>FZD6_MOUSE (Q61089) Frizzled 6 precursor (Frizzled-6) (Fz-6) (mFz6)|
          Length = 709

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = +2

Query: 257 LPHCSSTVKTTSHP*TSNRRPTSSKRQ 337
           LPHC  TV  TSHP T    P     Q
Sbjct: 126 LPHCDDTVPVTSHPHTELSGPQKKSDQ 152

>YHF4_SCHPO (O74745) Hypothetical protein C1734.04 in chromosome II|
          Length = 430

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 11  SIMPTAKIHMKSCIFGCFSL*KH 79
           SIM  AK+H++ C F  FS  KH
Sbjct: 322 SIMSKAKVHLEGCEFPAFSFEKH 344

>ARP9_YEAST (Q05123) Actin-like protein ARP9 (Chromatin structure remodeling|
           complex protein ARP9) (SWI/SNF complex component ARP9)
          Length = 467

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 13/79 (16%)
 Frame = +1

Query: 100 NNGWNLEDTQVLTKHNSSSLKQYNLLGPYDD*QFPASLSSSYP-------------*HHT 240
           ++ W+  D +++T++   SL+  NL+      Q PASL+++Y               HHT
Sbjct: 116 HHSWSQSDLEIITQYVFESLEINNLI------QLPASLAATYSMISLQNCCIIDVGTHHT 169

Query: 241 DMVN*TTTLQLYGKDHFPS 297
           D++      QL   DH  S
Sbjct: 170 DIIPIVDYAQL---DHLVS 185

>GFRA2_HUMAN (O00451) GDNF family receptor alpha-2 precursor (GFR-alpha-2)|
           (Neurturin receptor alpha) (NTNR-alpha) (NRTNR-alpha)
           (TGF-beta-related neurotrophic factor receptor 2) (GDNF
           receptor beta) (GDNFR-beta) (RET ligand 2)
          Length = 464

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -1

Query: 164 CFREDELCLVSTCVSSKFQPLFG*WLRRCVS-RGRNNRICNFSCE 33
           C R +ELC   +  SS+++      LR+C++ R RN  + N  C+
Sbjct: 40  CVRANELCAAESNCSSRYRT-----LRQCLAGRDRNTMLANKECQ 79

>GFRA2_MOUSE (O08842) GDNF family receptor alpha-2 precursor (GFR-alpha-2)|
           (Neurturin receptor alpha) (NTNR-alpha) (NRTNR-alpha)
           (TGF-beta-related neurotrophic factor receptor 2) (GDNF
           receptor beta) (GDNFR-beta)
          Length = 463

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -1

Query: 164 CFREDELCLVSTCVSSKFQPLFG*WLRRCVS-RGRNNRICNFSCE 33
           C R +ELC   +  SS+++      LR+C++ R RN  + N  C+
Sbjct: 40  CVRANELCAAESNCSSRYRT-----LRQCLAGRDRNTMLANKECQ 79

>PSN1_BRARE (Q9W6T7) Presenilin-1 (EC 3.4.23.-) (PS1) (Zf-PS1)|
          Length = 456

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +2

Query: 185 TTINNSQLLFPHHIHSTTLIW*TELPHCSSTVKTTSHP 298
           T    ++ +FP  I+S+T++W   +   + T   +SHP
Sbjct: 263 TAQERNEAIFPALIYSSTMVWLFNMADSAETRNNSSHP 300

>GPMI_IDILO (Q5QZA9) 2,3-bisphosphoglycerate-independent phosphoglycerate|
           mutase (EC 5.4.2.1) (Phosphoglyceromutase)
           (BPG-independent PGAM) (iPGM)
          Length = 511

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = -2

Query: 106 HCLVDGSGGV--FLEGETTEYATFHVNFSCG 20
           HCLVDGSGG     +G+       HVN   G
Sbjct: 44  HCLVDGSGGAVGLPDGQMGNSEVGHVNLGAG 74

>YH17_YEAST (P38898) Hypothetical 17.1 kDa protein in PUR5 3'region|
          Length = 153

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 182 HTTINNSQLLFPHHIHSTTLIW*TELPHCSSTVKTTSH 295
           HTT++N  L  P H  ++ L+    LPH +  + TT H
Sbjct: 69  HTTLSNLSLNLPSHYPTSPLV---TLPHSTIPLPTTIH 103

>YLF2_YEAST (P38746) Putative GTP-binding protein YLF2|
          Length = 405

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = +1

Query: 43  KLHIRLFLPLETHLLSHQP----NNGWNLEDTQVLTKHN 147
           K+   L   LE HL + +      + WNL++ ++L KHN
Sbjct: 180 KIETELLDALEEHLFNGKKIRHFKDHWNLDEVKILNKHN 218

>ASTN_MOUSE (Q61137) Astrotactin-1 precursor (Neuronal migration protein GC14)|
          Length = 1302

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = -2

Query: 220 MRKEKLGIVNRRMVLEGYTASEKMSCA*LALVCLPSSNHCLVDGSGGVFLEG 65
           + K  L +++    + G   S  +SC  +  + L    H + DGS  + LEG
Sbjct: 381 VNKTTLTLISVTSCVIGLVCSSHVSCPLVVKITLHVPEHLIADGSRFILLEG 432

>HPSE2_HUMAN (Q8WWQ2) Heparanase-2 (EC 3.2.-.-) (Hpa2)|
          Length = 592

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 58  LFLPLETHLLSHQPNNGWNLEDTQVLTKHNSSSLKQYNL 174
           L L    + L   PNN WN      L K+++S  K+YN+
Sbjct: 219 LHLIFALNALRRNPNNSWNSSSALSLLKYSAS--KKYNI 255


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,083,648
Number of Sequences: 219361
Number of extensions: 1191609
Number of successful extensions: 2418
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2416
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)