ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast39a03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT024067.1| Zea mays clone EL01N0448C11 mRNA sequence 170 2e-39
2gb|AY107161.1| Zea mays PCO101731 mRNA sequence 155 1e-34
3ref|XM_473575.1| Oryza sativa (japonica cultivar-group), predic... 133 5e-28
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 133 5e-28
5dbj|AK110251.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 5e-28
6dbj|AK110034.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 5e-28
7emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4,... 133 5e-28
8dbj|AK120348.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
9dbj|AK065277.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
10gb|AC087384.13| Homo sapiens chromosome 8, clone RP11-689G24, co... 44 0.37
11gb|AC133883.6| Homo sapiens chromosome 8, clone RP11-945N8, comp... 44 0.37
12emb|AL139320.18| Human DNA sequence from clone RP11-154C3 on chr... 42 1.5
13gb|AC116309.2| Homo sapiens chromosome 5 clone RP11-106J9, compl... 42 1.5
14gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, co... 40 5.8
15gb|AC161528.14| Mus musculus chromosome 8, clone RP23-369H18, co... 40 5.8
16ref|NM_186991.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
17gb|AY273289.1| Uncultured sulfate-reducing bacterium clone LFdsr... 40 5.8
18gb|AY273265.1| Uncultured sulfate-reducing bacterium clone LFdsr... 40 5.8
19ref|XM_414901.1| PREDICTED: Gallus gallus similar to ATP-binding... 40 5.8
20gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 5.8
21gb|BT009533.1| Triticum aestivum clone wr1.pk0133.f5:fis, full i... 40 5.8
22gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 40 5.8
23gb|DQ301630.1| Thanatephorus cucumeris strain TO4 ATP synthase s... 40 5.8
24gb|DQ301629.1| Thanatephorus cucumeris strain TO1 ATP synthase s... 40 5.8
25gb|DQ301628.1| Thanatephorus cucumeris strain SJ57 ATP synthase ... 40 5.8
26gb|DQ301627.1| Thanatephorus cucumeris strain SJ34 ATP synthase ... 40 5.8
27gb|DQ301624.1| Thanatephorus cucumeris strain SJ02 ATP synthase ... 40 5.8
28gb|DQ301620.1| Thanatephorus cucumeris strain CBS 346.84 ATP syn... 40 5.8
29gb|DQ301604.1| Thanatephorus cucumeris strain AG-4HGI ATP syntha... 40 5.8
30gb|DQ301598.1| Thanatephorus cucumeris strain AG-1-IA ATP syntha... 40 5.8
31gb|DQ301596.1| Ceratobasidium sp. CBS 700.82 ATP synthase subuni... 40 5.8
32gb|DQ301588.1| Ceratobasidium sp. CBS 346.84 ATP synthase subuni... 40 5.8
33gb|DQ056142.1| Coprinellus disseminatus strain C345.1 putative G... 40 5.8
34dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
35dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
36dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
37gb|AF111170.3|AF111170 Homo sapiens 14q32 Jagged2 gene, complete... 40 5.8
38emb|AL512355.6|CNS07EF4 Human chromosome 14 DNA sequence BAC R-1... 40 5.8
39emb|AL512356.6|CNS07EF5 Human chromosome 14 DNA sequence BAC R-4... 40 5.8 
>gb|BT024067.1| Zea mays clone EL01N0448C11 mRNA sequence
          Length = 2351

 Score =  170 bits (86), Expect = 2e-39
 Identities = 170/198 (85%)
 Strand = Plus / Minus

                                                                        
Query: 230  aagctcacatcggcggcagccatgtgaggaccagggggctccggactacgtgaacgccgt 289
            ||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||||
Sbjct: 2119 aagctcacatcggtggcagccatgtgaggacaagggggctccggacgatgtggacgccgt 2060

                                                                        
Query: 290  cgctccatgacagggcaccgtactccggtgttttctgagcggccttggtcctcaccgtaa 349
            ||||||| ||||| || ||| |||||||||| ||||| || ||||||||  ||| ||| |
Sbjct: 2059 cgctccaggacagcgctccgaactccggtgtcttctgggcagccttggttgtcatcgtca 2000

