ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast38c01 |
|---|---|
| Clone Library Name | barley_pub |
>XTH32_ARATH (Q9SJL9) Probable xyloglucan endotransglucosylase/hydrolase protein| 32 precursor (EC 2.4.1.207) (At-XTH32) (XTH-32) Length = 299 Score = 69.3 bits (168), Expect = 4e-12 Identities = 32/57 (56%), Positives = 39/57 (68%), Gaps = 1/57 (1%) Frame = -1 Query: 437 GCGPGAPPSCRPVRASPVGTG-LTRQQYAAMRWAQQRHMVYYYCQDFRRDRSLTPEC 270 GC + C P+ ASP +G LTRQQ+ AMRW Q MVY YC+D++RD SLTPEC Sbjct: 241 GCTAYSSARCYPLSASPYRSGGLTRQQHQAMRWVQTHSMVYNYCKDYKRDHSLTPEC 297
>XTH31_ARATH (P93046) Probable xyloglucan endotransglucosylase/hydrolase protein| 31 precursor (EC 2.4.1.207) (At-XTH31) (XTH-31) (AtXTR8) Length = 293 Score = 61.6 bits (148), Expect = 8e-10 Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%) Frame = -1 Query: 437 GCGPGAPPSCRPVRASPV-GTGLTRQQYAAMRWAQQRHMVYYYCQDFRRDRSLTPEC 270 GC + SCRP +P+ GL+RQQ AA+ WAQ+ +VY YC D +RD + TPEC Sbjct: 237 GCTADSSSSCRPPSPAPMRNRGLSRQQMAALTWAQRNFLVYNYCHDPKRDHTQTPEC 293
>XTH14_ARATH (Q9ZSU4) Xyloglucan endotransglucosylase/hydrolase protein 14| precursor (EC 2.4.1.207) (At-XTH14) (XTH-14) Length = 287 Score = 40.8 bits (94), Expect = 0.001 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = -1 Query: 413 SCRPVRASPVGTGLTRQQYAAMRWAQQRHMVYYYCQDFRR-DRSLTPEC 270 +C P S + T L QY M W Q+ M+Y YC DF+R + L EC Sbjct: 237 TCEPNSNSWMWTTLNPAQYGKMMWVQRDFMIYNYCTDFKRFPQGLPKEC 285
>XTH13_ARATH (Q9FKL8) Putative xyloglucan endotransglucosylase/hydrolase protein| 13 precursor (EC 2.4.1.207) (At-XTH13) (XTH-13) Length = 284 Score = 40.4 bits (93), Expect = 0.002 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = -1 Query: 413 SCRPVRASPVGTGLTRQQYAAMRWAQQRHMVYYYCQDFRR-DRSLTPEC 270 +C S + T L QY M+W Q +M+Y YC DF+R + L EC Sbjct: 233 TCNANSNSWMWTTLNSNQYGQMKWVQDDYMIYNYCTDFKRFPQGLPTEC 281
>XTH_TOBAC (P93349) Probable xyloglucan endotransglucosylase/hydrolase protein| precursor (EC 2.4.1.207) Length = 295 Score = 39.3 bits (90), Expect = 0.004 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = -1 Query: 362 QYAAMRWAQQRHMVYYYCQDFRRDRSLTPEC 270 QY +RW +Q++ +Y YC D +R +L PEC Sbjct: 259 QYRRLRWVRQKYTIYNYCTDRKRYPTLPPEC 289
>XTH_WHEAT (Q41542) Probable xyloglucan endotransglucosylase/hydrolase| precursor (EC 2.4.1.207) Length = 293 Score = 36.6 bits (83), Expect = 0.028 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -1 Query: 374 LTRQQYAAMRWAQQRHMVYYYCQDFRRDRSLTPEC 270 L QY + W ++ H +Y YC D R ++ PEC Sbjct: 253 LDAAQYRRLAWVRKEHTIYNYCTDHDRYAAMAPEC 287
>XTH12_ARATH (Q9FKL9) Probable xyloglucan endotransglucosylase/hydrolase protein| 12 precursor (EC 2.4.1.207) (At-XTH12) (XTH-12) Length = 285 Score = 36.6 bits (83), Expect = 0.028 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = -1 Query: 413 SCRPVRASPVGTGLTRQQYAAMRWAQQRHMVYYYCQDFRR-DRSLTPEC 270 +C S + T L Q ++W Q+ +M+Y YC DF+R + L EC Sbjct: 234 TCNANSNSWMWTTLNSNQLGQLKWVQKDYMIYNYCTDFKRFPQGLPTEC 282
