ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast38h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT017223.1| Zea mays clone EL01N0373E03.c mRNA sequence 153 5e-34
2gb|BT017170.1| Zea mays clone EL01N0369A02.c mRNA sequence 153 5e-34
3gb|AY111772.1| Zea mays CL14463_1 mRNA sequence 153 5e-34
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 143 4e-31
5dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic D... 143 4e-31
6dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic D... 143 4e-31
7dbj|AK060655.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 4e-31
8ref|NM_190525.1| Oryza sativa (japonica cultivar-group), predic... 141 2e-30
9gb|DQ277013.1| Ficus awkeotsang thaumatin-like protein isoform 3... 50 0.005
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.019
11dbj|AK068276.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.019
12gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.019
13emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa... 48 0.019
14gb|BT017651.1| Zea mays clone EL01N0439G03.c mRNA sequence 46 0.075
15gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence 46 0.075
16gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 46 0.075
17emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,... 46 0.075
18ref|NM_128438.2| Arabidopsis thaliana unknown protein AT2G28790 ... 44 0.30
19gb|AF355805.1| Brassica oleracea thaumatin-like cytokinin-bindin... 44 0.30
20gb|AF355806.2| Arabidopsis thaliana thaumatin-like cytokinin bin... 44 0.30
21gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map... 44 0.30
22gb|BT006222.1| Arabidopsis thaliana At2g28790 gene, complete cds 44 0.30
23emb|BX821333.1|CNS0AAAZ Arabidopsis thaliana Full-length cDNA Co... 44 0.30
24emb|BX821067.1|CNS0AAAS Arabidopsis thaliana Full-length cDNA Co... 44 0.30
25emb|BX819115.1|CNS0AADT Arabidopsis thaliana Full-length cDNA Co... 44 0.30
26emb|BX821442.1|CNS0AA2V Arabidopsis thaliana Full-length cDNA Co... 44 0.30
27gb|AY086000.1| Arabidopsis thaliana clone 2058 mRNA, complete se... 44 0.30
28dbj|AK118499.1| Arabidopsis thaliana At2g28790 mRNA for putative... 44 0.30
29ref|NM_191419.1| Oryza sativa (japonica cultivar-group), predic... 42 1.2
30gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome 42 1.2
31gb|AC104461.2| Homo sapiens chromosome 1 clone RP11-469A15, comp... 42 1.2
32dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
33dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
34dbj|AP005156.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
35dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
36dbj|AK069298.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
37dbj|AK060647.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
38gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 1.2
39emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.2
40ref|XM_471469.1| Oryza sativa (japonica cultivar-group), predic... 40 4.7
41gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.7
42gb|AC132352.3| Mus musculus BAC clone RP24-97D9 from chromosome ... 40 4.7
43gb|AC107456.9| Mus musculus chromosome 3, clone RP23-273L6, comp... 40 4.7
44gb|AC102693.9| Mus musculus chromosome 6, clone RP24-127M20, com... 40 4.7
45gb|AC102637.7| Mus musculus chromosome 6, clone RP23-216B9, comp... 40 4.7
46gb|AY316227.1| Mus musculus natural killer cell receptor protein... 40 4.7
47emb|BX537310.7| Zebrafish DNA sequence from clone CH211-138N17 i... 40 4.7
48gb|AY007206.1| Mus musculus type II lectin-like protein NKR-P1C ... 40 4.7
49gb|AF285840.1|AF285839S2 Mus musculus NKR-P1A (NKR-P1A) gene, ex... 40 4.7
50dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
51dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
52dbj|AK111277.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.7
53gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.7
54emb|AL731637.2|OSJN00278 Oryza sativa genomic DNA, chromosome 4,... 40 4.7
55emb|AL935053.6| Zebrafish DNA sequence from clone CH211-162M14, ... 40 4.7
56emb|AL731703.16| Mouse DNA sequence from clone RP23-100O16 on ch... 40 4.7
57gb|AC073857.30| Homo sapiens 12 BAC RP11-546D6 (Roswell Park Can... 40 4.7 
>gb|BT017223.1| Zea mays clone EL01N0373E03.c mRNA sequence
          Length = 1010

 Score =  153 bits (77), Expect = 5e-34
 Identities = 80/81 (98%)
 Strand = Plus / Minus

                                                                       
Query: 271 ctctagtggcagaagatgaccttgagctcgcgcggcgcggagcactcgtgggtgagcgag 330
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 700 ctctagtggcagaagatgaccttgagctcgcgcggcgcggcgcactcgtgggtgagcgag 641

