbjct: 14201 agtactccctccgttacaaaatataag 14175
>emb|AJ272313.1|HVU272313 Hordeum vulgare mRNA for gamma tubulin (gtub gene) Length = 2039 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagtctttt 117 |||||| |||||| ||||||||||||||||| Sbjct: 1906 tactccatccgttcctaaatataagtctttt 1936
>gb|AF287726.1|AF287726 Hordeum vulgare clone pFL699 1,4-beta-D xylan xylanohydrolase gene, complete cds Length = 5474 Score = 46.1 bits (23), Expect = 0.099 Identities = 87/107 (81%), Gaps = 1/107 (0%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatataagtcttttaagcgatttcactaaggatctacata 143 |||||||||||||||| |||||||| || | ||| | ||||||| || | ||||||| Sbjct: 533 tagtactccctccgttcctaaatatcaggccttttaaagatttcaatatata-ctacata 475 Query: 144 cggagcaaaatgatcgaatctatattctaaagtatgtctatatacat 190 |||| |||||||| |||| || | ||||| ||||||||||||||| Sbjct: 474 cggaacaaaatgaatgaatgtacacgctaaaatatgtctatatacat 428
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 cactagctagtactccctccgtt 99 ||||||||||||||||||||||| Sbjct: 27591015 cactagctagtactccctccgtt 27590993 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 gtactccctccgttactaaatataag 111 |||||||||||||| ||||||||||| Sbjct: 20360120 gtactccctccgttcctaaatataag 20360095 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 80 tagctagtactccctccgttactaaatat 108 |||||||||||||||||||| | |||||| Sbjct: 27319790 tagctagtactccctccgtttcaaaatat 27319762 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 83 ctagtactccctccgttactaaatataag 111 ||||||||||||||||| | ||||||||| Sbjct: 3387945 ctagtactccctccgttccaaaatataag 3387917 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ctccctccgttactaaatat 108 |||||||||||||||||||| Sbjct: 24315201 ctccctccgttactaaatat 24315220 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaata 107 |||||||||||||||| ||||||| Sbjct: 4313171 tagtactccctccgttcctaaata 4313194
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 cactagctagtactccctccgtt 99 ||||||||||||||||||||||| Sbjct: 73305 cactagctagtactccctccgtt 73283
>gb|AF085168.1|AF085168 Triticum aestivum receptor-like protein kinase pesudogene sequence Length = 3822 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 179 gtctatatacatccgtatgtagtccac 205 |||||||||||||||||| |||||||| Sbjct: 3571 gtctatatacatccgtatctagtccac 3597
>gb|AC154113.1| Medicago truncatula chromosome 2 BAC clone mte1-25a23, complete sequence Length = 42983 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 gtactccctccgttactaaatataag 111 |||||||||||||| ||||||||||| Sbjct: 17767 gtactccctccgtttctaaatataag 17742
>gb|AC147803.2| Oryza sativa chromosome 3 BAC OSJNBb0034P05 genomic sequence, complete sequence Length = 35334 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 82 gctagtactccctccgttactaaatataag 111 |||||||||||||||||| | ||||||||| Sbjct: 30637 gctagtactccctccgttccaaaatataag 30608
>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete sequence Length = 159579 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 82 gctagtactccctccgttactaaatataag 111 |||||||||||||||||| | ||||||||| Sbjct: 12681 gctagtactccctccgttccaaaatataag 12652
>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12 Length = 306650 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 428 tcgcgccggacgttgccgtcgatctc 453 |||||||||||| ||||||||||||| Sbjct: 306060 tcgcgccggacgatgccgtcgatctc 306085
>gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone mte1-30k4, complete sequence Length = 172016 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 gtactccctccgttactaaatataag 111 |||||||||||||| ||||||||||| Sbjct: 123748 gtactccctccgtttctaaatataag 123723
>gb|AC133572.35| Medicago truncatula clone mth2-10o11, complete sequence Length = 108164 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagt 112 ||||||||||||| |||||||||||| Sbjct: 35300 tactccctccgtttctaaatataagt 35325
>gb|AC144375.14| Medicago truncatula clone mth2-11p13, complete sequence Length = 123953 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagt 112 ||||||||||||| |||||||||||| Sbjct: 76105 tactccctccgtttctaaatataagt 76130
>gb|AC145061.27| Medicago truncatula clone mth2-6a18, complete sequence Length = 139522 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagt 112 ||||||||||||| |||||||||||| Sbjct: 122377 tactccctccgtttctaaatataagt 122402
>gb|AC130808.36| Medicago truncatula clone mth2-34k9, complete sequence Length = 113091 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagt 112 |||||||||||||||||| ||||||| Sbjct: 4504 tactccctccgttactaattataagt 4479
>gb|AC135319.28| Medicago truncatula clone mth2-6g4, complete sequence Length = 120194 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataagt 112 ||||||||||||| |||||||||||| Sbjct: 73666 tactccctccgtttctaaatataagt 73691
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaag 120 |||||||||||||| || |||||||| ||||||| Sbjct: 15025429 tactccctccgttattacatataagtattttaag 15025396 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 83 ctagtactccctccgttactaaatat 108 ||||||||||||||||| |||||||| Sbjct: 12656606 ctagtactccctccgtttctaaatat 12656581 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 actagctagtactccctccgt 98 ||||||||||||||||||||| Sbjct: 17024093 actagctagtactccctccgt 17024073 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 13894207 tagtactccctccgtttctaaatat 13894183 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatataag 111 ||||||||||||||| ||||||||||| Sbjct: 17356963 tagtactccctccgtccctaaatataag 17356990
