ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast39a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X56782.1|TA1B38 T.aestivum 1b-c38 gene for HBP-1b (leucine z... 466 e-128
2dbj|AK073601.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 3e-66
3dbj|AB037151.1| Oryza sativa (japonica cultivar-group) OsRPN10 m... 260 3e-66
4dbj|AB010740.1| Oryza sativa (japonica cultivar-group) mRNA for ... 260 3e-66
5gb|BT018579.1| Zea mays clone EL01N0445E02.d mRNA sequence 174 2e-40
6gb|AY103564.1| Zea mays PCO151364 mRNA sequence 167 4e-38
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 125 1e-25
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
9gb|AC134239.2| Oryza sativa (japonica cultivar-group) chromosome... 125 1e-25
10gb|BT017153.1| Zea mays clone EL01N0367E07.c mRNA sequence 117 3e-23
11gb|AC148217.15| Medicago truncatula clone mth2-20c19, complete s... 56 1e-04
12gb|AC121233.16| Medicago truncatula clone mth2-14g13, complete s... 56 1e-04
13ref|XM_463507.1| Oryza sativa (japonica cultivar-group), predic... 44 0.38
14ref|XM_421325.1| PREDICTED: Gallus gallus similar to putative NA... 44 0.38
15ref|NG_000009.2| Homo sapiens small histone family cluster (HFS@... 44 0.38
16emb|Z98744.2|HS193B12 Human DNA sequence from clone RP1-193B12 o... 44 0.38
17dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
18dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
19dbj|AK121856.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.38
20dbj|AK105447.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.38
21dbj|AK073077.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.38
22dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
23gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome ... 42 1.5
24gb|AC125536.3| Mus musculus BAC clone RP24-142N21 from chromosom... 42 1.5
25gb|AC130822.3| Mus musculus BAC clone RP23-249G11 from chromosom... 42 1.5
26gb|AC099525.5| Papio anubis clone RP41-277O17, complete sequence 42 1.5
27emb|X17102.1|GGNFM1D Chicken DNA for middle-molecular weight neu... 42 1.5
28emb|X05558.1|GGNFM1 Chicken mRNA for middle-molecular weight neu... 42 1.5
29emb|AL731688.14| Mouse DNA sequence from clone RP23-291K6 on chr... 42 1.5
30dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 42 1.5
31gb|AC159129.4| Mus musculus BAC clone RP23-472N21 from chromosom... 42 1.5
32dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
33gb|AC172370.2| Gallus gallus BAC clone CH261-119J18 from chromos... 42 1.5
34emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4,... 42 1.5
35gb|AF053711.1|AF053711 Serinus canaria neurofilament medium subu... 42 1.5
36gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 5.9
37gb|AC136746.15| Mus musculus chromosome 5, clone RP23-151C5, com... 40 5.9
38gb|AC113510.9| Mus musculus chromosome 5, clone RP23-378O9, comp... 40 5.9
39gb|AC121302.7| Mus musculus chromosome 13, clone RP23-163B12, co... 40 5.9
40gb|AC131762.2| Mus musculus BAC clone RP24-228J18 from chromosom... 40 5.9
41gb|AC122489.3| Mus musculus BAC clone RP24-386H10 from chromosom... 40 5.9
42gb|AC125351.3| Mus musculus BAC clone RP23-442M3 from chromosome... 40 5.9
43gb|AC161582.4| Monodelphis domestica, clone XX-27C10, complete s... 40 5.9
44emb|AL591845.27| Human DNA sequence from clone RP11-268J15 on ch... 40 5.9
45gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 5.9
46ref|XM_503409.1| Yarrowia lipolytica CLIB122, YALI0E01276g predi... 40 5.9
47emb|AL139331.19| Human DNA sequence from clone RP11-328M4 on chr... 40 5.9
48emb|AL031675.4|HS751L1 Human DNA sequence from clone RP4-751L1 o... 40 5.9
49emb|CR339060.11| Zebrafish DNA sequence from clone DKEY-276H21 i... 40 5.9
50ref|XM_795529.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 5.9
51emb|Y13919.1|SSVECADH Sus scrofa cDNA for VE-Cadherin gene 40 5.9
52emb|AL671971.8| Mouse DNA sequence from clone RP23-32J15 on chro... 40 5.9
53gb|AC009785.8| Homo sapiens chromosome 7 clone RP11-198E23, comp... 40 5.9
54dbj|AB226194.1| Aspergillus oryzae cDNA, contig sequence: AoEST3053 40 5.9
55dbj|AK148842.1| Mus musculus 2 days neonate sympathetic ganglion... 40 5.9
56gb|AC160655.2| Pan troglodytes BAC clone CH251-26F13 from chromo... 40 5.9
57gb|AC104195.10| Mus musculus chromosome 5, clone RP24-95O4, comp... 40 5.9
58gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 5.9
59dbj|AK041514.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 5.9
60ref|NM_001001649.2| Sus scrofa cadherin 5 (CDH5), mRNA 40 5.9
61gb|AC103644.15| Mus musculus chromosome 7, clone RP24-361F3, com... 40 5.9
62gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome 40 5.9
63gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 5.9
64gb|DQ176304.1| Cerapachys sp. BLF m1 voucher CASENT0053758-D01 c... 40 5.9
65gb|DQ176257.1| Cerapachys sp. BLF m1 voucher CASENT0053759-D01 c... 40 5.9
66gb|AC147250.4| Mus musculus BAC clone RP24-109P17 from 13, compl... 40 5.9
67emb|CT009764.9| Mouse DNA sequence from clone RP23-173E21 on chr... 40 5.9
68emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 5.9
69ref|NM_029749.1| Mus musculus ubiquitin specific peptidase 42 (U... 40 5.9
70gb|AC152164.14| Mus musculus chromosome 8, clone RP24-118N20, co... 40 5.9
71gb|AC160060.20| Mus musculus 10 BAC RP23-360L4 (Roswell Park Can... 40 5.9
72dbj|AB046120.1| Sus scrofa mRNA for VE cadherin, complete cds 40 5.9 
>emb|X56782.1|TA1B38 T.aestivum 1b-c38 gene for HBP-1b (leucine zipper type transcription
            factor)
          Length = 2204