>S35B1_XENTR (Q8AXS6) Solute carrier family 35 member B1| Length = 323 Score = 36.2 bits (82), Expect = 0.036 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Frame = -1 Query: 248 GGRGARVLINFVGVFACYSYYGYGAPTTSSYTLLLLFG-SENGKRVKGVAALPLLECL 78 G GAR+L+ F+GVF CY YYG T + T +G E ++ + +L ++C+ Sbjct: 8 GSGGARLLVCFLGVFVCYFYYGILQETITRGT----YGEGEKQEKFRFALSLVFVQCI 61
>XTH10_ARATH (Q9ZVK1) Probable xyloglucan endotransglucosylase/hydrolase protein| 10 precursor (EC 2.4.1.207) (At-XTH10) (XTH-10) Length = 299 Score = 35.4 bits (80), Expect = 0.062 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 380 TGLTRQQYAAMRWAQQRHMVYYYCQDFRR-DRSLTPEC 270 + LTR Q +W ++ H++Y YCQD+ R + L EC Sbjct: 257 SSLTRVQKRWFKWVRKYHLIYDYCQDYGRFNNKLPKEC 294
>XTH33_ARATH (Q8LC45) Probable xyloglucan endotransglucosylase/hydrolase protein| 33 precursor (EC 2.4.1.207) (At-XTH33) (XTH-33) Length = 310 Score = 35.4 bits (80), Expect = 0.062 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 5/61 (8%) Frame = -1 Query: 437 GCGP-----GAPPSCRPVRASPVGTGLTRQQYAAMRWAQQRHMVYYYCQDFRRDRSLTPE 273 G GP G+ S PV T L++ Q AM WA+++ M Y YC D R + + E Sbjct: 250 GSGPCTKSGGSISSLDPVDGQDFAT-LSKNQINAMDWARRKLMFYSYCSDKPRYKVMPAE 308 Query: 272 C 270 C Sbjct: 309 C 309
>XTH15_ARATH (Q38911) Probable xyloglucan endotransglucosylase/hydrolase protein| 15 precursor (EC 2.4.1.207) (At-XTH15) (XTH-15) Length = 289 Score = 34.7 bits (78), Expect = 0.11 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = -1 Query: 386 VGTGLTRQQYAAMRWAQQRHMVYYYCQDFRR-DRSLTPEC 270 V T L +RW Q+ M+Y YC D +R R PEC Sbjct: 245 VATELNAYGRRRLRWVQKYFMIYNYCSDLKRFPRGFPPEC 284
>XTH1_LYCES (Q40144) Probable xyloglucan endotransglucosylase/hydrolase 1| precursor (EC 2.4.1.207) (LeXTH1) Length = 296 Score = 34.7 bits (78), Expect = 0.11 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -1 Query: 362 QYAAMRWAQQRHMVYYYCQDFRRDRSLTPEC 270 QY +RW +Q++ VY YC D R PEC Sbjct: 260 QYRRLRWVRQKYTVYNYCTDKARYPVPPPEC 290
>XTH21_ARATH (Q9ZV40) Probable xyloglucan endotransglucosylase/hydrolase protein| 21 precursor (EC 2.4.1.207) (At-XTH21) (XTH-21) Length = 305 Score = 34.3 bits (77), Expect = 0.14 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%) Frame = -1 Query: 434 CGPGAPPSCRPVRASPVGT--GLTRQQYAAMRWAQQRHMVYYYCQDFRR-DRSLTPEC*A 264 C PG S S + G+ +RW Q++ MVY YC+D +R L EC A Sbjct: 239 CSPGDSTSSSSSSTSEWFSQRGMDSSSKKVLRWVQRKFMVYNYCKDKKRFSNGLPVECTA 298 Query: 263 RER 255 + + Sbjct: 299 KNK 301
>XTHB_PHAAN (Q8LNZ5) Probable xyloglucan endotransglucosylase/hydrolase protein| B precursor (EC 2.4.1.207) (VaXTH2) Length = 293 Score = 33.5 bits (75), Expect = 0.24 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -1 Query: 362 QYAAMRWAQQRHMVYYYCQDFRRDRSLTPEC 270 Q+ ++W +Q+ +Y YC D R L PEC Sbjct: 257 QWRRLKWVRQKFTIYNYCTDRTRYPQLPPEC 287