                                                                        
Query: 350  ccttgtaggcgagcttctggtttgtgctgctgaagtgcagggtgctcggctcgaccacga 409
            |||||||||  ||||||||||| | |||  |||||||||||||||| || ||||| || |
Sbjct: 1999 ccttgtaggttagcttctggttcgagcttgtgaagtgcagggtgcttggttcgacgacaa 1940

                              
Query: 410  cgtcggcgcctttgaact 427
             ||| |||||||||||||
Sbjct: 1939 tgtctgcgcctttgaact 1922



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 31/31 (100%)
 Strand = Plus / Minus

                                           
Query: 19   actgaacatttggaataagcatgaatacatt 49
            |||||||||||||||||||||||||||||||
Sbjct: 2313 actgaacatttggaataagcatgaatacatt 2283
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>gb|AY107161.1| Zea mays PCO101731 mRNA sequence
          Length = 1572

 Score =  155 bits (78), Expect = 1e-34
 Identities = 168/198 (84%)
 Strand = Plus / Minus

                                                                        
Query: 230  aagctcacatcggcggcagccatgtgaggaccagggggctccggactacgtgaacgccgt 289
            ||||||||||||| ||||||||||||||||| |||||||||||||| | ||| |||||||
Sbjct: 1564 aagctcacatcggtggcagccatgtgaggacaagggggctccggacgatgtggacgccgt 1505

                                                                        
Query: 290  cgctccatgacagggcaccgtactccggtgttttctgagcggccttggtcctcaccgtaa 349
            ||||| | ||||| || ||| |||||||||| ||||| || ||||||||  ||| ||| |
Sbjct: 1504 cgctcaaagacagcgctccgaactccggtgtcttctgggcagccttggttgtcatcgtca 1445

                                                                        
Query: 350  ccttgtaggcgagcttctggtttgtgctgctgaagtgcagggtgctcggctcgaccacga 409
            |||||||||  ||||||||||| |  ||  |||||||||||||||| || ||||| || |
Sbjct: 1444 ccttgtaggttagcttctggttcgaacttgtgaagtgcagggtgcttggttcgacgacaa 1385

                              
Query: 410  cgtcggcgcctttgaact 427
             ||| |||||||||||||
Sbjct: 1384 tgtctgcgcctttgaact 1367
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>ref|XM_473575.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2331

 Score =  133 bits (67), Expect = 5e-28
 Identities = 157/187 (83%)
 Strand = Plus / Minus

                                                                        
Query: 244  ggcagccatgtgaggaccagggggctccggactacgtgaacgccgtcgctccatgacagg 303
            ||||||||||| ||||| |  ||||||| ||| | ||| |||||||||||||| ||||||
Sbjct: 2321 ggcagccatgttaggacgacagggctcctgacaatgtggacgccgtcgctccaggacagg 2262

                                                                        
Query: 304  gcaccgtactccggtgttttctgagcggccttggtcctcaccgtaaccttgtaggcgagc 363
            || ||| |||||||||  ||||| |||||||||||  |||| |||||||| |||   |||
Sbjct: 2261 gctccgaactccggtgccttctgggcggccttggttgtcactgtaaccttatagctaagc 2202

                                                                        
Query: 364  ttctggtttgtgctgctgaagtgcagggtgctcggctcgaccacgacgtcggcgcctttg 423
            ||||||||||||||   ||||||||||||| |||| ||||| | ||| |||||||| |||
Sbjct: 2201 ttctggtttgtgcttacgaagtgcagggtgttcggttcgacgatgacatcggcgcccttg 2142

                   
Query: 424  aacttgg 430
            |||||||
Sbjct: 2141 aacttgg 2135
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  133 bits (67), Expect = 5e-28
 Identities = 157/187 (83%)
 Strand = Plus / Plus

                                                                            
Query: 244      ggcagccatgtgaggaccagggggctccggactacgtgaacgccgtcgctccatgacagg 303
                ||||||||||| ||||| |  ||||||| ||| | ||| |||||||||||||| ||||||
Sbjct: 28852262 ggcagccatgttaggacgacagggctcctgacaatgtggacgccgtcgctccaggacagg 28852321

                                                                            
Query: 304      gcaccgtactccggtgttttctgagcggccttggtcctcaccgtaaccttgtaggcgagc 363
                || ||| |||||||||  ||||| |||||||||||  |||| |||||||| |||   |||
Sbjct: 28852322 gctccgaactccggtgccttctgggcggccttggttgtcactgtaaccttatagctaagc 28852381

