>gb|AF346004.1|AF346004 Lolium perenne L3 ribosomal protein mRNA, partial cds
          Length = 855

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                       
Query: 33  gcagcagcagctcaaagttgcaattgcaatgcataaaccggtacccaatcaatctgccac 92
           |||| ||||||||| ||| |||||||||||||||||||| ||||  || |||||||||||
Sbjct: 775 gcagtagcagctcagagtggcaattgcaatgcataaaccagtacaaaaacaatctgccac 716

              
Query: 93  aaa 95
           |||
Sbjct: 715 aaa 713



 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                          
Query: 125 aacactatgggataagatctgtcgcagcctaagccttgagcttgccg 171
           |||||||||||||||||||||  |||| |||||||||||||||||||
Sbjct: 691 aacactatgggataagatctgcagcagtctaagccttgagcttgccg 645

>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0011J22 map R10571S, complete sequence
          Length = 154441

 Score = 46.1 bits (23), Expect = 0.036
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 153   ctaagccttgagcttgccgaaaaacct 179
             ||||||||||||||||||||| |||||
Sbjct: 37785 ctaagccttgagcttgccgaagaacct 37811

>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23
              map near R10571S, complete sequence
          Length = 161073

 Score = 46.1 bits (23), Expect = 0.036
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 153    ctaagccttgagcttgccgaaaaacct 179
              ||||||||||||||||||||| |||||
Sbjct: 137086 ctaagccttgagcttgccgaagaacct 137112

>gb|AY257863.1| Oryza sativa (japonica cultivar-group) chromosome 11 genomic sequence
          Length = 42748

 Score = 46.1 bits (23), Expect = 0.036
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 153   ctaagccttgagcttgccgaaaaacct 179
             ||||||||||||||||||||| |||||
Sbjct: 31415 ctaagccttgagcttgccgaagaacct 31389

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.036
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 153     ctaagccttgagcttgccgaaaaacct 179
               ||||||||||||||||||||| |||||
Sbjct: 3277200 ctaagccttgagcttgccgaagaacct 3277174

>dbj|AK101469.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040J04, full
            insert sequence
          Length = 1403

 Score = 46.1 bits (23), Expect = 0.036
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 153  ctaagccttgagcttgccgaaaaacct 179
            ||||||||||||||||||||| |||||
Sbjct: 1246 ctaagccttgagcttgccgaagaacct 1220

>dbj|AK099225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094A07, full
            insert sequence
          Length = 1433

 Score = 46.1 bits (23), Expect = 0.036
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 153  ctaagccttgagcttgccgaaaaacct 179
            ||||||||||||||||||||| |||||
Sbjct: 1224 ctaagccttgagcttgccgaagaacct 1198

>dbj|AK073392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041E13, full
            insert sequence
          Length = 1486

 Score = 46.1 bits (23), Expect = 0.036
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 153  ctaagccttgagcttgccgaaaaacct 179
            ||||||||||||||||||||| |||||
Sbjct: 1263 ctaagccttgagcttgccgaagaacct 1237

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.036
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 153     ctaagccttgagcttgccgaaaaacct 179
               ||||||||||||||||||||| |||||
Sbjct: 3285913 ctaagccttgagcttgccgaagaacct 3285887

>emb|AL807757.9| Human DNA sequence from clone RP11-49O14 on chromosome 9 Contains two
            novel genes, complete sequence
          Length = 93279

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 132  tgggataagatctgtcgcagcc 153
            ||||||||||||||||||||||
Sbjct: 3743 tgggataagatctgtcgcagcc 3722

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 0.56
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 151     gcctaagccttgagcttgccgaaaaacct 179
               ||||| ||||||||||||||||| |||||
Sbjct: 3430583 gcctaggccttgagcttgccgaagaacct 3430555

>dbj|AK060925.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-H11, full
            insert sequence
          Length = 1468

 Score = 42.1 bits (21), Expect = 0.56
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 151  gcctaagccttgagcttgccgaaaaacct 179
            ||||| ||||||||||||||||| |||||
Sbjct: 1235 gcctaggccttgagcttgccgaagaacct 1207

>dbj|D12630.1|RICRPL3A Oryza sativa (japonica cultivar-group) mRNA for ribosomal protein L3,
            complete cds
          Length = 1368

 Score = 42.1 bits (21), Expect = 0.56
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 151  gcctaagccttgagcttgccgaaaaacct 179
            ||||| ||||||||||||||||| |||||
Sbjct: 1193 gcctaggccttgagcttgccgaagaacct 1165

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 0.56
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 151     gcctaagccttgagcttgccgaaaaacct 179
               ||||| ||||||||||||||||| |||||
Sbjct: 3430524 gcctaggccttgagcttgccgaagaacct 3430496

>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 116371

 Score = 42.1 bits (21), Expect = 0.56
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 151    gcctaagccttgagcttgccgaaaaacct 179
              ||||| ||||||||||||||||| |||||
Sbjct: 101336 gcctaggccttgagcttgccgaagaacct 101364

