ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast39b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009213.1| Triticum aestivum clone wle1n.pk0057.g6:fis, full... 371 e-99
2gb|BT016719.1| Zea mays clone Contig552 mRNA sequence 113 4e-22
3gb|AY103861.1| Zea mays PCO062153 mRNA sequence 113 4e-22
4ref|XM_475913.1| Oryza sativa (japonica cultivar-group), predic... 105 9e-20
5dbj|AK073698.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 9e-20
6gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome... 100 5e-18
7gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome... 100 5e-18
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 100 5e-18
9gb|BT017838.1| Zea mays clone EL01N0509G03.c mRNA sequence 70 5e-09
10gb|BT016218.1| Zea mays clone Contig51 mRNA sequence 70 5e-09
11gb|AY108006.1| Zea mays PCO144615 mRNA sequence 70 5e-09
12ref|NM_112364.2| Arabidopsis thaliana malate dehydrogenase/ oxid... 64 3e-07
13gb|AY093788.1| Arabidopsis thaliana AT3g15020/K15M2_16 mRNA, com... 64 3e-07
14gb|AY045592.1| Arabidopsis thaliana AT3g15020/K15M2_16 mRNA, com... 64 3e-07
15emb|BX824867.1|CNS0A5NF Arabidopsis thaliana Full-length cDNA Co... 64 3e-07
16emb|BX824034.1|CNS0A5H3 Arabidopsis thaliana Full-length cDNA Co... 64 3e-07
17gb|AY089112.1| Arabidopsis thaliana clone 34499 mRNA, complete s... 64 3e-07
18ref|NM_192352.1| Oryza sativa (japonica cultivar-group), predic... 58 2e-05
19gb|AF444195.1| Oryza sativa malate dehydrogenase (MDH) mRNA, com... 58 2e-05
20dbj|AP000370.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 58 2e-05
21dbj|AK104770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
22dbj|AK071699.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
23dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.018
24dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic D... 48 0.018
25dbj|AP003053.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.018
26gb|DQ083216.1| Oryza sativa (indica cultivar-group) clone 8S2F40... 46 0.070
27gb|AC092643.2| Homo sapiens BAC clone RP11-393P9 from 4, complet... 44 0.28
28gb|AC023795.18| Homo sapiens 12 BAC RP11-242B24 (Roswell Park Ca... 42 1.1
29ref|XM_953561.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.3
30ref|XM_330808.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.3
31gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 4.3
32gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 4.3
33ref|XM_383918.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 40 4.3
34emb|AL121581.41|HS1022E24 Human DNA sequence from clone RP5-1022... 40 4.3
35gb|AC093803.3| Homo sapiens BAC clone RP11-319N12 from 4, comple... 40 4.3
36gb|AC025821.7| Homo sapiens BAC clone RP11-472F4 from 4, complet... 40 4.3
37gb|AC000353.27| Homo sapiens Chromosome 11q13 BAC Clone 18h3, co... 40 4.3
38gb|AC079776.5| Homo sapiens BAC clone RP11-315H12 from 2, comple... 40 4.3
39dbj|AP000944.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 4.3 
>gb|BT009213.1| Triticum aestivum clone wle1n.pk0057.g6:fis, full insert mRNA
            sequence
          Length = 1405

 Score =  371 bits (187), Expect = e-99
 Identities = 298/333 (89%), Gaps = 9/333 (2%)
 Strand = Plus / Minus

                                                                        
Query: 1    ctggcactacaggtttagttcagtctggcga--catcaaagccagtagtacattttattg 58
            |||| |||||||||| |||||||||||||||  ||||||||||||||   ||||||||||
Sbjct: 1205 ctggtactacaggttcagttcagtctggcgagacatcaaagccagta---cattttattg 1149

                                                                        
Query: 59   gggagcacgacgatgcctcgatgccccacggcataaccggattggggggcaacggaagcg 118
             |||||||||||| ||||||||||||| | ||| |||||| || || ||||||| |||||
Sbjct: 1148 cggagcacgacgacgcctcgatgccccgcagcacaaccgggtttggaggcaacgaaagcg 1089