                                                                            
Query: 364      ttctggtttgtgctgctgaagtgcagggtgctcggctcgaccacgacgtcggcgcctttg 423
                ||||||||||||||   ||||||||||||| |||| ||||| | ||| |||||||| |||
Sbjct: 28852382 ttctggtttgtgcttacgaagtgcagggtgttcggttcgacgatgacatcggcgcccttg 28852441

                       
Query: 424      aacttgg 430
                |||||||
Sbjct: 28852442 aacttgg 28852448



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 63/69 (91%), Gaps = 1/69 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1        agaaacaatcaaccatttactgaacatttggaataagcatgaatacatttgaggaataaa 60
                |||||||||||||||  ||||||||| |||||||||||||| |||||  |||||||||||
Sbjct: 28852048 agaaacaatcaaccaactactgaacaattggaataagcatggataca-gtgaggaataaa 28852106

                         
Query: 61       gcttgtttt 69
                |||||||||
Sbjct: 28852107 gcttgtttt 28852115
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>dbj|AK110251.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-H04, full
            insert sequence
          Length = 3493

 Score =  133 bits (67), Expect = 5e-28
 Identities = 157/187 (83%)
 Strand = Plus / Plus

                                                                        
Query: 244  ggcagccatgtgaggaccagggggctccggactacgtgaacgccgtcgctccatgacagg 303
            ||||||||||| ||||| |  ||||||| ||| | ||| |||||||||||||| ||||||
Sbjct: 905  ggcagccatgttaggacgacagggctcctgacaatgtggacgccgtcgctccaggacagg 964

                                                                        
Query: 304  gcaccgtactccggtgttttctgagcggccttggtcctcaccgtaaccttgtaggcgagc 363
            || ||| |||||||||  ||||| |||||||||||  |||| |||||||| |||   |||
Sbjct: 965  gctccgaactccggtgccttctgggcggccttggttgtcactgtaaccttatagctaagc 1024

                                                                        
Query: 364  ttctggtttgtgctgctgaagtgcagggtgctcggctcgaccacgacgtcggcgcctttg 423
            ||||||||||||||   ||||||||||||| |||| ||||| | ||| |||||||| |||
Sbjct: 1025 ttctggtttgtgcttacgaagtgcagggtgttcggttcgacgatgacatcggcgcccttg 1084

                   
Query: 424  aacttgg 430
            |||||||
Sbjct: 1085 aacttgg 1091



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 63/69 (91%), Gaps = 1/69 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaaacaatcaaccatttactgaacatttggaataagcatgaatacatttgaggaataaa 60
           |||||||||||||||  ||||||||| |||||||||||||| |||||  |||||||||||
Sbjct: 691 agaaacaatcaaccaactactgaacaattggaataagcatggataca-gtgaggaataaa 749

                    
Query: 61  gcttgtttt 69
           |||||||||
Sbjct: 750 gcttgtttt 758
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>dbj|AK110034.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-B01, full
           insert sequence
          Length = 3486

 Score =  133 bits (67), Expect = 5e-28
 Identities = 157/187 (83%)
 Strand = Plus / Plus

                                                                       
Query: 244 ggcagccatgtgaggaccagggggctccggactacgtgaacgccgtcgctccatgacagg 303
           ||||||||||| ||||| |  ||||||| ||| | ||| |||||||||||||| ||||||
Sbjct: 162 ggcagccatgttaggacgacagggctcctgacaatgtggacgccgtcgctccaggacagg 221

                                                                       
Query: 304 gcaccgtactccggtgttttctgagcggccttggtcctcaccgtaaccttgtaggcgagc 363
           || ||| |||||||||  ||||| |||||||||||  |||| |||||||| |||   |||
Sbjct: 222 gctccgaactccggtgccttctgggcggccttggttgtcactgtaaccttatagctaagc 281

                                                                       
Query: 364 ttctggtttgtgctgctgaagtgcagggtgctcggctcgaccacgacgtcggcgcctttg 423
           ||||||||||||||   ||||||||||||| |||| ||||| | ||| |||||||| |||
Sbjct: 282 ttctggtttgtgcttacgaagtgcagggtgttcggttcgacgatgacatcggcgcccttg 341