 Score =  466 bits (235), Expect = e-128
 Identities = 282/298 (94%), Gaps = 6/298 (2%)
 Strand = Plus / Minus

                                                                        
Query: 141  agttcttcccatcttcaggcttgtctgtcttgtccgcctcatccttcttctcctc----- 195
            ||||||||||||||||||   |||||| ||||||| ||| ||| |||||||||||     
Sbjct: 1949 agttcttcccatcttcagaaatgtctggcttgtcctccttatctttcttctcctcctgct 1890

                                                                        
Query: 196  -tccttggccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaacac 254
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1889 ctccttggccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaacac 1830

                                                                        
Query: 255  caggaagcgaattaaggatggatgtcacaaatgatctgtcttcaaacactttgctcatat 314
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1829 caggaagcgaattaaggatggatgtcacaaatgatctgtcttcaaacactttgctcatat 1770

                                                                        
Query: 315  cagattgaccagacgcctctgcgtcctgaacagacatttgaagagccaatgccaaatcct 374
            |||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 1769 cagattgaccagccgcctcagcgtcctggacagacatttgaagagccaatgccaaatcct 1710

                                                                      
Query: 375  ggtcatctgcagcagcttctgccatagcagcatcagccacggctgcagctcctgaagc 432
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1709 ggtcatctgcagcagcttctgccatagcagcatcagccacggctgcagctcctgaagc 1652



 Score =  115 bits (58), Expect = 1e-22
 Identities = 76/81 (93%), Gaps = 2/81 (2%)
 Strand = Plus / Minus

                                                                        
Query: 24   agttatcgtcaacgcagttacaagaggatcaagtaaattcat--agcccaagtgtaaaag 81
            ||||||| ||||||||||||||||||||| ||||||||||||  ||||| ||||||||||
Sbjct: 2081 agttatcatcaacgcagttacaagaggattaagtaaattcatagagcccgagtgtaaaag 2022

                                 
Query: 82   cagctaatgcaggcaatcttc 102
            |||||||||||||||||||||
Sbjct: 2021 cagctaatgcaggcaatcttc 2001
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>dbj|AK073601.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046D23, full
            insert sequence
          Length = 1899

 Score =  260 bits (131), Expect = 3e-66
 Identities = 205/229 (89%), Gaps = 3/229 (1%)
 Strand = Plus / Minus

                                                                        
Query: 203  ccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaacaccaggaagc 262
            |||||||| |||||||| | |||||||||||| ||||||||||||||||||||||| || 
Sbjct: 1219 ccatgcaatgatgccagcaaatctttcacagaggggtcattggggtcaacaccagggaga 1160

                                                                        
Query: 263  gaattaaggatggatgtcacaaatgatctgtcttcaaacactttgctcatatcagattga 322
            || |||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 1159 gagttaaggatggatgtaacaaatgatctgtcttcaaacaccttgctcatatcagactga 1100

                                                                        
Query: 323  ccagacgcctctgcgtcctgaacagacatttgaagagccaatgccaaatcctggtcatct 382
            | |||| |  |||||||||| ||||||||||||||||| | |||||| ||||||||||||
Sbjct: 1099 ctagacccgcctgcgtcctggacagacatttgaagagctagtgccaagtcctggtcatct 1040

                                                             
Query: 383  gcagcagcttctgccatagcagcatcagccacggctgcagctcctgaag 431
             ||||||| |||||||||||||||||||||   |||||||| |||||||
Sbjct: 1039 acagcagcctctgccatagcagcatcagcc---gctgcagcccctgaag 994
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>dbj|AB037151.1| Oryza sativa (japonica cultivar-group) OsRPN10 mRNA for 26S
            proteasome regulatory particle non-ATPase subunit10,
            complete cds
          Length = 1536

 Score =  260 bits (131), Expect = 3e-66
 Identities = 205/229 (89%), Gaps = 3/229 (1%)
 Strand = Plus / Minus