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 79 ctagctagtactccctccgttactaaatat 108 ||||||||||||| ||||||| |||||||| Sbjct: 29050194 ctagctagtactctctccgtttctaaatat 29050165 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 7787939 tagtactccctccgtttctaaatat 7787915 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 actagctagtactccctccgt 98 ||||||||||||||||||||| Sbjct: 6390153 actagctagtactccctccgt 6390173 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 5176367 tagtactccctccgtttctaaatat 5176391 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 agtactccctccgttactaaatat 108 ||||||||||||||| |||||||| Sbjct: 29177439 agtactccctccgtttctaaatat 29177416 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataa 110 |||| ||||||||||||||||||| Sbjct: 27660553 tactacctccgttactaaatataa 27660576 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 tagctagtactccctccgtt 99 |||||||||||||||||||| Sbjct: 5707006 tagctagtactccctccgtt 5706987 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 85 agtactccctccgttactaaatataagt 112 |||||||| |||||| |||||||||||| Sbjct: 4050883 agtactccatccgtttctaaatataagt 4050910
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 79 ctagctagtactccctccgttactaaatat 108 |||||||||||||||||| || |||||||| Sbjct: 11716976 ctagctagtactccctccttttctaaatat 11717005 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 83 ctagtactccctccgttactaaatat 108 ||||||||||||||||| |||||||| Sbjct: 7845912 ctagtactccctccgtttctaaatat 7845937 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 actccctccgttactaaatataag 111 |||||||||||| ||||||||||| Sbjct: 42091242 actccctccgttcctaaatataag 42091219 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataa 110 ||||||||||||| |||||||||| Sbjct: 32108926 tactccctccgtttctaaatataa 32108949 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 agtactccctccgttactaaatat 108 ||||||||||||||| |||||||| Sbjct: 31983009 agtactccctccgtttctaaatat 31983032 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatataag 111 ||||||||||||||| ||||||||||| Sbjct: 31772019 tagtactccctccgtctctaaatataag 31771992 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataa 110 ||||||||||||| |||||||||| Sbjct: 21121686 tactccctccgttcctaaatataa 21121709 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ctagctagtactccctccgt 98 |||||||||||||||||||| Sbjct: 20647191 ctagctagtactccctccgt 20647210 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 actccctccgttactaaatataag 111 |||||||||||| ||||||||||| Sbjct: 11591989 actccctccgttcctaaatataag 11591966 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 tagctagtactccctccgtt 99 |||||||||||||||||||| Sbjct: 6616281 tagctagtactccctccgtt 6616300 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatataag 111 |||||||||||||||| | ||||||||| Sbjct: 4792430 tagtactccctccgttccaaaatataag 4792403 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ctccctccgttactaaatat 108 |||||||||||||||||||| Sbjct: 1783321 ctccctccgttactaaatat 1783302
>dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1066G12 Length = 136263 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 83 ctagtactccctccgttactaaatat 108 ||||||||||||||||| |||||||| Sbjct: 40858 ctagtactccctccgtttctaaatat 40883
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 44.1 bits (22), Expect = 0.39 Identities = 60/70 (85%), Gaps = 2/70 (2%) Strand = Plus / Plus Query: 176 tatgtctatatacatccgtatgtagtccactagtgaaatct-ttacaaagacgtatattt 234 |||||||||||||||| ||||||||| | || |||||||| | | |||||| ||||||| Sbjct: 17251 tatgtctatatacatctttatgtagtcta-tattgaaatctctaaaaaagacttatattt 17309 Query: 235 aggaacagag 244 ||| |||||| Sbjct: 17310 aggtacagag 17319 Score = 40.1 bits (20), Expect = 6.1 Identities = 45/52 (86%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 101 ctaaatataagtcttttaagcgatttcactaaggatctacatacggagcaaa 152 ||||||||||||||||| || |||| || | | || |||||||||||||||| Sbjct: 17182 ctaaatataagtctttttagagattccaat-atgaactacatacggagcaaa 17232
>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H10 Length = 166570 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 79 ctagctagtactccctccgttactaaatat 108 ||||||||||||| ||||||| |||||||| Sbjct: 65181 ctagctagtactctctccgtttctaaatat 65152
>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 79 ctagctagtactccctccgttactaaatat 108 |||||||||||||||||| || |||||||| Sbjct: 56144 ctagctagtactccctccttttctaaatat 56173
>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056L09 Length = 152910 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 86 gtactccctccgttactaaatataag 111 |||||||||||||| ||||||||||| Sbjct: 107868 gtactccctccgttcctaaatataag 107843
>dbj|AP005426.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0668D04 Length = 148848 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaag 120 |||||||||||||| || |||||||| ||||||| Sbjct: 17072 tactccctccgttattacatataagtattttaag 17039
>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0663F07 Length = 159046 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 78 actagctagtactccctccgtt 99 |||||||||||||||||||||| Sbjct: 118046 actagctagtactccctccgtt 118067
>dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701F11 Length = 154950 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataagtcttttaag 120 |||||||||||||| || |||||||| ||||||| Sbjct: 94875 tactccctccgttattacatataagtattttaag 94842
>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0041C07 Length = 179047 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 83 ctagtactccctccgttactaaatat 108 ||||||||||||||||| |||||||| Sbjct: 122544 ctagtactccctccgtttctaaatat 122519
>emb|AJ512944.1|HVU512944 Hordeum vulgare cor14b gene for cold regulated protein Length = 1395 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 86 gtactccctccgttactaaatataag 111 |||||||||||||| ||||||||||| Sbjct: 1368 gtactccctccgtttctaaatataag 1393
