| Clone Name | rbast38e09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_466518.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1739 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Minus Query: 29 tgagttcataaatcaatcatggaagcaatgaat 61 |||||||||| ||||||||||| |||||||||| Sbjct: 1728 tgagttcatatatcaatcatgggagcaatgaat 1696
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Plus Query: 29 tgagttcataaatcaatcatggaagcaatgaat 61 |||||||||| ||||||||||| |||||||||| Sbjct: 23089239 tgagttcatatatcaatcatgggagcaatgaat 23089271 Score = 44.1 bits (22), Expect = 0.099 Identities = 31/34 (91%) Strand = Plus / Plus Query: 25 tttctgagttcataaatcaatcatggaagcaatg 58 |||||||||||||| ||||| |||||||| |||| Sbjct: 23102738 tttctgagttcatatatcaaccatggaagtaatg 23102771 Score = 40.1 bits (20), Expect = 1.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 aagcacacacactgctaagctcct 105 |||||||||||||||| ||||||| Sbjct: 23102791 aagcacacacactgctgagctcct 23102814
>dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_D09 Length = 138615 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Plus Query: 29 tgagttcataaatcaatcatggaagcaatgaat 61 |||||||||| ||||||||||| |||||||||| Sbjct: 56277 tgagttcatatatcaatcatgggagcaatgaat 56309 Score = 44.1 bits (22), Expect = 0.099 Identities = 31/34 (91%) Strand = Plus / Plus Query: 25 tttctgagttcataaatcaatcatggaagcaatg 58 |||||||||||||| ||||| |||||||| |||| Sbjct: 69776 tttctgagttcatatatcaaccatggaagtaatg 69809 Score = 40.1 bits (20), Expect = 1.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 aagcacacacactgctaagctcct 105 |||||||||||||||| ||||||| Sbjct: 69829 aagcacacacactgctgagctcct 69852
>dbj|AK060490.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H10, full insert sequence Length = 1738 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Minus Query: 29 tgagttcataaatcaatcatggaagcaatgaat 61 |||||||||| ||||||||||| |||||||||| Sbjct: 1727 tgagttcatatatcaatcatgggagcaatgaat 1695
>ref|XM_466520.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2228 Score = 44.1 bits (22), Expect = 0.099 Identities = 31/34 (91%) Strand = Plus / Minus Query: 25 tttctgagttcataaatcaatcatggaagcaatg 58 |||||||||||||| ||||| |||||||| |||| Sbjct: 2134 tttctgagttcatatatcaaccatggaagtaatg 2101 Score = 40.1 bits (20), Expect = 1.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 aagcacacacactgctaagctcct 105 |||||||||||||||| ||||||| Sbjct: 2081 aagcacacacactgctgagctcct 2058
>emb|BX901957.4| Zebrafish DNA sequence from clone CH211-150G5 in linkage group 15, complete sequence Length = 175019 Score = 44.1 bits (22), Expect = 0.099 Identities = 28/30 (93%) Strand = Plus / Minus Query: 35 cataaatcaatcatggaagcaatgaatcaa 64 ||||||||||||| | |||||||||||||| Sbjct: 168202 cataaatcaatcaagaaagcaatgaatcaa 168173
>dbj|AK070690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058I02, full insert sequence Length = 2261 Score = 44.1 bits (22), Expect = 0.099 Identities = 31/34 (91%) Strand = Plus / Minus Query: 25 tttctgagttcataaatcaatcatggaagcaatg 58 |||||||||||||| ||||| |||||||| |||| Sbjct: 2167 tttctgagttcatatatcaaccatggaagtaatg 2134 Score = 40.1 bits (20), Expect = 1.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 aagcacacacactgctaagctcct 105 |||||||||||||||| ||||||| Sbjct: 2114 aagcacacacactgctgagctcct 2091
>dbj|AK065136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A04, full insert sequence Length = 3334 Score = 44.1 bits (22), Expect = 0.099 Identities = 31/34 (91%) Strand = Plus / Minus Query: 25 tttctgagttcataaatcaatcatggaagcaatg 58 |||||||||||||| ||||| |||||||| |||| Sbjct: 3095 tttctgagttcatatatcaaccatggaagtaatg 3062 Score = 40.1 bits (20), Expect = 1.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 aagcacacacactgctaagctcct 105 |||||||||||||||| ||||||| Sbjct: 3042 aagcacacacactgctgagctcct 3019
>ref|XM_632934.1| Dictyostelium discoideum hypothetical protein (DDB0186687), partial mRNA Length = 1467 Score = 42.1 bits (21), Expect = 0.39 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 caaataatctacaatatattt 26 ||||||||||||||||||||| Sbjct: 1307 caaataatctacaatatattt 1327