>S35B1_XENLA (Q6GQ70) Solute carrier family 35 member B1 (Endoplasmic reticulum| nucleotide sugar transporter 1) Length = 320 Score = 33.1 bits (74), Expect = 0.31 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = -1 Query: 239 GARVLINFVGVFACYSYYGYGAPTTSSYTLLLLFG-SENGKRVKGVAALPLLECL 78 G R+L+ F+GVF CY YYG T + T +G E ++ + +L ++C+ Sbjct: 9 GLRLLVCFLGVFVCYFYYGILQETITRRT----YGEGEKQEKFRFALSLVFVQCI 59
>XTH20_ARATH (Q9FI31) Probable xyloglucan endotransglucosylase/hydrolase protein| 20 precursor (EC 2.4.1.207) (At-XTH20) (XTH-20) Length = 282 Score = 33.1 bits (74), Expect = 0.31 Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = -1 Query: 350 MRWAQQRHMVYYYCQDFRR-DRSLTPEC 270 ++WAQ+++MVY YC D +R + PEC Sbjct: 254 VKWAQRKYMVYNYCTDKKRFPQGAPPEC 281
>XTH28_ARATH (Q38909) Probable xyloglucan endotransglucosylase/hydrolase protein| 28 precursor (EC 2.4.1.207) (At-XTH28) (XTH-28) Length = 332 Score = 33.1 bits (74), Expect = 0.31 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Frame = -1 Query: 416 PSCRP--VRASPVGTGLTRQQYAAMRWAQQRHMVYYYCQDFRRDRSLTPEC 270 PSC+ V+ + + +T Q M +Q+HM Y YC D R + + EC Sbjct: 240 PSCKDEAVQNLRLASEITESQRNKMEIFRQKHMTYSYCYDHMRYKVVLSEC 290
>XTH5_ARATH (Q9XIW1) Probable xyloglucan endotransglucosylase/hydrolase protein| 5 precursor (EC 2.4.1.207) (At-XTH5) (XTH-5) Length = 293 Score = 32.7 bits (73), Expect = 0.40 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -1 Query: 374 LTRQQYAAMRWAQQRHMVYYYCQDFRRDRSLTPEC 270 L QY ++W ++R+ +Y YC D R PEC Sbjct: 253 LDANQYKRLKWVRKRYTIYNYCTDRVRFPVPPPEC 287
>XTH_SOYBN (Q39857) Probable xyloglucan endotransglucosylase/hydrolase| precursor (EC 2.4.1.207) (Fragment) Length = 295 Score = 32.7 bits (73), Expect = 0.40 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = -1 Query: 374 LTRQQYAAMRWAQQRHMVYYYCQDFRRDRSLT-PEC 270 L Q+ +RW +Q++ +Y YC D +R ++ PEC Sbjct: 254 LDAAQWRRLRWVRQKYTIYNYCTDTKRYPHISPPEC 289
>XTHA_PHAAN (Q41638) Xyloglucan endotransglucosylase/hydrolase protein A| precursor (EC 2.4.1.207) (VaXTH1) Length = 292 Score = 32.3 bits (72), Expect = 0.52 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = -1 Query: 374 LTRQQYAAMRWAQQRHMVYYYCQDFRRDRSLTPEC 270 L Q+ + W + ++ +Y YC D +R + PEC Sbjct: 252 LDAAQWQKLAWVRNKYTIYNYCTDRKRYSQVPPEC 286
>XTH22_ARATH (Q38857) Xyloglucan endotransglucosylase/hydrolase protein 22| precursor (EC 2.4.1.207) (At-XTH22) (XTH-22) (Touch protein 4) Length = 284 Score = 32.3 bits (72), Expect = 0.52 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -1 Query: 350 MRWAQQRHMVYYYCQDFRR-DRSLTPEC 270 MRW Q+ +M+Y YC D +R + L EC Sbjct: 254 MRWVQRNYMIYNYCTDAKRFPQGLPKEC 281
>XTH16_ARATH (Q8LG58) Probable xyloglucan endotransglucosylase/hydrolase protein| 16 precursor (EC 2.4.1.207) (At-XTH16) (XTH-16) Length = 291 Score = 32.0 bits (71), Expect = 0.68 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Frame = -1 Query: 392 SPVGTGLTRQQYAAMRWAQQRHMVYYYCQDFRR-DRSLTPEC 270 S V L +RW Q+ M+Y YC D +R + PEC Sbjct: 245 SQVANELNAYGRRRLRWVQKYFMIYDYCSDLKRFPQGFPPEC 286
