>gb|AC060781.8| Mus musculus chromosome 19, clone RP23-196A19, complete sequence
          Length = 207702

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 243   aagaaaaatgccgagtcagta 263
             |||||||||||||||||||||
Sbjct: 55897 aagaaaaatgccgagtcagta 55877

>emb|BX927064.8| Zebrafish DNA sequence from clone DKEY-73N8 in linkage group 24,
             complete sequence
          Length = 181758

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 128   gagctccacatcctatctata 148
             |||||||||||||||||||||
Sbjct: 79159 gagctccacatcctatctata 79139

>gb|AC087098.8| Genomic sequence for Mus musculus, clone RP23-206M19, complete sequence
          Length = 198338

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 243    aagaaaaatgccgagtcagta 263
              |||||||||||||||||||||
Sbjct: 100224 aagaaaaatgccgagtcagta 100204

>emb|BX294125.5| Mouse DNA sequence from clone RP24-129F5 on chromosome 4, complete
             sequence
          Length = 77127

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 20    aaaatcctccttgttattttt 40
             |||||||||||||||||||||
Sbjct: 44829 aaaatcctccttgttattttt 44849

>gb|AC124333.13| Mus musculus chromosome 1, clone RP24-511E9, complete sequence
          Length = 185857

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    acaatcaaaatcctccttgt 33
             ||||||||||||||||||||
Sbjct: 20690 acaatcaaaatcctccttgt 20671

>ref|XM_483388.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1302

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 12   agacaatcaaaatcctcctt 31
            ||||||||||||||||||||
Sbjct: 1252 agacaatcaaaatcctcctt 1271

>gb|BC073353.1| Xenopus laevis MGC80770 protein, mRNA (cDNA clone MGC:80770
            IMAGE:5512775), complete cds
          Length = 3780

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 112  atgacatgcaaaaatggagc 131
            ||||||||||||||||||||
Sbjct: 3494 atgacatgcaaaaatggagc 3475

>gb|AC164300.3| Mus musculus BAC clone RP23-310J6 from chromosome 8, complete sequence
          Length = 200605

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     caaaatgctgagacaatcaa 21
             ||||||||||||||||||||
Sbjct: 50420 caaaatgctgagacaatcaa 50439

>ref|XM_660249.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.50422)
          partial mRNA
          Length = 2862

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 35 atttttcagtaacaactcca 54
          ||||||||||||||||||||
Sbjct: 38 atttttcagtaacaactcca 57

>gb|AC113043.7| Mus musculus chromosome 1, clone RP23-243C7, complete sequence
          Length = 191557

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    aacactgctacatcagtatt 78
             ||||||||||||||||||||
Sbjct: 31683 aacactgctacatcagtatt 31702

>emb|BX323561.7| Zebrafish DNA sequence from clone DKEYP-113G3, complete sequence
          Length = 167995

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    acactagatacatcatacca 189
              ||||||||||||||||||||
Sbjct: 115843 acactagatacatcatacca 115824

>ref|XM_625585.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd5_4230),
           partial mRNA
          Length = 3090

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  atttttcagtaacaactcca 54
           ||||||||||||||||||||
Sbjct: 245 atttttcagtaacaactcca 264

>gb|AC137146.9| Mus musculus chromosome 1, clone RP24-358I14, complete sequence
          Length = 189466

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    acaatcaaaatcctccttgt 33
             ||||||||||||||||||||
Sbjct: 65333 acaatcaaaatcctccttgt 65352

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 12       agacaatcaaaatcctcctt 31
                ||||||||||||||||||||
Sbjct: 25964673 agacaatcaaaatcctcctt 25964654

>gb|AC005840.2|AC005840 Homo sapiens complete sequence of a PAC clone RP1-102E24 containing
            SYB1, CD27, and SCNN1A genes
          Length = 140026

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 293  tgccttgtatatattatcct 312
            ||||||||||||||||||||
Sbjct: 9987 tgccttgtatatattatcct 9968

>gb|AC006064.10| Homo sapiens 12 PAC RP5-940J5 (Roswell Park Cancer Institute Human PAC
             Library) complete sequence
          Length = 172571

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   tgccttgtatatattatcct 312
             ||||||||||||||||||||
Sbjct: 31833 tgccttgtatatattatcct 31852

>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1003_A09
          Length = 150755

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     agacaatcaaaatcctcctt 31
              ||||||||||||||||||||
Sbjct: 150460 agacaatcaaaatcctcctt 150441

>dbj|AP003887.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
           BAC clone:OJ1186_G01
          Length = 112077

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 12  agacaatcaaaatcctcctt 31
           ||||||||||||||||||||
Sbjct: 234 agacaatcaaaatcctcctt 215

>dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1081_B12
          Length = 124741

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    agacaatcaaaatcctcctt 31
             ||||||||||||||||||||
Sbjct: 49550 agacaatcaaaatcctcctt 49531

>dbj|AK065893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043E20, full
            insert sequence
          Length = 1403

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 12   agacaatcaaaatcctcctt 31
            ||||||||||||||||||||
Sbjct: 1252 agacaatcaaaatcctcctt 1271

>emb|BX664631.6| Zebrafish DNA sequence from clone DKEY-28H18 in linkage group 22,
             complete sequence
          Length = 220242

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    aaaatcctccttgttatttt 39
             ||||||||||||||||||||
Sbjct: 61236 aaaatcctccttgttatttt 61217

>emb|AL837516.14| Mouse DNA sequence from clone RP23-234L8 on chromosome 2, complete
             sequence
          Length = 202046

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 260   agtattccaacatgaagcac 279
             ||||||||||||||||||||
Sbjct: 57226 agtattccaacatgaagcac 57207

>gb|AC132449.4| Mus musculus BAC clone RP23-183J18 from 8, complete sequence
          Length = 206312

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     caaaatgctgagacaatcaa 21
             ||||||||||||||||||||
Sbjct: 79395 caaaatgctgagacaatcaa 79376

>emb|AL731706.14| Mouse DNA sequence from clone RP23-199B10 on chromosome 2, complete
              sequence
          Length = 195301

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     ttgttatttttcagtaacaa 49
              ||||||||||||||||||||
Sbjct: 191117 ttgttatttttcagtaacaa 191098


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,663,359
Number of Sequences: 3902068
Number of extensions: 3663359
Number of successful extensions: 64083
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64026
Number of HSP's gapped (non-prelim): 57
length of query: 388
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 366
effective length of database: 17,147,199,772
effective search space: 6275875116552
effective search space used: 6275875116552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)