>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 137936

 Score = 42.1 bits (21), Expect = 0.56
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 151    gcctaagccttgagcttgccgaaaaacct 179
              ||||| ||||||||||||||||| |||||
Sbjct: 109636 gcctaggccttgagcttgccgaagaacct 109608

>gb|AC150709.3| Bos taurus  BAC CH240-273I10 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 142944

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 33    gcagcagcagctcaaagtt 51
             |||||||||||||||||||
Sbjct: 94940 gcagcagcagctcaaagtt 94922

>gb|AC149669.2| Bos taurus  BAC CH240-57J21 (Children's Hospital Oakland Research
            Institute Bovine BAC Library (male)) complete sequence
          Length = 227069

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 49   gttgcaattgcaatgcata 67
            |||||||||||||||||||
Sbjct: 9433 gttgcaattgcaatgcata 9451

>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 32      cgcagcagcagctcaaagt 50
               |||||||||||||||||||
Sbjct: 1583643 cgcagcagcagctcaaagt 1583625

>gb|AY347531.1| Triticum aestivum cultivar Falat ribosomal protein L3 (RPL3) mRNA,
            RPL3-A2 allele, complete cds
          Length = 1170

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 153  ctaagccttgagcttgccg 171
            |||||||||||||||||||
Sbjct: 1170 ctaagccttgagcttgccg 1152

>gb|AY343328.1| Triticum aestivum ribosomal protein L3 (RPL3) mRNA, RPL3-A2 allele,
            complete cds
          Length = 1170

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 153  ctaagccttgagcttgccg 171
            |||||||||||||||||||
Sbjct: 1170 ctaagccttgagcttgccg 1152

>emb|AJ427478.2|SSC427478 Sus scrofa ASIP gene for agouti signalling protein and AHCY gene for
              S-adenosylhomocysteine hydrolase
          Length = 204138

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 48     agttgcaattgcaatgcat 66
              |||||||||||||||||||
Sbjct: 162701 agttgcaattgcaatgcat 162719

>gb|AY916525.1| Sus scrofa breed Duroc agouti signalling protein (ASIP) gene,
           complete cds
          Length = 8675

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  agttgcaattgcaatgcat 66
           |||||||||||||||||||
Sbjct: 908 agttgcaattgcaatgcat 926

>ref|NM_001017610.1| Danio rerio zgc:112403 (zgc:112403), mRNA
          Length = 1275

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 33 gcagcagcagctcaaagtt 51
          |||||||||||||||||||
Sbjct: 52 gcagcagcagctcaaagtt 70

>dbj|AB206998.1| Sus scrofa ASIP and AHCY genes for agouti signaling protein and
             S-adenosylhomocysteine hydrolase, complete cds
          Length = 127234

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 48    agttgcaattgcaatgcat 66
             |||||||||||||||||||
Sbjct: 43719 agttgcaattgcaatgcat 43737

>gb|BC093287.1| Danio rerio zgc:112403, mRNA (cDNA clone MGC:112403
          IMAGE:7399838), complete cds
          Length = 1275

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 33 gcagcagcagctcaaagtt 51
          |||||||||||||||||||
Sbjct: 52 gcagcagcagctcaaagtt 70

>emb|AL359398.2|CNS05TE1 Human chromosome 14 DNA sequence BAC R-369C8 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 176399

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 85     tctgccacaaaggttggaa 103
              |||||||||||||||||||
Sbjct: 115315 tctgccacaaaggttggaa 115297

>emb|AL158111.5|CNS01RGL Human chromosome 14 DNA sequence BAC R-106G3 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 172755

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 85    tctgccacaaaggttggaa 103
             |||||||||||||||||||
Sbjct: 12996 tctgccacaaaggttggaa 12978

>gb|AC174928.2| Mus musculus BAC clone CH25-20L19 from chromosome 6, complete
            sequence
          Length = 94653

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 142  tctgtcgcagcctaagccttgag 164
            ||||| |||||||||||||||||
Sbjct: 1005 tctgtggcagcctaagccttgag 1027

>emb|AL929035.14| Mouse DNA sequence from clone RP23-234F15 on chromosome 2, complete
             sequence
          Length = 171936

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 85    tctgccacaaaggttggaa 103
             |||||||||||||||||||
Sbjct: 91926 tctgccacaaaggttggaa 91944

>emb|AL732525.13| Mouse DNA sequence from clone RP23-358I10 on chromosome 2, complete
             sequence
          Length = 220495

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 151   gcctaagccttgagcttgc 169
             |||||||||||||||||||
Sbjct: 23122 gcctaagccttgagcttgc 23104


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,442,366
Number of Sequences: 3902068
Number of extensions: 1442366
Number of successful extensions: 88515
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88338
Number of HSP's gapped (non-prelim): 177
length of query: 179
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 157
effective length of database: 17,147,199,772
effective search space: 2692110364204
effective search space used: 2692110364204
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)