>XTH7_ARATH (Q8LER3) Probable xyloglucan endotransglucosylase/hydrolase protein| 7 precursor (EC 2.4.1.207) (At-XTH7) (XTH-7) Length = 293 Score = 32.0 bits (71), Expect = 0.68 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 5/61 (8%) Frame = -1 Query: 437 GCGPGAPPSCRPVRASPVGTGLTRQQYAAM-----RWAQQRHMVYYYCQDFRRDRSLTPE 273 GC P C P + G Q + + RW + HMVY YC D R PE Sbjct: 230 GCPVPGPADC-PANSKNWWEGSAYHQLSPVEARSYRWVRVNHMVYDYCTDKSRFPVPPPE 288 Query: 272 C 270 C Sbjct: 289 C 289
>XTH30_ARATH (Q38908) Probable xyloglucan endotransglucosylase/hydrolase protein| 30 precursor (EC 2.4.1.207) (At-XTH30) (XTH-30) Length = 343 Score = 32.0 bits (71), Expect = 0.68 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = -1 Query: 380 TGLTRQQYAAMRWAQQRHMVYYYCQDFRRDRSLTPEC 270 + + Q AAMR +QR M Y YC D R PEC Sbjct: 257 SSINSHQRAAMRRFRQRFMYYSYCYDTLRYPEPLPEC 293
>XTH23_ARATH (Q38910) Probable xyloglucan endotransglucosylase/hydrolase protein| 23 precursor (EC 2.4.1.207) (At-XTH23) (XTH-23) Length = 286 Score = 31.6 bits (70), Expect = 0.89 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%) Frame = -1 Query: 350 MRWAQQRHMVYYYCQDFRR-DRSLTPEC 270 MRW Q +M+Y YC D +R + L EC Sbjct: 256 MRWVQNNYMIYNYCTDAKRFPQGLPREC 283
>XTH24_ARATH (P24806) Xyloglucan endotransglucosylase/hydrolase protein 24| precursor (EC 2.4.1.207) (At-XTH24) (XTH-24) (Meristem protein 5) (MERI-5 protein) (MERI5 protein) (Endo-xyloglucan transferase) (Xyloglucan endo-1,4-beta-D-glucanase) Length = 269 Score = 31.2 bits (69), Expect = 1.2 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -1 Query: 356 AAMRWAQQRHMVYYYCQDFRR 294 A ++W Q+ +M+Y YC D RR Sbjct: 236 ARLKWVQKNYMIYNYCTDHRR 256
>XTH6_ARATH (Q8LF99) Probable xyloglucan endotransglucosylase/hydrolase protein| 6 precursor (EC 2.4.1.207) (At-XTH6) (XTH-6) Length = 292 Score = 30.8 bits (68), Expect = 1.5 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = -1 Query: 347 RWAQQRHMVYYYCQDFRRDRSLTPEC 270 RW + HMVY YC D R PEC Sbjct: 265 RWVRVNHMVYDYCTDRSRFPVPPPEC 290
>BLNK_MOUSE (Q9QUN3) B-cell linker protein (Cytoplasmic adapter protein)| (B-cell adapter containing SH2 domain protein) (B-cell adapter containing Src homology 2 domain protein) (Src homology 2 domain-containing leukocyte protein of 65 kDa) (Slp-65) (Lymp Length = 457 Score = 30.8 bits (68), Expect = 1.5 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = +2 Query: 71 PQAGIPAAVGQPHPLLF-SHFPNQKEEAKCRSWW*EHRNRSRSNKQTHRRN*SG 229 P+AG PAA G H F S F +Q+ E + W+ +R + + HR N G Sbjct: 315 PEAGSPAADGPFHSFPFNSTFADQEAELLGKPWYAGACDRKSAEEALHRSNKDG 368
>S35B1_CHICK (Q8AWB6) Solute carrier family 35 member B1 (Endoplasmic reticulum| nucleotide sugar transporter 1) Length = 325 Score = 30.4 bits (67), Expect = 2.0 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -1 Query: 266 ARERTNGGRGARVLINFVGVFACYSYYG 183 A R+ R+ + F+GVFACY YYG Sbjct: 5 AGRRSRSPERLRLPVCFLGVFACYFYYG 32
>BRU1_SOYBN (P35694) Brassinosteroid-regulated protein BRU1 precursor| Length = 283 Score = 30.4 bits (67), Expect = 2.0 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%) Frame = -1 Query: 350 MRWAQQRHMVYYYCQDFRR-DRSLTPEC 270 +RW Q+ M+Y YC D +R + L EC Sbjct: 254 LRWVQKYFMIYNYCSDLKRFPQGLPAEC 281