                                
Query: 331 gggctgtcgtgcgcgtaggtg 351
           |||||||||||||||||||||
Sbjct: 640 gggctgtcgtgcgcgtaggtg 620
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>gb|BT017170.1| Zea mays clone EL01N0369A02.c mRNA sequence
          Length = 1122

 Score =  153 bits (77), Expect = 5e-34
 Identities = 80/81 (98%)
 Strand = Plus / Minus

                                                                       
Query: 271 ctctagtggcagaagatgaccttgagctcgcgcggcgcggagcactcgtgggtgagcgag 330
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 821 ctctagtggcagaagatgaccttgagctcgcgcggcgcggcgcactcgtgggtgagcgag 762

                                
Query: 331 gggctgtcgtgcgcgtaggtg 351
           |||||||||||||||||||||
Sbjct: 761 gggctgtcgtgcgcgtaggtg 741
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>gb|AY111772.1| Zea mays CL14463_1 mRNA sequence
          Length = 555

 Score =  153 bits (77), Expect = 5e-34
 Identities = 80/81 (98%)
 Strand = Plus / Plus

                                                                       
Query: 271 ctctagtggcagaagatgaccttgagctcgcgcggcgcggagcactcgtgggtgagcgag 330
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 257 ctctagtggcagaagatgaccttgagctcgcgcggcgcggcgcactcgtgggtgagcgag 316

                                
Query: 331 gggctgtcgtgcgcgtaggtg 351
           |||||||||||||||||||||
Sbjct: 317 gggctgtcgtgcgcgtaggtg 337
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  143 bits (72), Expect = 4e-31
 Identities = 78/80 (97%)
 Strand = Plus / Plus

                                                                            
Query: 272      tctagtggcagaagatgaccttgagctcgcgcggcgcggagcactcgtgggtgagcgagg 331
                ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 36023352 tctagtggcagaagatgaccttgagctcgcgcggcgcggcgcactcgtgggtgagcgacg 36023411

                                    
Query: 332      ggctgtcgtgcgcgtaggtg 351
                ||||||||||||||||||||
Sbjct: 36023412 ggctgtcgtgcgcgtaggtg 36023431



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 222      gacgggcggcggcggcgcacg 242
                |||||||||||||||||||||
Sbjct: 32528864 gacgggcggcggcggcgcacg 32528884
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>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0408C03
          Length = 141273

 Score =  143 bits (72), Expect = 4e-31
 Identities = 78/80 (97%)
 Strand = Plus / Plus

                                                                         
Query: 272   tctagtggcagaagatgaccttgagctcgcgcggcgcggagcactcgtgggtgagcgagg 331
             ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 36077 tctagtggcagaagatgaccttgagctcgcgcggcgcggcgcactcgtgggtgagcgacg 36136

                                 
Query: 332   ggctgtcgtgcgcgtaggtg 351
             ||||||||||||||||||||
Sbjct: 36137 ggctgtcgtgcgcgtaggtg 36156
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>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0031D11
          Length = 138108

 Score =  143 bits (72), Expect = 4e-31
 Identities = 78/80 (97%)
 Strand = Plus / Plus

                                                                          
Query: 272    tctagtggcagaagatgaccttgagctcgcgcggcgcggagcactcgtgggtgagcgagg 331
              ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 122030 tctagtggcagaagatgaccttgagctcgcgcggcgcggcgcactcgtgggtgagcgacg 122089

                                  
Query: 332    ggctgtcgtgcgcgtaggtg 351
              ||||||||||||||||||||
Sbjct: 122090 ggctgtcgtgcgcgtaggtg 122109
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>dbj|AK060655.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-A02, full
           insert sequence
          Length = 1001

 Score =  143 bits (72), Expect = 4e-31
 Identities = 78/80 (97%)
 Strand = Plus / Minus

                                                                       
Query: 272 tctagtggcagaagatgaccttgagctcgcgcggcgcggagcactcgtgggtgagcgagg 331
           ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 803 tctagtggcagaagatgaccttgagctcgcgcggcgcggcgcactcgtgggtgagcgacg 744

                               
Query: 332 ggctgtcgtgcgcgtaggtg 351
           ||||||||||||||||||||
Sbjct: 743 ggctgtcgtgcgcgtaggtg 724
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>ref|NM_190525.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 744

 Score =  141 bits (71), Expect = 2e-30
 Identities = 77/79 (97%)
 Strand = Plus / Minus

                                                                       
Query: 273 ctagtggcagaagatgaccttgagctcgcgcggcgcggagcactcgtgggtgagcgaggg 332
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 744 ctagtggcagaagatgaccttgagctcgcgcggcgcggcgcactcgtgggtgagcgacgg 685

