>gb|AC124603.5| Mus musculus BAC clone RP23-52H14 from chromosome 14, complete sequence
          Length = 179891

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 240   aatcatcttttataacttataagccagtgatctat 274
             |||||||||  ||||||||||||||||| ||||||
Sbjct: 50159 aatcatcttcaataacttataagccagtaatctat 50125

>gb|U50311.1| Caenorhabditis elegans cosmid C25E10, complete sequence
          Length = 36822

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 77    ttgtatcaaatgcatatactaa 98
             ||||||||||||||||||||||
Sbjct: 25856 ttgtatcaaatgcatatactaa 25835

>gb|AC159425.1| Trypanosoma brucei chromosome 3 clone RPCI93-27F10, complete sequence
          Length = 135196

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 232    ttcgtccgaatcatcttttat 252
              |||||||||||||||||||||
Sbjct: 134315 ttcgtccgaatcatcttttat 134335

>emb|AL441964.4| Human DNA sequence from clone RP11-151G12 on chromosome X Contains a
             mortality factor 4 like 1 (MORF4L1) pseudogene and a novel
             pseudogene, complete sequence
          Length = 92775

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 348   ttgagatatattccatcacta 368
             |||||||||||||||||||||
Sbjct: 25173 ttgagatatattccatcacta 25153

>emb|AL159988.12| Human DNA sequence from clone RP11-480M11 on chromosome Xq27.1-28
             Contains a heterogeneous nuclear ribonucleoprotein C
             (C1/C2) (HNRPC) pseudogene, complete sequence
          Length = 111779

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 63    ccaatatacagaacttgtatc 83
             |||||||||||||||||||||
Sbjct: 67436 ccaatatacagaacttgtatc 67456

>emb|AL031368.2|HS662N3 Human DNA sequence from clone RP4-662N3 on chromosome Xp21.1-21.3,
             complete sequence
          Length = 143890

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 249   ttataacttataagccagtga 269
             |||||||||||||||||||||
Sbjct: 43053 ttataacttataagccagtga 43033

>emb|AL928632.13| Mouse DNA sequence from clone RP23-303M15 on chromosome 2, complete
            sequence
          Length = 217309

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 278  agcagagcaattcagggcctg 298
            |||||||||||||||||||||
Sbjct: 8194 agcagagcaattcagggcctg 8214

>gb|AC153889.19| Mus musculus 10 BAC RP23-434A12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190042

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 251    ataacttataagccagtgatctat 274
              ||||||||||||||| ||||||||
Sbjct: 181319 ataacttataagccattgatctat 181342

>gb|AC126428.3| Mus musculus BAC clone RP24-387B13 from chromosome 10, complete sequence
          Length = 225663

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 26     cagcatccataaccatatatagttccaa 53
              ||||||||| |||||| |||||||||||
Sbjct: 126169 cagcatccaaaaccatctatagttccaa 126196

>gb|AC119034.2| Homo sapiens 3 BAC RP11-303O22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 173651

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    cttcaaatatcaactgaaca 184
              ||||||||||||||||||||
Sbjct: 163160 cttcaaatatcaactgaaca 163179

>ref|XM_725889.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03021)
            partial mRNA
          Length = 2910

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 76   cttgtatcaaatgcatatactaac 99
            ||||||||||||||||||| ||||
Sbjct: 2821 cttgtatcaaatgcatataataac 2844

>emb|CR388061.11| Zebrafish DNA sequence from clone DKEY-69P22 in linkage group 5,
             complete sequence
          Length = 122069

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   aaattcacaacaatctcaat 337
             ||||||||||||||||||||
Sbjct: 75654 aaattcacaacaatctcaat 75673

>gb|AC093605.3| Homo sapiens BAC clone RP11-583P24 from 4, complete sequence
          Length = 187035

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 344    ataattgagatatattccat 363
              ||||||||||||||||||||
Sbjct: 153193 ataattgagatatattccat 153212

>gb|AC025105.10| Homo sapiens chromosome 18, clone RP11-695P1, complete sequence
          Length = 201027

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   tgatctatgtgagcagagca 286
             ||||||||||||||||||||
Sbjct: 42235 tgatctatgtgagcagagca 42254

>gb|AC154190.2| Mus musculus BAC clone RP24-465P16 from chromosome 16, complete
             sequence
          Length = 150894

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   cctgtgtgaactttagaatg 314
             ||||||||||||||||||||
Sbjct: 29308 cctgtgtgaactttagaatg 29327

>gb|AC155278.5| Mus musculus 6 BAC RP24-141E2 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 202028

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 326    aacaatctcaatttctacat 345
              ||||||||||||||||||||
Sbjct: 150885 aacaatctcaatttctacat 150866

>gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167311

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 313   tgcagaaattcacaacaatc 332
             ||||||||||||||||||||
Sbjct: 20822 tgcagaaattcacaacaatc 20803

>gb|AC107641.11| Mus musculus chromosome 7, clone RP23-54G8, complete sequence
          Length = 164725

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   acacttaaatacatatacta 128
             ||||||||||||||||||||
Sbjct: 63455 acacttaaatacatatacta 63474

>dbj|AB016875.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9D7
          Length = 60476

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 34    ataaccatatatagttccaaaatt 57
             ||||||||||||||| ||||||||
Sbjct: 57014 ataaccatatatagtgccaaaatt 56991

>emb|CT030235.12| Mouse DNA sequence from clone RP23-240F19 on chromosome 16, complete
             sequence
          Length = 236028

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   cctgtgtgaactttagaatg 314
             ||||||||||||||||||||
Sbjct: 17120 cctgtgtgaactttagaatg 17101

>emb|AL831714.14| Mouse DNA sequence from clone RP23-311D24 on chromosome 4, complete
             sequence
          Length = 120815

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   agaaattcacaacaatctca 335
             ||||||||||||||||||||
Sbjct: 23698 agaaattcacaacaatctca 23679

>dbj|AP006136.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT30K08, TM0237,
             complete sequence
          Length = 114468

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   cttcatatctcaacaaaaat 163
             ||||||||||||||||||||
Sbjct: 95556 cttcatatctcaacaaaaat 95537

>emb|AL929013.9| Zebrafish DNA sequence from clone DKEY-77O15, complete sequence
          Length = 184257

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 155    aacaaaaatccttcaaatatcaac 178
              ||||||||||||| ||||||||||
Sbjct: 158219 aacaaaaatcctttaaatatcaac 158242

>gb|AC171183.6| Mus musculus  BAC RP24-545B2 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 211697

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 251    ataacttataagccagtgatctat 274
              ||||||||||||||| ||||||||
Sbjct: 134271 ataacttataagccattgatctat 134294

>dbj|AP004371.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-535N6, complete
              sequence
          Length = 180721

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 326    aacaatctcaatttctacat 345
              ||||||||||||||||||||
Sbjct: 118533 aacaatctcaatttctacat 118514


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,363,700
Number of Sequences: 3902068
Number of extensions: 4363700
Number of successful extensions: 84470
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84418
Number of HSP's gapped (non-prelim): 52
length of query: 432
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 410
effective length of database: 17,147,199,772
effective search space: 7030351906520
effective search space used: 7030351906520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)