                                                                        
Query: 119  gtcaaacaaaaattgcatgagttcaagggggaaccatt----ataggctgggcaggtcgc 174
            | | ||||||||||||||||||||||| | ||||| ||    |||||||| |||||||||
Sbjct: 1088 gccgaacaaaaattgcatgagttcaagtgtgaaccgttcgatataggctgagcaggtcgc 1029

                                                                        
Query: 175  cgcctagctctcctgcgcaaacttgacacccttctcgatggaagacagcagctcgccctt 234
            |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1028 cgcctagctctcctgcgcgaacttgacccccttctcgatggaagacagcagctcgccctt 969

                                                                        
Query: 235  gaggctttccagcccctccttctccaaggccgatagctcgcccagcccaagcacttcctc 294
            |||||| |||||||||||||||||||||||||| |||||||||||||| | |||||||||
Sbjct: 968  gaggctctccagcccctccttctccaaggccgacagctcgcccagccccatcacttcctc 909

                                             
Query: 295  cactccgttcttgcccagccttaccttggaggc 327
            ||||||  ||||||||||||| |||||||||||
Sbjct: 908  cactccactcttgcccagcctcaccttggaggc 876
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>gb|BT016719.1| Zea mays clone Contig552 mRNA sequence
          Length = 1581

 Score =  113 bits (57), Expect = 4e-22
 Identities = 117/137 (85%)
 Strand = Plus / Minus

                                                                        
Query: 191  gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 250
            |||||||||| |||||| ||||||||||||   ||||||||||||||| |||||||||||
Sbjct: 1179 gcaaacttgatacccttgtcgatggaagacttgagctcgcccttgaggttttccagcccc 1120

                                                                        
Query: 251  tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgttcttgccc 310
            | |||||| ||  |    ||||| ||||| |||||||||||||||||||| |||||||| 
Sbjct: 1119 ttcttctcgaactcgttgagctcacccagaccaagcacttcctccactccattcttgccg 1060

                             
Query: 311  agccttaccttggaggc 327
            ||||  |||||||||||
Sbjct: 1059 agccgaaccttggaggc 1043
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>gb|AY103861.1| Zea mays PCO062153 mRNA sequence
          Length = 1633

 Score =  113 bits (57), Expect = 4e-22
 Identities = 117/137 (85%)
 Strand = Plus / Minus

                                                                        
Query: 191  gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 250
            |||||||||| |||||| ||||||||||||   ||||||||||||||| |||||||||||
Sbjct: 1178 gcaaacttgatacccttgtcgatggaagacttgagctcgcccttgaggttttccagcccc 1119

                                                                        
Query: 251  tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgttcttgccc 310
            | |||||| ||  |    ||||| ||||| |||||||||||||||||||| |||||||| 
Sbjct: 1118 ttcttctcgaactcgttgagctcacccagaccaagcacttcctccactccattcttgccg 1059

                             
Query: 311  agccttaccttggaggc 327
            ||||  |||||||||||
Sbjct: 1058 agccgaaccttggaggc 1042
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>ref|XM_475913.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1023

 Score =  105 bits (53), Expect = 9e-20
 Identities = 116/137 (84%)
 Strand = Plus / Minus

                                                                        
Query: 191  gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 250
            ||||||||||  |||||||| || ||||||   ||||| ||||| ||| | ||||| |||
Sbjct: 1010 gcaaacttgatgcccttctcaatcgaagacttgagctcacccttcaggttctccagaccc 951

                                                                        
Query: 251  tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgttcttgccc 310
            |||||||| ||  | || |||| |||||||||||| ||||||||||||||||||||||| 
Sbjct: 950  tccttctcaaactcggaaagctggcccagcccaagtacttcctccactccgttcttgcca 891

                             
Query: 311  agccttaccttggaggc 327
            ||||||||||| |||||
Sbjct: 890  agccttacctttgaggc 874
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>dbj|AK073698.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057I02, full
            insert sequence
          Length = 1303

 Score =  105 bits (53), Expect = 9e-20
 Identities = 116/137 (84%)
 Strand = Plus / Minus

                                                                        
Query: 191  gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 250
            ||||||||||  |||||||| || ||||||   ||||| ||||| ||| | ||||| |||
Sbjct: 1067 gcaaacttgatgcccttctcaatcgaagacttgagctcacccttcaggttctccagaccc 1008