>emb|CR962123.2| Medicago truncatula chromosome 5 clone mth2-167a19, COMPLETE SEQUENCE Length = 128818 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 85 agtactccctccgttactaaatataa 110 ||||||||||||||| |||||||||| Sbjct: 53875 agtactccctccgtttctaaatataa 53850
>gb|M60732.1|BLYCLDAA Hordeum vulgare cold-regulated mRNA, 3' end Length = 653 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 86 gtactccctccgttactaaatataag 111 |||||||||||||| ||||||||||| Sbjct: 602 gtactccctccgtttctaaatataag 627
>dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02G18, TM0334a, complete sequence Length = 77969 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 86 gtactccctccgttactaaatataag 111 |||||||||||||| ||||||||||| Sbjct: 40509 gtactccctccgttcctaaatataag 40534 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 40819 tactccctccgttcctaaatataag 40795
>ref|XM_469208.1| Oryza sativa (japonica cultivar-group), mRNA Length = 819 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 364 cttcttcttcatcaccttccc 384 ||||||||||||||||||||| Sbjct: 589 cttcttcttcatcaccttccc 569
>gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece Length = 120562 Score = 42.1 bits (21), Expect = 1.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 141 atacggagcaaaatgatcgaatctatattctaaagtatgtctatatacatccgtatgtag 200 ||||| |||||||||| ||| ||| | | |||| ||||||||||||||| | ||||||| Sbjct: 27491 atacgaagcaaaatgaatgaacctacactttaaattatgtctatatacatacatatgtag 27550 Query: 201 t 201 | Sbjct: 27551 t 27551
>gb|AY020051.1| Oryza sativa microsatellite MRG2376 containing (CT)X16, genomic sequence Length = 232 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 80 tagctagtactccctccgttactaaatat 108 |||||||||||||||||||| | |||||| Sbjct: 150 tagctagtactccctccgtttcaaaatat 178
>gb|AC145388.2| Oryza sativa chromosome 3 BAC OSJNBb0036M02 genomic sequence, complete sequence Length = 125380 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 cttcttcttcatcaccttccc 384 ||||||||||||||||||||| Sbjct: 16064 cttcttcttcatcaccttccc 16084
>gb|AC078891.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0092N12, complete sequence Length = 109198 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 actagctagtactccctccgt 98 ||||||||||||||||||||| Sbjct: 103976 actagctagtactccctccgt 103996
>gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007A06, complete sequence Length = 148029 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 28604 tagtactccctccgtttctaaatat 28628
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 83 ctagtactccctccgttactaaatataag 111 ||||||||||||||||| | ||||||||| Sbjct: 17630 ctagtactccctccgttccaaaatataag 17658
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 26803 tactccctccgttcctaaatataag 26827
>gb|AC137622.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0118N20, complete sequence Length = 146139 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 94896 tagtactccctccgtttctaaatat 94872
>gb|AC135430.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0671E09, complete sequence Length = 158472 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 46326 tagtactccctccgtttctaaatat 46302
>gb|AC146766.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1112E06, complete sequence Length = 177488 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 |||||||||||| |||||||||||| Sbjct: 15067 tactccctccgtcactaaatataag 15091
>gb|AC104845.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0091E08, complete sequence Length = 119526 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 |||||||||||| |||||||||||| Sbjct: 39920 tactccctccgtcactaaatataag 39944
>emb|CR962133.1| Medicago truncatula chromosome 5 clone mth2-17h8, COMPLETE SEQUENCE Length = 114811 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 99793 tactccctccgttcctaaatataag 99817
>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene region Length = 58956 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 54103 tactccctccgttcctaaatataag 54079
>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete sequence Length = 122496 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||||| ||||||||| Sbjct: 77334 tactccctccgttacaaaatataag 77358
>gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genomic sequence, complete sequence Length = 27470 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 ctagctagtactccctccgtt 99 ||||||||||||||||||||| Sbjct: 11157 ctagctagtactccctccgtt 11177
>gb|AC133139.23| Medicago truncatula clone mth1-8d23, complete sequence Length = 121016 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 91312 tactccctccgtttctaaatataag 91288
>gb|AC140023.13| Medicago truncatula clone mth2-32h4, complete sequence Length = 152468 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 65081 tactccctccgtttctaaatataag 65057
>gb|AC153352.19| Medicago truncatula clone mth2-103l4, complete sequence Length = 130178 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 86 gtactccctccgttactaaatataa 110 |||||||||||||| |||||||||| Sbjct: 93089 gtactccctccgtttctaaatataa 93065
>gb|AC161864.9| Medicago truncatula clone mth2-69d21, complete sequence Length = 133324 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 gtactccctccgttactaaatataa 110 |||||||||||||| |||||||||| Sbjct: 88383 gtactccctccgtttctaaatataa 88407
>gb|AC122727.24| Medicago truncatula clone mth2-13b8, complete sequence Length = 128564 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 37252 tactccctccgtttctaaatataag 37276