                              
Query: 333 gctgtcgtgcgcgtaggtg 351
           |||||||||||||||||||
Sbjct: 684 gctgtcgtgcgcgtaggtg 666
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>gb|DQ277013.1| Ficus awkeotsang thaumatin-like protein isoform 3 mRNA, complete
           cds
          Length = 842

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 275 agtggcagaagatgaccttgagctc 299
           |||||||||||||||||||||||||
Sbjct: 766 agtggcagaagatgaccttgagctc 742
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 278      ggcagaagatgaccttgagctcgc 301
                ||||||||||||||||||||||||
Sbjct: 23444348 ggcagaagatgaccttgagctcgc 23444325



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 277      tggcagaagatgaccttgagctcgc 301
                |||||||||| ||||||||||||||
Sbjct: 23462063 tggcagaagacgaccttgagctcgc 23462039



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                            
Query: 224     cgggcggcggcggcgcacgtccaccggct 252
               ||||||||||||||| |||||||||||||
Sbjct: 2705546 cgggcggcggcggcg-acgtccaccggct 2705573
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>dbj|AK068276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136G04, full
           insert sequence
          Length = 1027

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 278 ggcagaagatgaccttgagctcgc 301
           ||||||||||||||||||||||||
Sbjct: 655 ggcagaagatgaccttgagctcgc 632
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 278      ggcagaagatgaccttgagctcgc 301
                ||||||||||||||||||||||||
Sbjct: 23372539 ggcagaagatgaccttgagctcgc 23372516



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 277      tggcagaagatgaccttgagctcgc 301
                |||||||||| ||||||||||||||
Sbjct: 23390254 tggcagaagacgaccttgagctcgc 23390230



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                            
Query: 224     cgggcggcggcggcgcacgtccaccggct 252
               ||||||||||||||| |||||||||||||
Sbjct: 2705490 cgggcggcggcggcg-acgtccaccggct 2705517
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>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 162261

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 278   ggcagaagatgaccttgagctcgc 301
             ||||||||||||||||||||||||
Sbjct: 57811 ggcagaagatgaccttgagctcgc 57834



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 277   tggcagaagatgaccttgagctcgc 301
             |||||||||| ||||||||||||||
Sbjct: 40096 tggcagaagacgaccttgagctcgc 40120
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>gb|BT017651.1| Zea mays clone EL01N0439G03.c mRNA sequence
          Length = 1007

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 277 tggcagaagatgaccttgagctc 299
           |||||||||||||||||||||||
Sbjct: 778 tggcagaagatgaccttgagctc 756
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>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 245    caccggctcgagcgccggtggagtcac 271
              ||||||||||||||||||||| |||||
Sbjct: 583488 caccggctcgagcgccggtggcgtcac 583462
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>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 245    caccggctcgagcgccggtggagtcac 271
              ||||||||||||||||||||| |||||
Sbjct: 604991 caccggctcgagcgccggtggcgtcac 604965
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>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence,
              strain 2308
          Length = 2121359

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 245    caccggctcgagcgccggtggagtcac 271
              ||||||||||||||||||||| |||||
Sbjct: 601288 caccggctcgagcgccggtggcgtcac 601262
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>ref|NM_128438.2| Arabidopsis thaliana unknown protein AT2G28790 mRNA, complete cds
          Length = 1002

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 274 tagtggcagaagatgaccttgagctc 299
           ||||||||||||||||| ||||||||
Sbjct: 767 tagtggcagaagatgactttgagctc 742
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>gb|AF355805.1| Brassica oleracea thaumatin-like cytokinin-binding protein (CBP1)
           mRNA, complete cds
          Length = 753

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 274 tagtggcagaagatgaccttgagctc 299
           ||||||||||||||||| ||||||||
Sbjct: 752 tagtggcagaagatgactttgagctc 727
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>gb|AF355806.2| Arabidopsis thaliana thaumatin-like cytokinin binding protein
           (CBP1) mRNA, complete cds
          Length = 750

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 274 tagtggcagaagatgaccttgagctc 299
           ||||||||||||||||| ||||||||
Sbjct: 749 tagtggcagaagatgactttgagctc 724
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>gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map mi54, complete
             sequence
          Length = 107097

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 274   tagtggcagaagatgaccttgagctc 299
             ||||||||||||||||| ||||||||
Sbjct: 25849 tagtggcagaagatgactttgagctc 25874
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>gb|BT006222.1| Arabidopsis thaliana At2g28790 gene, complete cds
          Length = 750