                  
Query: 424 aacttgg 430
           |||||||
Sbjct: 342 aacttgg 348
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>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04,
             complete sequence
          Length = 154865

 Score =  133 bits (67), Expect = 5e-28
 Identities = 157/187 (83%)
 Strand = Plus / Plus

                                                                         
Query: 244   ggcagccatgtgaggaccagggggctccggactacgtgaacgccgtcgctccatgacagg 303
             ||||||||||| ||||| |  ||||||| ||| | ||| |||||||||||||| ||||||
Sbjct: 64324 ggcagccatgttaggacgacagggctcctgacaatgtggacgccgtcgctccaggacagg 64383

                                                                         
Query: 304   gcaccgtactccggtgttttctgagcggccttggtcctcaccgtaaccttgtaggcgagc 363
             || ||| |||||||||  ||||| |||||||||||  |||| |||||||| |||   |||
Sbjct: 64384 gctccgaactccggtgccttctgggcggccttggttgtcactgtaaccttatagctaagc 64443

                                                                         
Query: 364   ttctggtttgtgctgctgaagtgcagggtgctcggctcgaccacgacgtcggcgcctttg 423
             ||||||||||||||   ||||||||||||| |||| ||||| | ||| |||||||| |||
Sbjct: 64444 ttctggtttgtgcttacgaagtgcagggtgttcggttcgacgatgacatcggcgcccttg 64503

                    
Query: 424   aacttgg 430
             |||||||
Sbjct: 64504 aacttgg 64510



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 63/69 (91%), Gaps = 1/69 (1%)
 Strand = Plus / Plus

                                                                         
Query: 1     agaaacaatcaaccatttactgaacatttggaataagcatgaatacatttgaggaataaa 60
             |||||||||||||||  ||||||||| |||||||||||||| |||||  |||||||||||
Sbjct: 64110 agaaacaatcaaccaactactgaacaattggaataagcatggataca-gtgaggaataaa 64168

                      
Query: 61    gcttgtttt 69
             |||||||||
Sbjct: 64169 gcttgtttt 64177
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>dbj|AK120348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064M11, full
            insert sequence
          Length = 1146

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 63/69 (91%), Gaps = 1/69 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    agaaacaatcaaccatttactgaacatttggaataagcatgaatacatttgaggaataaa 60
            |||||||||||||||  ||||||||| |||||||||||||| |||||  |||||||||||
Sbjct: 1072 agaaacaatcaaccaactactgaacaattggaataagcatggataca-gtgaggaataaa 1130

                     
Query: 61   gcttgtttt 69
            |||||||||
Sbjct: 1131 gcttgtttt 1139
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>dbj|AK065277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L14, full
            insert sequence
          Length = 1067

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 63/69 (91%), Gaps = 1/69 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    agaaacaatcaaccatttactgaacatttggaataagcatgaatacatttgaggaataaa 60
            |||||||||||||||  ||||||||| |||||||||||||| |||||  |||||||||||
Sbjct: 993  agaaacaatcaaccaactactgaacaattggaataagcatggataca-gtgaggaataaa 1051

                     
Query: 61   gcttgtttt 69
            |||||||||
Sbjct: 1052 gcttgtttt 1060
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>gb|AC087384.13| Homo sapiens chromosome 8, clone RP11-689G24, complete sequence
          Length = 110281

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 107   ctactcctgtgctgctggctgc 128
             ||||||||||||||||||||||
Sbjct: 56661 ctactcctgtgctgctggctgc 56682
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>gb|AC133883.6| Homo sapiens chromosome 8, clone RP11-945N8, complete sequence
          Length = 46394

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 107  ctactcctgtgctgctggctgc 128
            ||||||||||||||||||||||
Sbjct: 8329 ctactcctgtgctgctggctgc 8308
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>emb|AL139320.18| Human DNA sequence from clone RP11-154C3 on chromosome 13 Contains a
             cytochrome c oxidase subunit IV pseudogene, a novel gene,
             an aldo-keto reductase family 1, member B10 (aldose
             reductase) (AKR1B10) pseudogene, a novel gene, similar to
             RIKEN cDNA 1700086N05 and CpG island, complete sequence
          Length = 112107