                                                                        
Query: 203  ccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaacaccaggaagc 262
            |||||||| |||||||| | |||||||||||| ||||||||||||||||||||||| || 
Sbjct: 1218 ccatgcaatgatgccagcaaatctttcacagaggggtcattggggtcaacaccagggaga 1159

                                                                        
Query: 263  gaattaaggatggatgtcacaaatgatctgtcttcaaacactttgctcatatcagattga 322
            || |||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 1158 gagttaaggatggatgtaacaaatgatctgtcttcaaacaccttgctcatatcagactga 1099

                                                                        
Query: 323  ccagacgcctctgcgtcctgaacagacatttgaagagccaatgccaaatcctggtcatct 382
            | |||| |  |||||||||| ||||||||||||||||| | |||||| ||||||||||||
Sbjct: 1098 ctagacccgcctgcgtcctggacagacatttgaagagctagtgccaagtcctggtcatct 1039

                                                             
Query: 383  gcagcagcttctgccatagcagcatcagccacggctgcagctcctgaag 431
             ||||||| |||||||||||||||||||||   |||||||| |||||||
Sbjct: 1038 acagcagcctctgccatagcagcatcagcc---gctgcagcccctgaag 993
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>dbj|AB010740.1| Oryza sativa (japonica cultivar-group) mRNA for OsS5a, complete cds
          Length = 1508

 Score =  260 bits (131), Expect = 3e-66
 Identities = 205/229 (89%), Gaps = 3/229 (1%)
 Strand = Plus / Minus

                                                                        
Query: 203  ccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaacaccaggaagc 262
            |||||||| |||||||| | |||||||||||| ||||||||||||||||||||||| || 
Sbjct: 1218 ccatgcaatgatgccagcaaatctttcacagaggggtcattggggtcaacaccagggaga 1159

                                                                        
Query: 263  gaattaaggatggatgtcacaaatgatctgtcttcaaacactttgctcatatcagattga 322
            || |||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 1158 gagttaaggatggatgtaacaaatgatctgtcttcaaacaccttgctcatatcagactga 1099

                                                                        
Query: 323  ccagacgcctctgcgtcctgaacagacatttgaagagccaatgccaaatcctggtcatct 382
            | |||| |  |||||||||| ||||||||||||||||| | |||||| ||||||||||||
Sbjct: 1098 ctagacccgcctgcgtcctggacagacatttgaagagctagtgccaagtcctggtcatct 1039

                                                             
Query: 383  gcagcagcttctgccatagcagcatcagccacggctgcagctcctgaag 431
             ||||||| |||||||||||||||||||||   |||||||| |||||||
Sbjct: 1038 acagcagcctctgccatagcagcatcagcc---gctgcagcccctgaag 993
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>gb|BT018579.1| Zea mays clone EL01N0445E02.d mRNA sequence
          Length = 1650

 Score =  174 bits (88), Expect = 2e-40
 Identities = 202/240 (84%)
 Strand = Plus / Minus

                                                                        
Query: 193  ctctccttggccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaac 252
            |||||| ||||  ||||| |||||||| | |||||| |||||||| |||||||| |||||
Sbjct: 1257 ctctccctggctgtgcaatgatgccagcaaatctttaacagatggatcattgggatcaac 1198

                                                                        
Query: 253  accaggaagcgaattaaggatggatgtcacaaatgatctgtcttcaaacactttgctcat 312
            ||||||||||||||||||||| |||| |||||||| ||||||||||||||| || |||||
Sbjct: 1197 accaggaagcgaattaaggatagatgacacaaatgttctgtcttcaaacaccttactcat 1138

                                                                        
Query: 313  atcagattgaccagacgcctctgcgtcctgaacagacatttgaagagccaatgccaaatc 372
            |||||  | ||  |||   | ||| ||||| |||||||||||||||||||| || || ||
Sbjct: 1137 atcagtgtcactggacatgtttgcatcctggacagacatttgaagagccaacgctaagtc 1078

                                                                        
Query: 373  ctggtcatctgcagcagcttctgccatagcagcatcagccacggctgcagctcctgaagc 432
              ||||| ||||| |||||||||||||||| |  |||| ||| ||||||| |||||||||
Sbjct: 1077 agggtcaactgcaccagcttctgccatagcggagtcagtcacagctgcagatcctgaagc 1018
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>gb|AY103564.1| Zea mays PCO151364 mRNA sequence
          Length = 1318

 Score =  167 bits (84), Expect = 4e-38
 Identities = 201/240 (83%)
 Strand = Plus / Minus

                                                                        
Query: 193  ctctccttggccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaac 252
            |||||| ||||  ||||| |||||||| | |||||| |||||||| |||||||| |||||
Sbjct: 1263 ctctccctggctgtgcaatgatgccagcaaatctttaacagatggatcattgggatcaac 1204

                                                                        
Query: 253  accaggaagcgaattaaggatggatgtcacaaatgatctgtcttcaaacactttgctcat 312
            ||||||||||||||||||||| |||| |||||| | ||||||||||||||| || |||||
Sbjct: 1203 accaggaagcgaattaaggatagatgacacaaacgttctgtcttcaaacaccttactcat 1144