>gb|AC148348.6| Medicago truncatula clone mth2-28b4, complete sequence Length = 118633 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 23846 tactccctccgtttctaaatataag 23870
>gb|AC147407.10| Medicago truncatula clone mth2-159b14, complete sequence Length = 115857 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 107500 tactccctccgtttctaaatataag 107476 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 107352 tactccctccgtttctaaatataag 107376
>emb|CR954187.2| Medicago truncatula chromosome 5 clone mth2-181i2, COMPLETE SEQUENCE Length = 128654 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 100765 tactccctccgtttctaaatataag 100789
>gb|AC121327.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0016O23, complete sequence Length = 149400 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 ctagctagtactccctccgtt 99 ||||||||||||||||||||| Sbjct: 8276 ctagctagtactccctccgtt 8256
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 actagctagtactccctccgt 98 ||||||||||||||||||||| Sbjct: 898578 actagctagtactccctccgt 898558
>emb|X58565.1|HVPRP1C H.vulgare mRNA for a pathogenesis-related protein (Hv-1c) Length = 748 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 cgtatgtagtccactagtgaaatct 216 |||||||||||||||||| |||||| Sbjct: 691 cgtatgtagtccactagtaaaatct 667
>gb|AC133930.4| Oryza sativa chromosome 3 BAC OSJNBa0039O18 genomic sequence, complete sequence Length = 139187 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 cttcttcttcatcaccttccc 384 ||||||||||||||||||||| Sbjct: 69528 cttcttcttcatcaccttccc 69548
>emb|AL606625.3|OSJN00039 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032I19, complete sequence Length = 145383 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 ctagctagtactccctccgtt 99 ||||||||||||||||||||| Sbjct: 52683 ctagctagtactccctccgtt 52663
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 83 ctagtactccctccgttactaaatataag 111 ||||||||||||| ||| ||||||||||| Sbjct: 158850 ctagtactccctctgttcctaaatataag 158878
>gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete sequence Length = 125707 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 123104 tactccctccgtttctaaatataag 123128
>gb|AC166898.17| Medicago truncatula clone mth2-70l3, complete sequence Length = 100341 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 87234 tactccctccgtttctaaatataag 87210
>gb|AC098694.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1014H12, complete sequence Length = 129420 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 actagctagtactccctccgt 98 ||||||||||||||||||||| Sbjct: 37604 actagctagtactccctccgt 37624
>gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome 3 BAC 36I5, partial sequence Length = 65547 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||||| ||||||||| Sbjct: 43745 tactccctccgttacaaaatataag 43721
>gb|AC150798.3| Medicago truncatula chromosome 2 BAC clone mth2-33b11, complete sequence Length = 120992 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 95573 tactccctccgtttctaaatataag 95549
>gb|AC147963.2| Medicago truncatula chromosome 1 BAC clone mth2-42e19, complete sequence Length = 106951 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 80246 tactccctccgtttctaaatataag 80222
>ref|NM_061884.4| Caenorhabditis elegans F59H5.1 (F59H5.1) mRNA, complete cds Length = 2502 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 364 cttcttcttcatcaccttcccgctc 388 |||||||||||||| |||||||||| Sbjct: 143 cttcttcttcatcatcttcccgctc 119
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 23224700 tagtactccctccgtttctaaatat 23224724 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatataag 111 ||||||||||||||| ||||||||||| Sbjct: 23326757 tagtactccctccgtccctaaatataag 23326784 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 agtactccctccgttactaaatat 108 ||||||||||||||| |||||||| Sbjct: 22083715 agtactccctccgttcctaaatat 22083692 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 agtactccctccgttactaaatat 108 ||||||||||||||| |||||||| Sbjct: 14027531 agtactccctccgtttctaaatat 14027508
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 ctagctagtactccctccgtt 99 ||||||||||||||||||||| Sbjct: 23819461 ctagctagtactccctccgtt 23819441 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 |||||||||||| |||||||||||| Sbjct: 23424407 tactccctccgtcactaaatataag 23424431 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 agtactccctccgttactaaatat 108 ||||||||||||||| |||||||| Sbjct: 26584492 agtactccctccgtttctaaatat 26584515 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataa 110 ||||||||||||||| |||||||| Sbjct: 17229948 tactccctccgttacaaaatataa 17229971 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatataag 111 ||||||||||||||| ||||||||||| Sbjct: 6469303 tagtactccctccgtccctaaatataag 6469276 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ctccctccgttactaaatat 108 |||||||||||||||||||| Sbjct: 2269735 ctccctccgttactaaatat 2269754
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 83 ctagtactccctccgttactaaatataag 111 ||||||||||||| ||| ||||||||||| Sbjct: 20281115 ctagtactccctctgttcctaaatataag 20281143 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 actagctagtactccctccgt 98 ||||||||||||||||||||| Sbjct: 898578 actagctagtactccctccgt 898558 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 77 cactagctagtactccctccgttactaaatataagt 112 |||| |||| ||||||||||||| | |||||||||| Sbjct: 2849074 cactggctattactccctccgttccaaaatataagt 2849039