>gb|AC138615.3| Mus musculus BAC clone RP24-67A12 from chromosome 3, complete sequence Length = 150847 Score = 42.1 bits (21), Expect = 0.39 Identities = 24/25 (96%) Strand = Plus / Plus Query: 19 atatattttctgagttcataaatca 43 ||||||||| ||||||||||||||| Sbjct: 35368 atatattttatgagttcataaatca 35392
>gb|AC093435.3| Drosophila melanogaster 3L BAC RP98-7A5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 171689 Score = 42.1 bits (21), Expect = 0.39 Identities = 27/29 (93%) Strand = Plus / Minus Query: 13 tctacaatatattttctgagttcataaat 41 |||| ||||||||||||||||| |||||| Sbjct: 78985 tctataatatattttctgagttaataaat 78957
>ref|NM_079292.4| Drosophila melanogaster Calpain-B CG8107-RA (CalpB), mRNA Length = 4223 Score = 42.1 bits (21), Expect = 0.39 Identities = 27/29 (93%) Strand = Plus / Plus Query: 13 tctacaatatattttctgagttcataaat 41 |||| ||||||||||||||||| |||||| Sbjct: 123 tctataatatattttctgagttaataaat 151
>gb|AE003550.4| Drosophila melanogaster chromosome 3L, section 35 of 83 of the complete sequence Length = 304975 Score = 42.1 bits (21), Expect = 0.39 Identities = 27/29 (93%) Strand = Plus / Plus Query: 13 tctacaatatattttctgagttcataaat 41 |||| ||||||||||||||||| |||||| Sbjct: 126162 tctataatatattttctgagttaataaat 126190
>gb|AC135511.4| Mus musculus BAC clone RP23-255B19 from 3, complete sequence Length = 195384 Score = 42.1 bits (21), Expect = 0.39 Identities = 24/25 (96%) Strand = Plus / Minus Query: 19 atatattttctgagttcataaatca 43 ||||||||| ||||||||||||||| Sbjct: 1959 atatattttatgagttcataaatca 1935
>gb|AF062404.2| Drosophila melanogaster calpain mRNA, complete cds Length = 4227 Score = 42.1 bits (21), Expect = 0.39 Identities = 27/29 (93%) Strand = Plus / Plus Query: 13 tctacaatatattttctgagttcataaat 41 |||| ||||||||||||||||| |||||| Sbjct: 123 tctataatatattttctgagttaataaat 151
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tgctaagctcctttttaaaa 113 |||||||||||||||||||| Sbjct: 5994198 tgctaagctcctttttaaaa 5994179
>dbj|AP005442.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0073I05 Length = 182291 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tgctaagctcctttttaaaa 113 |||||||||||||||||||| Sbjct: 181308 tgctaagctcctttttaaaa 181289
>dbj|AP003858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_H11 Length = 122464 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tgctaagctcctttttaaaa 113 |||||||||||||||||||| Sbjct: 45010 tgctaagctcctttttaaaa 44991
>dbj|AP004157.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1114_D06 Length = 107621 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tgctaagctcctttttaaaa 113 |||||||||||||||||||| Sbjct: 87301 tgctaagctcctttttaaaa 87282
>dbj|AP001892.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-49M9, complete sequences Length = 144308 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 aatcaatcatggaagcaatg 58 |||||||||||||||||||| Sbjct: 10817 aatcaatcatggaagcaatg 10798
>dbj|AP000798.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-43E2, complete sequences Length = 113054 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 aatcaatcatggaagcaatg 58 |||||||||||||||||||| Sbjct: 57301 aatcaatcatggaagcaatg 57282
>ref|XM_637449.1| Dictyostelium discoideum hypothetical protein (DDB0203400), partial mRNA Length = 456 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 aataatctacaatatattt 26 ||||||||||||||||||| Sbjct: 118 aataatctacaatatattt 100
>gb|AC117247.4| Mus musculus BAC clone RP24-323L24 from chromosome 5, complete sequence Length = 162677 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 aaataatctacaatatatt 25 ||||||||||||||||||| Sbjct: 60599 aaataatctacaatatatt 60581
>gb|AY380826.1| Lymphocystis disease virus - isolate China, complete genome Length = 186250 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 104 ctttttaaaaactaaaaca 122 ||||||||||||||||||| Sbjct: 128015 ctttttaaaaactaaaaca 127997