                                                                        
Query: 313  atcagattgaccagacgcctctgcgtcctgaacagacatttgaagagccaatgccaaatc 372
            |||||  | ||  |||   | ||| ||||| |||||||||||||||||||| || || ||
Sbjct: 1143 atcagtgtcactggacatgtttgcatcctggacagacatttgaagagccaacgctaagtc 1084

                                                                        
Query: 373  ctggtcatctgcagcagcttctgccatagcagcatcagccacggctgcagctcctgaagc 432
              ||||| ||||| |||||||||||||||| |  |||| ||| ||||||| |||||||||
Sbjct: 1083 agggtcaactgcaccagcttctgccatagcggagtcagtcacagctgcagatcctgaagc 1024
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  125 bits (63), Expect = 1e-25
 Identities = 87/95 (91%)
 Strand = Plus / Plus

                                                                           
Query: 266     ttaaggatggatgtcacaaatgatctgtcttcaaacactttgctcatatcagattgacca 325
               |||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||| |
Sbjct: 7550462 ttaaggatggatgtaacaaatgatctgtcttcaaacaccttgctcatatcagactgacta 7550521

                                                  
Query: 326     gacgcctctgcgtcctgaacagacatttgaagagc 360
               ||| |  |||||||||| |||||||||||||||||
Sbjct: 7550522 gacccgcctgcgtcctggacagacatttgaagagc 7550556



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                       
Query: 203     ccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaacaccagg 258
               |||||||| |||||||| | |||||||||||| |||||||||||||||||||||||
Sbjct: 7550306 ccatgcaatgatgccagcaaatctttcacagaggggtcattggggtcaacaccagg 7550361



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 61/68 (89%), Gaps = 3/68 (4%)
 Strand = Plus / Plus

                                                                           
Query: 364     tgccaaatcctggtcatctgcagcagcttctgccatagcagcatcagccacggctgcagc 423
               |||||| |||||||||||| ||||||| |||||||||||||||||||||   ||||||||
Sbjct: 7550797 tgccaagtcctggtcatctacagcagcctctgccatagcagcatcagcc---gctgcagc 7550853

                       
Query: 424     tcctgaag 431
                |||||||
Sbjct: 7550854 ccctgaag 7550861
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  125 bits (63), Expect = 1e-25
 Identities = 87/95 (91%)
 Strand = Plus / Plus

                                                                           
Query: 266     ttaaggatggatgtcacaaatgatctgtcttcaaacactttgctcatatcagattgacca 325
               |||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||| |
Sbjct: 7548297 ttaaggatggatgtaacaaatgatctgtcttcaaacaccttgctcatatcagactgacta 7548356

                                                  
Query: 326     gacgcctctgcgtcctgaacagacatttgaagagc 360
               ||| |  |||||||||| |||||||||||||||||
Sbjct: 7548357 gacccgcctgcgtcctggacagacatttgaagagc 7548391



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                       
Query: 203     ccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaacaccagg 258
               |||||||| |||||||| | |||||||||||| |||||||||||||||||||||||
Sbjct: 7548141 ccatgcaatgatgccagcaaatctttcacagaggggtcattggggtcaacaccagg 7548196



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 61/68 (89%), Gaps = 3/68 (4%)
 Strand = Plus / Plus

                                                                           
Query: 364     tgccaaatcctggtcatctgcagcagcttctgccatagcagcatcagccacggctgcagc 423
               |||||| |||||||||||| ||||||| |||||||||||||||||||||   ||||||||
Sbjct: 7548632 tgccaagtcctggtcatctacagcagcctctgccatagcagcatcagcc---gctgcagc 7548688

                       
Query: 424     tcctgaag 431
                |||||||
Sbjct: 7548689 ccctgaag 7548696
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>gb|AC134239.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0042A11, complete sequence
          Length = 113049

 Score =  125 bits (63), Expect = 1e-25
 Identities = 87/95 (91%)
 Strand = Plus / Plus

                                                                         
Query: 266   ttaaggatggatgtcacaaatgatctgtcttcaaacactttgctcatatcagattgacca 325
             |||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||| |
Sbjct: 79358 ttaaggatggatgtaacaaatgatctgtcttcaaacaccttgctcatatcagactgacta 79417

                                                
Query: 326   gacgcctctgcgtcctgaacagacatttgaagagc 360
             ||| |  |||||||||| |||||||||||||||||
Sbjct: 79418 gacccgcctgcgtcctggacagacatttgaagagc 79452



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                     
Query: 203   ccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaacaccagg 258
             |||||||| |||||||| | |||||||||||| |||||||||||||||||||||||
Sbjct: 79202 ccatgcaatgatgccagcaaatctttcacagaggggtcattggggtcaacaccagg 79257



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 61/68 (89%), Gaps = 3/68 (4%)
 Strand = Plus / Plus

