>gb|AC166898.17| Medicago truncatula clone mth2-70l3, complete sequence
          Length = 100341

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 87    ccatgcatgcattgcacactc 107
             |||||||||||||||||||||
Sbjct: 75508 ccatgcatgcattgcacactc 75488

>gb|AC147963.2| Medicago truncatula chromosome 1 BAC clone mth2-42e19, complete
             sequence
          Length = 106951

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 87    ccatgcatgcattgcacactc 107
             |||||||||||||||||||||
Sbjct: 68521 ccatgcatgcattgcacactc 68501

>emb|BX571946.9| Zebrafish DNA sequence from clone DKEY-232H18 in linkage group 22,
              complete sequence
          Length = 179796

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 202    atggttggatggatggatcga 222
              |||||||||||||||||||||
Sbjct: 150383 atggttggatggatggatcga 150403

>gb|AC151752.1| Ornithorhynchus anatinus chromosome UNK clone OABb-503A1, complete
             sequence
          Length = 132108

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   tgatgcagcaaaattaatca 196
             ||||||||||||||||||||
Sbjct: 28313 tgatgcagcaaaattaatca 28332

>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete
              sequence
          Length = 1178688

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 202    atggttggatggatggatcgagagcgag 229
              |||| ||||||||||||| |||||||||
Sbjct: 522227 atgggtggatggatggatggagagcgag 522200

>gb|AC154566.2| Mus musculus BAC clone RP23-407A17 from chromosome 17, complete sequence
          Length = 204306

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     tcttggccatgcatgcattg 100
              ||||||||||||||||||||
Sbjct: 158025 tcttggccatgcatgcattg 158044

>ref|XM_572973.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNI01890) partial mRNA
          Length = 3316

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 202 atggttggatggatggatcgagagcgag 229
           |||| ||||||||||||| |||||||||
Sbjct: 63  atgggtggatggatggatggagagcgag 36

>gb|AC132367.3| Mus musculus BAC clone RP23-465K21 from chromosome 17, complete
             sequence
          Length = 192971

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    tcttggccatgcatgcattg 100
             ||||||||||||||||||||
Sbjct: 39389 tcttggccatgcatgcattg 39408

>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0095P22, complete sequence
          Length = 162766

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 200    gcatggttggatggatggatcgag 223
              |||||| |||||||||||||||||
Sbjct: 126609 gcatggatggatggatggatcgag 126632

>emb|CR383660.9| Zebrafish DNA sequence from clone DKEY-1H22 in linkage group 14,
            complete sequence
          Length = 139631

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 188  aattaatcatcagcatggtt 207
            ||||||||||||||||||||
Sbjct: 6035 aattaatcatcagcatggtt 6016

>emb|AL354833.9| Human DNA sequence from clone RP11-157L14 on chromosome 13 Contains an
              olfactory receptor pseudogene,  a novel gene (RGC32), the
              3' end of a novel gene (contains KIAA0564 and FLJ21779)
              possible ortholog of RIKEN cDNA 1300010F03 gene, and 2 CpG
              islands, complete sequence
          Length = 158871

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    gcatggttggatggatggat 219
              ||||||||||||||||||||
Sbjct: 117612 gcatggttggatggatggat 117593

>emb|AL031733.3|HS455J7 Human DNA sequence from clone RP3-455J7 on chromosome 1q24 Contains the
              5' end of the CD3Z gene for CD3Z antigen zeta polypeptide
              (TiT3 complex), an aldo-keto reductase family 1 member D1
              (delta 4-3-ketosteroid-5-beta-reductase) (AKR1D1)
              pseudogene, the CREG gene for cellular repressor of
              E1A-stimulated genes, a ribosomal protein S18 (RPS18)
              pseudogene, a novel gene, the 5' end of the gene for a
              novel protein and a CpG island, complete sequence
          Length = 215861

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    gcatggttggatggatggat 219
              ||||||||||||||||||||
Sbjct: 173722 gcatggttggatggatggat 173703

>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0096I10, complete sequence
          Length = 171946

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 200   gcatggttggatggatggatcgag 223
             |||||| |||||||||||||||||
Sbjct: 83489 gcatggatggatggatggatcgag 83466

>emb|BX571852.20| Zebrafish DNA sequence from clone DKEY-175N6 in linkage group 10,
             complete sequence
          Length = 178333

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   gcatggttggatggatggat 219
             ||||||||||||||||||||
Sbjct: 35176 gcatggttggatggatggat 35195

>emb|BX510332.10| Zebrafish DNA sequence from clone CH211-225M7, complete sequence
          Length = 171212

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    gcatggttggatggatggat 219
              ||||||||||||||||||||
Sbjct: 117937 gcatggttggatggatggat 117956

>emb|BX548054.19| Zebrafish DNA sequence from clone CH211-237N4 in linkage group 14,
              complete sequence
          Length = 128658

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    aattaatcatcagcatggtt 207
              ||||||||||||||||||||
Sbjct: 112433 aattaatcatcagcatggtt 112452

>ref|XM_392958.2| PREDICTED: Apis mellifera similar to sex-lethal (LOC409446), mRNA
          Length = 1346

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 61 cacatcaaataccatcaagt 80
          ||||||||||||||||||||
Sbjct: 22 cacatcaaataccatcaagt 41

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 200      gcatggttggatggatggatcgag 223
                |||||| |||||||||||||||||
Sbjct: 24325500 gcatggatggatggatggatcgag 24325523

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 204      ggttggatggatggatcgagagcg 227
                ||||||||||||||||||| ||||
Sbjct: 31720891 ggttggatggatggatcgacagcg 31720914

>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0503C12
          Length = 147180

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 204    ggttggatggatggatcgagagcg 227
              ||||||||||||||||||| ||||
Sbjct: 134623 ggttggatggatggatcgacagcg 134646

>emb|BX890617.13| Zebrafish DNA sequence from clone DKEYP-84F11 in linkage group 19,
             complete sequence
          Length = 182182

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   gcatggttggatggatggat 219
             ||||||||||||||||||||
Sbjct: 65036 gcatggttggatggatggat 65055



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   gcatggttggatggatggat 219
             ||||||||||||||||||||
Sbjct: 64700 gcatggttggatggatggat 64719

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 200      gcatggttggatggatggatcgag 223
                |||||| |||||||||||||||||
Sbjct: 24637169 gcatggatggatggatggatcgag 24637192

>emb|AL935193.9| Zebrafish DNA sequence from clone CH211-209H11, complete sequence
          Length = 208059

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 199    agcatggttggatggatggatcga 222
              ||||||| ||||||||||||||||
Sbjct: 170460 agcatggatggatggatggatcga 170437

>emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, complete sequence
          Length = 153155

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   gcatggttggatggatggat 219
             ||||||||||||||||||||
Sbjct: 37223 gcatggttggatggatggat 37242


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,535,086
Number of Sequences: 3902068
Number of extensions: 2535086
Number of successful extensions: 213328
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 212911
Number of HSP's gapped (non-prelim): 417
length of query: 287
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 265
effective length of database: 17,147,199,772
effective search space: 4544007939580
effective search space used: 4544007939580
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)