>gb|AC140985.3| Mus musculus BAC clone RP23-60H23 from chromosome 13, complete sequence Length = 222741 Score = 38.2 bits (19), Expect = 6.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 5 acaaataatctacaatatatttt 27 ||||||||| ||||||||||||| Sbjct: 82036 acaaataatatacaatatatttt 82014
>gb|AC123741.9| Mus musculus chromosome 1, clone RP24-113A5, complete sequence Length = 188453 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 tatattttctgagttcata 38 ||||||||||||||||||| Sbjct: 5753 tatattttctgagttcata 5735
>gb|AC156556.8| Mus musculus chromosome 7, clone RP23-92E8, complete sequence Length = 250903 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 79 ggtaagcacacacactgct 97 ||||||||||||||||||| Sbjct: 113086 ggtaagcacacacactgct 113104
>gb|AC116922.2| Dictyostelium discoideum chromosome 2 map 6061442-6097630 strain AX4, complete sequence Length = 36188 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 aataatctacaatatattt 26 ||||||||||||||||||| Sbjct: 29437 aataatctacaatatattt 29455
>gb|AC121895.3| Mus musculus BAC clone RP24-157P5 from chromosome 2, complete sequence Length = 171557 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 tttttaaaaactaaaacaa 123 ||||||||||||||||||| Sbjct: 81965 tttttaaaaactaaaacaa 81983
>gb|AC007950.7| Homo sapiens chromosome 15, clone RP11-44M14, complete sequence Length = 170979 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 104 ctttttaaaaactaaaaca 122 ||||||||||||||||||| Sbjct: 119224 ctttttaaaaactaaaaca 119206
>gb|AC123807.4| Mus musculus BAC clone RP24-157J13 from chromosome 13, complete sequence Length = 187710 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 caaataatctacaatatat 24 ||||||||||||||||||| Sbjct: 166247 caaataatctacaatatat 166265
>gb|AY334017.1| Salmonella enterica serogroup O6,14 rfb gene cluster, complete sequence Length = 8478 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 caaataatctacaatatat 24 ||||||||||||||||||| Sbjct: 8374 caaataatctacaatatat 8356
>gb|AC087420.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-314O1, complete sequence Length = 232462 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 107 tttaaaaactaaaacaagc 125 ||||||||||||||||||| Sbjct: 47062 tttaaaaactaaaacaagc 47044
>emb|CR318653.8| Zebrafish DNA sequence from clone DKEY-19B23 in linkage group 7, complete sequence Length = 235090 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 agcacacacactgctaagc 101 ||||||||||||||||||| Sbjct: 134438 agcacacacactgctaagc 134456
>gb|AC107801.14| Mus musculus, clone RP23-29M6, complete sequence Length = 283075 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 ctcctttttaaaaactaaa 119 ||||||||||||||||||| Sbjct: 33929 ctcctttttaaaaactaaa 33911
>gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8 of 13 of the complete sequence Length = 249943 Score = 38.2 bits (19), Expect = 6.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 8 aataatctacaatatattttctg 30 |||||||||||||||||| |||| Sbjct: 180749 aataatctacaatatattgtctg 180771
>gb|AE014822.1| Plasmodium falciparum 3D7 chromosome 14 section 7 of 13 of the complete sequence Length = 253924 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 106 ttttaaaaactaaaacaag 124 ||||||||||||||||||| Sbjct: 171933 ttttaaaaactaaaacaag 171915
>emb|AL357673.12| Human DNA sequence from clone RP11-446E24 on chromosome 1 Contains a novel protein, two novel genes and the 5' end of the MRPL37 gene for mitochondrial ribosomal protein L37, complete sequence Length = 93717 Score = 38.2 bits (19), Expect = 6.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 85 cacacacactgctaagctccttt 107 ||||||||||||| ||||||||| Sbjct: 46019 cacacacactgctgagctccttt 46041
>emb|AL356217.30| Human DNA sequence from clone RP11-518D7 on chromosome 13 Contains a novel gene, complete sequence Length = 103060 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 9 ataatctacaatatatttt 27 ||||||||||||||||||| Sbjct: 88978 ataatctacaatatatttt 88960