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 274 tagtggcagaagatgaccttgagctc 299
           ||||||||||||||||| ||||||||
Sbjct: 749 tagtggcagaagatgactttgagctc 724
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>emb|BX821333.1|CNS0AAAZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL34ZE09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 909

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 274 tagtggcagaagatgaccttgagctc 299
           ||||||||||||||||| ||||||||
Sbjct: 753 tagtggcagaagatgactttgagctc 728
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>emb|BX821067.1|CNS0AAAS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL10ZA08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 911

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 274 tagtggcagaagatgaccttgagctc 299
           ||||||||||||||||| ||||||||
Sbjct: 749 tagtggcagaagatgactttgagctc 724
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>emb|BX819115.1|CNS0AADT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB48ZB01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 916

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 274 tagtggcagaagatgaccttgagctc 299
           ||||||||||||||||| ||||||||
Sbjct: 754 tagtggcagaagatgactttgagctc 729
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>emb|BX821442.1|CNS0AA2V Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL42ZA01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 822

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 274 tagtggcagaagatgaccttgagctc 299
           ||||||||||||||||| ||||||||
Sbjct: 673 tagtggcagaagatgactttgagctc 648
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>gb|AY086000.1| Arabidopsis thaliana clone 2058 mRNA, complete sequence
          Length = 928

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 274 tagtggcagaagatgaccttgagctc 299
           ||||||||||||||||| ||||||||
Sbjct: 768 tagtggcagaagatgactttgagctc 743
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>dbj|AK118499.1| Arabidopsis thaliana At2g28790 mRNA for putative thaumatin,
           complete cds, clone: RAFL19-73-G08
          Length = 924

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 274 tagtggcagaagatgaccttgagctc 299
           ||||||||||||||||| ||||||||
Sbjct: 766 tagtggcagaagatgactttgagctc 741
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>ref|NM_191419.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 684

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 222 gacgggcggcggcggcgcacg 242
           |||||||||||||||||||||
Sbjct: 239 gacgggcggcggcggcgcacg 219
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>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 94      gccgaactactacatcaccaa 114
               |||||||||||||||||||||
Sbjct: 1961541 gccgaactactacatcaccaa 1961561
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>gb|AC104461.2| Homo sapiens chromosome 1 clone RP11-469A15, complete sequence
          Length = 165496

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 157    cacatgacagatgagtggaag 177
              |||||||||||||||||||||
Sbjct: 145923 cacatgacagatgagtggaag 145903
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 221      tgacgggcggcggcggcgcac 241
                |||||||||||||||||||||
Sbjct: 21509115 tgacgggcggcggcggcgcac 21509095
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>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0665A11
          Length = 166421

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 222    gacgggcggcggcggcgcacg 242
              |||||||||||||||||||||
Sbjct: 116385 gacgggcggcggcggcgcacg 116405
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>dbj|AP005156.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1729_E01
          Length = 155527

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 221    tgacgggcggcggcggcgcac 241
              |||||||||||||||||||||
Sbjct: 153171 tgacgggcggcggcggcgcac 153151
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>dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1582_D10
          Length = 103475

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 221   tgacgggcggcggcggcgcac 241
             |||||||||||||||||||||
Sbjct: 46899 tgacgggcggcggcggcgcac 46879
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>dbj|AK069298.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015J20, full
           insert sequence
          Length = 1058

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 222 gacgggcggcggcggcgcacg 242
           |||||||||||||||||||||
Sbjct: 308 gacgggcggcggcggcgcacg 288
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>dbj|AK060647.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G07, full
           insert sequence
          Length = 944

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                        
Query: 224 cgggcggcggcggcgcacgtccaccggct 252
           ||||||||||||||| |||||||||||||
Sbjct: 254 cgggcggcggcggcg-acgtccaccggct 227
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 231    cggcggcgcacgtccaccggctcgagcgc 259
              |||||||||||||||||| ||||| ||||
Sbjct: 261499 cggcggcgcacgtccaccagctcgggcgc 261527
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>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151878

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                          
Query: 224   cgggcggcggcggcgcacgtccaccggct 252
             ||||||||||||||| |||||||||||||
Sbjct: 74472 cgggcggcggcggcg-acgtccaccggct 74499
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>ref|XM_471469.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 714

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 cggctcgagcgccggtggag 267
           ||||||||||||||||||||
Sbjct: 306 cggctcgagcgccggtggag 325
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>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16
              map C481S, complete sequence
          Length = 179668

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 278    ggcagaagatgaccttgagctcgc 301
              ||||||||| ||||||||||||||
Sbjct: 111261 ggcagaagacgaccttgagctcgc 111238
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>gb|AC132352.3| Mus musculus BAC clone RP24-97D9 from chromosome 6, complete sequence
          Length = 168117