>XTH19_ARATH (Q9M0D1) Probable xyloglucan endotransglucosylase/hydrolase protein| 19 precursor (EC 2.4.1.207) (At-XTH19) (XTH-19) Length = 277 Score = 30.4 bits (67), Expect = 2.0 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -1 Query: 350 MRWAQQRHMVYYYCQDFRR-DRSLTPEC 270 M+ Q ++MVY YC D +R R + PEC Sbjct: 249 MKGVQSKYMVYNYCSDKKRFPRGVPPEC 276
>XTH_BRAOB (Q6YDN9) Xyloglucan endotransglucosylase/hydrolase precursor (EC| 2.4.1.207) (BobXET16A) Length = 295 Score = 30.0 bits (66), Expect = 2.6 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = -1 Query: 374 LTRQQYAAMRWAQQRHMVYYYCQDFRRDRSLTPEC 270 L +QY ++W + + +Y YC D R + EC Sbjct: 255 LDAEQYRRLKWVRMKWTIYNYCTDRTRFPVMPAEC 289
>XTH29_ARATH (Q8L7H3) Probable xyloglucan endotransglucosylase/hydrolase protein| 29 precursor (EC 2.4.1.207) (At-XTH29) (XTH-29) Length = 357 Score = 29.6 bits (65), Expect = 3.4 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -1 Query: 374 LTRQQYAAMRWAQQRHMVYYYCQDFRRDRSLTPEC 270 ++ +Q AMR ++R+M Y YC D R PEC Sbjct: 278 ISPKQATAMRRFRERYMYYSYCYDTIRYSVPPPEC 312
>XTH18_ARATH (Q9M0D2) Probable xyloglucan endotransglucosylase/hydrolase protein| 18 precursor (EC 2.4.1.207) (At-XTH18) (XTH-18) Length = 282 Score = 29.3 bits (64), Expect = 4.4 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Frame = -1 Query: 437 GCGPGAPPSCRPVRASPVGTGLTRQQYAAMRWAQQRHMVYYYCQDFRR-DRSLTPEC 270 GC S P +S L M+ Q ++MVY YC D RR R + EC Sbjct: 225 GCVWANGKSSCPANSSWFTQQLDSNGQTRMKGVQSKYMVYNYCNDKRRFPRGVPVEC 281
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 29.3 bits (64), Expect = 4.4 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +2 Query: 26 GNMPTTNASTTGLAQPQAGIPAAVGQP 106 GN P T+ +TG+A+PQA P +P Sbjct: 215 GNNPFTSGGSTGMARPQAPRPGGAPRP 241
>ATOE_HAEIN (P44051) Short-chain fatty acids transporter| Length = 447 Score = 29.3 bits (64), Expect = 4.4 Identities = 16/54 (29%), Positives = 26/54 (48%) Frame = -1 Query: 230 VLINFVGVFACYSYYGYGAPTTSSYTLLLLFGSENGKRVKGVAALPLLECLPVA 69 VL+ F+G AC +G+G + +F E +R+KG L+ C +A Sbjct: 99 VLVTFMGSIACIINWGFGLVVGA------MFAKEVARRIKGSDYALLIACAYIA 146
>LNT_PSESM (Q87VX7) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP| N-acyltransferase) Length = 506 Score = 29.3 bits (64), Expect = 4.4 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Frame = -1 Query: 200 CYSYYGYGAPTTSSYTLLLLFGSENGK-----RVKGVAALPLLECLPVAELGRWLRR 45 CY + YGA T+ Y + +G + + +AA+ L LP RWLRR Sbjct: 60 CYGFGLYGAGTSWIYVSIHTYGGASALLAGLLMLLFIAAIALFFALPAWVWARWLRR 116
>XTH26_ARATH (Q9SVV2) Putative xyloglucan endotransglucosylase/hydrolase protein| 26 precursor (EC 2.4.1.207) (At-XTH26) (XTH-26) Length = 292 Score = 28.9 bits (63), Expect = 5.8 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = -1 Query: 392 SPVGTGLTRQQYAAMRWAQQRHMVYYYCQDFRRDRS-LTPEC 270 SP + LT Q M+ + M+Y YC+D R + + PEC Sbjct: 246 SPSFSQLTASQLTKMQKIRDGFMIYDYCKDTNRFKGVMPPEC 287