>emb|AL157774.14| Human DNA sequence from clone RP11-442L12 on chromosome 6 Contains part of the PKHD1 gene for polycystic kidney and hepatic disease 1 (autosomal recessive) (TIG multiple domains-1, FCYT, ARPKD) and a CpG island, complete sequence Length = 154055 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 42 caatcatggaagcaatgaa 60 ||||||||||||||||||| Sbjct: 99157 caatcatggaagcaatgaa 99175
>emb|AL136095.25| Human DNA sequence from clone RP1-25L16 on chromosome 6, complete sequence Length = 50133 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 atctacaatatattttctg 30 ||||||||||||||||||| Sbjct: 16947 atctacaatatattttctg 16929
>emb|CR759918.11| Zebrafish DNA sequence from clone CH211-278M11 in linkage group 15, complete sequence Length = 160374 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 tttttaaaaactaaaacaa 123 ||||||||||||||||||| Sbjct: 89092 tttttaaaaactaaaacaa 89110
>gb|AC129351.6| Homo sapiens 12 BAC RP11-466G11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161618 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 acaatatattttctgagtt 34 ||||||||||||||||||| Sbjct: 85210 acaatatattttctgagtt 85228
>emb|BX883047.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 6/11 Length = 349571 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 102 tcctttttaaaaactaaaa 120 ||||||||||||||||||| Sbjct: 214877 tcctttttaaaaactaaaa 214895
>emb|AL928906.4| Zebrafish DNA sequence from clone RP71-34G2 in linkage group 7 Contains a novel gene, a novel gene similar to human and mouse ORCL6 (origin recognition complex, subunit 6 homolog-like (yeast)), a novel gene simlar to human and mouse VPS35 (vacuolar protein sorting 35 (yeast)), a novel gene similar to human HRH3 (histamine receptor H3), a novel gene similar to human and rat ARL5 (ADP-ribosylation factor-like 5) and a CpG island, complete sequence Length = 161527 Score = 38.2 bits (19), Expect = 6.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 11 aatctacaatatattttctgagt 33 |||||||||||||||| |||||| Sbjct: 53817 aatctacaatatatttgctgagt 53795
>emb|AL161472.2|ATCHRIV2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 2 Length = 197975 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 104 ctttttaaaaactaaaaca 122 ||||||||||||||||||| Sbjct: 111387 ctttttaaaaactaaaaca 111369
>gb|AY129465.1| Homo sapiens polycystic kidney and hepatic disease 1 (PKHD1) gene, complete cds, alternatively spliced Length = 469514 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 42 caatcatggaagcaatgaa 60 ||||||||||||||||||| Sbjct: 304643 caatcatggaagcaatgaa 304625
>gb|AC129675.6| Homo sapiens 12 BAC RP11-310A24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 112495 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 acaatatattttctgagtt 34 ||||||||||||||||||| Sbjct: 36163 acaatatattttctgagtt 36181
>emb|BX511009.6| Zebrafish DNA sequence from clone DKEYP-86F6 in linkage group 20 Contains the 5' end of a novel gene and a novel gene, complete sequence Length = 122167 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 16 acaatatattttctgagtt 34 ||||||||||||||||||| Sbjct: 27384 acaatatattttctgagtt 27366
>gb|AC092829.4| Homo sapiens 12 BAC RP11-165P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 116783 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 ctcctttttaaaaactaaa 119 ||||||||||||||||||| Sbjct: 50173 ctcctttttaaaaactaaa 50155
>gb|AC079070.6| Homo sapiens chromosome 18, clone RP11-126K15, complete sequence Length = 191464 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 attttctgagttcataaat 41 ||||||||||||||||||| Sbjct: 169127 attttctgagttcataaat 169109
>dbj|AK163595.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430112G08 product:unclassifiable, full insert sequence Length = 3281 Score = 38.2 bits (19), Expect = 6.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 5 acaaataatctacaatatatttt 27 |||||||||||| |||||||||| Sbjct: 1357 acaaataatctataatatatttt 1335