                                                                         
Query: 364   tgccaaatcctggtcatctgcagcagcttctgccatagcagcatcagccacggctgcagc 423
             |||||| |||||||||||| ||||||| |||||||||||||||||||||   ||||||||
Sbjct: 79693 tgccaagtcctggtcatctacagcagcctctgccatagcagcatcagcc---gctgcagc 79749

                     
Query: 424   tcctgaag 431
              |||||||
Sbjct: 79750 ccctgaag 79757
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>gb|BT017153.1| Zea mays clone EL01N0367E07.c mRNA sequence
          Length = 1189

 Score =  117 bits (59), Expect = 3e-23
 Identities = 143/171 (83%)
 Strand = Plus / Minus

                                                                       
Query: 191 tcctctccttggccatgcaaagatgccagtagatctttcacagatgggtcattggggtca 250
           |||||||| ||||  ||||| |||||||  | |||||| | |||||| |||||||| |||
Sbjct: 990 tcctctccctggctgtgcaatgatgccaacaaatctttaatagatggatcattgggatca 931

                                                                       
Query: 251 acaccaggaagcgaattaaggatggatgtcacaaatgatctgtcttcaaacactttgctc 310
           ||||||||||||||||||||||| |||| |||||| | ||||||||||||||| || |||
Sbjct: 930 acaccaggaagcgaattaaggatagatgacacaaacgttctgtcttcaaacaccttactc 871

                                                              
Query: 311 atatcagattgaccagacgcctctgcgtcctgaacagacatttgaagagcc 361
           |||||||  | ||  |||   | ||| ||||| ||||||||||||||||||
Sbjct: 870 atatcagtgtcactggacatgtttgcatcctggacagacatttgaagagcc 820
to top
>gb|AC148217.15| Medicago truncatula clone mth2-20c19, complete sequence
          Length = 113210

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 223   atctttcacagatgggtcattggggtcaacaccaggaagc 262
             |||||| |||||||||||||| |||||||| |||||||||
Sbjct: 89777 atctttgacagatgggtcatttgggtcaaccccaggaagc 89816
to top
>gb|AC121233.16| Medicago truncatula clone mth2-14g13, complete sequence
          Length = 129617

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 223   atctttcacagatgggtcattggggtcaacaccaggaagc 262
             |||||| |||||||||||||| |||||||| |||||||||
Sbjct: 22550 atctttgacagatgggtcatttgggtcaaccccaggaagc 22589
to top
>ref|XM_463507.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1842

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 174 ccgcctcatccttcttctcctc 195
           ||||||||||||||||||||||
Sbjct: 166 ccgcctcatccttcttctcctc 145
to top
>ref|XM_421325.1| PREDICTED: Gallus gallus similar to putative NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex 1 (LOC423415), mRNA
          Length = 1156

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 178 ctcatccttcttctcctctccttggc 203
           |||||||||||| |||||||||||||
Sbjct: 261 ctcatccttcttttcctctccttggc 236
to top
>ref|NG_000009.2| Homo sapiens small histone family cluster (HFS@) on chromosome 6
          Length = 91567

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 377   tcatctgcagcagcttctgccatagc 402
             ||||||||| ||||||||||||||||
Sbjct: 42594 tcatctgcatcagcttctgccatagc 42569
to top
>emb|Z98744.2|HS193B12 Human DNA sequence from clone RP1-193B12 on chromosome 6p21.3-22.3
             Contains the H2AFD, H2BFD, H2AFI, H1F5, H3FF, H4FK, H3FJ,
             H2AFN, and H2BFN histone genes, the OR2B2 gene for
             olfactory receptor 2B2, histone H2B family member I
             pseudogene H2BFIP, a hypothetical protein pseudogene,
             ESTs, STSs, GSSs and CpG islands, complete sequence
          Length = 100374

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 377   tcatctgcagcagcttctgccatagc 402
             ||||||||| ||||||||||||||||
Sbjct: 15599 tcatctgcatcagcttctgccatagc 15624
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 174      ccgcctcatccttcttctcctc 195
                ||||||||||||||||||||||
Sbjct: 37942554 ccgcctcatccttcttctcctc 37942533
to top
>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0698A10
          Length = 137348

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 174   ccgcctcatccttcttctcctc 195
             ||||||||||||||||||||||
Sbjct: 23498 ccgcctcatccttcttctcctc 23477
to top
>dbj|AK121856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033102G02, full
           insert sequence
          Length = 2439

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 174 ccgcctcatccttcttctcctc 195
           ||||||||||||||||||||||
Sbjct: 430 ccgcctcatccttcttctcctc 409
to top
>dbj|AK105447.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-B06, full
           insert sequence
          Length = 1512

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 174 ccgcctcatccttcttctcctc 195
           ||||||||||||||||||||||
Sbjct: 334 ccgcctcatccttcttctcctc 313
to top
>dbj|AK073077.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033015J08, full
           insert sequence
          Length = 2388

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 174 ccgcctcatccttcttctcctc 195
           ||||||||||||||||||||||
Sbjct: 379 ccgcctcatccttcttctcctc 358
to top
>dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0648C09
          Length = 107522