                                                                        
Query: 251  tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgttcttgccc 310
            |||||||| ||  | || |||| |||||||||||| ||||||||||||||||||||||| 
Sbjct: 1007 tccttctcaaactcggaaagctggcccagcccaagtacttcctccactccgttcttgcca 948

                             
Query: 311  agccttaccttggaggc 327
            ||||||||||| |||||
Sbjct: 947  agccttacctttgaggc 931
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>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10,
              complete sequence
          Length = 187034

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 110/130 (84%)
 Strand = Plus / Plus

                                                                          
Query: 191    gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 250
              ||||||||||  |||||||| || ||||||   ||||| ||||| ||| | ||||| |||
Sbjct: 181852 gcaaacttgatgcccttctcaatcgaagacttgagctcacccttcaggttctccagaccc 181911

                                                                          
Query: 251    tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgttcttgccc 310
              |||||||| ||  | || |||| |||||||||||| ||||||||||||||||||||||| 
Sbjct: 181912 tccttctcaaactcggaaagctggcccagcccaagtacttcctccactccgttcttgcca 181971

                        
Query: 311    agccttacct 320
              ||||||||||
Sbjct: 181972 agccttacct 181981
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>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08,
             complete sequence
          Length = 119500

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 110/130 (84%)
 Strand = Plus / Plus

                                                                         
Query: 191   gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 250
             ||||||||||  |||||||| || ||||||   ||||| ||||| ||| | ||||| |||
Sbjct: 32534 gcaaacttgatgcccttctcaatcgaagacttgagctcacccttcaggttctccagaccc 32593

                                                                         
Query: 251   tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgttcttgccc 310
             |||||||| ||  | || |||| |||||||||||| ||||||||||||||||||||||| 
Sbjct: 32594 tccttctcaaactcggaaagctggcccagcccaagtacttcctccactccgttcttgcca 32653

                       
Query: 311   agccttacct 320
             ||||||||||
Sbjct: 32654 agccttacct 32663
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 110/130 (84%)
 Strand = Plus / Plus

                                                                            
Query: 191      gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 250
                ||||||||||  |||||||| || ||||||   ||||| ||||| ||| | ||||| |||
Sbjct: 28397610 gcaaacttgatgcccttctcaatcgaagacttgagctcacccttcaggttctccagaccc 28397669

                                                                            
Query: 251      tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgttcttgccc 310
                |||||||| ||  | || |||| |||||||||||| ||||||||||||||||||||||| 
Sbjct: 28397670 tccttctcaaactcggaaagctggcccagcccaagtacttcctccactccgttcttgcca 28397729

                          
Query: 311      agccttacct 320
                ||||||||||
Sbjct: 28397730 agccttacct 28397739
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>gb|BT017838.1| Zea mays clone EL01N0509G03.c mRNA sequence
          Length = 1337

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 107/131 (81%)
 Strand = Plus / Minus

                                                                        
Query: 191  gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 250
            |||||||||| ||||||||| || ||||||   ||||||| ||||||  | |||| ||| 
Sbjct: 1039 gcaaacttgatacccttctcaatcgaagacttgagctcgctcttgagcttctccaaccct 980

                                                                        
Query: 251  tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgttcttgccc 310
            || ||||| ||| |||| ||||| || |  |||||||||||||| ||||| ||||| || 
Sbjct: 979  tctttctcaaagtccgacagctcacctaatccaagcacttcctcaactccattcttccca 920

                       
Query: 311  agccttacctt 321
            |||||||||||
Sbjct: 919  agccttacctt 909
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>gb|BT016218.1| Zea mays clone Contig51 mRNA sequence
          Length = 1263

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 107/131 (81%)
 Strand = Plus / Minus

                                                                       
Query: 191 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 250
           |||||||||| ||||||||| || ||||||   ||||||| ||||||  | |||| ||| 
Sbjct: 973 gcaaacttgatacccttctcaatcgaagacttgagctcgctcttgagcttctccaaccct 914

                                                                       
Query: 251 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgttcttgccc 310
           || ||||| ||| |||| ||||| || |  |||||||||||||| ||||| ||||| || 
Sbjct: 913 tctttctcaaagtccgacagctcacctaatccaagcacttcctcaactccattcttccca 854