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 1470566 tagtactccctccgttcctaaatat 1470542 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatataag 111 |||||||||||||||| | ||||||||| Sbjct: 23775494 tagtactccctccgtttcgaaatataag 23775521 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 agtactccctccgttactaaatat 108 ||||||||||||||| |||||||| Sbjct: 17663039 agtactccctccgtttctaaatat 17663016 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ctagctagtactccctccgt 98 |||||||||||||||||||| Sbjct: 4201454 ctagctagtactccctccgt 4201473
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 53249 tagtactccctccgtttctaaatat 53225
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 143585 tagtactccctccgtttctaaatat 143561
>dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1147_D11 Length = 138444 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 135405 tagtactccctccgtttctaaatat 135429
>dbj|AP005107.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0431E05 Length = 146091 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 2321 tagtactccctccgtttctaaatat 2297
>dbj|AP004651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0091G06 Length = 161851 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 100437 tagtactccctccgtttctaaatat 100413
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 actagctagtactccctccgt 98 ||||||||||||||||||||| Sbjct: 153906 actagctagtactccctccgt 153886
>dbj|AP005545.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0638H11 Length = 162746 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 actagctagtactccctccgt 98 ||||||||||||||||||||| Sbjct: 57097 actagctagtactccctccgt 57117
>dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0025H07 Length = 145605 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 actagctagtactccctccgt 98 ||||||||||||||||||||| Sbjct: 17752 actagctagtactccctccgt 17732
>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016O19 Length = 169120 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 43089 tagtactccctccgtttctaaatat 43113
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 128791 tagtactccctccgttcctaaatat 128815
>dbj|AP006451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1249D05 Length = 132526 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 56155 tagtactccctccgttcctaaatat 56131
>dbj|AP005604.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1212_C12 Length = 147782 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 110751 tagtactccctccgttcctaaatat 110727
>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0435D08 Length = 148912 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 47884 tagtactccctccgtttctaaatat 47860
>dbj|AP004022.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_B06 Length = 99637 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 99226 tagtactccctccgtttctaaatat 99202 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 10075 tagtactccctccgtttctaaatat 10051
>dbj|AP005285.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F04 Length = 139563 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 26187 tagtactccctccgtttctaaatat 26163
>dbj|AP005069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654A08 Length = 154812 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 114973 tagtactccctccgtttctaaatat 114949
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 162732 tactccctccgttcctaaatataag 162756
>dbj|AP004092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1568_B05 Length = 115325 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 |||||||||||||||| |||||||| Sbjct: 33438 tactccctccgttacttaatataag 33462
>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0623F08 Length = 154540 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 80 tagctagtactccctccgttactaaatat 108 |||||||||||||||||||| | |||||| Sbjct: 142993 tagctagtactccctccgtttcaaaatat 142965
>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1323_A06 Length = 95665 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 80 tagctagtactccctccgttactaaatat 108 |||||||||||||||||||| | |||||| Sbjct: 21317 tagctagtactccctccgtttcaaaatat 21289
>dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498E12 Length = 153523 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 83 ctagtactccctccgttactaaatataag 111 ||||||||||||||||| | ||||||||| Sbjct: 21364 ctagtactccctccgttccaaaatataag 21336
>dbj|AK108369.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-D06, full insert sequence Length = 1161 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 364 cttcttcttcatcaccttccc 384 ||||||||||||||||||||| Sbjct: 677 cttcttcttcatcaccttccc 657
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 83 ctagtactccctccgttactaaatataag 111 ||||||||||||| ||| ||||||||||| Sbjct: 20292391 ctagtactccctctgttcctaaatataag 20292419 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 actagctagtactccctccgt 98 ||||||||||||||||||||| Sbjct: 898575 actagctagtactccctccgt 898555 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 77 cactagctagtactccctccgttactaaatataagt 112 |||| |||| ||||||||||||| | |||||||||| Sbjct: 2849025 cactggctattactccctccgttccaaaatataagt 2848990
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 ctagctagtactccctccgtt 99 ||||||||||||||||||||| Sbjct: 24131130 ctagctagtactccctccgtt 24131110 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 |||||||||||| |||||||||||| Sbjct: 23734317 tactccctccgtcactaaatataag 23734341 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 agtactccctccgttactaaatat 108 ||||||||||||||| |||||||| Sbjct: 26909756 agtactccctccgtttctaaatat 26909779 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataa 110 ||||||||||||||| |||||||| Sbjct: 17325134 tactccctccgttacaaaatataa 17325157 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatataag 111 ||||||||||||||| ||||||||||| Sbjct: 6535770 tagtactccctccgtccctaaatataag 6535743 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ctccctccgttactaaatat 108 |||||||||||||||||||| Sbjct: 2277516 ctccctccgttactaaatat 2277535