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 174   ccgcctcatccttcttctcctc 195
             ||||||||||||||||||||||
Sbjct: 38830 ccgcctcatccttcttctcctc 38809
to top
>gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome 8, complete sequence
          Length = 218698

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 374  tggtcatctgcagcagcttctgcca 398
            ||||||||||||| |||||||||||
Sbjct: 7975 tggtcatctgcagaagcttctgcca 7999
to top
>gb|AC125536.3| Mus musculus BAC clone RP24-142N21 from chromosome 8, complete sequence
          Length = 199356

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 374   tggtcatctgcagcagcttctgcca 398
             ||||||||||||| |||||||||||
Sbjct: 10903 tggtcatctgcagaagcttctgcca 10879
to top
>gb|AC130822.3| Mus musculus BAC clone RP23-249G11 from chromosome 6, complete sequence
          Length = 186431

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 177    cctcatccttcttctcctctccttg 201
              |||||||||||||| ||||||||||
Sbjct: 146659 cctcatccttcttcccctctccttg 146635
to top
>gb|AC099525.5| Papio anubis clone RP41-277O17, complete sequence
          Length = 163567

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 378   catctgcagcagcttctgcca 398
             |||||||||||||||||||||
Sbjct: 83809 catctgcagcagcttctgcca 83829
to top
>emb|X17102.1|GGNFM1D Chicken DNA for middle-molecular weight neurofilament gene
          Length = 5638

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 175  cgcctcatccttcttctcctc 195
            |||||||||||||||||||||
Sbjct: 4691 cgcctcatccttcttctcctc 4671
to top
>emb|X05558.1|GGNFM1 Chicken mRNA for middle-molecular weight neurofilament fragment
            (NF-M)
          Length = 2148

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 175  cgcctcatccttcttctcctc 195
            |||||||||||||||||||||
Sbjct: 1254 cgcctcatccttcttctcctc 1234
to top
>emb|AL731688.14| Mouse DNA sequence from clone RP23-291K6 on chromosome 11 Contains the
             3' end of the Slit3 gene for slit homolog 3 (Drosophila),
             complete sequence
          Length = 113164

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 289   tctgtcttcaaacactttgct 309
             |||||||||||||||||||||
Sbjct: 38005 tctgtcttcaaacactttgct 37985
to top
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 176     gcctcatccttcttctcctct 196
               |||||||||||||||||||||
Sbjct: 1198373 gcctcatccttcttctcctct 1198353
to top
>gb|AC159129.4| Mus musculus BAC clone RP23-472N21 from chromosome 6, complete sequence
          Length = 181390

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 177    cctcatccttcttctcctctccttg 201
              |||||||||||||| ||||||||||
Sbjct: 112071 cctcatccttcttcccctctccttg 112095
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 180     catccttcttctcctctcctt 200
               |||||||||||||||||||||
Sbjct: 5463020 catccttcttctcctctcctt 5463040
to top
>gb|AC172370.2| Gallus gallus BAC clone CH261-119J18 from chromosome ul, complete
              sequence
          Length = 260878

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 400    agcagcatcagccacggctgc 420
              |||||||||||||||||||||
Sbjct: 134427 agcagcatcagccacggctgc 134407
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>emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01,
             complete sequence
          Length = 150283

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 180   catccttcttctcctctcctt 200
             |||||||||||||||||||||
Sbjct: 17650 catccttcttctcctctcctt 17670
to top
>gb|AF053711.1|AF053711 Serinus canaria neurofilament medium subunit mRNA, complete cds
          Length = 1774

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 175  cgcctcatccttcttctcctc 195
            |||||||||||||||||||||
Sbjct: 1257 cgcctcatccttcttctcctc 1237
to top
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 413    acggctgcagctcctgaagc 432
              ||||||||||||||||||||
Sbjct: 336965 acggctgcagctcctgaagc 336984
to top
>gb|AC136746.15| Mus musculus chromosome 5, clone RP23-151C5, complete sequence
          Length = 195530

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 376   gtcatctgcagcagcttctg 395
             ||||||||||||||||||||
Sbjct: 92999 gtcatctgcagcagcttctg 93018
to top
>gb|AC113510.9| Mus musculus chromosome 5, clone RP23-378O9, complete sequence
          Length = 171806

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      aattctcttggcatttgagt 26
              ||||||||||||||||||||
Sbjct: 152430 aattctcttggcatttgagt 152449
to top
>gb|AC121302.7| Mus musculus chromosome 13, clone RP23-163B12, complete sequence
          Length = 190256

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    atgtgcatgaagcaacaaag 133
              ||||||||||||||||||||
Sbjct: 153866 atgtgcatgaagcaacaaag 153847
to top
>gb|AC131762.2| Mus musculus BAC clone RP24-228J18 from chromosome 12, complete
             sequence
          Length = 157435

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     atacaaattctcttggcatt 21
             ||||||||||||||||||||
Sbjct: 65440 atacaaattctcttggcatt 65459
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>gb|AC122489.3| Mus musculus BAC clone RP24-386H10 from chromosome 13, complete sequence
          Length = 191710