                      
Query: 311 agccttacctt 321
           |||||||||||
Sbjct: 853 agccttacctt 843
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>gb|AY108006.1| Zea mays PCO144615 mRNA sequence
          Length = 701

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 107/131 (81%)
 Strand = Plus / Minus

                                                                       
Query: 191 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 250
           |||||||||| ||||||||| || ||||||   ||||||| ||||||  | |||| ||| 
Sbjct: 423 gcaaacttgatacccttctcaatcgaagacttgagctcgctcttgagcttctccaaccct 364

                                                                       
Query: 251 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgttcttgccc 310
           || ||||| ||| |||| ||||| || |  |||||||||||||| ||||| ||||| || 
Sbjct: 363 tctttctcaaagtccgacagctcacctaatccaagcacttcctcaactccattcttccca 304

                      
Query: 311 agccttacctt 321
           |||||||||||
Sbjct: 303 agccttacctt 293
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>ref|NM_112364.2| Arabidopsis thaliana malate dehydrogenase/ oxidoreductase AT3G15020
           mRNA, complete cds
          Length = 1396

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 284 agcacttcctccactccgttcttgcccagccttaccttggaggc 327
           ||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 986 agcacttcctccactccgttctttcccagtcttacctttgaggc 943
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>gb|AY093788.1| Arabidopsis thaliana AT3g15020/K15M2_16 mRNA, complete cds
          Length = 1026

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 284 agcacttcctccactccgttcttgcccagccttaccttggaggc 327
           ||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 923 agcacttcctccactccgttctttcccagtcttacctttgaggc 880
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>gb|AY045592.1| Arabidopsis thaliana AT3g15020/K15M2_16 mRNA, complete cds
          Length = 1396

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 284 agcacttcctccactccgttcttgcccagccttaccttggaggc 327
           ||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 986 agcacttcctccactccgttctttcccagtcttacctttgaggc 943
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>emb|BX824867.1|CNS0A5NF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH79ZA08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1302

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 284 agcacttcctccactccgttcttgcccagccttaccttggaggc 327
           ||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 964 agcacttcctccactccgttctttcccagtcttacctttgaggc 921
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>emb|BX824034.1|CNS0A5H3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH17ZB09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1232

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 284 agcacttcctccactccgttcttgcccagccttaccttggaggc 327
           ||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 971 agcacttcctccactccgttctttcccagtcttacctttgaggc 928
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>gb|AY089112.1| Arabidopsis thaliana clone 34499 mRNA, complete sequence
          Length = 1302

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 284 agcacttcctccactccgttcttgcccagccttaccttggaggc 327
           ||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 984 agcacttcctccactccgttctttcccagtcttacctttgaggc 941
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>ref|NM_192352.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1023

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 110/137 (80%)
 Strand = Plus / Minus

                                                                        
Query: 191  gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 250
            ||||| |||| ||||||||| || |||| |   ||||||||||| ||  | ||||| || 
Sbjct: 1013 gcaaatttgatacccttctcaattgaagccttgagctcgcccttaagattctccagtcct 954

                                                                        
Query: 251  tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgttcttgccc 310
            |||||||| ||| | || |||| ||||| |||||| |||||||| ||||| ||||| || 
Sbjct: 953  tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactccattcttccca 894

                             
Query: 311  agccttaccttggaggc 327
            ||| | |||||||||||
Sbjct: 893  agcttcaccttggaggc 877
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>gb|AF444195.1| Oryza sativa malate dehydrogenase (MDH) mRNA, complete cds; nuclear
            gene for mitochondrial product
          Length = 1257

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 110/137 (80%)
 Strand = Plus / Minus

                                                                        
Query: 191  gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 250
            ||||| |||| ||||||||| || |||| |   ||||||||||| ||  | ||||| || 
Sbjct: 1029 gcaaatttgatacccttctcaattgaagccttaagctcgcccttaagattctccagtcct 970

                                                                        
Query: 251  tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgttcttgccc 310
            |||||||| ||| | || |||| ||||| |||||| |||||||| ||||| ||||| || 
Sbjct: 969  tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactccattcttccca 910