>dbj|AK156819.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830101O10 product:Rho GDP dissociation inhibitor (GDI) alpha, full insert sequence Length = 2395 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 ctttttaaaaactaaaaca 122 ||||||||||||||||||| Sbjct: 2298 ctttttaaaaactaaaaca 2316
>gb|AC090226.3| Homo sapiens chromosome 18, clone RP11-723D20, complete sequence Length = 173602 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 attttctgagttcataaat 41 ||||||||||||||||||| Sbjct: 49972 attttctgagttcataaat 49954
>emb|BX530089.9| Zebrafish DNA sequence from clone CH211-129M12 in linkage group 3, complete sequence Length = 176077 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 tgagttcataaatcaatca 47 ||||||||||||||||||| Sbjct: 71452 tgagttcataaatcaatca 71470
>gb|AC161267.2| Mus musculus BAC clone RP23-247F21 from chromosome 13, complete sequence Length = 176277 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 105 tttttaaaaactaaaacaa 123 ||||||||||||||||||| Sbjct: 120939 tttttaaaaactaaaacaa 120921
>emb|AL845281.5| Mouse DNA sequence from clone RP23-476B1 on chromosome 2, complete sequence Length = 195228 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 107 tttaaaaactaaaacaagc 125 ||||||||||||||||||| Sbjct: 168318 tttaaaaactaaaacaagc 168336
>gb|AC100787.17| Homo sapiens chromosome 17, clone CTD-2589J4, complete sequence Length = 233062 Score = 38.2 bits (19), Expect = 6.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 36 ataaatcaatcatggaagcaatg 58 |||||||| |||||||||||||| Sbjct: 37987 ataaatcactcatggaagcaatg 38009
>gb|AC102926.14| Mus musculus chromosome 3, clone RP24-237D17, complete sequence Length = 177195 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 aagctcctttttaaaaact 116 ||||||||||||||||||| Sbjct: 145323 aagctcctttttaaaaact 145305
>gb|AC129946.9| Mus musculus chromosome 5, clone RP24-512F21, complete sequence Length = 141041 Score = 38.2 bits (19), Expect = 6.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 102 tcctttttaaaaactaaaacaag 124 ||||||||||||| ||||||||| Sbjct: 30596 tcctttttaaaaaataaaacaag 30574
>gb|AC156569.3| Mus musculus BAC clone RP23-315K10 from chromosome 13, complete sequence Length = 165570 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 atatattttctgagttcat 37 ||||||||||||||||||| Sbjct: 59641 atatattttctgagttcat 59623
>gb|AC011933.17| Homo sapiens chromosome 17, clone RP11-16C1, complete sequence Length = 153211 Score = 38.2 bits (19), Expect = 6.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 36 ataaatcaatcatggaagcaatg 58 |||||||| |||||||||||||| Sbjct: 40070 ataaatcactcatggaagcaatg 40048
>gb|AC092453.10| Homo sapiens 12 BAC RP11-130L11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160984 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 ctcctttttaaaaactaaa 119 ||||||||||||||||||| Sbjct: 48121 ctcctttttaaaaactaaa 48103
>gb|AC007559.3| Homo sapiens BAC clone RP11-364J6 from 2, complete sequence Length = 156374 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 taagctcctttttaaaaac 115 ||||||||||||||||||| Sbjct: 29029 taagctcctttttaaaaac 29047
>gb|AC078929.27| Homo sapiens 12 BAC RP11-797M17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 107895 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 105 tttttaaaaactaaaacaa 123 ||||||||||||||||||| Sbjct: 92705 tttttaaaaactaaaacaa 92687
>gb|AC079248.5| Homo sapiens BAC clone RP11-24J11 from 2, complete sequence Length = 128535 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 105 tttttaaaaactaaaacaa 123 ||||||||||||||||||| Sbjct: 38234 tttttaaaaactaaaacaa 38216
>gb|AC007511.8|AC007511 Homo sapiens, clone RP11-84A1, complete sequence Length = 168822 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 atggaagcaatgaatcaac 65 ||||||||||||||||||| Sbjct: 136518 atggaagcaatgaatcaac 136500
>emb|BX510317.5| Zebrafish DNA sequence from clone CH211-229G14 in linkage group 9, complete sequence Length = 159458 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 tttttaaaaactaaaacaa 123 ||||||||||||||||||| Sbjct: 34684 tttttaaaaactaaaacaa 34702
