ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast39a04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CRLF2_MOUSE (Q8CII9) Cytokine receptor-like factor 2 precursor (... 29 2.6

>CRLF2_MOUSE (Q8CII9) Cytokine receptor-like factor 2 precursor (Type I cytokine|
           receptor delta 1) (Cytokine receptor-like molecule 2)
           (CRLM-2) (Thymic stromal lymphopoietin protein receptor)
           (TSLPR)
          Length = 359

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -3

Query: 203 PPCRTTEV*RPQDDVSSTRRRRHEPEDGNLVMKVVPTPAS 84
           PP RT E    +DD+   + +R EPEDG  +   VP P S
Sbjct: 296 PPARTEE----EDDLIHPKAKRVEPEDGTSLC-TVPRPPS 330


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,345,960
Number of Sequences: 219361
Number of extensions: 832878
Number of successful extensions: 1925
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1925
length of database: 80,573,946
effective HSP length: 86
effective length of database: 61,708,900
effective search space used: 1481013600
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top