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    atgtgcatgaagcaacaaag 133
              ||||||||||||||||||||
Sbjct: 184453 atgtgcatgaagcaacaaag 184434
to top
>gb|AC125351.3| Mus musculus BAC clone RP23-442M3 from chromosome 12, complete sequence
          Length = 188024

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   ggctgcagctcctgaagctc 434
             ||||||||||||||||||||
Sbjct: 96050 ggctgcagctcctgaagctc 96069
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>gb|AC161582.4| Monodelphis domestica, clone XX-27C10, complete sequence
          Length = 139570

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   tcccatcttcaggcttgtct 166
             ||||||||||||||||||||
Sbjct: 14078 tcccatcttcaggcttgtct 14059
to top
>emb|AL591845.27| Human DNA sequence from clone RP11-268J15 on chromosome 1 Contains the
             3' end of a novel gene for thyroid hormone
             receptor-associated protein, 150 kDa subunit (TRAP150)
             (FLJ22082), a novel transcript (FLJ22938), a gene for a
             novel protein (FLJ10647), the 3' end of a gene for
             Ser/Thr-like kinase (MGC4796) and two CpG islands,
             complete sequence
          Length = 104307

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 322   accagacgcctctgcgtcct 341
             ||||||||||||||||||||
Sbjct: 43720 accagacgcctctgcgtcct 43739
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 377     tcatctgcagcagcttctgc 396
               ||||||||||||||||||||
Sbjct: 4324636 tcatctgcagcagcttctgc 4324655
to top
>ref|XM_503409.1| Yarrowia lipolytica CLIB122, YALI0E01276g predicted mRNA
          Length = 4020

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 173  tccgcctcatccttcttctc 192
            ||||||||||||||||||||
Sbjct: 2177 tccgcctcatccttcttctc 2158
to top
>emb|AL139331.19| Human DNA sequence from clone RP11-328M4 on chromosome 6 Contains a
             novel gene,  the FOXP4 gene for forkhead box P4 and five
             CpG islands, complete sequence
          Length = 180547

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   tcatccttcttctcctctcc 198
             ||||||||||||||||||||
Sbjct: 32925 tcatccttcttctcctctcc 32906
to top
>emb|AL031675.4|HS751L1 Human DNA sequence from clone RP4-751L1 on chromosome 20p11.2-12.1
             Contains part of the PCSK2 gene for proprotein convertase
             subtilisin/kexin type 2, complete sequence
          Length = 89521

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   atgatctgtcttcaaacact 304
             ||||||||||||||||||||
Sbjct: 70256 atgatctgtcttcaaacact 70237
to top
>emb|CR339060.11| Zebrafish DNA sequence from clone DKEY-276H21 in linkage group 23,
             complete sequence
          Length = 80855

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   catgtgcatgaagcaacaaa 132
             ||||||||||||||||||||
Sbjct: 19449 catgtgcatgaagcaacaaa 19468
to top
>ref|XM_795529.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC590804 (LOC590804), mRNA
          Length = 675

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 cctcatccttcttctcctct 196
           ||||||||||||||||||||
Sbjct: 346 cctcatccttcttctcctct 327



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 164 tctgtcttgtccgcctcatccttcttctcctc 195
           |||||| | ||| |||||||||||||||||||
Sbjct: 329 tctgtcatctcctcctcatccttcttctcctc 298
to top
>emb|Y13919.1|SSVECADH Sus scrofa cDNA for VE-Cadherin gene
          Length = 3888

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 172  gtccgcctcatccttcttctcctc 195
            ||||||||||||||||||| ||||
Sbjct: 2266 gtccgcctcatccttcttcacctc 2243
to top
>emb|AL671971.8| Mouse DNA sequence from clone RP23-32J15 on chromosome 11 Contains
            the Foxi1 gene for forkhead box I1 and the 3' end of the
            Dock2 gene for dedicator of cyto-kinesis 2, complete
            sequence
          Length = 203257

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 177  cctcatccttcttctcctct 196
            ||||||||||||||||||||
Sbjct: 2665 cctcatccttcttctcctct 2684
to top
>gb|AC009785.8| Homo sapiens chromosome 7 clone RP11-198E23, complete sequence
          Length = 179145

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 168    tcttgtccgcctcatccttcttctcctc 195
              |||||||| |||| ||||||||||||||
Sbjct: 114561 tcttgtcctcctcctccttcttctcctc 114588
to top
>dbj|AB226194.1| Aspergillus oryzae cDNA, contig sequence: AoEST3053
          Length = 1500

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 cctcatccttcttctcctct 196
           ||||||||||||||||||||
Sbjct: 440 cctcatccttcttctcctct 421
to top
>dbj|AK148842.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
            full-length enriched library, clone:7120454A02
            product:unclassifiable, full insert sequence
          Length = 2290

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 7    aattctcttggcatttgagt 26
            ||||||||||||||||||||
Sbjct: 1683 aattctcttggcatttgagt 1702
to top
>gb|AC160655.2| Pan troglodytes BAC clone CH251-26F13 from chromosome unknown, complete
             sequence
          Length = 197508