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 188   accctctgactaatgcagagc 208
             |||||||||||||||||||||
Sbjct: 10016 accctctgactaatgcagagc 9996
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>gb|AC116309.2| Homo sapiens chromosome 5 clone RP11-106J9, complete sequence
          Length = 176112

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 36    agcatgaatacatttgaggaataaa 60
             ||||||||||||| |||||||||||
Sbjct: 75413 agcatgaatacatctgaggaataaa 75437
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>gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, complete sequence
          Length = 190298

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    ggcagccatgtgaggaccag 263
              ||||||||||||||||||||
Sbjct: 115357 ggcagccatgtgaggaccag 115376
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>gb|AC161528.14| Mus musculus chromosome 8, clone RP23-369H18, complete sequence
          Length = 206302

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 244    ggcagccatgtgaggaccag 263
              ||||||||||||||||||||
Sbjct: 169881 ggcagccatgtgaggaccag 169862
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>ref|NM_186991.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 309

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 400 tcgaccacgacgtcggcgcc 419
           ||||||||||||||||||||
Sbjct: 242 tcgaccacgacgtcggcgcc 223
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>gb|AY273289.1| Uncultured sulfate-reducing bacterium clone LFdsrC25 dissimilatory
           sulfite reductase alpha subunit gene, partial cds
          Length = 244

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 93  ccttccggcaagtgctactc 112
           ||||||||||||||||||||
Sbjct: 127 ccttccggcaagtgctactc 146
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>gb|AY273265.1| Uncultured sulfate-reducing bacterium clone LFdsrC1 dissimilatory
           sulfite reductase alpha subunit gene, partial cds
          Length = 244

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 93  ccttccggcaagtgctactc 112
           ||||||||||||||||||||
Sbjct: 127 ccttccggcaagtgctactc 146
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>ref|XM_414901.1| PREDICTED: Gallus gallus similar to ATP-binding cassette, sub-family
            C, member 6; anthracycline resistance-associated
            (LOC416600), mRNA
          Length = 2737

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 162  aagggcacagctgcttctgtcccc 185
            |||||||||||||||| |||||||
Sbjct: 1471 aagggcacagctgcttatgtcccc 1494
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 399    ctcgaccacgacgtcggcgc 418
              ||||||||||||||||||||
Sbjct: 869134 ctcgaccacgacgtcggcgc 869153
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>gb|BT009533.1| Triticum aestivum clone wr1.pk0133.f5:fis, full insert mRNA
           sequence
          Length = 1820

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 79  cttgacaacattttccttcc 98
           ||||||||||||||||||||
Sbjct: 263 cttgacaacattttccttcc 282
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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 307     ccgtactccggtgttttctg 326
               ||||||||||||||||||||
Sbjct: 1263449 ccgtactccggtgttttctg 1263468
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>gb|DQ301630.1| Thanatephorus cucumeris strain TO4 ATP synthase subunit 6-like
           (ATP6) gene, partial sequence; mitochondrial
          Length = 664

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  tactgaacatttggaataag 37
           ||||||||||||||||||||
Sbjct: 114 tactgaacatttggaataag 133
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>gb|DQ301629.1| Thanatephorus cucumeris strain TO1 ATP synthase subunit 6-like
           (ATP6) gene, partial sequence; mitochondrial
          Length = 723

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  tactgaacatttggaataag 37
           ||||||||||||||||||||
Sbjct: 115 tactgaacatttggaataag 134
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>gb|DQ301628.1| Thanatephorus cucumeris strain SJ57 ATP synthase subunit 6-like
           (ATP6) gene, partial sequence; mitochondrial
          Length = 707

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  tactgaacatttggaataag 37
           ||||||||||||||||||||
Sbjct: 123 tactgaacatttggaataag 142
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>gb|DQ301627.1| Thanatephorus cucumeris strain SJ34 ATP synthase subunit 6-like
           (ATP6) gene, partial sequence; mitochondrial
          Length = 433

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  tactgaacatttggaataag 37
           ||||||||||||||||||||
Sbjct: 100 tactgaacatttggaataag 119
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>gb|DQ301624.1| Thanatephorus cucumeris strain SJ02 ATP synthase subunit 6-like
           (ATP6) gene, partial sequence; mitochondrial
          Length = 708