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 23152891 tagtactccctccgtttctaaatat 23152915 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatataag 111 ||||||||||||||| ||||||||||| Sbjct: 23254948 tagtactccctccgtccctaaatataag 23254975 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 agtactccctccgttactaaatat 108 ||||||||||||||| |||||||| Sbjct: 22012060 agtactccctccgttcctaaatat 22012037 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 agtactccctccgttactaaatat 108 ||||||||||||||| |||||||| Sbjct: 13981811 agtactccctccgtttctaaatat 13981788
>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06, complete sequence Length = 178552 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 103640 tagtactccctccgtttctaaatat 103664
>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168063 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatat 108 |||||||||||||||| |||||||| Sbjct: 37818 tagtactccctccgtttctaaatat 37842 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatataag 111 ||||||||||||||| ||||||||||| Sbjct: 139875 tagtactccctccgtccctaaatataag 139902
>emb|CR962128.2| Medicago truncatula chromosome 5 clone mth2-2o11, COMPLETE SEQUENCE Length = 136557 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 79 ctagctagtactccctccgttactaaatataag 111 ||||| ||||||||||||||| | ||||||||| Sbjct: 73201 ctagcaagtactccctccgtttcaaaatataag 73233
>emb|CT030168.3| M.truncatula DNA sequence from clone MTH2-16A18 on chromosome 3, complete sequence Length = 125291 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 87169 tactccctccgtttctaaatataag 87145 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 87021 tactccctccgtttctaaatataag 87045
>dbj|AP006693.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT35C17, TM0399, complete sequence Length = 94919 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 78659 tactccctccgttcctaaatataag 78635
>dbj|AP006687.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT41F23, TM0382, complete sequence Length = 99748 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 4785 tactccctccgttcctaaatataag 4761 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 4477 tactccctccgttcctaaatataag 4501
>dbj|AP006410.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT29C05, TM0301a, complete sequence Length = 28124 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 27422 tactccctccgttcctaaatataag 27398
>dbj|AP006381.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09G09, TM0234, complete sequence Length = 105887 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 26323 tactccctccgttcctaaatataag 26347
>dbj|AP006356.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT06I08, TM0082b, complete sequence Length = 93398 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 25824 tactccctccgttcctaaatataag 25848
>dbj|AP006143.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16L07, TM0254, complete sequence Length = 118592 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 68703 tactccctccgttcctaaatataag 68727 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 57033 tactccctccgttcctaaatataag 57057
>dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G09, TM0173b, complete sequence Length = 66866 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 3299 tactccctccgttcctaaatataag 3275
>dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19B18, TM0139, complete sequence Length = 106089 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 12766 tactccctccgttcctaaatataag 12742 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatataag 111 ||||||||| |||||| ||||||||||| Sbjct: 12423 tagtactccatccgttcctaaatataag 12450
>dbj|AP004940.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT48I11, TM0106, complete sequence Length = 103636 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 23896 tactccctccgttcctaaatataag 23872 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 23587 tactccctccgttcctaaatataag 23611
>dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT01P23, TM0047b, complete sequence Length = 69411 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 44068 tactccctccgttcctaaatataag 44092
>dbj|AP004543.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT08G20, TM0102b, complete sequence Length = 38490 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 37259 tactccctccgttcctaaatataag 37283
>dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT05E07, TM0055, complete sequence Length = 94516 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 69524 tactccctccgttcctaaatataag 69548
>dbj|AP004506.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03K03, TM0036a, complete sequence Length = 62624 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 12163 tactccctccgttcctaaatataag 12139
>dbj|AP004489.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT04I02, TM0021, complete sequence Length = 83700 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataag 111 ||||||||||||| ||||||||||| Sbjct: 44851 tactccctccgttcctaaatataag 44827 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataa 110 ||||||||||||| |||||||||| Sbjct: 44547 tactccctccgttcctaaatataa 44570
>gb|AC079830.9| Oryza sativa chromosome 3 BAC OSJNBb0009F04 genomic sequence, complete sequence Length = 129655 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatataag 111 ||||||||||||||| ||| |||||||| Sbjct: 15616 tagtactccctccgtcacttaatataag 15589