>gb|AF108421.1|FRIGVH1 Fugu rubripes immunoglobulin heavy chain gene cluster, partial sequence Length = 40406 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 aataatctacaatatattt 26 ||||||||||||||||||| Sbjct: 16776 aataatctacaatatattt 16794
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 acaagagactcagggggta 82 ||||||||||||||||||| Sbjct: 2828550 acaagagactcagggggta 2828532 Score = 38.2 bits (19), Expect = 6.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 7 aaataatctacaatatattttct 29 |||||||||| |||||||||||| Sbjct: 1577270 aaataatctaaaatatattttct 1577292
>gb|AC009960.10| Homo sapiens BAC clone RP11-354N12 from 2, complete sequence Length = 207983 Score = 38.2 bits (19), Expect = 6.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 101 ctcctttttaaaaactaaaacaa 123 ||||||||||||||| ||||||| Sbjct: 21946 ctcctttttaaaaacaaaaacaa 21924
>dbj|BS000037.1| Pan troglodytes chromosome 22 clone:PTB-003F15, map 22, complete sequences Length = 142800 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 105 tttttaaaaactaaaacaa 123 ||||||||||||||||||| Sbjct: 981 tttttaaaaactaaaacaa 963
>gb|AC154480.2| Mus musculus BAC clone RP24-135M1 from 13, complete sequence Length = 171846 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 caaataatctacaatatat 24 ||||||||||||||||||| Sbjct: 169588 caaataatctacaatatat 169570
>gb|AC126797.4| Mus musculus BAC clone RP23-443F6 from 1, complete sequence Length = 192663 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 ctttttaaaaactaaaaca 122 ||||||||||||||||||| Sbjct: 42287 ctttttaaaaactaaaaca 42305
>gb|AC154719.2| Mus musculus BAC clone RP24-370O15 from 16, complete sequence Length = 163408 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 acaatatattttctgagtt 34 ||||||||||||||||||| Sbjct: 135274 acaatatattttctgagtt 135292
>emb|BX255903.3| Zebrafish DNA sequence from clone CH211-242B18 in linkage group 20, complete sequence Length = 117796 Score = 38.2 bits (19), Expect = 6.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 11 aatctacaatatattttctgagt 33 |||||||||||||||| |||||| Sbjct: 28665 aatctacaatatatttgctgagt 28687
>gb|AY111666.1| Zea mays CL56912_1 mRNA sequence Length = 810 Score = 38.2 bits (19), Expect = 6.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 34 tcataaatcaatcatggaagcaa 56 ||||| ||||||||||||||||| Sbjct: 671 tcatatatcaatcatggaagcaa 649
>gb|AF077335.1|AF077335 Arabidopsis thaliana Anthocyaninless2 (ANL2) gene, complete cds Length = 9277 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 ctttttaaaaactaaaaca 122 ||||||||||||||||||| Sbjct: 1536 ctttttaaaaactaaaaca 1554
>emb|CR628386.8| Zebrafish DNA sequence from clone CH211-241O7 in linkage group 10, complete sequence Length = 148044 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 atctacaatatattttctg 30 ||||||||||||||||||| Sbjct: 85005 atctacaatatattttctg 85023
>gb|AF128392.1|F15P23 Arabidopsis thaliana BAC F15P23 Length = 18756 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 104 ctttttaaaaactaaaaca 122 ||||||||||||||||||| Sbjct: 1563 ctttttaaaaactaaaaca 1545
>gb|AC103408.8| Mus musculus chromosome 3, clone RP23-442M1, complete sequence Length = 187860 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 ataatctacaatatatttt 27 ||||||||||||||||||| Sbjct: 129566 ataatctacaatatatttt 129584
>emb|BX005050.6| Zebrafish DNA sequence from clone CH211-11A11, complete sequence Length = 166695 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 tgagttcataaatcaatca 47 ||||||||||||||||||| Sbjct: 166061 tgagttcataaatcaatca 166079
>emb|AL935325.14| Mouse DNA sequence from clone RP23-101O16 on chromosome 4, complete sequence Length = 133845 Score = 38.2 bits (19), Expect = 6.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 5 acaaataatctacaatatatttt 27 |||||||||||| |||||||||| Sbjct: 66193 acaaataatctataatatatttt 66171
>emb|AL844544.9| Mouse DNA sequence from clone RP23-230B1 on chromosome 2, complete sequence Length = 156426 Score = 38.2 bits (19), Expect = 6.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 101 ctcctttttaaaaactaaaacaa 123 ||||||||||||||| ||||||| Sbjct: 150968 ctcctttttaaaaacaaaaacaa 150946
