| Clone Name | rbast39h06 |
|---|---|
| Clone Library Name | barley_pub |
>IML3_YEAST (P38265) Central kinetochore subunit IML3 (Increased minichromosome| loss protein 3) (Minichromosome maintenance protein 19) Length = 245 Score = 29.6 bits (65), Expect = 2.0 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Frame = -2 Query: 246 ESHPGLCCSY-NYFHADLCCPCPYFNQRRVISVARIPLSLPILLGYTVVLCRLRLSSVIS 70 ES GL Y N H PY ++V R+PL+ IL G+T ++ ++S S Sbjct: 168 ESCEGLALGYGNTMHPYNDAIVPYIYNETGMAVERLPLTSVILAGHTKIMRESIVTSTRS 227 Query: 69 CREHV 55 R V Sbjct: 228 LRNRV 232
>TAF1_DROME (P51123) Transcription initiation factor TFIID subunit 1 (EC| 2.7.11.1) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230) (TAFII250) (TBP-associated factor 230 kDa) (p230) Length = 2129 Score = 28.9 bits (63), Expect = 3.4 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = -2 Query: 312 NEDPGFAEGGRASRP*QAWLFTESHPGLCCSYNYFHADL 196 N+D F G RAS P ++ E H G S N H + Sbjct: 1727 NDDYNFDRGSRASSPGDDYIDVEGHGGHASSSNSIHRSM 1765
>LIPP_HUMAN (P16233) Pancreatic triacylglycerol lipase precursor (EC 3.1.1.3)| (Pancreatic lipase) (PL) Length = 465 Score = 28.5 bits (62), Expect = 4.4 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = -2 Query: 228 CCSYNYFHADLCCPCP 181 C SYN F A+ C PCP Sbjct: 302 CASYNVFTANKCFPCP 317
>RYBP_BRARE (Q5EG55) RING1 and YY1-binding protein (Death effector| domain-associated factor) (DED-associated factor) Length = 257 Score = 27.7 bits (60), Expect = 7.5 Identities = 20/77 (25%), Positives = 31/77 (40%) Frame = +1 Query: 70 RNDARQSQPTENNSVTQENG*TQGDSSN*NHPSLVKVRARTTQVSXXXXXXXXXXRMALC 249 ++D QS P+E NS+ T+ +S+ + P L + T Q Sbjct: 145 KSDIHQSPPSERNSIQSGKSTTKTKNSHNSRPKLKNIDRSTAQQLAITVGNVTVIITDFK 204 Query: 250 EKPGLSWPASSTSFSKS 300 EK S +SST S + Sbjct: 205 EKTRTSSTSSSTVTSSA 221
>COBL4_ARATH (Q9LFW3) COBRA-like protein 4 precursor| Length = 431 Score = 27.7 bits (60), Expect = 7.5 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = -2 Query: 240 HPGLCCSYNYFHADLCCPCP 181 HP C S++ F+ D PCP Sbjct: 214 HPSCCVSFSSFYNDTITPCP 233
>ATL2M_ARATH (O82353) RING-H2 finger protein ATL2M| Length = 214 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = -2 Query: 135 SLPILLGYTVVLCRLRLSSVISCREHV*AKL*VQFSGDK 19 S+ I LG+ V+L + LSS I CR+ V+ +GD+ Sbjct: 38 SIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDR 76
>NOS_DROME (Q27571) Nitric-oxide synthase (EC 1.14.13.39) (dNOS)| Length = 1349 Score = 27.3 bits (59), Expect = 9.8 Identities = 15/43 (34%), Positives = 19/43 (44%) Frame = +1 Query: 16 KLITTKLNLQFCSNMFPARNDARQSQPTENNSVTQENG*TQGD 144 K T K NL+ +FP R DA+ NN + G Q D Sbjct: 360 KYATNKGNLRSAITIFPQRTDAKHDYRIWNNQLISYAGYKQAD 402
>STK36_HUMAN (Q9NRP7) Serine/threonine-protein kinase 36 (EC 2.7.11.1) (Fused| homolog) Length = 1315 Score = 27.3 bits (59), Expect = 9.8 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +2 Query: 95 LQRTTV*PKRMGKLKGILATEITRRWLK*GQGQHRSA 205 L R P+ L GILA+E+ W K G G+ SA Sbjct: 341 LPRLGATPQESSLLAGILASELKSSWAKSGTGEVPSA 377
>LIPP_PIG (P00591) Pancreatic triacylglycerol lipase (EC 3.1.1.3) (Pancreatic| lipase) (PL) Length = 450 Score = 27.3 bits (59), Expect = 9.8 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = -2 Query: 228 CCSYNYFHADLCCPCP 181 C SYN F A+ C PCP Sbjct: 286 CDSYNVFTANKCFPCP 301 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,417,605 Number of Sequences: 219361 Number of extensions: 767755 Number of successful extensions: 1498 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1483 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1498 length of database: 80,573,946 effective HSP length: 85 effective length of database: 61,928,261 effective search space used: 1486278264 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)