>ref|XM_467088.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2016 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 tctccctccactcccgcgccttct 368 ||||||||||||||| |||||||| Sbjct: 416 tctccctccactccctcgccttct 439
>gb|AC104272.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1045_C06, complete sequence Length = 143130 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 81 agctagtactccctccgttactaaatat 108 |||||||||||||||||| |||||||| Sbjct: 35676 agctagtactccctccgtccctaaatat 35703
>gb|AC124151.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0019E05, complete sequence Length = 129021 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataa 110 ||||||||||||||| |||||||| Sbjct: 104750 tactccctccgttacaaaatataa 104773
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ctccctccgttactaaatat 108 |||||||||||||||||||| Sbjct: 45734 ctccctccgttactaaatat 45753
>gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0056I11, complete sequence Length = 145796 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 83 ctagtactccctccgttactaaatataa 110 |||||||||||||||| |||||||||| Sbjct: 75967 ctagtactccctccgtccctaaatataa 75994
>gb|AC134923.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0030I07, complete sequence Length = 122733 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 agtactccctccgttactaaatat 108 ||||||||||||||| |||||||| Sbjct: 46750 agtactccctccgtttctaaatat 46773
>gb|AC090683.7| Oryza sativa chromosome 3 BAC OSJNBa0035I24 genomic sequence, complete sequence Length = 134728 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatataag 111 ||||||||||||||| ||| |||||||| Sbjct: 23065 tagtactccctccgtcacttaatataag 23092
>emb|CR956392.5| M.truncatula DNA sequence from clone MTH2-52P12 on chromosome 3, complete sequence Length = 115163 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataa 110 ||||||||||||| |||||||||| Sbjct: 101284 tactccctccgtttctaaatataa 101261
>emb|AJ310833.1|MTR310833 Medicago truncatula genomic DNA, Sy13 locus Length = 2088 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatataag 111 |||||||||||||||| |||||||||| Sbjct: 424 tagtactccctccgtttttaaatataag 451
>gb|AC145021.14| Medicago truncatula clone mth2-23a16, complete sequence Length = 119096 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatataag 111 ||||||||| |||||| ||||||||||| Sbjct: 87951 tagtactccttccgtttctaaatataag 87924
>gb|AC136449.21| Medicago truncatula clone mth2-11k13, complete sequence Length = 112369 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 tactccctccgttactaaatataa 110 ||||||||||||| |||||||||| Sbjct: 16869 tactccctccgttcctaaatataa 16846
>gb|AC130798.15| Medicago truncatula clone mth2-27f17, complete sequence Length = 92189 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatataag 111 ||||||||| |||||| ||||||||||| Sbjct: 26675 tagtactccttccgtttctaaatataag 26648
>gb|AC129092.13| Medicago truncatula clone mth2-17n16, complete sequence Length = 104281 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatataag 111 |||||||||||||||| |||||||||| Sbjct: 25616 tagtactccctccgtttttaaatataag 25589 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataa 110 ||||||||||||| |||||||||| Sbjct: 25465 tactccctccgtttctaaatataa 25488
>emb|AL392043.21| Human DNA sequence from clone RP11-288G11 on chromosome 10 Contains the 3' end of the INPP5A gene for inositol polyphosphate-5-phosphatase 40kDa, a novel gene, the NKX6-2 gene for NK6 transcription factor related locus 2, a novel gene (DKFZp434A1721), the 3' end of a novel gene and ten CpG islands, complete sequence Length = 208064 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccttcccgctctccccttcc 397 |||||||||||||||||||| Sbjct: 4630 ccttcccgctctccccttcc 4611
>gb|AC130313.3| Homo sapiens chromosome 8, clone RP11-460A11, complete sequence Length = 148476 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tagtgaaatctttacaaaga 225 |||||||||||||||||||| Sbjct: 10094 tagtgaaatctttacaaaga 10075
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 cacgtcgcggatcaactcgtcgaagttg 304 ||||| |||||||| ||||||||||||| Sbjct: 109049 cacgtggcggatcacctcgtcgaagttg 109022
>gb|BT009538.1| Triticum aestivum clone wr1.pk0144.b10:fis, full insert mRNA sequence Length = 2748 Score = 40.1 bits (20), Expect = 6.1 Identities = 39/44 (88%), Gaps = 1/44 (2%) Strand = Plus / Minus Query: 180 tctatatacatccgtatgtagtccactagtgaaatctttacaaa 223 |||||||||||| | |||| ||||| ||||||||||| |||||| Sbjct: 2397 tctatatacatctgcatgtggtcca-tagtgaaatctctacaaa 2355
>gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0023F01, complete sequence Length = 145009 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 agtactccctccgttactaaatat 108 ||||||||||||||| |||||||| Sbjct: 5228 agtactccctccgtttctaaatat 5205
>emb|BX248584.1| Blochmannia floridanus complete genome; segment 1/3 Length = 250050 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ttactaaatataagtctttt 117 |||||||||||||||||||| Sbjct: 238829 ttactaaatataagtctttt 238848
>emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome 3, BAC clone T8H10 Length = 87503 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatataag 111 |||||||||||| ||| ||||||||||| Sbjct: 59513 tagtactccctctgtttctaaatataag 59540
>emb|CR932962.2| Medicago truncatula chromosome 5 clone mte1-70c24, COMPLETE SEQUENCE Length = 128704 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataa 110 ||||||||||||| |||||||||| Sbjct: 59625 tactccctccgtttctaaatataa 59648