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  tactgaacatttggaataag 37
           ||||||||||||||||||||
Sbjct: 105 tactgaacatttggaataag 124
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>gb|DQ301620.1| Thanatephorus cucumeris strain CBS 346.84 ATP synthase subunit
           6-like (ATP6) gene, partial sequence; mitochondrial
          Length = 554

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  tactgaacatttggaataag 37
           ||||||||||||||||||||
Sbjct: 92  tactgaacatttggaataag 111
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>gb|DQ301604.1| Thanatephorus cucumeris strain AG-4HGI ATP synthase subunit 6
           (ATP6) gene, partial cds; mitochondrial
          Length = 651

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  tactgaacatttggaataag 37
           ||||||||||||||||||||
Sbjct: 109 tactgaacatttggaataag 128
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>gb|DQ301598.1| Thanatephorus cucumeris strain AG-1-IA ATP synthase subunit 6
           (ATP6) gene, partial cds; mitochondrial
          Length = 421

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  tactgaacatttggaataag 37
           ||||||||||||||||||||
Sbjct: 100 tactgaacatttggaataag 119
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>gb|DQ301596.1| Ceratobasidium sp. CBS 700.82 ATP synthase subunit 6-like (ATP6)
           gene, partial sequence; mitochondrial
          Length = 679

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 18  tactgaacatttggaataag 37
           ||||||||||||||||||||
Sbjct: 572 tactgaacatttggaataag 553
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>gb|DQ301588.1| Ceratobasidium sp. CBS 346.84 ATP synthase subunit 6-like (ATP6)
           gene, partial sequence; mitochondrial
          Length = 676

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  tactgaacatttggaataag 37
           ||||||||||||||||||||
Sbjct: 109 tactgaacatttggaataag 128
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>gb|DQ056142.1| Coprinellus disseminatus strain C345.1 putative GTPase (RAB7.1),
             putative GTPase (RAB7.2), conserved hypothetical protein
             (UP14), putative sterol dehydrogenase (ERG26), putative
             transmembrane pheromone receptor (STE3.1), putative
             peptide pheromone (PHB1), peroxidase (PERO), conserved
             hypothetical protein (UP15), putative retroelement
             proteins, putative peptide pheromone (PHB2.1), putative
             transmembrane pheromone receptor (STE3.3), and putative
             peptide pheromone (PHB2.2) genes, complete cds
          Length = 41867

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   ttctggtttgtgctgctgaa 383
             ||||||||||||||||||||
Sbjct: 35287 ttctggtttgtgctgctgaa 35268
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 400      tcgaccacgacgtcggcgcc 419
                ||||||||||||||||||||
Sbjct: 23659723 tcgaccacgacgtcggcgcc 23659742
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>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1060_D03
          Length = 102178

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 400  tcgaccacgacgtcggcgcc 419
            ||||||||||||||||||||
Sbjct: 4337 tcgaccacgacgtcggcgcc 4356
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>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1127_E01
          Length = 123787

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 400    tcgaccacgacgtcggcgcc 419
              ||||||||||||||||||||
Sbjct: 112164 tcgaccacgacgtcggcgcc 112183
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>gb|AF111170.3|AF111170 Homo sapiens 14q32 Jagged2 gene, complete cds; and unknown gene
          Length = 148083

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 241    ggcggcagccatgtgaggac 260
              ||||||||||||||||||||
Sbjct: 118371 ggcggcagccatgtgaggac 118390
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>emb|AL512355.6|CNS07EF4 Human chromosome 14 DNA sequence BAC R-1087P8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 198273

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   ggcggcagccatgtgaggac 260
             ||||||||||||||||||||
Sbjct: 14808 ggcggcagccatgtgaggac 14789
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>emb|AL512356.6|CNS07EF5 Human chromosome 14 DNA sequence BAC R-44N21 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158467

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 241    ggcggcagccatgtgaggac 260
              ||||||||||||||||||||
Sbjct: 140110 ggcggcagccatgtgaggac 140091


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,540,464
Number of Sequences: 3902068
Number of extensions: 3540464
Number of successful extensions: 69448
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69319
Number of HSP's gapped (non-prelim): 123
length of query: 430
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 408
effective length of database: 17,147,199,772
effective search space: 6996057506976
effective search space used: 6996057506976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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