                             
Query: 311  agccttaccttggaggc 327
            ||| | |||||||||||
Sbjct: 909  agcttcaccttggaggc 893
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>dbj|AP000370.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K15M2
          Length = 79279

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                  
Query: 284   agcacttcctccactccgttcttgcccagccttacct 320
             ||||||||||||||||||||||| ||||| |||||||
Sbjct: 53870 agcacttcctccactccgttctttcccagtcttacct 53834
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>dbj|AK104770.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A07, full
            insert sequence
          Length = 1279

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 110/137 (80%)
 Strand = Plus / Minus

                                                                        
Query: 191  gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 250
            ||||| |||| ||||||||| || |||| |   ||||||||||| ||  | ||||| || 
Sbjct: 1071 gcaaatttgatacccttctcaattgaagccttgagctcgcccttaagattctccagtcct 1012

                                                                        
Query: 251  tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgttcttgccc 310
            |||||||| ||| | || |||| ||||| |||||| |||||||| ||||| ||||| || 
Sbjct: 1011 tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactccattcttccca 952

                             
Query: 311  agccttaccttggaggc 327
            ||| | |||||||||||
Sbjct: 951  agcttcaccttggaggc 935
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>dbj|AK071699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108E15, full
            insert sequence
          Length = 1369

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 110/137 (80%)
 Strand = Plus / Minus

                                                                        
Query: 191  gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 250
            ||||| |||| ||||||||| || |||| |   ||||||||||| ||  | ||||| || 
Sbjct: 1145 gcaaatttgatacccttctcaattgaagccttgagctcgcccttaagattctccagtcct 1086

                                                                        
Query: 251  tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgttcttgccc 310
            |||||||| ||| | || |||| ||||| |||||| |||||||| ||||| ||||| || 
Sbjct: 1085 tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactccattcttccca 1026

                             
Query: 311  agccttaccttggaggc 327
            ||| | |||||||||||
Sbjct: 1025 agcttcaccttggaggc 1009
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 93/116 (80%)
 Strand = Plus / Minus

                                                                            
Query: 191      gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 250
                ||||| |||| ||||||||| || |||| |   ||||||||||| ||  | ||||| || 
Sbjct: 26187887 gcaaatttgatacccttctcaattgaagccttgagctcgcccttaagattctccagtcct 26187828

                                                                        
Query: 251      tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgttctt 306
                |||||||| ||| | || |||| ||||| |||||| |||||||| ||||| |||||
Sbjct: 26187827 tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactccattctt 26187772
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>dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
           BAC clone:OJ1159_D09
          Length = 147770

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 93/116 (80%)
 Strand = Plus / Minus

                                                                       
Query: 191 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 250
           ||||| |||| ||||||||| || |||| |   ||||||||||| ||  | ||||| || 
Sbjct: 118 gcaaatttgatacccttctcaattgaagccttgagctcgcccttaagattctccagtcct 59

                                                                   
Query: 251 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgttctt 306
           |||||||| ||| | || |||| ||||| |||||| |||||||| ||||| |||||
Sbjct: 58  tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactccattctt 3
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>dbj|AP003053.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0047B08
          Length = 57846

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 93/116 (80%)
 Strand = Plus / Minus

                                                                         
Query: 191   gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 250
             ||||| |||| ||||||||| || |||| |   ||||||||||| ||  | ||||| || 
Sbjct: 29017 gcaaatttgatacccttctcaattgaagccttgagctcgcccttaagattctccagtcct 28958

                                                                     
Query: 251   tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgttctt 306
             |||||||| ||| | || |||| ||||| |||||| |||||||| ||||| |||||
Sbjct: 28957 tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactccattctt 28902
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>gb|DQ083216.1| Oryza sativa (indica cultivar-group) clone 8S2F40 mRNA sequence
          Length = 269

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 77/95 (81%)
 Strand = Plus / Minus

                                                                       
Query: 191 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 250
           ||||||||||  |||||||| || ||||||   ||||| ||||| ||| | ||||| |||
Sbjct: 96  gcaaacttgatgcccttctcaatcgaagacttgagctcacccttcaggttctccagaccc 37