>emb|CR858883.1| Pongo pygmaeus mRNA; cDNA DKFZp469F0610 (from clone DKFZp469F0610) Length = 6168 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 366 tcttcttcatcaccttcccgctctcccc 393 ||||||||||| |||||| ||||||||| Sbjct: 4297 tcttcttcatcgccttcctgctctcccc 4270
>gb|AC040963.6| Homo sapiens chromosome 18, clone RP11-685A21, complete sequence Length = 146198 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 catcatggattcatggagca 40 |||||||||||||||||||| Sbjct: 75414 catcatggattcatggagca 75433
>dbj|AP004253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1116_C07 Length = 108208 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 actccctccgttactaaatataag 111 |||||||||||| ||||||||||| Sbjct: 45785 actccctccgttcctaaatataag 45762
>gb|AC166286.14| Medicago truncatula clone mth2-173c1, complete sequence Length = 114609 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatataag 111 |||||||||||||||| |||| |||||| Sbjct: 90961 tagtactccctccgttcctaattataag 90988
>gb|AC151529.20| Medicago truncatula clone mth2-7n23, complete sequence Length = 134908 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatataag 111 |||||||||||||||| | ||||||||| Sbjct: 37614 tagtactccctccgtttcaaaatataag 37587
>gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0073N20 BAC genomic sequence, complete sequence Length = 147289 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaatataag 111 ||||||||||||||| ||||||||||| Sbjct: 74927 tagtactccctccgtccctaaatataag 74954
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 77 cactagctagtactccctccgttactaaatataagt 112 |||| |||| ||||||||||||| | |||||||||| Sbjct: 30106 cactggctattactccctccgttccaaaatataagt 30071
>gb|DQ013359.1| Triticum aestivum wall-associated kinase 3 (WAK3) gene, complete cds Length = 5331 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 ctacatacggagcaaaatga 156 |||||||||||||||||||| Sbjct: 348 ctacatacggagcaaaatga 329
>gb|AC011198.2|AC011198 Homo sapiens chromosome 8 clone RP11-18K20, complete sequence Length = 191233 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tagtgaaatctttacaaaga 225 |||||||||||||||||||| Sbjct: 163607 tagtgaaatctttacaaaga 163626
>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083G16, complete sequence Length = 145590 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 tagctagtactccctccgtt 99 |||||||||||||||||||| Sbjct: 5744 tagctagtactccctccgtt 5725
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataa 110 ||||||||||||| |||||||||| Sbjct: 150740 tactccctccgtttctaaatataa 150763 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 agtactccctccgttactaaatat 108 ||||||||||||||| |||||||| Sbjct: 24823 agtactccctccgtttctaaatat 24846
>dbj|AP004368.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1139B11 Length = 136548 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 actccctccgttactaaatataag 111 |||||||||||| ||||||||||| Sbjct: 78047 actccctccgttcctaaatataag 78024
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataa 110 ||||||||||||| |||||||||| Sbjct: 89231 tactccctccgttcctaaatataa 89254
>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0024F24 Length = 172642 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ctagctagtactccctccgt 98 |||||||||||||||||||| Sbjct: 109167 ctagctagtactccctccgt 109186
>dbj|AP007204.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0008D05 Length = 134776 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 actccctccgttactaaatataag 111 |||||||||||| ||||||||||| Sbjct: 98996 actccctccgttcctaaatataag 98973
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tactccctccgttactaaatataa 110 ||||||||||||| |||||||||| Sbjct: 19195 tactccctccgttcctaaatataa 19218
>dbj|AP003375.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1414_E05 Length = 105222 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 tagtactccctccgttactaaatataag 111 ||||||||||||||| ||||||||||| Sbjct: 50057 tagtactccctccgtctctaaatataag 50030
>gb|AC068570.23| Homo sapiens chromosome 8, clone RP11-126N1, complete sequence Length = 148783 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tagtgaaatctttacaaaga 225 |||||||||||||||||||| Sbjct: 18555 tagtgaaatctttacaaaga 18574
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 tagctagtactccctccgtt 99 |||||||||||||||||||| Sbjct: 96452 tagctagtactccctccgtt 96471
>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0054L03 Length = 183623 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 tagtactccctccgttactaaata 107 |||||||||||||||| ||||||| Sbjct: 75965 tagtactccctccgttcctaaata 75988
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0019L07 Length = 131650 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 85 agtactccctccgttactaaatataagt 112 |||||||| |||||| |||||||||||| Sbjct: 94538 agtactccatccgtttctaaatataagt 94565
>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:P0491E01 Length = 136150 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 tctccctccactcccgcgccttct 368 ||||||||||||||| |||||||| Sbjct: 74620 tctccctccactccctcgccttct 74643 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,706,312 Number of Sequences: 3902068 Number of extensions: 3706312 Number of successful extensions: 109412 Number of sequences better than 10.0: 284 Number of HSP's better than 10.0 without gapping: 324 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 102990 Number of HSP's gapped (non-prelim): 6377 length of query: 453 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 431 effective length of database: 17,147,199,772 effective search space: 7390443101732 effective search space used: 7390443101732 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