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 276    gtggcagaagatgaccttgagctc 299
              ||||| ||||||||||||||||||
Sbjct: 108514 gtggctgaagatgaccttgagctc 108491
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>gb|AC107456.9| Mus musculus chromosome 3, clone RP23-273L6, complete sequence
          Length = 185661

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   gtggcagaagatgaccttga 295
             ||||||||||||||||||||
Sbjct: 36122 gtggcagaagatgaccttga 36103
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>gb|AC102693.9| Mus musculus chromosome 6, clone RP24-127M20, complete sequence
          Length = 191955

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 276    gtggcagaagatgaccttgagctc 299
              ||||| ||||||||||||||||||
Sbjct: 114269 gtggctgaagatgaccttgagctc 114246
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>gb|AC102637.7| Mus musculus chromosome 6, clone RP23-216B9, complete sequence
          Length = 196356

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 276    gtggcagaagatgaccttgagctc 299
              ||||| ||||||||||||||||||
Sbjct: 172863 gtggctgaagatgaccttgagctc 172886
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>gb|AY316227.1| Mus musculus natural killer cell receptor protein NKR-P1C (Klrb1c)
             gene, exons 1, 1.1, 2, 2.1 and partial cds
          Length = 12698

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 276   gtggcagaagatgaccttgagctc 299
             ||||| ||||||||||||||||||
Sbjct: 11210 gtggctgaagatgaccttgagctc 11187
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>emb|BX537310.7| Zebrafish DNA sequence from clone CH211-138N17 in linkage group 3,
             complete sequence
          Length = 163184

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    acatgtatgttatttcagag 56
             ||||||||||||||||||||
Sbjct: 80422 acatgtatgttatttcagag 80403
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>gb|AY007206.1| Mus musculus type II lectin-like protein NKR-P1C (Nkrp1c) gene,
            complete cds
          Length = 16561

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 276  gtggcagaagatgaccttgagctc 299
            ||||| ||||||||||||||||||
Sbjct: 5941 gtggctgaagatgaccttgagctc 5918
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>gb|AF285840.1|AF285839S2 Mus musculus NKR-P1A (NKR-P1A) gene, exons 2 through 6, and
           complete cds
          Length = 24584

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 276 gtggcagaagatgaccttgagctc 299
           ||||| ||||||||||||||||||
Sbjct: 695 gtggctgaagatgaccttgagctc 672
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 248      cggctcgagcgccggtggag 267
                ||||||||||||||||||||
Sbjct: 11183344 cggctcgagcgccggtggag 11183363
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 278      ggcagaagatgaccttgagctcgc 301
                ||||||||| ||||||||||||||
Sbjct: 28152706 ggcagaagacgaccttgagctcgc 28152683
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>dbj|AK111277.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-G09, full
           insert sequence
          Length = 941

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 cggctcgagcgccggtggag 267
           ||||||||||||||||||||
Sbjct: 329 cggctcgagcgccggtggag 348
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 278      ggcagaagatgaccttgagctcgc 301
                ||||||||| ||||||||||||||
Sbjct: 28137584 ggcagaagacgaccttgagctcgc 28137561
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>emb|AL731637.2|OSJN00278 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0115I09,
             complete sequence
          Length = 141580

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   cggctcgagcgccggtggag 267
             ||||||||||||||||||||
Sbjct: 51968 cggctcgagcgccggtggag 51987
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>emb|AL935053.6| Zebrafish DNA sequence from clone CH211-162M14, complete sequence
          Length = 138341

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   agatgagtggaagtagatga 184
             ||||||||||||||||||||
Sbjct: 79776 agatgagtggaagtagatga 79757
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>emb|AL731703.16| Mouse DNA sequence from clone RP23-100O16 on chromosome 2, complete
             sequence
          Length = 187541

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   gtggcagaagatgaccttga 295
             ||||||||||||||||||||
Sbjct: 83104 gtggcagaagatgaccttga 83123
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>gb|AC073857.30| Homo sapiens 12 BAC RP11-546D6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 148811

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   cgggcggcggcggcgcacgt 243
             ||||||||||||||||||||
Sbjct: 86569 cgggcggcggcggcgcacgt 86550


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,764,744
Number of Sequences: 3902068
Number of extensions: 2764744
Number of successful extensions: 84698
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 83397
Number of HSP's gapped (non-prelim): 1347
length of query: 351
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 329
effective length of database: 17,147,199,772
effective search space: 5641428724988
effective search space used: 5641428724988
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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