                                              
Query: 251 tccttctccaaggccgatagctcgcccagcccaag 285
           |||||||| ||  | || |||| ||||||||||||
Sbjct: 36  tccttctcaaactcggaaagctggcccagcccaag 2
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>gb|AC092643.2| Homo sapiens BAC clone RP11-393P9 from 4, complete sequence
          Length = 151902

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 239   ctttccagcccctccttctcca 260
             ||||||||||||||||||||||
Sbjct: 30162 ctttccagcccctccttctcca 30183
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>gb|AC023795.18| Homo sapiens 12 BAC RP11-242B24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 161838

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 233    ttgaggctttccagcccctccttct 257
              ||||||||||||||||||| |||||
Sbjct: 125985 ttgaggctttccagcccctgcttct 126009
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>ref|XM_953561.1| Neurospora crassa OR74A hypothetical protein (NCU09887.1) partial
           mRNA
          Length = 1017

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 249 cctccttctccaaggccgat 268
           ||||||||||||||||||||
Sbjct: 255 cctccttctccaaggccgat 274
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>ref|XM_330808.1| Neurospora crassa OR74A hypothetical protein (NCU09887.1) partial
           mRNA
          Length = 1017

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 249 cctccttctccaaggccgat 268
           ||||||||||||||||||||
Sbjct: 255 cctccttctccaaggccgat 274
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 220     cagcagctcgcccttgaggc 239
               ||||||||||||||||||||
Sbjct: 1685978 cagcagctcgcccttgaggc 1685997
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 220     cagcagctcgcccttgaggc 239
               ||||||||||||||||||||
Sbjct: 1515698 cagcagctcgcccttgaggc 1515717
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>ref|XM_383918.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03742.1)
           partial mRNA
          Length = 2415

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 196 cttgacacccttctcgatgg 215
           ||||||||||||||||||||
Sbjct: 372 cttgacacccttctcgatgg 353
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>emb|AL121581.41|HS1022E24 Human DNA sequence from clone RP5-1022E24 on chromosome 20 Contains the
              3' end of the OPRL1 gene for opiate receptor-like 1
              protein, the GPR8 gene encoding a G protein-coupled
              receptor, the KIAA0835 gene encoding a protein similar to
              the myelin transcription factor 1 (MYT1), a novel gene, 7
              CpG islands, ESTs, STSs and GSSs, complete sequence
          Length = 179888

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 246    gcccctccttctccaaggccgata 269
              |||||||||||| |||||||||||
Sbjct: 152628 gcccctccttcttcaaggccgata 152651
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>gb|AC093803.3| Homo sapiens BAC clone RP11-319N12 from 4, complete sequence
          Length = 191903

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   aaaaattgcatgagttcaag 145
             ||||||||||||||||||||
Sbjct: 81534 aaaaattgcatgagttcaag 81553
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>gb|AC025821.7| Homo sapiens BAC clone RP11-472F4 from 4, complete sequence
          Length = 178378

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    aaaaattgcatgagttcaag 145
              ||||||||||||||||||||
Sbjct: 152821 aaaaattgcatgagttcaag 152840
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>gb|AC000353.27| Homo sapiens Chromosome 11q13 BAC Clone 18h3, complete sequence
          Length = 233089

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   ccagcccaagcacttcctcc 295
             ||||||||||||||||||||
Sbjct: 96391 ccagcccaagcacttcctcc 96372
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>gb|AC079776.5| Homo sapiens BAC clone RP11-315H12 from 2, complete sequence
          Length = 198961

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 31    acatcaaagccagtagtacatttt 54
             ||||||||||||||| ||||||||
Sbjct: 24909 acatcaaagccagtattacatttt 24932
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>dbj|AP000944.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-867O8, complete
             sequence
          Length = 219246

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   ccagcccaagcacttcctcc 295
             ||||||||||||||||||||
Sbjct: 49310 ccagcccaagcacttcctcc 49291


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,796,784
Number of Sequences: 3902068
Number of extensions: 2796784
Number of successful extensions: 46667
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46531
Number of HSP's gapped (non-prelim): 133
length of query: 327
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 305
effective length of database: 17,147,199,772
effective search space: 5229895930460
effective search space used: 5229895930460
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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