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   tcatccttcttctcctctcc 198
             ||||||||||||||||||||
Sbjct: 41910 tcatccttcttctcctctcc 41929
to top
>gb|AC104195.10| Mus musculus chromosome 5, clone RP24-95O4, complete sequence
          Length = 214251

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     aattctcttggcatttgagt 26
             ||||||||||||||||||||
Sbjct: 58044 aattctcttggcatttgagt 58063
to top
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    tccgcctcatccttcttctc 192
              ||||||||||||||||||||
Sbjct: 866510 tccgcctcatccttcttctc 866529
to top
>dbj|AK041514.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A630018G05 product:weakly similar to CDNA
           FLJ12697 FIS, CLONE NT2RP1000522, WEAKLY SIMILAR TO
           UBIQUITIN CARBOXYL-TERMINAL HYDROLASE DUB-1 (EC
           3.1.2.15) (FRAGMENT) [Homo sapiens], full insert
           sequence
          Length = 2554

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 376 gtcatctgcagcagcttctg 395
           ||||||||||||||||||||
Sbjct: 240 gtcatctgcagcagcttctg 221
to top
>ref|NM_001001649.2| Sus scrofa cadherin 5 (CDH5), mRNA
          Length = 3888

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 172  gtccgcctcatccttcttctcctc 195
            ||||||||||||||||||| ||||
Sbjct: 2266 gtccgcctcatccttcttcacctc 2243
to top
>gb|AC103644.15| Mus musculus chromosome 7, clone RP24-361F3, complete sequence
          Length = 171338

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 380    tctgcagcagcttctgccat 399
              ||||||||||||||||||||
Sbjct: 125273 tctgcagcagcttctgccat 125254
to top
>gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome
          Length = 996422

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 358    agccaatgccaaatcctggt 377
              ||||||||||||||||||||
Sbjct: 597238 agccaatgccaaatcctggt 597219



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 358    agccaatgccaaatcctggt 377
              ||||||||||||||||||||
Sbjct: 478868 agccaatgccaaatcctggt 478887
to top
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 380     tctgcagcagcttctgccat 399
               ||||||||||||||||||||
Sbjct: 1521748 tctgcagcagcttctgccat 1521767
to top
>gb|DQ176304.1| Cerapachys sp. BLF m1 voucher CASENT0053758-D01 cytochrome oxidase
           subunit 1 (COI) gene, partial cds; mitochondrial
          Length = 657

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 181 atccttcttctcctctcctt 200
           ||||||||||||||||||||
Sbjct: 529 atccttcttctcctctcctt 548
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>gb|DQ176257.1| Cerapachys sp. BLF m1 voucher CASENT0053759-D01 cytochrome oxidase
           subunit 1 (COI) gene, partial cds; mitochondrial
          Length = 419

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 181 atccttcttctcctctcctt 200
           ||||||||||||||||||||
Sbjct: 291 atccttcttctcctctcctt 310
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>gb|AC147250.4| Mus musculus BAC clone RP24-109P17 from 13, complete sequence
          Length = 196150

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    tcctcccttcttcatgtgca 120
              ||||||||||||||||||||
Sbjct: 119236 tcctcccttcttcatgtgca 119217
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>emb|CT009764.9| Mouse DNA sequence from clone RP23-173E21 on chromosome 12, complete
            sequence
          Length = 214925

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 2    atacaaattctcttggcatt 21
            ||||||||||||||||||||
Sbjct: 4519 atacaaattctcttggcatt 4500
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia
              lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    tccgcctcatccttcttctc 192
              ||||||||||||||||||||
Sbjct: 146608 tccgcctcatccttcttctc 146589
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>ref|NM_029749.1| Mus musculus ubiquitin specific peptidase 42 (Usp42), mRNA
          Length = 4456

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 376  gtcatctgcagcagcttctg 395
            ||||||||||||||||||||
Sbjct: 1988 gtcatctgcagcagcttctg 1969
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>gb|AC152164.14| Mus musculus chromosome 8, clone RP24-118N20, complete sequence
          Length = 185586

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 182  tccttcttctcctctccttg 201
            ||||||||||||||||||||
Sbjct: 6223 tccttcttctcctctccttg 6204
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>gb|AC160060.20| Mus musculus 10 BAC RP23-360L4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 229681

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 389    gcttctgccatagcagcatc 408
              ||||||||||||||||||||
Sbjct: 178286 gcttctgccatagcagcatc 178267
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>dbj|AB046120.1| Sus scrofa mRNA for VE cadherin, complete cds
          Length = 2927

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 172  gtccgcctcatccttcttctcctc 195
            ||||||||||||||||||| ||||
Sbjct: 2187 gtccgcctcatccttcttcacctc 2164


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,662,879
Number of Sequences: 3902068
Number of extensions: 4662879
Number of successful extensions: 110839
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110492
Number of HSP's gapped (non-prelim): 346
length of query: 436
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 414
effective length of database: 17,147,199,772
effective search space: 7098940705608
effective search space used: 7098940705608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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