>HAIR_MOUSE (Q61645) Protein hairless| Length = 1182 Score = 28.5 bits (62), Expect = 7.6 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Frame = +1 Query: 322 TMWRC--CAHRIAAYCCRVSPVPTGDARTGRHE 414 T WRC C+HR+ C R++ +TG E Sbjct: 605 THWRCSHCSHRLCVACGRIAGAGKNREKTGSQE 637
>HAIR_RAT (P97609) Protein hairless| Length = 1181 Score = 28.5 bits (62), Expect = 7.6 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Frame = +1 Query: 322 TMWRC--CAHRIAAYCCRVSPVPTGDARTGRHE 414 T WRC C+HR+ C R++ +TG E Sbjct: 604 THWRCSHCSHRLCVACGRIAGAGKNREKTGSRE 636
>XTH8_ARATH (Q8L9A9) Probable xyloglucan endotransglucosylase/hydrolase protein| 8 precursor (EC 2.4.1.207) (At-XTH8) (XTH-8) Length = 292 Score = 28.5 bits (62), Expect = 7.6 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -1 Query: 374 LTRQQYAAMRWAQQRHMVYYYCQDFRRDRSLTPEC 270 L++ Q W Q+ +VY YC+D R +L EC Sbjct: 252 LSKTQKMDYAWVQRNLVVYDYCKDSERFPTLPWEC 286
>YJO6_SCHPO (Q96WU9) Very hypothetical protein PB16A4.06c in chromosome III| Length = 126 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = -1 Query: 263 RERTNGGRGARVLINFVGVFACYSYYGYGAPTTSSYTLLLLFGSEN 126 R R++G +G R L + F +YYG G TT + L GS++ Sbjct: 53 RSRSHGPQGRRSLEHDNQFFNSRTYYGNGGNTTDTEALQKSVGSQS 98
>XTH4_ARATH (Q39099) Xyloglucan endotransglucosylase/hydrolase protein 4| precursor (EC 2.4.1.207) (At-XTH4) (XTH-4) Length = 296 Score = 28.1 bits (61), Expect = 9.9 Identities = 10/35 (28%), Positives = 18/35 (51%) Frame = -1 Query: 374 LTRQQYAAMRWAQQRHMVYYYCQDFRRDRSLTPEC 270 L +Q+ ++W + + +Y YC D R + EC Sbjct: 256 LDAEQWRRLKWVRMKWTIYNYCTDRTRFPVMPAEC 290
>RK2_CHLVU (P56367) Chloroplast 50S ribosomal protein L2| Length = 275 Score = 28.1 bits (61), Expect = 9.9 Identities = 13/40 (32%), Positives = 17/40 (42%) Frame = +2 Query: 119 FSHFPNQKEEAKCRSWW*EHRNRSRSNKQTHRRN*SGHAR 238 FS ++K E SWW + R+ T R GH R Sbjct: 21 FSEITHKKPEKALTSWWSRSKGRNNRGIITSRHRGGGHKR 60
>RBM12_MACMU (Q8SQ27) RNA-binding protein 12 (RNA-binding motif protein 12)| (SH3/WW domain anchor protein in the nucleus) (SWAN) Length = 932 Score = 28.1 bits (61), Expect = 9.9 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 41 TNASTTGLAQPQAGIPAAVGQPHPLL 118 T+A G P AGIP+A G+ H L Sbjct: 683 TSAGLPGAGMPSAGIPSAGGEEHAFL 708
>RBM12_HUMAN (Q9NTZ6) RNA-binding protein 12 (RNA-binding motif protein 12)| (SH3/WW domain anchor protein in the nucleus) (SWAN) Length = 932 Score = 28.1 bits (61), Expect = 9.9 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 41 TNASTTGLAQPQAGIPAAVGQPHPLL 118 T+A G P AGIP+A G+ H L Sbjct: 683 TSAGLPGAGMPSAGIPSAGGEEHAFL 708 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,784,770 Number of Sequences: 219361 Number of extensions: 1119052 Number of successful extensions: 3458 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 3339 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3455 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