>gb|AC137947.12| Mus musculus chromosome 5, clone RP23-362I3, complete sequence Length = 214295 Score = 38.2 bits (19), Expect = 6.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 102 tcctttttaaaaactaaaacaag 124 ||||||||||||| ||||||||| Sbjct: 9985 tcctttttaaaaaataaaacaag 10007
>emb|AL929440.5| Mouse DNA sequence from clone RP23-292F11 on chromosome 2, complete sequence Length = 143594 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 tttttaaaaactaaaacaa 123 ||||||||||||||||||| Sbjct: 19369 tttttaaaaactaaaacaa 19387
>emb|BX005367.10| Zebrafish DNA sequence from clone DKEY-97L20 in linkage group 22, complete sequence Length = 243709 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 atctacaatatattttctg 30 ||||||||||||||||||| Sbjct: 35729 atctacaatatattttctg 35747
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 38.2 bits (19), Expect = 6.1 Identities = 25/27 (92%) Strand = Plus / Minus Query: 8 aataatctacaatatattttctgagtt 34 |||||| ||||||||||| |||||||| Sbjct: 2518490 aataatttacaatatattatctgagtt 2518464
>emb|CT571261.1| Medicago truncatula chromosome 5 clone mth2-67l4, COMPLETE SEQUENCE Length = 136545 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 tttttaaaaactaaaacaa 123 ||||||||||||||||||| Sbjct: 7754 tttttaaaaactaaaacaa 7772
>emb|CT030714.5| Mouse DNA sequence from clone RP23-223P19 on chromosome 13, complete sequence Length = 176581 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 atatattttctgagttcat 37 ||||||||||||||||||| Sbjct: 172939 atatattttctgagttcat 172921
>emb|CR391944.10| Zebrafish DNA sequence from clone CH211-95K19 in linkage group 3, complete sequence Length = 172806 Score = 38.2 bits (19), Expect = 6.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 11 aatctacaatatattttctgagt 33 |||||||||||||||| |||||| Sbjct: 148206 aatctacaatatatttgctgagt 148184
>emb|CT025555.7| Mouse DNA sequence from clone RP24-84E11 on chromosome 13, complete sequence Length = 197389 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 105 tttttaaaaactaaaacaa 123 ||||||||||||||||||| Sbjct: 181960 tttttaaaaactaaaacaa 181942
>dbj|AP001095.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-802O4, complete sequence Length = 187824 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 ctttttaaaaactaaaaca 122 ||||||||||||||||||| Sbjct: 108040 ctttttaaaaactaaaaca 108058
>gb|AC162912.5| Mus musculus BAC clone RP24-381G1 from chromosome 13, complete sequence Length = 190181 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 105 tttttaaaaactaaaacaa 123 ||||||||||||||||||| Sbjct: 83163 tttttaaaaactaaaacaa 83145
>emb|AL844839.6| Mouse DNA sequence from clone RP23-191F2 on chromosome 2, complete sequence Length = 191156 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 ctcctttttaaaaactaaa 119 ||||||||||||||||||| Sbjct: 48556 ctcctttttaaaaactaaa 48574
>emb|AL831735.10| Mouse DNA sequence from clone RP23-452D3 on chromosome 2, complete sequence Length = 193718 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 109 taaaaactaaaacaagccc 127 ||||||||||||||||||| Sbjct: 14077 taaaaactaaaacaagccc 14059
>gb|AC118274.9| Homo sapiens chromosome 15, clone RP11-265M18, complete sequence Length = 177432 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 104 ctttttaaaaactaaaaca 122 ||||||||||||||||||| Sbjct: 31114 ctttttaaaaactaaaaca 31096 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,431,649 Number of Sequences: 3902068 Number of extensions: 2431649 Number of successful extensions: 194410 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 193866 Number of HSP's gapped (non-prelim): 544 length of query: 130 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 109 effective length of database: 17,151,101,840 effective search space: 1869470100560 effective search space used: 1869470100560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)